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Search of human proteins with 42558258
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|42558258 F-box protein 33 [Homo sapiens]
(555 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|42558258 F-box protein 33 [Homo sapiens] 1108 0.0
gi|148922963 F-box and leucine-rich repeat protein 21 [Homo sapi... 50 5e-06
gi|16306584 F-box and leucine-rich repeat protein 3 [Homo sapiens] 44 5e-04
gi|15812196 F-box only protein 24 isoform 1 [Homo sapiens] 42 0.001
gi|11024696 F-box only protein 24 isoform 2 [Homo sapiens] 42 0.001
gi|61742136 F-box and leucine-rich repeat protein 6 isoform 2 [H... 39 0.012
gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [H... 39 0.012
gi|8923179 F-box and leucine-rich repeat protein 12 [Homo sapiens] 38 0.021
gi|30795117 F-box only protein, helicase, 18 isoform 1 [Homo sap... 38 0.028
gi|30795119 F-box only protein, helicase, 18 isoform 2 [Homo sap... 38 0.028
gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens] 37 0.047
gi|208431817 protein kinase-like protein SgK493 [Homo sapiens] 37 0.062
gi|157743247 F-box protein 45 [Homo sapiens] 36 0.081
gi|23397500 F-box protein 39 [Homo sapiens] 36 0.11
gi|16306595 S-phase kinase-associated protein 2 isoform 1 [Homo ... 35 0.14
gi|14249170 S-phase kinase-associated protein 2 isoform 2 [Homo ... 35 0.14
gi|22748931 F-box and leucine-rich repeat protein 14 [Homo sapiens] 35 0.18
gi|30089926 F-box only protein 11 isoform 1 [Homo sapiens] 35 0.24
gi|30089924 F-box only protein 11 isoform 2 [Homo sapiens] 35 0.24
gi|30089922 F-box only protein 11 isoform 3 [Homo sapiens] 35 0.24
gi|88196790 coiled-coil domain containing 88 [Homo sapiens] 35 0.24
gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [H... 34 0.31
gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [H... 34 0.31
gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [H... 34 0.31
gi|22547149 F-box only protein 22 isoform a [Homo sapiens] 34 0.31
gi|13443000 F-box only protein 22 isoform b [Homo sapiens] 34 0.31
gi|27734755 F-box and leucine-rich repeat protein 20 [Homo sapiens] 33 0.68
gi|16306582 F-box and leucine-rich repeat protein 2 [Homo sapiens] 33 0.68
gi|55749804 aminopeptidase Fxna [Homo sapiens] 33 0.89
gi|239752392 PREDICTED: hypothetical protein XP_002348220 [Homo ... 32 2.0
>gi|42558258 F-box protein 33 [Homo sapiens]
Length = 555
Score = 1108 bits (2866), Expect = 0.0
Identities = 555/555 (100%), Positives = 555/555 (100%)
Query: 1 MLLFLSVPQPRPPGARTRAGAARVARWRRLRLQQLRRLRGLLRVLRGRPGAGSRRRGRMA 60
MLLFLSVPQPRPPGARTRAGAARVARWRRLRLQQLRRLRGLLRVLRGRPGAGSRRRGRMA
Sbjct: 1 MLLFLSVPQPRPPGARTRAGAARVARWRRLRLQQLRRLRGLLRVLRGRPGAGSRRRGRMA 60
Query: 61 LCGQAAGAASLPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQLRICLRVSPA 120
LCGQAAGAASLPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQLRICLRVSPA
Sbjct: 61 LCGQAAGAASLPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQLRICLRVSPA 120
Query: 121 EQPRLEFLMRKCGWFVRELRVEFAAENYLSGGGPGDGGGADTGTGGEEVEALQLSARWLE 180
EQPRLEFLMRKCGWFVRELRVEFAAENYLSGGGPGDGGGADTGTGGEEVEALQLSARWLE
Sbjct: 121 EQPRLEFLMRKCGWFVRELRVEFAAENYLSGGGPGDGGGADTGTGGEEVEALQLSARWLE 180
Query: 181 VLRTYLELVLCVLVSIRNNRNLQKFSLFGDISVLQQQGSLSNTYLSKVDPDGKKIKQIQQ 240
VLRTYLELVLCVLVSIRNNRNLQKFSLFGDISVLQQQGSLSNTYLSKVDPDGKKIKQIQQ
Sbjct: 181 VLRTYLELVLCVLVSIRNNRNLQKFSLFGDISVLQQQGSLSNTYLSKVDPDGKKIKQIQQ 240
Query: 241 LFEEILSNSRQLKWLSCGFMLEIVTPTSLSSLSNAVANTMEHLSLLDNNIPGNSTLITAV 300
LFEEILSNSRQLKWLSCGFMLEIVTPTSLSSLSNAVANTMEHLSLLDNNIPGNSTLITAV
Sbjct: 241 LFEEILSNSRQLKWLSCGFMLEIVTPTSLSSLSNAVANTMEHLSLLDNNIPGNSTLITAV 300
Query: 301 ELERFVNLHSLALDFCDFTAEMARVLTDSNHVPLQRLSLLVHNVSVMHKSLDNMPNDEHW 360
ELERFVNLHSLALDFCDFTAEMARVLTDSNHVPLQRLSLLVHNVSVMHKSLDNMPNDEHW
Sbjct: 301 ELERFVNLHSLALDFCDFTAEMARVLTDSNHVPLQRLSLLVHNVSVMHKSLDNMPNDEHW 360
Query: 361 KALSRKSTSFRVYIMAFDIKSEDMLKILKPSIPLERIHFDSYITCVSGAIVDLISRQYDK 420
KALSRKSTSFRVYIMAFDIKSEDMLKILKPSIPLERIHFDSYITCVSGAIVDLISRQYDK
Sbjct: 361 KALSRKSTSFRVYIMAFDIKSEDMLKILKPSIPLERIHFDSYITCVSGAIVDLISRQYDK 420
Query: 421 FLTHFILMNDVIDTSGFPDLSDNRNEDPLVLLAWRCTKLSLLAIHGYTVWAHNLIAIARL 480
FLTHFILMNDVIDTSGFPDLSDNRNEDPLVLLAWRCTKLSLLAIHGYTVWAHNLIAIARL
Sbjct: 421 FLTHFILMNDVIDTSGFPDLSDNRNEDPLVLLAWRCTKLSLLAIHGYTVWAHNLIAIARL 480
Query: 481 RGSDLKVLEVTEESIDFDQGELADQDVDPVHNLIEQVSLGLGQPWHAVMDIESLSVFTEP 540
RGSDLKVLEVTEESIDFDQGELADQDVDPVHNLIEQVSLGLGQPWHAVMDIESLSVFTEP
Sbjct: 481 RGSDLKVLEVTEESIDFDQGELADQDVDPVHNLIEQVSLGLGQPWHAVMDIESLSVFTEP 540
Query: 541 NRHFYREMQSFSEDI 555
NRHFYREMQSFSEDI
Sbjct: 541 NRHFYREMQSFSEDI 555
>gi|148922963 F-box and leucine-rich repeat protein 21 [Homo
sapiens]
Length = 434
Score = 50.1 bits (118), Expect = 5e-06
Identities = 66/263 (25%), Positives = 105/263 (39%), Gaps = 26/263 (9%)
Query: 265 TPTSLSSLSNAVANTMEHLSLLD-NNIPGNSTLITAVELERFVNLHSLALDFCDFTAEMA 323
TP SL VAN + L L ++ P S+ +R L LAL++ T E+
Sbjct: 188 TPVDDPSLKILVANNSDTLRLPKMSSCPHVSSDGILCVADRCQGLRELALNYYILTDELF 247
Query: 324 RVLTDSNHVPLQRLSLLVHNVSVMHKSLDNMPNDEH-WKALSRKSTSFRVYIMAFDIKSE 382
L+ HV L+ L + V VS + +H W AL + S V +M F + E
Sbjct: 248 LALSSETHVNLEHLRIDV--VSENPGQIKFHAVKKHSWDALIKHSPRVNV-VMHFFLYEE 304
Query: 383 DMLKILKPSIPLERIHFDSYITCVSGAIVDLISRQYDKFLTHFILMNDVIDTSGFPDLSD 442
+ K P+ ++F VS ++ + + + + ND+
Sbjct: 305 EFETFFKEETPVTHLYFG---RSVSKVVLGRVGLNCPRLIELVVCANDL----------- 350
Query: 443 NRNEDPLVLLAWRCTKLSLLAIHGYTVWAHNLIAIARLRGSDLKVLEVTEESIDFDQGEL 502
++ L+ +A CT L+ L + V I RL L L V EE + D+
Sbjct: 351 QPLDNELICIAEHCTNLTALGLSKCEVSCSAFIRFVRLCERRLTQLSVMEEVLIPDE--- 407
Query: 503 ADQDVDPVHNLIEQVSLGLGQPW 525
D +D +H +VS LG+ W
Sbjct: 408 -DYSLDEIHT---EVSKYLGRVW 426
Score = 38.1 bits (87), Expect = 0.021
Identities = 18/49 (36%), Positives = 24/49 (48%)
Query: 70 SLPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQLRICLRVS 118
SLP +++ IF +LP DR AS+ C W E LW + L S
Sbjct: 44 SLPHHVVLQIFQYLPLLDRACASSVCRRWNEVFHISDLWRKFEFELNQS 92
>gi|16306584 F-box and leucine-rich repeat protein 3 [Homo sapiens]
Length = 428
Score = 43.5 bits (101), Expect = 5e-04
Identities = 60/262 (22%), Positives = 106/262 (40%), Gaps = 24/262 (9%)
Query: 265 TPTSLSSLSNAVANTMEHLSLLD-NNIPGNSTLITAVELERFVNLHSLALDFCDFTAEMA 323
TP SL VAN + L LL ++ P S ++ L LAL++ + E+
Sbjct: 182 TPVDDPSLKVLVANNSDTLKLLKMSSCPHVSPAGILCVADQCHGLRELALNYHLLSDELL 241
Query: 324 RVLTDSNHVPLQRLSLLVHNVSVMHKSLDNMPNDEHWKALSRKSTSFRVYIMAFDIKSED 383
L+ HV L+ L + V + + + W A R S + +M F + E+
Sbjct: 242 LALSSEKHVRLEHLRIDVVSENPGQTHFHTIQKSS-WDAFIRHSPKVNL-VMYFFLYEEE 299
Query: 384 MLKILKPSIPLERIHFDSYITCVSGAIVDLISRQYDKFLTHFILMNDVIDTSGFPDLSDN 443
+ IP ++F ++ D++ R +T L+ V+ +G L
Sbjct: 300 FDPFFRYEIPATHLYFGRSVS------KDVLGR---VGMTCPRLVELVVCANGLRPL--- 347
Query: 444 RNEDPLVLLAWRCTKLSLLAIHGYTVWAHNLIAIARLRGSDLKVLEVTEESIDFDQGELA 503
++ L+ +A RC LS + + V + ++ G L L + EE + DQ
Sbjct: 348 --DEELIRIAERCKNLSAIGLGECEVSCSAFVEFVKMCGGRLSQLSIMEEVLIPDQ---- 401
Query: 504 DQDVDPVHNLIEQVSLGLGQPW 525
++ +H +VS LG+ W
Sbjct: 402 KYSLEQIH---WEVSKHLGRVW 420
Score = 37.4 bits (85), Expect = 0.036
Identities = 15/45 (33%), Positives = 23/45 (51%)
Query: 64 QAAGAASLPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALW 108
Q +L ++I+ +F +LP DR AS C +W + P LW
Sbjct: 32 QTCDWGNLLQDIILQVFKYLPLLDRAHASQVCRNWNQVFHMPDLW 76
>gi|15812196 F-box only protein 24 isoform 1 [Homo sapiens]
Length = 580
Score = 42.4 bits (98), Expect = 0.001
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 11/85 (12%)
Query: 43 RVLRGRPGAGSR-----RRGRMALCGQAAGAASLPSELIVHIFSFLPAPDRLRASASCSH 97
RV R P GS +RG+ G P EL+ HI SFLP D + +C +
Sbjct: 13 RVKRSCPSCGSELGVEEKRGK----GNPISIQLFPPELVEHIISFLPVRDLVALGQTCRY 68
Query: 98 WRECLFYPALWPQLRICLRVSPAEQ 122
+ E +W RIC R+SP Q
Sbjct: 69 FHEVCDGEGVW--RRICRRLSPRLQ 91
>gi|11024696 F-box only protein 24 isoform 2 [Homo sapiens]
Length = 318
Score = 42.4 bits (98), Expect = 0.001
Identities = 29/85 (34%), Positives = 38/85 (44%), Gaps = 11/85 (12%)
Query: 43 RVLRGRPGAGSR-----RRGRMALCGQAAGAASLPSELIVHIFSFLPAPDRLRASASCSH 97
RV R P GS +RG+ G P EL+ HI SFLP D + +C +
Sbjct: 13 RVKRSCPSCGSELGVEEKRGK----GNPISIQLFPPELVEHIISFLPVRDLVALGQTCRY 68
Query: 98 WRECLFYPALWPQLRICLRVSPAEQ 122
+ E +W RIC R+SP Q
Sbjct: 69 FHEVCDGEGVW--RRICRRLSPRLQ 91
>gi|61742136 F-box and leucine-rich repeat protein 6 isoform 2 [Homo
sapiens]
Length = 533
Score = 38.9 bits (89), Expect = 0.012
Identities = 33/113 (29%), Positives = 41/113 (36%), Gaps = 5/113 (4%)
Query: 1 MLLFLSVPQPRPPGARTRAGAARVARWRRLRLQQLRRLRGLLRVLRGRPGAGSRRRGRMA 60
MLL LS P P P A+ RA + R + GL P
Sbjct: 45 MLLVLSEPGPARPRAQRRASRRTPRQPPRGPSAAAKPKAGLRSEAAAAPAPAPAPTPTPE 104
Query: 61 LCGQAAGAASLPSELIVHIFSFL-----PAPDRLRASASCSHWRECLFYPALW 108
A +P E++V IF L P P RA+ C W+E PALW
Sbjct: 105 EGPDAGWGDRIPLEILVQIFGLLVAADGPMPFLGRAARVCRRWQEAASQPALW 157
>gi|16306576 F-box and leucine-rich repeat protein 6 isoform 1 [Homo
sapiens]
Length = 539
Score = 38.9 bits (89), Expect = 0.012
Identities = 33/113 (29%), Positives = 41/113 (36%), Gaps = 5/113 (4%)
Query: 1 MLLFLSVPQPRPPGARTRAGAARVARWRRLRLQQLRRLRGLLRVLRGRPGAGSRRRGRMA 60
MLL LS P P P A+ RA + R + GL P
Sbjct: 45 MLLVLSEPGPARPRAQRRASRRTPRQPPRGPSAAAKPKAGLRSEAAAAPAPAPAPTPTPE 104
Query: 61 LCGQAAGAASLPSELIVHIFSFL-----PAPDRLRASASCSHWRECLFYPALW 108
A +P E++V IF L P P RA+ C W+E PALW
Sbjct: 105 EGPDAGWGDRIPLEILVQIFGLLVAADGPMPFLGRAARVCRRWQEAASQPALW 157
>gi|8923179 F-box and leucine-rich repeat protein 12 [Homo sapiens]
Length = 326
Score = 38.1 bits (87), Expect = 0.021
Identities = 17/50 (34%), Positives = 26/50 (52%)
Query: 66 AGAASLPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQLRICL 115
A LP +++ IFS+LP DR+R S C W+ + LW + + L
Sbjct: 2 ATLVELPDSVLLEIFSYLPVRDRIRISRVCHRWKRLVDDRWLWRHVDLTL 51
>gi|30795117 F-box only protein, helicase, 18 isoform 1 [Homo
sapiens]
Length = 1094
Score = 37.7 bits (86), Expect = 0.028
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 70 SLPSELIVHIFSFLPAPDRL-RASASCSHWRECLFYPALWPQLRICLRVSPAEQ---PRL 125
SLPSE++ H+F+FLP D S C WRE + P P ++ R E+ ++
Sbjct: 265 SLPSEVLRHVFAFLPVEDLYWNLSLVCHLWREIISDPLFIPWKKLYHRYLMNEEQAVSKV 324
Query: 126 EFLMRKCG 133
+ ++ CG
Sbjct: 325 DGILSNCG 332
>gi|30795119 F-box only protein, helicase, 18 isoform 2 [Homo
sapiens]
Length = 1043
Score = 37.7 bits (86), Expect = 0.028
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 4/68 (5%)
Query: 70 SLPSELIVHIFSFLPAPDRL-RASASCSHWRECLFYPALWPQLRICLRVSPAEQ---PRL 125
SLPSE++ H+F+FLP D S C WRE + P P ++ R E+ ++
Sbjct: 214 SLPSEVLRHVFAFLPVEDLYWNLSLVCHLWREIISDPLFIPWKKLYHRYLMNEEQAVSKV 273
Query: 126 EFLMRKCG 133
+ ++ CG
Sbjct: 274 DGILSNCG 281
>gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens]
Length = 491
Score = 37.0 bits (84), Expect = 0.047
Identities = 17/50 (34%), Positives = 23/50 (46%)
Query: 64 QAAGAASLPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQLRI 113
+ A LP +V IFSFLP R + C W + P LW +R+
Sbjct: 110 EQASIDRLPDHSMVQIFSFLPTNQLCRCARVCRRWYNLAWDPRLWRTIRL 159
>gi|208431817 protein kinase-like protein SgK493 [Homo sapiens]
Length = 493
Score = 36.6 bits (83), Expect = 0.062
Identities = 24/66 (36%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 8 PQPRP-PGARTRAGAARVARWRRLRLQQLRRLRGLLRVLRGRPGAGSRRRGRMALCGQAA 66
P+P P PG R G +AR R R ++++R RG PG G+ R R L A
Sbjct: 39 PEPSPAPGPGRRGGRGELARQIRARYEEVQRYS------RGGPGPGAGRPERRRLMDLAP 92
Query: 67 GAASLP 72
G LP
Sbjct: 93 GGPGLP 98
>gi|157743247 F-box protein 45 [Homo sapiens]
Length = 286
Score = 36.2 bits (82), Expect = 0.081
Identities = 20/57 (35%), Positives = 27/57 (47%), Gaps = 4/57 (7%)
Query: 50 GAGSRRRGRMALCGQAAGAAS----LPSELIVHIFSFLPAPDRLRASASCSHWRECL 102
GAG G A G +GAA LPS ++ +FS+L + + C HW CL
Sbjct: 14 GAGCSGGGAGAGAGSGSGAAGAGGRLPSRVLELVFSYLELSELRSCALVCKHWYRCL 70
Score = 30.4 bits (67), Expect = 4.4
Identities = 17/39 (43%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 150 SGGGPGDGGGADTGTGGEEVEALQLSARWLEVLRTYLEL 188
SGGG G G G+ +G G +L +R LE++ +YLEL
Sbjct: 18 SGGGAGAGAGSGSGAAG---AGGRLPSRVLELVFSYLEL 53
>gi|23397500 F-box protein 39 [Homo sapiens]
Length = 442
Score = 35.8 bits (81), Expect = 0.11
Identities = 22/80 (27%), Positives = 36/80 (45%), Gaps = 5/80 (6%)
Query: 69 ASLPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQLRICL-----RVSPAEQP 123
A LP + +F +L DR RA+ C W + ++ LW I RV +E
Sbjct: 17 AFLPDLCLCRVFWWLGDRDRSRAALVCRKWNQMMYSAELWRYRTITFSGRPSRVHASEVE 76
Query: 124 RLEFLMRKCGWFVRELRVEF 143
+ ++K G ++ L V+F
Sbjct: 77 SAVWYVKKFGRYLEHLEVKF 96
>gi|16306595 S-phase kinase-associated protein 2 isoform 1 [Homo
sapiens]
Length = 424
Score = 35.4 bits (80), Expect = 0.14
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 70 SLPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQL 111
SLP EL++ IFS L P+ L+ S C W +LW L
Sbjct: 99 SLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTL 140
>gi|14249170 S-phase kinase-associated protein 2 isoform 2 [Homo
sapiens]
Length = 410
Score = 35.4 bits (80), Expect = 0.14
Identities = 17/42 (40%), Positives = 22/42 (52%)
Query: 70 SLPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQL 111
SLP EL++ IFS L P+ L+ S C W +LW L
Sbjct: 99 SLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLWQTL 140
>gi|22748931 F-box and leucine-rich repeat protein 14 [Homo sapiens]
Length = 418
Score = 35.0 bits (79), Expect = 0.18
Identities = 17/56 (30%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 74 ELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQLRICL---RVSPAEQPRLE 126
EL+ IF +L D+ RA+ C+ WR+ ++ ++W + L R +P+ P L+
Sbjct: 11 ELLAMIFGYLDVRDKGRAAQVCTAWRDAAYHKSVWRGVEAKLHLRRANPSLFPSLQ 66
>gi|30089926 F-box only protein 11 isoform 1 [Homo sapiens]
Length = 843
Score = 34.7 bits (78), Expect = 0.24
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 71 LPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQL 111
LP E+++ IFS+L D RA+ C + E P LW +L
Sbjct: 75 LPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILWKRL 115
>gi|30089924 F-box only protein 11 isoform 2 [Homo sapiens]
Length = 686
Score = 34.7 bits (78), Expect = 0.24
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 71 LPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQL 111
LP E+++ IFS+L D RA+ C + E P LW +L
Sbjct: 75 LPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILWKRL 115
>gi|30089922 F-box only protein 11 isoform 3 [Homo sapiens]
Length = 585
Score = 34.7 bits (78), Expect = 0.24
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 71 LPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQL 111
LP E+++ IFS+L D RA+ C + E P LW +L
Sbjct: 75 LPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILWKRL 115
>gi|88196790 coiled-coil domain containing 88 [Homo sapiens]
Length = 1476
Score = 34.7 bits (78), Expect = 0.24
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 9/52 (17%)
Query: 8 PQPRPPGARTRAGAA-------RVARWRRLRL--QQLRRLRGLLRVLRGRPG 50
P P PG AGAA R A RLR ++ R LRGLL+VL+G+PG
Sbjct: 432 PPPGSPGEAPLAGAAPSLQDEVREAEAGRLRTLERENRELRGLLQVLQGQPG 483
>gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [Homo
sapiens]
Length = 589
Score = 34.3 bits (77), Expect = 0.31
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 71 LPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALW 108
LP EL +++ SFL D L+A+ +C +WR LW
Sbjct: 166 LPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLW 203
>gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [Homo
sapiens]
Length = 707
Score = 34.3 bits (77), Expect = 0.31
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 71 LPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALW 108
LP EL +++ SFL D L+A+ +C +WR LW
Sbjct: 284 LPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLW 321
>gi|16117779 F-box and WD repeat domain containing 7 isoform 2 [Homo
sapiens]
Length = 627
Score = 34.3 bits (77), Expect = 0.31
Identities = 15/38 (39%), Positives = 22/38 (57%)
Query: 71 LPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALW 108
LP EL +++ SFL D L+A+ +C +WR LW
Sbjct: 204 LPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLW 241
>gi|22547149 F-box only protein 22 isoform a [Homo sapiens]
Length = 403
Score = 34.3 bits (77), Expect = 0.31
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 9/50 (18%)
Query: 62 CGQAAGAASLP---------SELIVHIFSFLPAPDRLRASASCSHWRECL 102
CG+ G++ P +E++ + +FLPA LR + C WREC+
Sbjct: 7 CGECRGSSVDPRSTFVLSNLAEVVERVLTFLPAKALLRVACVCRLWRECV 56
>gi|13443000 F-box only protein 22 isoform b [Homo sapiens]
Length = 276
Score = 34.3 bits (77), Expect = 0.31
Identities = 16/50 (32%), Positives = 26/50 (52%), Gaps = 9/50 (18%)
Query: 62 CGQAAGAASLP---------SELIVHIFSFLPAPDRLRASASCSHWRECL 102
CG+ G++ P +E++ + +FLPA LR + C WREC+
Sbjct: 7 CGECRGSSVDPRSTFVLSNLAEVVERVLTFLPAKALLRVACVCRLWRECV 56
>gi|27734755 F-box and leucine-rich repeat protein 20 [Homo sapiens]
Length = 436
Score = 33.1 bits (74), Expect = 0.68
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 71 LPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQLRICLRVSPAEQPRLEFLMR 130
LP EL++ IFSFL R + W + W ++ + E +E + +
Sbjct: 28 LPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRIDLFDFQRDIEGRVVENISK 87
Query: 131 KCGWFVREL 139
+CG F+R+L
Sbjct: 88 RCGGFLRKL 96
>gi|16306582 F-box and leucine-rich repeat protein 2 [Homo sapiens]
Length = 423
Score = 33.1 bits (74), Expect = 0.68
Identities = 19/69 (27%), Positives = 32/69 (46%)
Query: 71 LPSELIVHIFSFLPAPDRLRASASCSHWRECLFYPALWPQLRICLRVSPAEQPRLEFLMR 130
LP EL++ IFSFL R + W + W ++ + E +E + +
Sbjct: 15 LPKELLLRIFSFLDIVTLCRCAQISKAWNILALDGSNWQRIDLFNFQIDVEGRVVENISK 74
Query: 131 KCGWFVREL 139
+CG F+R+L
Sbjct: 75 RCGGFLRKL 83
>gi|55749804 aminopeptidase Fxna [Homo sapiens]
Length = 904
Score = 32.7 bits (73), Expect = 0.89
Identities = 27/66 (40%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 137 RELRVEFAAENYLSGGG------PGDGGGAD--TGTGGEEVEALQLSARWLEVLRTYLEL 188
RE R + + SGGG PG GGA GTG EV A A +L LRT ++L
Sbjct: 31 REARAQEPLVDGCSGGGRTRKRSPGGSGGASRGAGTGLSEVRAALGLALYLIALRTLVQL 90
Query: 189 VLCVLV 194
L LV
Sbjct: 91 SLQQLV 96
>gi|239752392 PREDICTED: hypothetical protein XP_002348220 [Homo
sapiens]
Length = 189
Score = 31.6 bits (70), Expect = 2.0
Identities = 25/82 (30%), Positives = 32/82 (39%), Gaps = 3/82 (3%)
Query: 3 LFLSVPQPRPPGARTRAGAARVARWRRLRLQQLRRLRGLLRVLRGRPGAGSRRRGRMALC 62
L S + RP G RA R W+ + L+ R RPG S+RR R
Sbjct: 98 LSASPEKTRPEG---RAERGRAVVWQSQPNRWLQTARPTHAPAPARPGRQSKRRSRTGFP 154
Query: 63 GQAAGAASLPSELIVHIFSFLP 84
G+ GAA L + LP
Sbjct: 155 GRGRGAARKARRLTARLKLLLP 176
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.137 0.414
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,284,851
Number of Sequences: 37866
Number of extensions: 962434
Number of successful extensions: 4460
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 29
Number of HSP's that attempted gapping in prelim test: 4367
Number of HSP's gapped (non-prelim): 98
length of query: 555
length of database: 18,247,518
effective HSP length: 107
effective length of query: 448
effective length of database: 14,195,856
effective search space: 6359743488
effective search space used: 6359743488
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 64 (29.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.