Guide to the Human Genome
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Name: SKP2 Sequence: fasta or formatted (424aa) NCBI GI: 16306595
Description:

S-phase kinase-associated protein 2 isoform 1

Referenced in:

Cullins and SCF Complexes
Cyclins and Related Functions

Other entries for this name:
alt prot [410aa] S-phase kinase-associated protein 2 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.6         11           1
 C cysteine            3.3         14           1
 D aspartate           5.0         21           1
 E glutamate           5.9         25           2
 F phenylalanine       4.0         17           2
 G glycine             5.0         21           1
 H histidine           3.1         13           1
 I isoleucine          4.2         18           2
 K lysine              5.4         23           2
 L leucine            16.5         70           3
 M methionine          1.2          5           1
 N asparagine          5.0         21           1
 P proline             5.2         22           2
 Q glutamine           4.7         20           1
 R arginine            5.0         21           2
 S serine             11.1         47           2
 T threonine           5.0         21           2
 V valine              5.4         23           1
 W tryptophan          1.7          7           1
 Y tyrosine            0.9          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   S-phase kinase-associated protein 2 isoform 1 
SKP2                  0.829   S-phase kinase-associated protein 2 isoform 2 
FBXL20                0.067   F-box and leucine-rich repeat protein 20 
FBXL2                 0.066   F-box and leucine-rich repeat protein 2 
FBXL7                 0.060   F-box and leucine-rich repeat protein 7 
KDM2B                 0.040   F-box and leucine-rich repeat protein 10 isoform a [...
KDM2B                 0.038   F-box and leucine-rich repeat protein 10 isoform b [...
FBXL4                 0.038   F-box and leucine-rich repeat protein 4 
FBXL13                0.036   F-box and leucine-rich repeat protein 13 isoform 2 ...
FBXL13                0.036   F-box and leucine-rich repeat protein 13 isoform 1 ...
KDM2A                 0.034   F-box and leucine-rich repeat protein 11 
FBXL12                0.032   F-box and leucine-rich repeat protein 12 
FBXL6                 0.031   F-box and leucine-rich repeat protein 6 isoform 1 [H...
FBXL15                0.030   F-box and leucine-rich repeat protein 15 
FBXL21                0.029   F-box and leucine-rich repeat protein 21 
FBXL19                0.028   F-box and leucine-rich repeat protein 19 
FBXL6                 0.026   F-box and leucine-rich repeat protein 6 isoform 2 [H...
FBXL16                0.024   F-box and leucine-rich repeat protein 16 
FBXL14                0.024   F-box and leucine-rich repeat protein 14 
LRRC29                0.024   F-box and leucine-rich repeat protein 9 
LRRC29                0.024   F-box and leucine-rich repeat protein 9 
FBXO11                0.023   F-box only protein 11 isoform 1 
FBXO11                0.023   F-box only protein 11 isoform 2 
FBXO11                0.023   F-box only protein 11 isoform 3 
AMN1                  0.019   antagonist of mitotic exit network 1 homolog 
FBXW12                0.017   F-box and WD repeat domain containing 12 isoform 2 ...
FBXW12                0.017   F-box and WD repeat domain containing 12 isoform 1 ...
FBXO15                0.014   F-box protein 15 isoform 2 
FBXL5                 0.014   F-box and leucine-rich repeat protein 5 isoform 2 [H...
FBXL5                 0.014   F-box and leucine-rich repeat protein 5 isoform 1 [H...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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