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Search of human proteins with 41350212
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|41350212 bromodomain containing 7 [Homo sapiens]
(651 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|41350212 bromodomain containing 7 [Homo sapiens] 1313 0.0
gi|237649104 bromodomain containing 9 isoform 1 [Homo sapiens] 349 5e-96
gi|242247075 bromodomain containing 9 isoform 2 [Homo sapiens] 217 3e-56
gi|11321642 bromodomain containing protein 1 [Homo sapiens] 91 3e-18
gi|148727368 bromodomain and PHD finger containing, 3 [Homo sapi... 91 4e-18
gi|51173722 bromodomain and PHD finger-containing protein 1 isof... 87 4e-17
gi|51173720 bromodomain and PHD finger-containing protein 1 isof... 82 2e-15
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 69 2e-11
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 68 3e-11
gi|119943102 CREB binding protein isoform b [Homo sapiens] 65 3e-10
gi|119943104 CREB binding protein isoform a [Homo sapiens] 65 3e-10
gi|34452709 bromodomain containing 8 isoform 3 [Homo sapiens] 65 3e-10
gi|164419758 bromodomain containing 2 [Homo sapiens] 64 3e-10
gi|4826806 bromodomain containing 2 [Homo sapiens] 64 3e-10
gi|34452707 bromodomain containing 8 isoform 2 [Homo sapiens] 62 1e-09
gi|34452705 bromodomain containing 8 isoform 1 [Homo sapiens] 62 1e-09
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 62 2e-09
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 62 2e-09
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 61 3e-09
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 61 3e-09
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 61 3e-09
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 61 3e-09
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 61 3e-09
gi|40805843 K(lysine) acetyltransferase 2B [Homo sapiens] 59 1e-08
gi|50345997 E1A binding protein p300 [Homo sapiens] 59 1e-08
gi|30794372 polybromo 1 isoform 1 [Homo sapiens] 59 2e-08
gi|93102371 polybromo 1 isoform 2 [Homo sapiens] 59 2e-08
gi|41281917 polybromo 1 isoform 4 [Homo sapiens] 59 2e-08
gi|20357588 TBP-associated factor 1 isoform 2 [Homo sapiens] 58 2e-08
gi|20357585 TBP-associated factor 1 isoform 1 [Homo sapiens] 58 2e-08
>gi|41350212 bromodomain containing 7 [Homo sapiens]
Length = 651
Score = 1313 bits (3398), Expect = 0.0
Identities = 651/651 (100%), Positives = 651/651 (100%)
Query: 1 MGKKHKKHKSDKHLYEEYVEKPLKLVLKVGGNEVTELSTGSSGHDSSLFEDKNDHDKHKD 60
MGKKHKKHKSDKHLYEEYVEKPLKLVLKVGGNEVTELSTGSSGHDSSLFEDKNDHDKHKD
Sbjct: 1 MGKKHKKHKSDKHLYEEYVEKPLKLVLKVGGNEVTELSTGSSGHDSSLFEDKNDHDKHKD 60
Query: 61 RKRKKRKKGEKQIPGEEKGRKRRRVKEDKKKRDRDRVENEAEKDLQCHAPVRLDLPPEKP 120
RKRKKRKKGEKQIPGEEKGRKRRRVKEDKKKRDRDRVENEAEKDLQCHAPVRLDLPPEKP
Sbjct: 61 RKRKKRKKGEKQIPGEEKGRKRRRVKEDKKKRDRDRVENEAEKDLQCHAPVRLDLPPEKP 120
Query: 121 LTSSLAKQEEVEQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFST 180
LTSSLAKQEEVEQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFST
Sbjct: 121 LTSSLAKQEEVEQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFST 180
Query: 181 MKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQSL 240
MKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQSL
Sbjct: 181 MKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQSL 240
Query: 241 KQSIDFMADLQKTRKQKDGTDTSQSGEDGGCWQREREDSGDAEAHAFKSPSKENKKKDKD 300
KQSIDFMADLQKTRKQKDGTDTSQSGEDGGCWQREREDSGDAEAHAFKSPSKENKKKDKD
Sbjct: 241 KQSIDFMADLQKTRKQKDGTDTSQSGEDGGCWQREREDSGDAEAHAFKSPSKENKKKDKD 300
Query: 301 MLEDKFKSNNLEREQEQLDRIVKESGGKLTRRLVNSQCEFERRKPDGTTTLGLLHPVDPI 360
MLEDKFKSNNLEREQEQLDRIVKESGGKLTRRLVNSQCEFERRKPDGTTTLGLLHPVDPI
Sbjct: 301 MLEDKFKSNNLEREQEQLDRIVKESGGKLTRRLVNSQCEFERRKPDGTTTLGLLHPVDPI 360
Query: 361 VGEPGYCPVRLGMTTGRLQSGVNTLQGFKEDKRNKVTPVLYLNYGPYSSYAPHYDSTFAN 420
VGEPGYCPVRLGMTTGRLQSGVNTLQGFKEDKRNKVTPVLYLNYGPYSSYAPHYDSTFAN
Sbjct: 361 VGEPGYCPVRLGMTTGRLQSGVNTLQGFKEDKRNKVTPVLYLNYGPYSSYAPHYDSTFAN 420
Query: 421 ISKDDSDLIYSTYGEDSDLPSDFSIHEFLATCQDYPYVMADSLLDVLTKGGHSRTLQEME 480
ISKDDSDLIYSTYGEDSDLPSDFSIHEFLATCQDYPYVMADSLLDVLTKGGHSRTLQEME
Sbjct: 421 ISKDDSDLIYSTYGEDSDLPSDFSIHEFLATCQDYPYVMADSLLDVLTKGGHSRTLQEME 480
Query: 481 MSLPEDEGHTRTLDTAKEMEITEVEPPGRLDSSTQDRLIALKAVTNFGVPVEVFDSEEAE 540
MSLPEDEGHTRTLDTAKEMEITEVEPPGRLDSSTQDRLIALKAVTNFGVPVEVFDSEEAE
Sbjct: 481 MSLPEDEGHTRTLDTAKEMEITEVEPPGRLDSSTQDRLIALKAVTNFGVPVEVFDSEEAE 540
Query: 541 IFQKKLDETTRLLRELQEAQNERLSTRPPPNMICLLGPSYREMHLAEQVTNNLKELAQQV 600
IFQKKLDETTRLLRELQEAQNERLSTRPPPNMICLLGPSYREMHLAEQVTNNLKELAQQV
Sbjct: 541 IFQKKLDETTRLLRELQEAQNERLSTRPPPNMICLLGPSYREMHLAEQVTNNLKELAQQV 600
Query: 601 TPGDIVSTYGVRKAMGISIPSPVMENNFVDLTEDTEEPKKTDVAECGPGGS 651
TPGDIVSTYGVRKAMGISIPSPVMENNFVDLTEDTEEPKKTDVAECGPGGS
Sbjct: 601 TPGDIVSTYGVRKAMGISIPSPVMENNFVDLTEDTEEPKKTDVAECGPGGS 651
>gi|237649104 bromodomain containing 9 isoform 1 [Homo sapiens]
Length = 597
Score = 349 bits (895), Expect = 5e-96
Identities = 215/606 (35%), Positives = 340/606 (56%), Gaps = 66/606 (10%)
Query: 1 MGKKHKKHKSD-KHLYEEY----VEKPLKLVLKVGGNEVTELSTGSSGHDSSLFEDKNDH 55
MGKKHKKHK++ + YE+Y +EKPLKLVLKVGG+EVTELS SGHDSS ++D++DH
Sbjct: 1 MGKKHKKHKAEWRSSYEDYADKPLEKPLKLVLKVGGSEVTELS--GSGHDSSYYDDRSDH 58
Query: 56 DK--HKDRKRKKRKKGEKQIPGEEKGRKRRRVKEDKKKRDRDRVENEAEKD-LQCHAPVR 112
++ HK++K+KK+KK EK+ +++ R++R+ +E K+KR+R+ + E E D V
Sbjct: 59 ERERHKEKKKKKKKKSEKEKHLDDEERRKRK-EEKKRKREREHCDTEGEADDFDPGKKVE 117
Query: 113 LDLPPEKPLTSSLAKQEEVEQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMII 172
++ PP++P+ + + E E TP+Q+ L +RQLQRKDP FF+FPVTD IAPGYSMII
Sbjct: 118 VEPPPDRPVRACRTQPAENESTPIQQLLEHFLRQLQRKDPHGFFAFPVTDAIAPGYSMII 177
Query: 173 KHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKIL 232
KHPMDF TMK+KI N+Y+S+ E K +FKLMC NAM YN+P+T+YYK AKK+LH+G K++
Sbjct: 178 KHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKILHAGFKMM 237
Query: 233 SQERIQSLKQSIDFMADLQKTRKQKDGTDTSQSGEDGGCWQREREDSGDAEAHAFKSPSK 292
S++ + G + + + + K K
Sbjct: 238 SKQ--------------------------AALLGNEDTAVEEPVPEVVPVQVETAKKSKK 271
Query: 293 ENKKKDKDMLEDKFKSNNL------EREQEQLDRIVKESGGKLTRRLVNSQCEFERRKPD 346
+++ M E + + +L E ++ E+ ++ R L + + +R D
Sbjct: 272 PSREVISCMFEPEGNACSLTDSTAEEHVLALVEHAADEARDRINRFLPGGKMGYLKRNGD 331
Query: 347 GTTTLGLLHPVDPIVGEPGYCPVRLGMTTGRLQSGVNTLQGFKEDKRNKVTPVLYLNYGP 406
G+ +++ +P E PV L + +L G TL GFK+++RNKVT +L+
Sbjct: 332 GSLLYSVVNTAEPDADEEETHPVDLSSLSSKLLPGFTTL-GFKDERRNKVT---FLS-SA 386
Query: 407 YSSYAPHYDSTFANISKDDSDLIYSTYGEDSDLPSDFSIHEFLATCQDYPYVMADSLLDV 466
++ + +S F ++ D+ +L+YS YG+++ + S+ EF+ Y + D LLD
Sbjct: 387 TTALSMQNNSVFGDLKSDEMELLYSAYGDETGVQCALSLQEFVKDAGSYSKKVVDDLLDQ 446
Query: 467 LTKGGHSRTLQEMEM-----SLPEDE---GHTRTLDTAKEMEITEVEPPGRLDSSTQDRL 518
+T G HSRTL +++ P DE G T ++ +E ++ S D
Sbjct: 447 ITGGDHSRTLFQLKQRRNVPMKPPDEAKVGDTLGDSSSSVLEFMSMK-------SYPDVS 499
Query: 519 IALKAVTNFGVPVEVFDSEEAEIFQKKLDETTRLLRELQEAQNERLSTRPPPNMICLLGP 578
+ + +++ G + D +++ + LDETT+LL++L EAQ ER +RP N+ L
Sbjct: 500 VDISMLSSLGKVKKELDPDDSHL---NLDETTKLLQDLHEAQAERGGSRPSSNLSSLSNA 556
Query: 579 SYREMH 584
S R+ H
Sbjct: 557 SERDQH 562
>gi|242247075 bromodomain containing 9 isoform 2 [Homo sapiens]
Length = 544
Score = 217 bits (552), Expect = 3e-56
Identities = 141/449 (31%), Positives = 229/449 (51%), Gaps = 55/449 (12%)
Query: 150 KDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMI 209
+DP FF+FPVTD IAPGYSMIIKHPMDF TMK+KI N+Y+S+ E K +FKLMC NAM
Sbjct: 102 RDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMT 161
Query: 210 YNKPETIYYKAAKKLLHSGMKILSQERIQSLKQSIDFMADLQKTRKQKDGTDTSQSGEDG 269
YN+P+T+YYK AKK+LH+G K++S++ + G +
Sbjct: 162 YNRPDTVYYKLAKKILHAGFKMMSKQ--------------------------AALLGNED 195
Query: 270 GCWQREREDSGDAEAHAFKSPSKENKKKDKDMLEDKFKSNNL------EREQEQLDRIVK 323
+ + + K K +++ M E + + +L E ++
Sbjct: 196 TAVEEPVPEVVPVQVETAKKSKKPSREVISCMFEPEGNACSLTDSTAEEHVLALVEHAAD 255
Query: 324 ESGGKLTRRLVNSQCEFERRKPDGTTTLGLLHPVDPIVGEPGYCPVRLGMTTGRLQSGVN 383
E+ ++ R L + + +R DG+ +++ +P E PV L + +L G
Sbjct: 256 EARDRINRFLPGGKMGYLKRNGDGSLLYSVVNTAEPDADEEETHPVDLSSLSSKLLPGFT 315
Query: 384 TLQGFKEDKRNKVTPVLYLNYGPYSSYAPHYDSTFANISKDDSDLIYSTYGEDSDLPSDF 443
TL GFK+++RNKVT +L+ ++ + +S F ++ D+ +L+YS YG+++ +
Sbjct: 316 TL-GFKDERRNKVT---FLS-SATTALSMQNNSVFGDLKSDEMELLYSAYGDETGVQCAL 370
Query: 444 SIHEFLATCQDYPYVMADSLLDVLTKGGHSRTLQEMEM-----SLPEDE---GHTRTLDT 495
S+ EF+ Y + D LLD +T G HSRTL +++ P DE G T +
Sbjct: 371 SLQEFVKDAGSYSKKVVDDLLDQITGGDHSRTLFQLKQRRNVPMKPPDEAKVGDTLGDSS 430
Query: 496 AKEMEITEVEPPGRLDSSTQDRLIALKAVTNFGVPVEVFDSEEAEIFQKKLDETTRLLRE 555
+ +E ++ S D + + +++ G + D +++ + LDETT+LL++
Sbjct: 431 SSVLEFMSMK-------SYPDVSVDISMLSSLGKVKKELDPDDSHL---NLDETTKLLQD 480
Query: 556 LQEAQNERLSTRPPPNMICLLGPSYREMH 584
L EAQ ER +RP N+ L S R+ H
Sbjct: 481 LHEAQAERGGSRPSSNLSSLSNASERDQH 509
>gi|11321642 bromodomain containing protein 1 [Homo sapiens]
Length = 1058
Score = 90.9 bits (224), Expect = 3e-18
Identities = 52/165 (31%), Positives = 90/165 (54%), Gaps = 14/165 (8%)
Query: 86 KEDKKKRDRDRVENEAEKDLQCHAPVRLDLPPEKPLTSSLAKQEEVEQ------------ 133
+ ++R+ D A++ L+ +R DL + L L K+E++++
Sbjct: 503 QRSSQQRENDEEMKAAKEKLKYWQRLRHDLERARLLIELLRKREKLKREQVKVEQVAMEL 562
Query: 134 --TPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQ 191
TPL L ++ QLQ KDP+ F+ PV+ P Y IKHPMDF+TM+++++ Y+
Sbjct: 563 RLTPLTVLLRSVLDQLQDKDPARIFAQPVSLKEVPDYLDHIKHPMDFATMRKRLEAQGYK 622
Query: 192 SIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQER 236
++ E +++F L+ N M YN +T++Y+AA +L G +L Q R
Sbjct: 623 NLHEFEEDFDLIIDNCMKYNARDTVFYRAAVRLRDQGGVVLRQAR 667
>gi|148727368 bromodomain and PHD finger containing, 3 [Homo
sapiens]
Length = 1205
Score = 90.5 bits (223), Expect = 4e-18
Identities = 63/232 (27%), Positives = 118/232 (50%), Gaps = 20/232 (8%)
Query: 22 PLKLVLKVGGNEVTELSTGSSGHDSSLFEDKNDHDKHKDRKRKKRKKGEKQIPGEEKGRK 81
P+ V ++ + ++ +G S F+ KN + +++ +P +
Sbjct: 472 PMLAVPQIPSYRLNKICSGLS------FQRKNQFMQRLHNYWLLKRQARNGVPLIRRLHS 525
Query: 82 RRRVKEDKKKRDRDRVENEAEKDLQCHAPVRLDLPPEKPLTSSLAKQEEV--EQTPLQEA 139
+ + + ++R++D + +++L+ +R DL + L + K+E++ EQ +Q+A
Sbjct: 526 HLQSQRNAEQREQDEKTSAVKEELKYWQKLRHDLERARLLIELIRKREKLKREQVKVQQA 585
Query: 140 --------LNQLMRQ----LQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKN 187
N L+R LQ KDP+ F+ PV P Y I PMDFSTM+ K+++
Sbjct: 586 AMELELMPFNVLLRTTLDLLQEKDPAHIFAEPVNLSEVPDYLEFISKPMDFSTMRRKLES 645
Query: 188 NDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQS 239
+ Y+++EE +++F L+ TN M YN +TI+++AA +L G IL R Q+
Sbjct: 646 HLYRTLEEFEEDFNLIVTNCMKYNAKDTIFHRAAVRLRDLGGAILRHARRQA 697
>gi|51173722 bromodomain and PHD finger-containing protein 1 isoform
2 [Homo sapiens]
Length = 1214
Score = 87.4 bits (215), Expect = 4e-17
Identities = 82/287 (28%), Positives = 133/287 (46%), Gaps = 18/287 (6%)
Query: 75 GEEKGRKRRRVKEDKKKRDRDRVENEAEKDLQCHAPVRLDLPPEKPLTSSLAKQE---EV 131
G + K +KE K R R + E + L V L EK ++ Q+ E+
Sbjct: 574 GRDSEDKNWALKEQLKSWQRLRHDLERARLL-----VELIRKREKLKRETIKVQQIAMEM 628
Query: 132 EQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQ 191
+ TP L + + QLQ KD FS PV P Y IK PMDF TMK+ ++ Y
Sbjct: 629 QLTPFLILLRKTLEQLQEKDTGNIFSEPVPLSEVPDYLDHIKKPMDFFTMKQNLEAYRYL 688
Query: 192 SIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQSLKQSIDFMADLQ 251
+ ++ +++F L+ +N + YN +TI+Y+AA +L G +L Q R Q+ K IDF +
Sbjct: 689 NFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVRLREQGGAVLRQARRQAEKMGIDFETGMH 748
Query: 252 KTRKQKDGTDTSQSGEDGGCWQREREDSGDAEAHAFKSPSKENKKKDKDMLEDKFKSNNL 311
G + + ED + ER + + H P +E K + L D+ ++
Sbjct: 749 IPHSLA-GDEATHHTEDAA--EEERLVLLENQKHL---PVEEQLKLLLERL-DEVNASKQ 801
Query: 312 EREQEQLDRIVKESGGKLTRRLVNSQCEFERRKPD--GTTTLGLLHP 356
+ + +++K+ L R+L + Q E R P+ G ++ G L P
Sbjct: 802 SVGRSRRAKMIKKEMTALRRKLAH-QRETGRDGPERHGPSSRGSLTP 847
>gi|51173720 bromodomain and PHD finger-containing protein 1 isoform
1 [Homo sapiens]
Length = 1220
Score = 82.0 bits (201), Expect = 2e-15
Identities = 83/293 (28%), Positives = 135/293 (46%), Gaps = 24/293 (8%)
Query: 75 GEEKGRKRRRVKEDKKKRDRDRVENEAEKDLQCHAPVRLDLPPEKPLTSSLAKQE---EV 131
G + K +KE K R R + E + L V L EK ++ Q+ E+
Sbjct: 574 GRDSEDKNWALKEQLKSWQRLRHDLERARLL-----VELIRKREKLKRETIKVQQIAMEM 628
Query: 132 EQTPLQEALNQLMRQLQRKDPSAFFSFPV-----TDFI-APGYSMIIKHPMDFSTMKEKI 185
+ TP L + + QLQ KD FS PV T+ P Y IK PMDF TMK+ +
Sbjct: 629 QLTPFLILLRKTLEQLQEKDTGNIFSEPVPLSEVTELDEVPDYLDHIKKPMDFFTMKQNL 688
Query: 186 KNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQSLKQSID 245
+ Y + ++ +++F L+ +N + YN +TI+Y+AA +L G +L Q R Q+ K ID
Sbjct: 689 EAYRYLNFDDFEEDFNLIVSNCLKYNAKDTIFYRAAVRLREQGGAVLRQARRQAEKMGID 748
Query: 246 FMADLQKTRKQKDGTDTSQSGEDGGCWQREREDSGDAEAHAFKSPSKENKKKDKDMLEDK 305
F + G + + ED + ER + + H P +E K + L D+
Sbjct: 749 FETGMHIPHSLA-GDEATHHTEDAA--EEERLVLLENQKHL---PVEEQLKLLLERL-DE 801
Query: 306 FKSNNLEREQEQLDRIVKESGGKLTRRLVNSQCEFERRKPD--GTTTLGLLHP 356
++ + + +++K+ L R+L + Q E R P+ G ++ G L P
Sbjct: 802 VNASKQSVGRSRRAKMIKKEMTALRRKLAH-QRETGRDGPERHGPSSRGSLTP 853
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 68.6 bits (166), Expect = 2e-11
Identities = 66/264 (25%), Positives = 117/264 (44%), Gaps = 43/264 (16%)
Query: 77 EKGRKRRRVKEDKKKR--DRDRVENEAEKDLQCHAPVRLDLPPEKPLTSSLAKQEEVEQT 134
E+ + R+K+ K++R D+D + + EK A R PP + L+ + K +
Sbjct: 1335 EEMEEEVRLKKRKRRRNVDKDPAKEDVEK-----AKKRRGRPPAEKLSPNPPKLTKQMNA 1389
Query: 135 PLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQSIE 194
+ +N R+ F P + P Y +I+ P+DF +KE+I+N+ Y+S+
Sbjct: 1390 IIDTVINY-KDSSGRQLSEVFIQLPSRKEL-PEYYELIRKPVDFKKIKERIRNHKYRSLG 1447
Query: 195 ELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQSLKQSIDFMADLQKTR 254
+L+ + L+C NA +N + Y+ + L QS+ F + QK
Sbjct: 1448 DLEKDVMLLCHNAQTFNLEGSQIYEDSIVL-----------------QSV-FKSARQKIA 1489
Query: 255 KQKDGTDTSQSGEDGGCWQREREDSGDAEAHAFKSPSKENKKKDKDMLEDKFKS------ 308
K+++ D S E + E E+ ++EA + K K NKK DK + K K
Sbjct: 1490 KEEESEDESNEEE-----EEEDEEESESEAKSVKVKIKLNKKDDKGRDKGKGKKRPNRGK 1544
Query: 309 -----NNLEREQEQLDRIVKESGG 327
++ + ++EQ +R E G
Sbjct: 1545 AKPVVSDFDSDEEQDEREQSEGSG 1568
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 67.8 bits (164), Expect = 3e-11
Identities = 70/291 (24%), Positives = 124/291 (42%), Gaps = 47/291 (16%)
Query: 50 EDKNDHDKHKDRKRKKRKKGEKQIPGEEKGRKRRRVKEDKKKRDRDRVENEAEKDLQCHA 109
ED N + ++ + KKRK+ +K + V++ KK+R R E +
Sbjct: 1330 EDGNLEEMEEEVRLKKRKRRRNV----DKDPAKEDVEKAKKRRGRPPAEKLSPN------ 1379
Query: 110 PVRLDLPPEKPLTSSLAKQEE--VEQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPG 167
P +L + + + ++ VE+ P L R+ F P + P
Sbjct: 1380 PPKLTKQMNAIIDTVINYKDRCNVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKEL-PE 1438
Query: 168 YSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHS 227
Y +I+ P+DF +KE+I+N+ Y+S+ +L+ + L+C NA +N + Y+ + L
Sbjct: 1439 YYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVL--- 1495
Query: 228 GMKILSQERIQSLKQSIDFMADLQKTRKQKDGTDTSQSGEDGGCWQREREDSGDAEAHAF 287
QS+ F + QK K+++ D S E + E E+ ++EA +
Sbjct: 1496 --------------QSV-FKSARQKIAKEEESEDESNEEE-----EEEDEEESESEAKSV 1535
Query: 288 KSPSKENKKKDKDMLEDKFKS-----------NNLEREQEQLDRIVKESGG 327
K K NKK DK + K K ++ + ++EQ +R E G
Sbjct: 1536 KVKIKLNKKDDKGRDKGKGKKRPNRGKAKPVVSDFDSDEEQDEREQSEGSG 1586
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 64.7 bits (156), Expect = 3e-10
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 28/223 (12%)
Query: 34 VTELSTGSSGHDSSLFEDKNDHDKHKDRKRKKRKKGEKQIPGEEKGRKRRRVKEDK---- 89
V E+ T + D+ + D + + + + E+ + G + ++ + E K
Sbjct: 956 VLEMKTETQAEDT-------EPDPGESKGEPRSEMMEEDLQGASQVKEETDIAEQKSEPM 1008
Query: 90 ---KKRDRDRVENEAEKDLQCHAPVRLDLPPEKPLTSSLAKQEEVEQTPLQEALNQLMRQ 146
+K+ +VE + E++ + P +P + K EE L++AL +
Sbjct: 1009 EVDEKKPEVKVEVKEEEESSSNGTASQSTSPSQP-RKKIFKPEE-----LRQALMPTLEA 1062
Query: 147 LQRKDPSAF-FSFPVTDFIA--PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLM 203
L R+DP + F PV + P Y I+K+PMD ST+K K+ YQ + D+ LM
Sbjct: 1063 LYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLM 1122
Query: 204 CTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQSLKQSIDF 246
NA +YN+ + YK KL + ++ I + QS+ +
Sbjct: 1123 FNNAWLYNRKTSRVYKFCSKLAE-----VFEQEIDPVMQSLGY 1160
>gi|119943104 CREB binding protein isoform a [Homo sapiens]
Length = 2442
Score = 64.7 bits (156), Expect = 3e-10
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 28/223 (12%)
Query: 34 VTELSTGSSGHDSSLFEDKNDHDKHKDRKRKKRKKGEKQIPGEEKGRKRRRVKEDK---- 89
V E+ T + D+ + D + + + + E+ + G + ++ + E K
Sbjct: 994 VLEMKTETQAEDT-------EPDPGESKGEPRSEMMEEDLQGASQVKEETDIAEQKSEPM 1046
Query: 90 ---KKRDRDRVENEAEKDLQCHAPVRLDLPPEKPLTSSLAKQEEVEQTPLQEALNQLMRQ 146
+K+ +VE + E++ + P +P + K EE L++AL +
Sbjct: 1047 EVDEKKPEVKVEVKEEEESSSNGTASQSTSPSQP-RKKIFKPEE-----LRQALMPTLEA 1100
Query: 147 LQRKDPSAF-FSFPVTDFIA--PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLM 203
L R+DP + F PV + P Y I+K+PMD ST+K K+ YQ + D+ LM
Sbjct: 1101 LYRQDPESLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLM 1160
Query: 204 CTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQSLKQSIDF 246
NA +YN+ + YK KL + ++ I + QS+ +
Sbjct: 1161 FNNAWLYNRKTSRVYKFCSKLAE-----VFEQEIDPVMQSLGY 1198
>gi|34452709 bromodomain containing 8 isoform 3 [Homo sapiens]
Length = 757
Score = 64.7 bits (156), Expect = 3e-10
Identities = 72/273 (26%), Positives = 114/273 (41%), Gaps = 37/273 (13%)
Query: 33 EVTELSTGSSGHDSSLFEDKNDHD-KHKDRKRKKRKKGE--------KQIPGE---EKGR 80
E + S S H S+ ED + + +HK K+ K PGE E G
Sbjct: 471 EASPESMLSPSHGSNPIEDPLEAETQHKFEMSDSLKEESGTIFGSQIKDAPGEDEEEDGV 530
Query: 81 KRRRVKEDKKKRDR-----DRVENE---AEKD---------LQCHAPVRLDLPPEKPLTS 123
E+ K+ D+ ++NE +E D LQ H D P P +S
Sbjct: 531 SEAASLEEPKEEDQGEGYLSEMDNEPPVSESDDGFSIHNATLQSHTLA--DSIPSSPASS 588
Query: 124 SLA----KQEEVEQTPL-QEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDF 178
+ QE ++ + ++A+ + R + F PVTD IAPGY I++ PMD
Sbjct: 589 QFSVCSEDQEAIQAQKIWKKAIMLVWRAAANHRYANVFLQPVTDDIAPGYHSIVQRPMDL 648
Query: 179 STMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQ 238
ST+K+ I+N +S E + + LM NA++YN + Y A ++ ++ + Q
Sbjct: 649 STIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDVLEQIQQFLAT 708
Query: 239 SLKQSIDFMADLQKTRKQKDGTDTSQSGE-DGG 270
L K+ + +D T + E DGG
Sbjct: 709 QLIMQTSESGISAKSLRGRDSTRKQDASEKDGG 741
>gi|164419758 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 64.3 bits (155), Expect = 3e-10
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 18/195 (9%)
Query: 116 PPEKPLTSSLAKQEEVEQTPLQEAL---NQLMRQLQRKDPSAF---FSFPVTDFIAPG-- 167
PP K L S + + ++ L E L N ++++L K +A+ F PV D A G
Sbjct: 326 PPRKDLPDSQQQHQSSKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPV-DASALGLH 384
Query: 168 -YSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKL-- 224
Y IIKHPMD ST+K K++N DY+ +E + +LM +N YN P+ A+KL
Sbjct: 385 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQD 444
Query: 225 -LHSGMKILSQERIQ--SLKQSIDFMADLQKTRKQKDGTDTSQSGEDGGCWQREREDSGD 281
+ E ++ L S L K+ + + + +S + + E ED D
Sbjct: 445 VFEFRYAKMPDEPLEPGPLPVSTAMPPGLAKSSSE---SSSEESSSESSSEEEEEEDEED 501
Query: 282 AEAHAFKSPSKENKK 296
E +S E ++
Sbjct: 502 EEEEESESSDSEEER 516
Score = 52.0 bits (123), Expect = 2e-06
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKP 213
P Y IIK PMD T+K +++NN Y + E +F M TN IYNKP
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKP 158
>gi|4826806 bromodomain containing 2 [Homo sapiens]
Length = 801
Score = 64.3 bits (155), Expect = 3e-10
Identities = 56/195 (28%), Positives = 89/195 (45%), Gaps = 18/195 (9%)
Query: 116 PPEKPLTSSLAKQEEVEQTPLQEAL---NQLMRQLQRKDPSAF---FSFPVTDFIAPG-- 167
PP K L S + + ++ L E L N ++++L K +A+ F PV D A G
Sbjct: 326 PPRKDLPDSQQQHQSSKKGKLSEQLKHCNGILKELLSKKHAAYAWPFYKPV-DASALGLH 384
Query: 168 -YSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKL-- 224
Y IIKHPMD ST+K K++N DY+ +E + +LM +N YN P+ A+KL
Sbjct: 385 DYHDIIKHPMDLSTVKRKMENRDYRDAQEFAADVRLMFSNCYKYNPPDHDVVAMARKLQD 444
Query: 225 -LHSGMKILSQERIQ--SLKQSIDFMADLQKTRKQKDGTDTSQSGEDGGCWQREREDSGD 281
+ E ++ L S L K+ + + + +S + + E ED D
Sbjct: 445 VFEFRYAKMPDEPLEPGPLPVSTAMPPGLAKSSSE---SSSEESSSESSSEEEEEEDEED 501
Query: 282 AEAHAFKSPSKENKK 296
E +S E ++
Sbjct: 502 EEEEESESSDSEEER 516
Score = 52.0 bits (123), Expect = 2e-06
Identities = 23/48 (47%), Positives = 29/48 (60%)
Query: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKP 213
P Y IIK PMD T+K +++NN Y + E +F M TN IYNKP
Sbjct: 111 PDYHKIIKQPMDMGTIKRRLENNYYWAASECMQDFNTMFTNCYIYNKP 158
>gi|34452707 bromodomain containing 8 isoform 2 [Homo sapiens]
Length = 1235
Score = 62.4 bits (150), Expect = 1e-09
Identities = 69/269 (25%), Positives = 111/269 (41%), Gaps = 36/269 (13%)
Query: 33 EVTELSTGSSGHDSSLFEDKNDHD-KHKDRKRKKRKKGE--------KQIPGE---EKGR 80
E + S S H S+ ED + + +HK K+ K PGE E G
Sbjct: 577 EASPESMLSPSHGSNPIEDPLEAETQHKFEMSDSLKEESGTIFGSQIKDAPGEDEEEDGV 636
Query: 81 KRRRVKEDKKKRDR-----DRVENE---AEKD---------LQCHAPVRLDLPPEKPLTS 123
E+ K+ D+ ++NE +E D LQ H D P P +S
Sbjct: 637 SEAASLEEPKEEDQGEGYLSEMDNEPPVSESDDGFSIHNATLQSHTLA--DSIPSSPASS 694
Query: 124 SLA----KQEEVEQTPL-QEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDF 178
+ QE ++ + ++A+ + R + F PVTD IAPGY I++ PMD
Sbjct: 695 QFSVCSEDQEAIQAQKIWKKAIMLVWRAAANHRYANVFLQPVTDDIAPGYHSIVQRPMDL 754
Query: 179 STMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQ 238
ST+K+ I+N +S E + + LM NA++YN + Y A ++ ++ + Q
Sbjct: 755 STIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDVLEQIQQFLAT 814
Query: 239 SLKQSIDFMADLQKTRKQKDGTDTSQSGE 267
L K+ + +D T + E
Sbjct: 815 QLIMQTSESGISAKSLRGRDSTRKQDASE 843
Score = 44.3 bits (103), Expect = 4e-04
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 153 SAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNK 212
S+ F PV++ APGY ++K PMD +++K + +++ + + LM NA++YN
Sbjct: 1125 SSPFLKPVSERQAPGYKDVVKRPMDLTSLKRNLSKGRIRTMAQFLRDLMLMFQNAVMYND 1184
Query: 213 PETIYYKAAKKL 224
+ Y A ++
Sbjct: 1185 SDHHVYHMAVEM 1196
>gi|34452705 bromodomain containing 8 isoform 1 [Homo sapiens]
Length = 951
Score = 62.4 bits (150), Expect = 1e-09
Identities = 69/269 (25%), Positives = 111/269 (41%), Gaps = 36/269 (13%)
Query: 33 EVTELSTGSSGHDSSLFEDKNDHD-KHKDRKRKKRKKGE--------KQIPGE---EKGR 80
E + S S H S+ ED + + +HK K+ K PGE E G
Sbjct: 650 EASPESMLSPSHGSNPIEDPLEAETQHKFEMSDSLKEESGTIFGSQIKDAPGEDEEEDGV 709
Query: 81 KRRRVKEDKKKRDR-----DRVENE---AEKD---------LQCHAPVRLDLPPEKPLTS 123
E+ K+ D+ ++NE +E D LQ H D P P +S
Sbjct: 710 SEAASLEEPKEEDQGEGYLSEMDNEPPVSESDDGFSIHNATLQSHTLA--DSIPSSPASS 767
Query: 124 SLA----KQEEVEQTPL-QEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDF 178
+ QE ++ + ++A+ + R + F PVTD IAPGY I++ PMD
Sbjct: 768 QFSVCSEDQEAIQAQKIWKKAIMLVWRAAANHRYANVFLQPVTDDIAPGYHSIVQRPMDL 827
Query: 179 STMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQ 238
ST+K+ I+N +S E + + LM NA++YN + Y A ++ ++ + Q
Sbjct: 828 STIKKNIENGLIRSTAEFQRDIMLMFQNAVMYNSSDHDVYHMAVEMQRDVLEQIQQFLAT 887
Query: 239 SLKQSIDFMADLQKTRKQKDGTDTSQSGE 267
L K+ + +D T + E
Sbjct: 888 QLIMQTSESGISAKSLRGRDSTRKQDASE 916
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 61.6 bits (148), Expect = 2e-09
Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 48/249 (19%)
Query: 57 KHKDRKRKKRKKGEKQIPGEEKGRKRRRVKEDKKKRDRDRVENEAEKDLQCHAPVRLDLP 116
K RKRK+ P R R K+D+ K+ + R AEK L
Sbjct: 1374 KKSSRKRKRDSDAGSSTPTTST---RSRDKDDESKKQKKRGRPPAEK-----------LS 1419
Query: 117 PEKP-LTSSLAKQEEVEQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHP 175
P P LT + K + +A+ + R+ F P + P Y +I+ P
Sbjct: 1420 PNPPNLTKKMKK--------IVDAVIKYKDSSGRQLSEVFIQLPSRKEL-PEYYELIRKP 1470
Query: 176 MDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQE 235
+DF +KE+I+N+ Y+S+ +L+ + L+C NA +N ++ Y+ + I+ Q
Sbjct: 1471 VDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDS---------IVLQS 1521
Query: 236 RIQSLKQSIDFMADLQKTRKQKDGTDTSQSGEDGGCWQREREDSGDAEAHAFKSPSK-EN 294
S++Q I+ ++D ++ +S E+ + E+ ++E+ + K K
Sbjct: 1522 VFTSVRQKIE----------KEDDSEGEESEEE----EEGEEEGSESESRSVKVKIKLGR 1567
Query: 295 KKKDKDMLE 303
K+K +D L+
Sbjct: 1568 KEKAQDRLK 1576
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 61.6 bits (148), Expect = 2e-09
Identities = 60/249 (24%), Positives = 109/249 (43%), Gaps = 48/249 (19%)
Query: 57 KHKDRKRKKRKKGEKQIPGEEKGRKRRRVKEDKKKRDRDRVENEAEKDLQCHAPVRLDLP 116
K RKRK+ P R R K+D+ K+ + R AEK L
Sbjct: 1377 KKSSRKRKRDSDAGSSTPTTST---RSRDKDDESKKQKKRGRPPAEK-----------LS 1422
Query: 117 PEKP-LTSSLAKQEEVEQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHP 175
P P LT + K + +A+ + R+ F P + P Y +I+ P
Sbjct: 1423 PNPPNLTKKMKK--------IVDAVIKYKDSSGRQLSEVFIQLPSRKEL-PEYYELIRKP 1473
Query: 176 MDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQE 235
+DF +KE+I+N+ Y+S+ +L+ + L+C NA +N ++ Y+ + I+ Q
Sbjct: 1474 VDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDS---------IVLQS 1524
Query: 236 RIQSLKQSIDFMADLQKTRKQKDGTDTSQSGEDGGCWQREREDSGDAEAHAFKSPSK-EN 294
S++Q I+ ++D ++ +S E+ + E+ ++E+ + K K
Sbjct: 1525 VFTSVRQKIE----------KEDDSEGEESEEE----EEGEEEGSESESRSVKVKIKLGR 1570
Query: 295 KKKDKDMLE 303
K+K +D L+
Sbjct: 1571 KEKAQDRLK 1579
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 61.2 bits (147), Expect = 3e-09
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 45/248 (18%)
Query: 57 KHKDRKRKKRKKGEKQIPGEEKGRKRRRVKEDKKKRDRDRVENEAEKDLQCHAPVRLDLP 116
K RKRK+ P R R K+D+ K+ + R AEK L
Sbjct: 1439 KKSSRKRKRDSDAGSSTPTTST---RSRDKDDESKKQKKRGRPPAEK-----------LS 1484
Query: 117 PEKPLTSSLAKQEEVEQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPM 176
P P + K +++ ++ + RQL F P + P Y +I+ P+
Sbjct: 1485 PNPP--NLTKKMKKIVDAVIKYKDSSSGRQLS----EVFIQLPSRKEL-PEYYELIRKPV 1537
Query: 177 DFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQER 236
DF +KE+I+N+ Y+S+ +L+ + L+C NA +N ++ Y+ + I+ Q
Sbjct: 1538 DFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDS---------IVLQSV 1588
Query: 237 IQSLKQSIDFMADLQKTRKQKDGTDTSQSGEDGGCWQREREDSGDAEAHAFKSPSK-ENK 295
S++Q I+ ++D ++ +S E+ + E+ ++E+ + K K K
Sbjct: 1589 FTSVRQKIE----------KEDDSEGEESEEE----EEGEEEGSESESRSVKVKIKLGRK 1634
Query: 296 KKDKDMLE 303
+K +D L+
Sbjct: 1635 EKAQDRLK 1642
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 61.2 bits (147), Expect = 3e-09
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 45/248 (18%)
Query: 57 KHKDRKRKKRKKGEKQIPGEEKGRKRRRVKEDKKKRDRDRVENEAEKDLQCHAPVRLDLP 116
K RKRK+ P R R K+D+ K+ + R AEK L
Sbjct: 1374 KKSSRKRKRDSDAGSSTPTTST---RSRDKDDESKKQKKRGRPPAEK-----------LS 1419
Query: 117 PEKPLTSSLAKQEEVEQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPM 176
P P + K +++ ++ + RQL F P + P Y +I+ P+
Sbjct: 1420 PNPP--NLTKKMKKIVDAVIKYKDSSSGRQLS----EVFIQLPSRKEL-PEYYELIRKPV 1472
Query: 177 DFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQER 236
DF +KE+I+N+ Y+S+ +L+ + L+C NA +N ++ Y+ + I+ Q
Sbjct: 1473 DFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDS---------IVLQSV 1523
Query: 237 IQSLKQSIDFMADLQKTRKQKDGTDTSQSGEDGGCWQREREDSGDAEAHAFKSPSK-ENK 295
S++Q I+ ++D ++ +S E+ + E+ ++E+ + K K K
Sbjct: 1524 FTSVRQKIE----------KEDDSEGEESEEE----EEGEEEGSESESRSVKVKIKLGRK 1569
Query: 296 KKDKDMLE 303
+K +D L+
Sbjct: 1570 EKAQDRLK 1577
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 61.2 bits (147), Expect = 3e-09
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 45/248 (18%)
Query: 57 KHKDRKRKKRKKGEKQIPGEEKGRKRRRVKEDKKKRDRDRVENEAEKDLQCHAPVRLDLP 116
K RKRK+ P R R K+D+ K+ + R AEK L
Sbjct: 1377 KKSSRKRKRDSDAGSSTPTTST---RSRDKDDESKKQKKRGRPPAEK-----------LS 1422
Query: 117 PEKPLTSSLAKQEEVEQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPM 176
P P + K +++ ++ + RQL F P + P Y +I+ P+
Sbjct: 1423 PNPP--NLTKKMKKIVDAVIKYKDSSSGRQLS----EVFIQLPSRKEL-PEYYELIRKPV 1475
Query: 177 DFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQER 236
DF +KE+I+N+ Y+S+ +L+ + L+C NA +N ++ Y+ + I+ Q
Sbjct: 1476 DFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDS---------IVLQSV 1526
Query: 237 IQSLKQSIDFMADLQKTRKQKDGTDTSQSGEDGGCWQREREDSGDAEAHAFKSPSK-ENK 295
S++Q I+ ++D ++ +S E+ + E+ ++E+ + K K K
Sbjct: 1527 FTSVRQKIE----------KEDDSEGEESEEE----EEGEEEGSESESRSVKVKIKLGRK 1572
Query: 296 KKDKDMLE 303
+K +D L+
Sbjct: 1573 EKAQDRLK 1580
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 61.2 bits (147), Expect = 3e-09
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 45/248 (18%)
Query: 57 KHKDRKRKKRKKGEKQIPGEEKGRKRRRVKEDKKKRDRDRVENEAEKDLQCHAPVRLDLP 116
K RKRK+ P R R K+D+ K+ + R AEK L
Sbjct: 1407 KKSSRKRKRDSDAGSSTPTTST---RSRDKDDESKKQKKRGRPPAEK-----------LS 1452
Query: 117 PEKPLTSSLAKQEEVEQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPM 176
P P + K +++ ++ + RQL F P + P Y +I+ P+
Sbjct: 1453 PNPP--NLTKKMKKIVDAVIKYKDSSSGRQLS----EVFIQLPSRKEL-PEYYELIRKPV 1505
Query: 177 DFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQER 236
DF +KE+I+N+ Y+S+ +L+ + L+C NA +N ++ Y+ + I+ Q
Sbjct: 1506 DFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDS---------IVLQSV 1556
Query: 237 IQSLKQSIDFMADLQKTRKQKDGTDTSQSGEDGGCWQREREDSGDAEAHAFKSPSK-ENK 295
S++Q I+ ++D ++ +S E+ + E+ ++E+ + K K K
Sbjct: 1557 FTSVRQKIE----------KEDDSEGEESEEE----EEGEEEGSESESRSVKVKIKLGRK 1602
Query: 296 KKDKDMLE 303
+K +D L+
Sbjct: 1603 EKAQDRLK 1610
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 61.2 bits (147), Expect = 3e-09
Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 45/248 (18%)
Query: 57 KHKDRKRKKRKKGEKQIPGEEKGRKRRRVKEDKKKRDRDRVENEAEKDLQCHAPVRLDLP 116
K RKRK+ P R R K+D+ K+ + R AEK L
Sbjct: 1407 KKSSRKRKRDSDAGSSTPTTST---RSRDKDDESKKQKKRGRPPAEK-----------LS 1452
Query: 117 PEKPLTSSLAKQEEVEQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPM 176
P P + K +++ ++ + RQL F P + P Y +I+ P+
Sbjct: 1453 PNPP--NLTKKMKKIVDAVIKYKDSSSGRQLS----EVFIQLPSRKEL-PEYYELIRKPV 1505
Query: 177 DFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQER 236
DF +KE+I+N+ Y+S+ +L+ + L+C NA +N ++ Y+ + I+ Q
Sbjct: 1506 DFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDS---------IVLQSV 1556
Query: 237 IQSLKQSIDFMADLQKTRKQKDGTDTSQSGEDGGCWQREREDSGDAEAHAFKSPSK-ENK 295
S++Q I+ ++D ++ +S E+ + E+ ++E+ + K K K
Sbjct: 1557 FTSVRQKIE----------KEDDSEGEESEEE----EEGEEEGSESESRSVKVKIKLGRK 1602
Query: 296 KKDKDMLE 303
+K +D L+
Sbjct: 1603 EKAQDRLK 1610
>gi|40805843 K(lysine) acetyltransferase 2B [Homo sapiens]
Length = 832
Score = 59.3 bits (142), Expect = 1e-08
Identities = 33/97 (34%), Positives = 50/97 (51%)
Query: 128 QEEVEQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKN 187
+E + L L +++Q++ + F PV APGY +I+ PMD TM E++KN
Sbjct: 720 KEPRDPDQLYSTLKSILQQVKSHQSAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLKN 779
Query: 188 NDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKL 224
Y S + + + + TN YN PE+ YYK A L
Sbjct: 780 RYYVSKKLFMADLQRVFTNCKEYNPPESEYYKCANIL 816
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 58.9 bits (141), Expect = 1e-08
Identities = 57/216 (26%), Positives = 95/216 (43%), Gaps = 16/216 (7%)
Query: 38 STGSSGHDSSLFEDKNDHDKHKDRKRKKRKKGEKQIPGEEKGRKRRRVKEDKKKRDRDRV 97
ST S+ +S +K ++ K + + + ++ P + + K + K +
Sbjct: 956 STSSTEVNSQAIAEKQPS---QEVKMEAKMEVDQPEPADTQPEDISESKVEDCKMESTET 1012
Query: 98 ENEAEKDLQCHAPVRLDLPPEKPLTSSLA----KQEEVEQTPLQEALNQLMRQLQRKDPS 153
E E +L+ D P SS A K++ + L++AL + L R+DP
Sbjct: 1013 E-ERSTELKTEIKEEEDQPSTSATQSSPAPGQSKKKIFKPEELRQALMPTLEALYRQDPE 1071
Query: 154 AF-FSFPVTDFIA--PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIY 210
+ F PV + P Y I+K PMD ST+K K+ YQ + D+ LM NA +Y
Sbjct: 1072 SLPFRQPVDPQLLGIPDYFDIVKSPMDLSTIKRKLDTGQYQEPWQYVDDIWLMFNNAWLY 1131
Query: 211 NKPETIYYKAAKKLLHSGMKILSQERIQSLKQSIDF 246
N+ + YK KL ++ QE I + QS+ +
Sbjct: 1132 NRKTSRVYKYCSKL----SEVFEQE-IDPVMQSLGY 1162
>gi|30794372 polybromo 1 isoform 1 [Homo sapiens]
Length = 1602
Score = 58.5 bits (140), Expect = 2e-08
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 12/121 (9%)
Query: 123 SSLAKQEEVEQTPLQEALNQLMRQLQ-------RKDPSAFFSFPVTDFIAPGYSMIIKHP 175
S ++ ++ TP+Q+ LN++ ++ R+ + F P + P Y + IK P
Sbjct: 613 SGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSEL-PDYYLTIKKP 671
Query: 176 MDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQE 235
MD ++ + N YQ I+ + ++F +M NA YN+PE++ YK A +LH K+L +
Sbjct: 672 MDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDA-LVLH---KVLLET 727
Query: 236 R 236
R
Sbjct: 728 R 728
Score = 48.9 bits (115), Expect = 1e-05
Identities = 39/133 (29%), Positives = 65/133 (48%), Gaps = 13/133 (9%)
Query: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAA---K 222
P Y IIK P+D T+ ++I+N Y+SI + + L+ NA YN+P + +K A K
Sbjct: 218 PDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIK 277
Query: 223 KLLHSGMKILSQERIQSLKQSIDFMADLQKTRKQKDGTDT------SQSGEDGGCWQRER 276
K+ + MK E + K S+ M++ + + + T S+S ED R
Sbjct: 278 KIFY--MKKAEIEHHEMAKSSLR-MSNKRAVQGGRLSAITMALQYGSESEEDAAL-AAAR 333
Query: 277 EDSGDAEAHAFKS 289
+ G++EA + S
Sbjct: 334 YEEGESEAESITS 346
Score = 47.4 bits (111), Expect = 4e-05
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKL 224
P Y ++ P+D +++K+K +Y + L +F+L+ NA Y KP++ YKAA KL
Sbjct: 82 PDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKL 140
Score = 46.2 bits (108), Expect = 9e-05
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKL 224
P Y IK P+ ++ K+KN +Y++++ L+ + LM NA YN P + YK KL
Sbjct: 386 PDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKL 444
Score = 40.4 bits (93), Expect = 0.005
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225
P Y II PMD ++ I+N+ Y E + ++ KLM NA YN+ + Y A
Sbjct: 524 PDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDA---- 579
Query: 226 HSGMKILSQER 236
H K+L ++R
Sbjct: 580 HILEKLLKEKR 590
>gi|93102371 polybromo 1 isoform 2 [Homo sapiens]
Length = 1582
Score = 58.5 bits (140), Expect = 2e-08
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 12/121 (9%)
Query: 123 SSLAKQEEVEQTPLQEALNQLMRQLQ-------RKDPSAFFSFPVTDFIAPGYSMIIKHP 175
S ++ ++ TP+Q+ LN++ ++ R+ + F P + P Y + IK P
Sbjct: 645 SGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSEL-PDYYLTIKKP 703
Query: 176 MDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQE 235
MD ++ + N YQ I+ + ++F +M NA YN+PE++ YK A +LH K+L +
Sbjct: 704 MDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDA-LVLH---KVLLET 759
Query: 236 R 236
R
Sbjct: 760 R 760
Score = 48.5 bits (114), Expect = 2e-05
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAA---K 222
P Y IIK P+D T+ ++I+N Y+SI + + L+ NA YN+P + +K A K
Sbjct: 218 PDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIK 277
Query: 223 KLLHSGMKILSQERIQSLKQSI 244
K+ + MK E + K S+
Sbjct: 278 KIFY--MKKAEIEHHEMAKSSL 297
Score = 47.4 bits (111), Expect = 4e-05
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKL 224
P Y ++ P+D +++K+K +Y + L +F+L+ NA Y KP++ YKAA KL
Sbjct: 82 PDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKL 140
Score = 46.2 bits (108), Expect = 9e-05
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKL 224
P Y IK P+ ++ K+KN +Y++++ L+ + LM NA YN P + YK KL
Sbjct: 418 PDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKL 476
Score = 40.4 bits (93), Expect = 0.005
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225
P Y II PMD ++ I+N+ Y E + ++ KLM NA YN+ + Y A
Sbjct: 556 PDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDA---- 611
Query: 226 HSGMKILSQER 236
H K+L ++R
Sbjct: 612 HILEKLLKEKR 622
>gi|41281917 polybromo 1 isoform 4 [Homo sapiens]
Length = 1582
Score = 58.5 bits (140), Expect = 2e-08
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 12/121 (9%)
Query: 123 SSLAKQEEVEQTPLQEALNQLMRQLQ-------RKDPSAFFSFPVTDFIAPGYSMIIKHP 175
S ++ ++ TP+Q+ LN++ ++ R+ + F P + P Y + IK P
Sbjct: 645 SGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSEL-PDYYLTIKKP 703
Query: 176 MDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQE 235
MD ++ + N YQ I+ + ++F +M NA YN+PE++ YK A +LH K+L +
Sbjct: 704 MDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDA-LVLH---KVLLET 759
Query: 236 R 236
R
Sbjct: 760 R 760
Score = 48.5 bits (114), Expect = 2e-05
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAA---K 222
P Y IIK P+D T+ ++I+N Y+SI + + L+ NA YN+P + +K A K
Sbjct: 218 PDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIK 277
Query: 223 KLLHSGMKILSQERIQSLKQSI 244
K+ + MK E + K S+
Sbjct: 278 KIFY--MKKAEIEHHEMAKSSL 297
Score = 47.4 bits (111), Expect = 4e-05
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKL 224
P Y ++ P+D +++K+K +Y + L +F+L+ NA Y KP++ YKAA KL
Sbjct: 82 PDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKL 140
Score = 46.2 bits (108), Expect = 9e-05
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKL 224
P Y IK P+ ++ K+KN +Y++++ L+ + LM NA YN P + YK KL
Sbjct: 418 PDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKL 476
Score = 40.4 bits (93), Expect = 0.005
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225
P Y II PMD ++ I+N+ Y E + ++ KLM NA YN+ + Y A
Sbjct: 556 PDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDA---- 611
Query: 226 HSGMKILSQER 236
H K+L ++R
Sbjct: 612 HILEKLLKEKR 622
>gi|20357588 TBP-associated factor 1 isoform 2 [Homo sapiens]
Length = 1872
Score = 58.2 bits (139), Expect = 2e-08
Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 129 EEVEQTPLQEALNQLMRQLQRKDPSAF-FSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKN 187
++ +Q L+ ++ Q P ++ F PV P Y +I +PMD T+++ I
Sbjct: 1500 DDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISK 1559
Query: 188 NDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQ--ERIQSLKQSI 244
+ YQS E D+ L+ N++ YN PE+ Y K A+++++ + L++ E + L++ I
Sbjct: 1560 HKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDI 1618
Score = 48.5 bits (114), Expect = 2e-05
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 131 VEQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDY 190
V + + E++ MR L P F PV + Y II PMD T++E ++ Y
Sbjct: 1383 VTLSSILESIINDMRDLPNTYP---FHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLY 1439
Query: 191 QSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQSLKQSIDFMADL 250
S EE +++ +L+ N+ YN P+ + ++ +L L E+ LK+ D +A L
Sbjct: 1440 PSREEFREHLELIVKNSATYNGPKHSLTQISQSMLD-----LCDEK---LKEKEDKLARL 1491
Query: 251 QK 252
+K
Sbjct: 1492 EK 1493
Score = 34.3 bits (77), Expect = 0.37
Identities = 19/105 (18%), Positives = 57/105 (54%), Gaps = 16/105 (15%)
Query: 56 DKHKDRKRKKRKKGEKQIPGEEKGRKRRRVKEDKKKRDRDRVENEAEKDLQCHA------ 109
++H++ RK+R++ ++Q+ ++ +++ ++K +K+ + +++ + L+C A
Sbjct: 1214 EQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPK-KMKERPDLKLKCGACGAIGH 1272
Query: 110 -------PV--RLDLPPEKPLTSSLAKQEEVEQTPLQEALNQLMR 145
P+ + + PP P+ + ++EE+E+T + +L++
Sbjct: 1273 MRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIK 1317
>gi|20357585 TBP-associated factor 1 isoform 1 [Homo sapiens]
Length = 1893
Score = 58.2 bits (139), Expect = 2e-08
Identities = 33/119 (27%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 129 EEVEQTPLQEALNQLMRQLQRKDPSAF-FSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKN 187
++ +Q L+ ++ Q P ++ F PV P Y +I +PMD T+++ I
Sbjct: 1521 DDDDQVAFSFILDNIVTQKMMAVPDSWPFHHPVNKKFVPDYYKVIVNPMDLETIRKNISK 1580
Query: 188 NDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQ--ERIQSLKQSI 244
+ YQS E D+ L+ N++ YN PE+ Y K A+++++ + L++ E + L++ I
Sbjct: 1581 HKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQTLTEYDEHLTQLEKDI 1639
Score = 48.5 bits (114), Expect = 2e-05
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 11/122 (9%)
Query: 131 VEQTPLQEALNQLMRQLQRKDPSAFFSFPVTDFIAPGYSMIIKHPMDFSTMKEKIKNNDY 190
V + + E++ MR L P F PV + Y II PMD T++E ++ Y
Sbjct: 1404 VTLSSILESIINDMRDLPNTYP---FHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLY 1460
Query: 191 QSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQERIQSLKQSIDFMADL 250
S EE +++ +L+ N+ YN P+ + ++ +L L E+ LK+ D +A L
Sbjct: 1461 PSREEFREHLELIVKNSATYNGPKHSLTQISQSMLD-----LCDEK---LKEKEDKLARL 1512
Query: 251 QK 252
+K
Sbjct: 1513 EK 1514
Score = 34.3 bits (77), Expect = 0.37
Identities = 19/105 (18%), Positives = 57/105 (54%), Gaps = 16/105 (15%)
Query: 56 DKHKDRKRKKRKKGEKQIPGEEKGRKRRRVKEDKKKRDRDRVENEAEKDLQCHA------ 109
++H++ RK+R++ ++Q+ ++ +++ ++K +K+ + +++ + L+C A
Sbjct: 1235 EQHREEMRKERRRIQEQLRRLKRNQEKEKLKGPPEKKPK-KMKERPDLKLKCGACGAIGH 1293
Query: 110 -------PV--RLDLPPEKPLTSSLAKQEEVEQTPLQEALNQLMR 145
P+ + + PP P+ + ++EE+E+T + +L++
Sbjct: 1294 MRTNKFCPLYYQTNAPPSNPVAMTEEQEEELEKTVIHNDNEELIK 1338
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.131 0.370
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,882,893
Number of Sequences: 37866
Number of extensions: 1294212
Number of successful extensions: 10237
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 217
Number of HSP's successfully gapped in prelim test: 334
Number of HSP's that attempted gapping in prelim test: 5961
Number of HSP's gapped (non-prelim): 3127
length of query: 651
length of database: 18,247,518
effective HSP length: 109
effective length of query: 542
effective length of database: 14,120,124
effective search space: 7653107208
effective search space used: 7653107208
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.