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Search of human proteins with 41281917
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|41281917 polybromo 1 isoform 4 [Homo sapiens]
(1582 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|41281917 polybromo 1 isoform 4 [Homo sapiens] 3200 0.0
gi|30794372 polybromo 1 isoform 1 [Homo sapiens] 3093 0.0
gi|93102371 polybromo 1 isoform 2 [Homo sapiens] 3034 0.0
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r... 103 1e-21
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r... 103 1e-21
gi|48255898 SWI/SNF-related matrix-associated actin-dependent re... 100 1e-20
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r... 99 3e-20
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r... 99 3e-20
gi|192807314 SWI/SNF-related matrix-associated actin-dependent r... 99 3e-20
gi|192807312 SWI/SNF-related matrix-associated actin-dependent r... 99 3e-20
gi|21071056 SWI/SNF-related matrix-associated actin-dependent re... 99 3e-20
gi|46399200 testis-specific bromodomain protein [Homo sapiens] 94 1e-18
gi|46399198 testis-specific bromodomain protein [Homo sapiens] 94 1e-18
gi|48255900 SWI/SNF-related matrix-associated actin-dependent re... 90 2e-17
gi|110349788 absent, small, or homeotic 1-like [Homo sapiens] 86 4e-16
gi|20357588 TBP-associated factor 1 isoform 2 [Homo sapiens] 84 1e-15
gi|20357585 TBP-associated factor 1 isoform 1 [Homo sapiens] 84 1e-15
gi|24429572 TBP-associated factor RNA polymerase 1-like [Homo sa... 81 7e-15
gi|16445438 bromodomain and WD repeat domain containing 1 isofor... 75 7e-13
gi|16445436 bromodomain and WD repeat domain containing 1 isofor... 75 7e-13
gi|34996489 pleckstrin homology domain interacting protein [Homo... 74 1e-12
gi|40805843 K(lysine) acetyltransferase 2B [Homo sapiens] 60 1e-08
gi|11067749 bromodomain containing protein 3 [Homo sapiens] 60 2e-08
gi|7657218 bromodomain-containing protein 4 isoform short [Homo ... 59 3e-08
gi|19718731 bromodomain-containing protein 4 isoform long [Homo ... 59 3e-08
gi|153791535 general control of amino acid synthesis 5-like 2 [H... 59 3e-08
gi|153791630 bromodomain and WD repeat domain containing 3 [Homo... 59 4e-08
gi|41350212 bromodomain containing 7 [Homo sapiens] 59 5e-08
gi|237649104 bromodomain containing 9 isoform 1 [Homo sapiens] 58 6e-08
gi|119943102 CREB binding protein isoform b [Homo sapiens] 58 6e-08
>gi|41281917 polybromo 1 isoform 4 [Homo sapiens]
Length = 1582
Score = 3200 bits (8298), Expect = 0.0
Identities = 1582/1582 (100%), Positives = 1582/1582 (100%)
Query: 1 MGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDY 60
MGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDY
Sbjct: 1 MGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDY 60
Query: 61 KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLF 120
KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLF
Sbjct: 61 KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLF 120
Query: 121 NNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPA 180
NNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPA
Sbjct: 121 NNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPA 180
Query: 181 YLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNG 240
YLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNG
Sbjct: 181 YLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNG 240
Query: 241 SYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAEIEHHEMAKSSLRMR 300
SYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAEIEHHEMAKSSLRMR
Sbjct: 241 SYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAEIEHHEMAKSSLRMR 300
Query: 301 TPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNKRAVQGGRLSAITMALQYGSESEEDAA 360
TPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNKRAVQGGRLSAITMALQYGSESEEDAA
Sbjct: 301 TPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNKRAVQGGRLSAITMALQYGSESEEDAA 360
Query: 361 LAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNNQGQLIAEPFYHLPSKKKYPDY 420
LAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNNQGQLIAEPFYHLPSKKKYPDY
Sbjct: 361 LAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNNQGQLIAEPFYHLPSKKKYPDY 420
Query: 421 YQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVM 480
YQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVM
Sbjct: 421 YQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVM 480
Query: 481 QAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGR 540
QAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGR
Sbjct: 481 QAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGR 540
Query: 541 RLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHY 600
RLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHY
Sbjct: 541 RLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHY 600
Query: 601 NEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPMQQ 660
NEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPMQQ
Sbjct: 601 NEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPMQQ 660
Query: 661 KLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQD 720
KLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQD
Sbjct: 661 KLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQD 720
Query: 721 IDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQE 780
IDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQE
Sbjct: 721 IDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQE 780
Query: 781 LIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLF 840
LIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLF
Sbjct: 781 LIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLF 840
Query: 841 QEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHN 900
QEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHN
Sbjct: 841 QEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHN 900
Query: 901 DVEKERKEKLPKEIEEDKLKREEEKREAEKSEDSSGAAGLSGLHRTYSQDCSFKNSMYHV 960
DVEKERKEKLPKEIEEDKLKREEEKREAEKSEDSSGAAGLSGLHRTYSQDCSFKNSMYHV
Sbjct: 901 DVEKERKEKLPKEIEEDKLKREEEKREAEKSEDSSGAAGLSGLHRTYSQDCSFKNSMYHV 960
Query: 961 GDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKS 1020
GDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKS
Sbjct: 961 GDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKS 1020
Query: 1021 DYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPI 1080
DYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPI
Sbjct: 1021 DYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPI 1080
Query: 1081 SSVRFVPRDVPLPVVRVASVFANADKGDDEKNTDNSEDSRAEDNFNLEKEKEDVPVEMSN 1140
SSVRFVPRDVPLPVVRVASVFANADKGDDEKNTDNSEDSRAEDNFNLEKEKEDVPVEMSN
Sbjct: 1081 SSVRFVPRDVPLPVVRVASVFANADKGDDEKNTDNSEDSRAEDNFNLEKEKEDVPVEMSN 1140
Query: 1141 GEPGCHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVRDGAAYFYGPIFIHPE 1200
GEPGCHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVRDGAAYFYGPIFIHPE
Sbjct: 1141 GEPGCHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVRDGAAYFYGPIFIHPE 1200
Query: 1201 ETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEIPENDILLCESR 1260
ETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEIPENDILLCESR
Sbjct: 1201 ETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEIPENDILLCESR 1260
Query: 1261 YNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEPSPLLEKKIQLLEAKFAELE 1320
YNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEPSPLLEKKIQLLEAKFAELE
Sbjct: 1261 YNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEPSPLLEKKIQLLEAKFAELE 1320
Query: 1321 GGDDDIEEMGEEDSEVIEPPSLPQLQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRK 1380
GGDDDIEEMGEEDSEVIEPPSLPQLQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRK
Sbjct: 1321 GGDDDIEEMGEEDSEVIEPPSLPQLQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRK 1380
Query: 1381 INMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLETAKKAEYEGVMNQGVAPMV 1440
INMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLETAKKAEYEGVMNQGVAPMV
Sbjct: 1381 INMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLETAKKAEYEGVMNQGVAPMV 1440
Query: 1441 GTPAPGGSPYGQQVGVLGPPGQQAPPPYPGPHPAGPPVIQQPTTPMFVAPPPKTQRLLHS 1500
GTPAPGGSPYGQQVGVLGPPGQQAPPPYPGPHPAGPPVIQQPTTPMFVAPPPKTQRLLHS
Sbjct: 1441 GTPAPGGSPYGQQVGVLGPPGQQAPPPYPGPHPAGPPVIQQPTTPMFVAPPPKTQRLLHS 1500
Query: 1501 EAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALW 1560
EAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALW
Sbjct: 1501 EAYLKYIEGLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALW 1560
Query: 1561 RLRDLMLRDTLNIRQAYNLENV 1582
RLRDLMLRDTLNIRQAYNLENV
Sbjct: 1561 RLRDLMLRDTLNIRQAYNLENV 1582
>gi|30794372 polybromo 1 isoform 1 [Homo sapiens]
Length = 1602
Score = 3093 bits (8019), Expect = 0.0
Identities = 1549/1634 (94%), Positives = 1549/1634 (94%), Gaps = 84/1634 (5%)
Query: 1 MGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDY 60
MGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDY
Sbjct: 1 MGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDY 60
Query: 61 KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLF 120
KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLF
Sbjct: 61 KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLF 120
Query: 121 NNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPA 180
NNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPA
Sbjct: 121 NNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPA 180
Query: 181 YLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNG 240
YLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNG
Sbjct: 181 YLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNG 240
Query: 241 SYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAEIEHHEMAKSSLRMR 300
SYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAEIEHHEMAKSSLRM
Sbjct: 241 SYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAEIEHHEMAKSSLRMS 300
Query: 301 TPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNKRAVQGGRLSAITMALQYGSESEEDAA 360
NKRAVQGGRLSAITMALQYGSESEEDAA
Sbjct: 301 --------------------------------NKRAVQGGRLSAITMALQYGSESEEDAA 328
Query: 361 LAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNNQGQLIAEPFYHLPSKKKYPDY 420
LAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNNQGQLIAEPFYHLPSKKKYPDY
Sbjct: 329 LAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNNQGQLIAEPFYHLPSKKKYPDY 388
Query: 421 YQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVM 480
YQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVM
Sbjct: 389 YQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVM 448
Query: 481 QAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGR 540
QAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGR
Sbjct: 449 QAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGR 508
Query: 541 RLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHY 600
RLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHY
Sbjct: 509 RLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHY 568
Query: 601 NEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPMQQ 660
NEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPMQQ
Sbjct: 569 NEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPMQQ 628
Query: 661 KLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQD 720
KLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQD
Sbjct: 629 KLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQD 688
Query: 721 IDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQE 780
IDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQE
Sbjct: 689 IDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQE 748
Query: 781 LIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLF 840
LIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLF
Sbjct: 749 LIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLF 808
Query: 841 QEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHN 900
QEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHN
Sbjct: 809 QEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHN 868
Query: 901 DVEKERKEKLPKEIEEDKLKREEEKREAEKSEDSSGAAGLSGLHRTYSQDCSFKNSMYHV 960
DVEKERKEKLPKEIEEDKLKREEEKREAEKSEDSSGAAGLSGLHRTYSQDCSFKNSMYHV
Sbjct: 869 DVEKERKEKLPKEIEEDKLKREEEKREAEKSEDSSGAAGLSGLHRTYSQDCSFKNSMYHV 928
Query: 961 GDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKS 1020
GDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKS
Sbjct: 929 GDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKS 988
Query: 1021 DYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPI 1080
DYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPI
Sbjct: 989 DYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPI 1048
Query: 1081 SSVRFVPRDVPLPVVRVASVFANADKGDDEKNTDNSEDSRAEDNFNLEKEKEDVPVEMSN 1140
SSVRFVPRDVPLPVVRVASVFANADKGDDEKNTDNSEDSRAEDNFNLEKEKEDVPVEMSN
Sbjct: 1049 SSVRFVPRDVPLPVVRVASVFANADKGDDEKNTDNSEDSRAEDNFNLEKEKEDVPVEMSN 1108
Query: 1141 GEPGCHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVRDGAAYFYGPIFIHPE 1200
GEPGCHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVRDGAAYFYGPIFIHPE
Sbjct: 1109 GEPGCHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVRDGAAYFYGPIFIHPE 1168
Query: 1201 ETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEIPENDILLCESR 1260
ETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEIPENDILLCESR
Sbjct: 1169 ETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEIPENDILLCESR 1228
Query: 1261 YNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEPSPLLEKKIQLLEAKFAELE 1320
YNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEPSPLLEKKIQLLEAKFAELE
Sbjct: 1229 YNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEPSPLLEKKIQLLEAKFAELE 1288
Query: 1321 GGDDDIEEMGEEDSEVIEPPSLPQLQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRK 1380
GGDDDIEEMGEEDSEVIEPPSLPQLQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRK
Sbjct: 1289 GGDDDIEEMGEEDSEVIEPPSLPQLQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRK 1348
Query: 1381 INMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLETAKKAEYE----------- 1429
INMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLETAKKAEYE
Sbjct: 1349 INMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLETAKKAEYEGMMGGYPPGLP 1408
Query: 1430 -----------------------------------------GVMNQGVAPMVGTPAPGGS 1448
GVMNQGVAPMVGTPAPGGS
Sbjct: 1409 PLQGPVDGLVSMGSMQPLHPGGPPPHHLPPGVPGLPGIPPPGVMNQGVAPMVGTPAPGGS 1468
Query: 1449 PYGQQVGVLGPPGQQAPPPYPGPHPAGPPVIQQPTTPMFVAPPPKTQRLLHSEAYLKYIE 1508
PYGQQVGVLGPPGQQAPPPYPGPHPAGPPVIQQPTTPMFVAPPPKTQRLLHSEAYLKYIE
Sbjct: 1469 PYGQQVGVLGPPGQQAPPPYPGPHPAGPPVIQQPTTPMFVAPPPKTQRLLHSEAYLKYIE 1528
Query: 1509 GLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLR 1568
GLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLR
Sbjct: 1529 GLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLR 1588
Query: 1569 DTLNIRQAYNLENV 1582
DTLNIRQAYNLENV
Sbjct: 1589 DTLNIRQAYNLENV 1602
>gi|93102371 polybromo 1 isoform 2 [Homo sapiens]
Length = 1582
Score = 3034 bits (7867), Expect = 0.0
Identities = 1530/1634 (93%), Positives = 1530/1634 (93%), Gaps = 104/1634 (6%)
Query: 1 MGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDY 60
MGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDY
Sbjct: 1 MGSKRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDY 60
Query: 61 KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLF 120
KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLF
Sbjct: 61 KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLF 120
Query: 121 NNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPA 180
NNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPA
Sbjct: 121 NNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPA 180
Query: 181 YLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNG 240
YLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNG
Sbjct: 181 YLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNG 240
Query: 241 SYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAEIEHHEMAKSSLRMR 300
SYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAEIEHHEMAKSSLRMR
Sbjct: 241 SYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAEIEHHEMAKSSLRMR 300
Query: 301 TPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNKRAVQGGRLSAITMALQYGSESEEDAA 360
TPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNKRAVQGGRLSAITMALQYGSESEEDAA
Sbjct: 301 TPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNKRAVQGGRLSAITMALQYGSESEEDAA 360
Query: 361 LAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNNQGQLIAEPFYHLPSKKKYPDY 420
LAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNNQGQLIAEPFYHLPSKKKYPDY
Sbjct: 361 LAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSCRNNQGQLIAEPFYHLPSKKKYPDY 420
Query: 421 YQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVM 480
YQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVM
Sbjct: 421 YQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVM 480
Query: 481 QAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGR 540
QAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGR
Sbjct: 481 QAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGR 540
Query: 541 RLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHY 600
RLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHY
Sbjct: 541 RLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHY 600
Query: 601 NEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPMQQ 660
NEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPMQQ
Sbjct: 601 NEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPMQQ 660
Query: 661 KLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQD 720
KLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQD
Sbjct: 661 KLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQD 720
Query: 721 IDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQE 780
IDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQE
Sbjct: 721 IDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDSHVPNVTLLIQE 780
Query: 781 LIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLF 840
LIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLF
Sbjct: 781 LIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDPNFPNKPPLTFDIIRKNVENNRYRRLDLF 840
Query: 841 QEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHN 900
QEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHN
Sbjct: 841 QEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILLSPALSYTTKHLHN 900
Query: 901 DVEKERKEKLPKEIEEDKLKREEEKREAEKSEDSSGAAGLSGLHRTYSQDCSFKNSMYHV 960
DVEKERKEKLPKEIEEDKLKREEEKREAEKSEDSSGAAGLSGLHRTYSQDCSFKNSMYHV
Sbjct: 901 DVEKERKEKLPKEIEEDKLKREEEKREAEKSEDSSGAAGLSGLHRTYSQDCSFKNSMYHV 960
Query: 961 GDYVYVEPAEANLQPHIVCIERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKS 1020
GDYVYVEPAEANLQPHIVCIERLWEDSA EKEVFKS
Sbjct: 961 GDYVYVEPAEANLQPHIVCIERLWEDSA-------------------------EKEVFKS 995
Query: 1021 DYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPI 1080
DYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPI
Sbjct: 996 DYYNKVPVSKILGKCVVMFVKEYFKLCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPI 1055
Query: 1081 SSVRFVPRDVPLPVVRVASVFANADKGDDEKNTDNSEDSRAEDNFNLEKEKEDVPVEMSN 1140
SSVRFVPRDVPLPVVRVASVFANADKGDDEKNTDNSEDSRAEDNFNLEKEKEDVPVEMSN
Sbjct: 1056 SSVRFVPRDVPLPVVRVASVFANADKGDDEKNTDNSEDSRAEDNFNLEKEKEDVPVEMSN 1115
Query: 1141 GEPGCHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVRDGAAYFYGPIFIHPE 1200
GEPGCHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVRDGAAYFYGPIFIHPE
Sbjct: 1116 GEPGCHYFEQLHYNDMWLKVGDCVFIKSHGLVRPRVGRIEKVWVRDGAAYFYGPIFIHPE 1175
Query: 1201 ETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEIPENDILLCESR 1260
ETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEIPENDILLCESR
Sbjct: 1176 ETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCAVLSFKDFLSCRPTEIPENDILLCESR 1235
Query: 1261 YNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEPSPLLEKKIQLLEAKFAELE 1320
YNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEPSPLLEKKIQLLEAKFAELE
Sbjct: 1236 YNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKEPSPLLEKKIQLLEAKFAELE 1295
Query: 1321 GGDDDIEEMGEEDSEVIEPPSLPQLQTPLASELDLMPYTPPQSTPKSAKGSAKKEGSKRK 1380
GGDDDIEEMGEEDSE STPKSAKGSAKKEGSKRK
Sbjct: 1296 GGDDDIEEMGEEDSE---------------------------STPKSAKGSAKKEGSKRK 1328
Query: 1381 INMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLETAKKAEYE----------- 1429
INMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLETAKKAEYE
Sbjct: 1329 INMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWRNLETAKKAEYEGMMGGYPPGLP 1388
Query: 1430 -----------------------------------------GVMNQGVAPMVGTPAPGGS 1448
GVMNQGVAPMVGTPAPGGS
Sbjct: 1389 PLQGPVDGLVSMGSMQPLHPGGPPPHHLPPGVPGLPGIPPPGVMNQGVAPMVGTPAPGGS 1448
Query: 1449 PYGQQVGVLGPPGQQAPPPYPGPHPAGPPVIQQPTTPMFVAPPPKTQRLLHSEAYLKYIE 1508
PYGQQVGVLGPPGQQAPPPYPGPHPAGPPVIQQPTTPMFVAPPPKTQRLLHSEAYLKYIE
Sbjct: 1449 PYGQQVGVLGPPGQQAPPPYPGPHPAGPPVIQQPTTPMFVAPPPKTQRLLHSEAYLKYIE 1508
Query: 1509 GLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLR 1568
GLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLR
Sbjct: 1509 GLSAESNSISKWDQTLAARRRDVHLSKEQESRLPSHWLKSKGAHTTMADALWRLRDLMLR 1568
Query: 1569 DTLNIRQAYNLENV 1582
DTLNIRQAYNLENV
Sbjct: 1569 DTLNIRQAYNLENV 1582
>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform F [Homo sapiens]
Length = 1613
Score = 103 bits (257), Expect = 1e-21
Identities = 57/177 (32%), Positives = 97/177 (54%), Gaps = 9/177 (5%)
Query: 602 EEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKL-------KLSRKSGISPKKSKY 654
EEG+ + + +K KRK S + K +K G P +
Sbjct: 1360 EEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLS 1419
Query: 655 MTP--MQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSH 712
P + +K+ ++ +AV Y D GR+LS +F++LPSR ELP+YY I+KP+D +KI+
Sbjct: 1420 PNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKER 1479
Query: 713 MMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDS 769
+ +KY+ ++ + +D +++ NA T+N SLIY+D++VL V R+ +E ++DS
Sbjct: 1480 IRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1536
Score = 95.9 bits (237), Expect = 3e-19
Identities = 58/219 (26%), Positives = 112/219 (51%), Gaps = 20/219 (9%)
Query: 159 DEDDDEDGQDNQGTVTE---GSSPAYLKEILEQLLEAIVVATNPSGRLISELFQKLPSKV 215
D+DD+ Q +G +P L + ++++++A++ + SGR +SE+F +LPS+
Sbjct: 1399 DKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRK 1458
Query: 216 QYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANS 275
+ P+YY +I++P+D K I +RI+N Y+S++ + KD+ LL +NA+T+N GS +++D+
Sbjct: 1459 ELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIV 1518
Query: 276 IKKIFYMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNKR 335
++ +F + +IE + ++ G + GEE S+ K
Sbjct: 1519 LQSVFTSVRQKIEKEDDSE-----------------GEESEEEEEGEEEGSESESRSVKV 1561
Query: 336 AVQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAE 374
++ GR L+ G + A + +SE E
Sbjct: 1562 KIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEE 1600
Score = 87.0 bits (214), Expect = 1e-16
Identities = 51/187 (27%), Positives = 102/187 (54%), Gaps = 16/187 (8%)
Query: 475 KLQQVMQAKKKELARRDDIEDGDSMISSATS--DTGSAKRKSKKNIRK------------ 520
++++ ++ KK R+ D + G S +++T D +K KK R
Sbjct: 1366 EIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNL 1425
Query: 521 -QRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDK 579
++MK + + V++ ++ SGR+L ++F+ PS+K+ P+YY++I +P+D K I+ IRN K
Sbjct: 1426 TKKMKKIVDAVIKYKD-SSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHK 1484
Query: 580 YAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKL 639
Y + +D+ L+ +NA+ +N EGS +Y D+ +L+ + R+++ D + S +
Sbjct: 1485 YRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEE 1544
Query: 640 KLSRKSG 646
+ + G
Sbjct: 1545 EEGEEEG 1551
Score = 85.1 bits (209), Expect = 5e-16
Identities = 47/167 (28%), Positives = 92/167 (55%), Gaps = 3/167 (1%)
Query: 388 QLYDTVRSCRNNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDH 447
++ D V +++ G+ ++E F LPS+K+ P+YY+ I+ P+ ++I+ +++N +Y +L+
Sbjct: 1431 KIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 1490
Query: 448 LECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDT 507
LE D+ L+ +NA+ +N+ S IY+ + LQ V + ++++ + DD E +S +
Sbjct: 1491 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEE 1550
Query: 508 GSAKRKSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKD 554
GS +S+ K ++K+ + R G RR KP D
Sbjct: 1551 GS---ESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSD 1594
Score = 80.1 bits (196), Expect = 2e-14
Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 8 ATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRL 67
+T +S+ S D DD G + N P + ++ + + YKD GR
Sbjct: 1389 STPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTK--KMKKIVDAVIKYKDSSGRQ 1446
Query: 68 LCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYY 127
L E+FI+ P R+ P+YYE++ +P+D KI+++++ +Y +N L D LL NA+++
Sbjct: 1447 LSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFN 1506
Query: 128 KPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGS 177
S Y+ + L ++ R QK E +D+ + E+ ++ + EGS
Sbjct: 1507 LEGSLIYEDSIVLQSVFTSVR----QKIEKEDDSEGEESEEEEEGEEEGS 1552
Score = 52.8 bits (125), Expect = 3e-06
Identities = 38/166 (22%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 772 PNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVD--PNFPN--KPPLTFDIIRK 827
PN+T +++++ +V+ ++D GR S+ ++P+ P + + P+ F I++
Sbjct: 1423 PNLTKKMKKIVD----AVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKE 1478
Query: 828 NVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILL 887
+ N++YR L+ ++ + + + A+ N S IYED++ LQ F +R ++ K +
Sbjct: 1479 RIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDD--- 1535
Query: 888 SPALSYTTKHLHNDVEKERKEKLPKEIEEDKLKREEEKREAEKSED 933
E+E E+ E E +K + + EK++D
Sbjct: 1536 --------SEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQD 1573
Score = 32.0 bits (71), Expect = 4.9
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 17/71 (23%)
Query: 1443 PAPGGSP--YGQQVGVLGP----PGQQ-APPPYPGPHPAGPP----------VIQQPTTP 1485
P PG +P Y + G+ GP PG PP PG P GPP +TP
Sbjct: 240 PGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTP 299
Query: 1486 MFVAPPPKTQR 1496
+ PP T R
Sbjct: 300 QKLIPPQPTGR 310
>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform D [Homo sapiens]
Length = 1616
Score = 103 bits (257), Expect = 1e-21
Identities = 57/177 (32%), Positives = 97/177 (54%), Gaps = 9/177 (5%)
Query: 602 EEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKL-------KLSRKSGISPKKSKY 654
EEG+ + + +K KRK S + K +K G P +
Sbjct: 1363 EEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLS 1422
Query: 655 MTP--MQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSH 712
P + +K+ ++ +AV Y D GR+LS +F++LPSR ELP+YY I+KP+D +KI+
Sbjct: 1423 PNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKER 1482
Query: 713 MMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDS 769
+ +KY+ ++ + +D +++ NA T+N SLIY+D++VL V R+ +E ++DS
Sbjct: 1483 IRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1539
Score = 95.9 bits (237), Expect = 3e-19
Identities = 58/219 (26%), Positives = 112/219 (51%), Gaps = 20/219 (9%)
Query: 159 DEDDDEDGQDNQGTVTE---GSSPAYLKEILEQLLEAIVVATNPSGRLISELFQKLPSKV 215
D+DD+ Q +G +P L + ++++++A++ + SGR +SE+F +LPS+
Sbjct: 1402 DKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSGRQLSEVFIQLPSRK 1461
Query: 216 QYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANS 275
+ P+YY +I++P+D K I +RI+N Y+S++ + KD+ LL +NA+T+N GS +++D+
Sbjct: 1462 ELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIV 1521
Query: 276 IKKIFYMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNKR 335
++ +F + +IE + ++ G + GEE S+ K
Sbjct: 1522 LQSVFTSVRQKIEKEDDSE-----------------GEESEEEEEGEEEGSESESRSVKV 1564
Query: 336 AVQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAE 374
++ GR L+ G + A + +SE E
Sbjct: 1565 KIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEE 1603
Score = 87.0 bits (214), Expect = 1e-16
Identities = 51/187 (27%), Positives = 102/187 (54%), Gaps = 16/187 (8%)
Query: 475 KLQQVMQAKKKELARRDDIEDGDSMISSATS--DTGSAKRKSKKNIRK------------ 520
++++ ++ KK R+ D + G S +++T D +K KK R
Sbjct: 1369 EIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNL 1428
Query: 521 -QRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDK 579
++MK + + V++ ++ SGR+L ++F+ PS+K+ P+YY++I +P+D K I+ IRN K
Sbjct: 1429 TKKMKKIVDAVIKYKD-SSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHK 1487
Query: 580 YAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKL 639
Y + +D+ L+ +NA+ +N EGS +Y D+ +L+ + R+++ D + S +
Sbjct: 1488 YRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEE 1547
Query: 640 KLSRKSG 646
+ + G
Sbjct: 1548 EEGEEEG 1554
Score = 85.1 bits (209), Expect = 5e-16
Identities = 47/167 (28%), Positives = 92/167 (55%), Gaps = 3/167 (1%)
Query: 388 QLYDTVRSCRNNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDH 447
++ D V +++ G+ ++E F LPS+K+ P+YY+ I+ P+ ++I+ +++N +Y +L+
Sbjct: 1434 KIVDAVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLND 1493
Query: 448 LECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDT 507
LE D+ L+ +NA+ +N+ S IY+ + LQ V + ++++ + DD E +S +
Sbjct: 1494 LEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEE 1553
Query: 508 GSAKRKSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKD 554
GS +S+ K ++K+ + R G RR KP D
Sbjct: 1554 GS---ESESRSVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSD 1597
Score = 80.1 bits (196), Expect = 2e-14
Identities = 48/170 (28%), Positives = 86/170 (50%), Gaps = 6/170 (3%)
Query: 8 ATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRL 67
+T +S+ S D DD G + N P + ++ + + YKD GR
Sbjct: 1392 STPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTK--KMKKIVDAVIKYKDSSGRQ 1449
Query: 68 LCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYY 127
L E+FI+ P R+ P+YYE++ +P+D KI+++++ +Y +N L D LL NA+++
Sbjct: 1450 LSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFN 1509
Query: 128 KPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGS 177
S Y+ + L ++ R QK E +D+ + E+ ++ + EGS
Sbjct: 1510 LEGSLIYEDSIVLQSVFTSVR----QKIEKEDDSEGEESEEEEEGEEEGS 1555
Score = 52.8 bits (125), Expect = 3e-06
Identities = 38/166 (22%), Positives = 80/166 (48%), Gaps = 19/166 (11%)
Query: 772 PNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVD--PNFPN--KPPLTFDIIRK 827
PN+T +++++ +V+ ++D GR S+ ++P+ P + + P+ F I++
Sbjct: 1426 PNLTKKMKKIVD----AVIKYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKE 1481
Query: 828 NVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILL 887
+ N++YR L+ ++ + + + A+ N S IYED++ LQ F +R ++ K +
Sbjct: 1482 RIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDD--- 1538
Query: 888 SPALSYTTKHLHNDVEKERKEKLPKEIEEDKLKREEEKREAEKSED 933
E+E E+ E E +K + + EK++D
Sbjct: 1539 --------SEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQD 1576
Score = 32.0 bits (71), Expect = 4.9
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 17/71 (23%)
Query: 1443 PAPGGSP--YGQQVGVLGP----PGQQ-APPPYPGPHPAGPP----------VIQQPTTP 1485
P PG +P Y + G+ GP PG PP PG P GPP +TP
Sbjct: 240 PGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTP 299
Query: 1486 MFVAPPPKTQR 1496
+ PP T R
Sbjct: 300 QKLIPPQPTGR 310
>gi|48255898 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform b [Homo sapiens]
Length = 1572
Score = 100 bits (248), Expect = 1e-20
Identities = 50/153 (32%), Positives = 92/153 (60%), Gaps = 6/153 (3%)
Query: 619 KEKRKELGPLPDDDDMASPKLKLSRKSG--ISPKKSKYMTPMQQKLNEVYEAVKNYTDKR 676
+++R+ + P +D+ K + R +SP K + +++N + + V NY D
Sbjct: 1346 RKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPK----LTKQMNAIIDTVINYKDSS 1401
Query: 677 GRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNAC 736
GR+LS +F++LPSR ELP+YY I+KP+D +KI+ + +KY+ + + +D +++ +NA
Sbjct: 1402 GRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQ 1461
Query: 737 TYNEPESLIYKDALVLHKVLLETRRDLEGDEDS 769
T+N S IY+D++VL V R+ + +E+S
Sbjct: 1462 TFNLEGSQIYEDSIVLQSVFKSARQKIAKEEES 1494
Score = 89.7 bits (221), Expect = 2e-17
Identities = 47/149 (31%), Positives = 87/149 (58%), Gaps = 5/149 (3%)
Query: 146 RTRNEFVQKGEADDEDDDEDGQDNQGTVTE---GSSPAYLKEILEQLLEAIVVATNPSGR 202
R R V K A ++D E + +G +P L + + +++ ++ + SGR
Sbjct: 1346 RKRRRNVDKDPA--KEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVINYKDSSGR 1403
Query: 203 LISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTY 262
+SE+F +LPS+ + P+YY +I++P+D K I +RI+N Y+S+ + KD+ LL NA+T+
Sbjct: 1404 QLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTF 1463
Query: 263 NEPGSQVFKDANSIKKIFYMKKAEIEHHE 291
N GSQ+++D+ ++ +F + +I E
Sbjct: 1464 NLEGSQIYEDSIVLQSVFKSARQKIAKEE 1492
Score = 89.7 bits (221), Expect = 2e-17
Identities = 46/168 (27%), Positives = 97/168 (57%), Gaps = 6/168 (3%)
Query: 389 LYDTVRSCRNNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHL 448
+ DTV + +++ G+ ++E F LPS+K+ P+YY+ I+ P+ ++I+ +++N +Y +L L
Sbjct: 1390 IIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDL 1449
Query: 449 ECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTG 508
E D+ L+ NA+ +N+ S IY+ + LQ V ++ ++++A+ ++ ED S +
Sbjct: 1450 EKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESED-----ESNEEEEE 1504
Query: 509 SAKRKSKKNIRKQRMKILFNVVLE-AREPGSGRRLCDLFMVKPSKKDY 555
+ +S+ + ++KI N + R+ G G++ + KP D+
Sbjct: 1505 EDEEESESEAKSVKVKIKLNKKDDKGRDKGKGKKRPNRGKAKPVVSDF 1552
Score = 86.3 bits (212), Expect = 2e-16
Identities = 47/162 (29%), Positives = 92/162 (56%), Gaps = 4/162 (2%)
Query: 475 KLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAK-RKSKKNIRK--QRMKILFNVVL 531
++++ ++ KK++ R D + + A G K N K ++M + + V+
Sbjct: 1336 EMEEEVRLKKRKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPKLTKQMNAIIDTVI 1395
Query: 532 EAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMK 591
++ SGR+L ++F+ PS+K+ P+YY++I +P+D K I+ IRN KY + +D+
Sbjct: 1396 NYKD-SSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVM 1454
Query: 592 LMFRNARHYNEEGSQVYNDAHILEKLLKEKRKELGPLPDDDD 633
L+ NA+ +N EGSQ+Y D+ +L+ + K R+++ + +D
Sbjct: 1455 LLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESED 1496
Score = 82.4 bits (202), Expect = 3e-15
Identities = 35/118 (29%), Positives = 74/118 (62%)
Query: 53 LYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLL 112
+ +T+ +YKD GR L E+FI+ P R+ P+YYE++ +P+D KI+++++ +Y + L
Sbjct: 1390 IIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDL 1449
Query: 113 TADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQ 170
D LL +NA+++ S Y+ + L ++ R + ++ E++DE ++E+ ++++
Sbjct: 1450 EKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEEDE 1507
Score = 54.3 bits (129), Expect = 9e-07
Identities = 38/169 (22%), Positives = 83/169 (49%), Gaps = 14/169 (8%)
Query: 772 PNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVD--PNFPN--KPPLTFDIIRK 827
PN L +++ + + +V++++D GR S+ ++P+ P + + P+ F I++
Sbjct: 1378 PNPPKLTKQM-NAIIDTVINYKDSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKE 1436
Query: 828 NVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEILL 887
+ N++YR L ++ + + A+ N S+IYED++ LQ F R ++ K E
Sbjct: 1437 RIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEE--- 1493
Query: 888 SPALSYTTKHLHNDVEKERKEKLPKEIEEDKLKREEEKREAEKSEDSSG 936
+ + + E+E +E+ E + K+K + K++ + + G
Sbjct: 1494 ------SEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDDKGRDKGKG 1536
Score = 32.7 bits (73), Expect = 2.9
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 1443 PAPGGSPYGQQVGVLGPPGQQAP-PPYPGPHPAGP-PVIQQPTTPMFVAPPPKTQRL 1497
PAPGG P PP P P P P P P PV+Q ++P K Q L
Sbjct: 281 PAPGGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGL 337
>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform A [Homo sapiens]
Length = 1679
Score = 99.0 bits (245), Expect = 3e-20
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 10/178 (5%)
Query: 602 EEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKL-------KLSRKSGISPKKSKY 654
EEG+ + + +K KRK S + K +K G P +
Sbjct: 1425 EEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLS 1484
Query: 655 MTP--MQQKLNEVYEAVKNYTDKR-GRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRS 711
P + +K+ ++ +AV Y D GR+LS +F++LPSR ELP+YY I+KP+D +KI+
Sbjct: 1485 PNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKE 1544
Query: 712 HMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDS 769
+ +KY+ ++ + +D +++ NA T+N SLIY+D++VL V R+ +E ++DS
Sbjct: 1545 RIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1602
Score = 92.0 bits (227), Expect = 4e-18
Identities = 58/220 (26%), Positives = 112/220 (50%), Gaps = 21/220 (9%)
Query: 159 DEDDDEDGQDNQGTVTE---GSSPAYLKEILEQLLEAIV-VATNPSGRLISELFQKLPSK 214
D+DD+ Q +G +P L + ++++++A++ + SGR +SE+F +LPS+
Sbjct: 1464 DKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSR 1523
Query: 215 VQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDAN 274
+ P+YY +I++P+D K I +RI+N Y+S++ + KD+ LL +NA+T+N GS +++D+
Sbjct: 1524 KELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSI 1583
Query: 275 SIKKIFYMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNK 334
++ +F + +IE + ++ G + GEE S+ K
Sbjct: 1584 VLQSVFTSVRQKIEKEDDSE-----------------GEESEEEEEGEEEGSESESRSVK 1626
Query: 335 RAVQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAE 374
++ GR L+ G + A + +SE E
Sbjct: 1627 VKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEE 1666
Score = 91.3 bits (225), Expect = 7e-18
Identities = 51/187 (27%), Positives = 102/187 (54%), Gaps = 15/187 (8%)
Query: 475 KLQQVMQAKKKELARRDDIEDGDSMISSATS--DTGSAKRKSKKNIRK------------ 520
++++ ++ KK R+ D + G S +++T D +K KK R
Sbjct: 1431 EIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNL 1490
Query: 521 -QRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDK 579
++MK + + V++ ++ SGR+L ++F+ PS+K+ P+YY++I +P+D K I+ IRN K
Sbjct: 1491 TKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHK 1550
Query: 580 YAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKL 639
Y + +D+ L+ +NA+ +N EGS +Y D+ +L+ + R+++ D + S +
Sbjct: 1551 YRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEE 1610
Query: 640 KLSRKSG 646
+ + G
Sbjct: 1611 EEGEEEG 1617
Score = 81.6 bits (200), Expect = 5e-15
Identities = 45/157 (28%), Positives = 87/157 (55%), Gaps = 3/157 (1%)
Query: 398 NNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFE 457
++ G+ ++E F LPS+K+ P+YY+ I+ P+ ++I+ +++N +Y +L+ LE D+ L+ +
Sbjct: 1507 SSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQ 1566
Query: 458 NAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKN 517
NA+ +N+ S IY+ + LQ V + ++++ + DD E +S + GS +S+
Sbjct: 1567 NAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGS---ESESR 1623
Query: 518 IRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKD 554
K ++K+ + R G RR KP D
Sbjct: 1624 SVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSD 1660
Score = 75.5 bits (184), Expect = 4e-13
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 7/171 (4%)
Query: 8 ATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQ-GR 66
+T +S+ S D DD G + N P + ++ + + YKD GR
Sbjct: 1454 STPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTK--KMKKIVDAVIKYKDSSSGR 1511
Query: 67 LLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSY 126
L E+FI+ P R+ P+YYE++ +P+D KI+++++ +Y +N L D LL NA+++
Sbjct: 1512 QLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTF 1571
Query: 127 YKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGS 177
S Y+ + L ++ R QK E +D+ + E+ ++ + EGS
Sbjct: 1572 NLEGSLIYEDSIVLQSVFTSVR----QKIEKEDDSEGEESEEEEEGEEEGS 1618
Score = 48.1 bits (113), Expect = 7e-05
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 772 PNVTLLIQELIHNLFVSVMSHQDDE-GRCYSDSLAEIPAVD--PNFPN--KPPLTFDIIR 826
PN+T +++++ +V+ ++D GR S+ ++P+ P + + P+ F I+
Sbjct: 1488 PNLTKKMKKIVD----AVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIK 1543
Query: 827 KNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEIL 886
+ + N++YR L+ ++ + + + A+ N S IYED++ LQ F +R ++ K +
Sbjct: 1544 ERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDD-- 1601
Query: 887 LSPALSYTTKHLHNDVEKERKEKLPKEIEEDKLKREEEKREAEKSED 933
E+E E+ E E +K + + EK++D
Sbjct: 1602 ---------SEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQD 1639
Score = 32.0 bits (71), Expect = 4.9
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 17/71 (23%)
Query: 1443 PAPGGSP--YGQQVGVLGP----PGQQ-APPPYPGPHPAGPP----------VIQQPTTP 1485
P PG +P Y + G+ GP PG PP PG P GPP +TP
Sbjct: 240 PGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTP 299
Query: 1486 MFVAPPPKTQR 1496
+ PP T R
Sbjct: 300 QKLIPPQPTGR 310
>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform E [Homo sapiens]
Length = 1614
Score = 99.0 bits (245), Expect = 3e-20
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 10/178 (5%)
Query: 602 EEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKL-------KLSRKSGISPKKSKY 654
EEG+ + + +K KRK S + K +K G P +
Sbjct: 1360 EEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLS 1419
Query: 655 MTP--MQQKLNEVYEAVKNYTDKR-GRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRS 711
P + +K+ ++ +AV Y D GR+LS +F++LPSR ELP+YY I+KP+D +KI+
Sbjct: 1420 PNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKE 1479
Query: 712 HMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDS 769
+ +KY+ ++ + +D +++ NA T+N SLIY+D++VL V R+ +E ++DS
Sbjct: 1480 RIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1537
Score = 92.0 bits (227), Expect = 4e-18
Identities = 58/220 (26%), Positives = 112/220 (50%), Gaps = 21/220 (9%)
Query: 159 DEDDDEDGQDNQGTVTE---GSSPAYLKEILEQLLEAIV-VATNPSGRLISELFQKLPSK 214
D+DD+ Q +G +P L + ++++++A++ + SGR +SE+F +LPS+
Sbjct: 1399 DKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSR 1458
Query: 215 VQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDAN 274
+ P+YY +I++P+D K I +RI+N Y+S++ + KD+ LL +NA+T+N GS +++D+
Sbjct: 1459 KELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSI 1518
Query: 275 SIKKIFYMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNK 334
++ +F + +IE + ++ G + GEE S+ K
Sbjct: 1519 VLQSVFTSVRQKIEKEDDSE-----------------GEESEEEEEGEEEGSESESRSVK 1561
Query: 335 RAVQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAE 374
++ GR L+ G + A + +SE E
Sbjct: 1562 VKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEE 1601
Score = 91.3 bits (225), Expect = 7e-18
Identities = 51/187 (27%), Positives = 102/187 (54%), Gaps = 15/187 (8%)
Query: 475 KLQQVMQAKKKELARRDDIEDGDSMISSATS--DTGSAKRKSKKNIRK------------ 520
++++ ++ KK R+ D + G S +++T D +K KK R
Sbjct: 1366 EIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNL 1425
Query: 521 -QRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDK 579
++MK + + V++ ++ SGR+L ++F+ PS+K+ P+YY++I +P+D K I+ IRN K
Sbjct: 1426 TKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHK 1485
Query: 580 YAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKL 639
Y + +D+ L+ +NA+ +N EGS +Y D+ +L+ + R+++ D + S +
Sbjct: 1486 YRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEE 1545
Query: 640 KLSRKSG 646
+ + G
Sbjct: 1546 EEGEEEG 1552
Score = 81.6 bits (200), Expect = 5e-15
Identities = 45/157 (28%), Positives = 87/157 (55%), Gaps = 3/157 (1%)
Query: 398 NNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFE 457
++ G+ ++E F LPS+K+ P+YY+ I+ P+ ++I+ +++N +Y +L+ LE D+ L+ +
Sbjct: 1442 SSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQ 1501
Query: 458 NAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKN 517
NA+ +N+ S IY+ + LQ V + ++++ + DD E +S + GS +S+
Sbjct: 1502 NAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGS---ESESR 1558
Query: 518 IRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKD 554
K ++K+ + R G RR KP D
Sbjct: 1559 SVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSD 1595
Score = 75.5 bits (184), Expect = 4e-13
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 7/171 (4%)
Query: 8 ATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQ-GR 66
+T +S+ S D DD G + N P + ++ + + YKD GR
Sbjct: 1389 STPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTK--KMKKIVDAVIKYKDSSSGR 1446
Query: 67 LLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSY 126
L E+FI+ P R+ P+YYE++ +P+D KI+++++ +Y +N L D LL NA+++
Sbjct: 1447 QLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTF 1506
Query: 127 YKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGS 177
S Y+ + L ++ R QK E +D+ + E+ ++ + EGS
Sbjct: 1507 NLEGSLIYEDSIVLQSVFTSVR----QKIEKEDDSEGEESEEEEEGEEEGS 1553
Score = 48.1 bits (113), Expect = 7e-05
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 772 PNVTLLIQELIHNLFVSVMSHQDDE-GRCYSDSLAEIPAVD--PNFPN--KPPLTFDIIR 826
PN+T +++++ +V+ ++D GR S+ ++P+ P + + P+ F I+
Sbjct: 1423 PNLTKKMKKIVD----AVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIK 1478
Query: 827 KNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEIL 886
+ + N++YR L+ ++ + + + A+ N S IYED++ LQ F +R ++ K +
Sbjct: 1479 ERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDD-- 1536
Query: 887 LSPALSYTTKHLHNDVEKERKEKLPKEIEEDKLKREEEKREAEKSED 933
E+E E+ E E +K + + EK++D
Sbjct: 1537 ---------SEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQD 1574
Score = 32.0 bits (71), Expect = 4.9
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 17/71 (23%)
Query: 1443 PAPGGSP--YGQQVGVLGP----PGQQ-APPPYPGPHPAGPP----------VIQQPTTP 1485
P PG +P Y + G+ GP PG PP PG P GPP +TP
Sbjct: 240 PGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTP 299
Query: 1486 MFVAPPPKTQR 1496
+ PP T R
Sbjct: 300 QKLIPPQPTGR 310
>gi|192807314 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform C [Homo sapiens]
Length = 1617
Score = 99.0 bits (245), Expect = 3e-20
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 10/178 (5%)
Query: 602 EEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKL-------KLSRKSGISPKKSKY 654
EEG+ + + +K KRK S + K +K G P +
Sbjct: 1363 EEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLS 1422
Query: 655 MTP--MQQKLNEVYEAVKNYTDKR-GRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRS 711
P + +K+ ++ +AV Y D GR+LS +F++LPSR ELP+YY I+KP+D +KI+
Sbjct: 1423 PNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKE 1482
Query: 712 HMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDS 769
+ +KY+ ++ + +D +++ NA T+N SLIY+D++VL V R+ +E ++DS
Sbjct: 1483 RIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1540
Score = 92.0 bits (227), Expect = 4e-18
Identities = 58/220 (26%), Positives = 112/220 (50%), Gaps = 21/220 (9%)
Query: 159 DEDDDEDGQDNQGTVTE---GSSPAYLKEILEQLLEAIV-VATNPSGRLISELFQKLPSK 214
D+DD+ Q +G +P L + ++++++A++ + SGR +SE+F +LPS+
Sbjct: 1402 DKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSR 1461
Query: 215 VQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDAN 274
+ P+YY +I++P+D K I +RI+N Y+S++ + KD+ LL +NA+T+N GS +++D+
Sbjct: 1462 KELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSI 1521
Query: 275 SIKKIFYMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNK 334
++ +F + +IE + ++ G + GEE S+ K
Sbjct: 1522 VLQSVFTSVRQKIEKEDDSE-----------------GEESEEEEEGEEEGSESESRSVK 1564
Query: 335 RAVQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAE 374
++ GR L+ G + A + +SE E
Sbjct: 1565 VKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEE 1604
Score = 91.3 bits (225), Expect = 7e-18
Identities = 51/187 (27%), Positives = 102/187 (54%), Gaps = 15/187 (8%)
Query: 475 KLQQVMQAKKKELARRDDIEDGDSMISSATS--DTGSAKRKSKKNIRK------------ 520
++++ ++ KK R+ D + G S +++T D +K KK R
Sbjct: 1369 EIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNL 1428
Query: 521 -QRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDK 579
++MK + + V++ ++ SGR+L ++F+ PS+K+ P+YY++I +P+D K I+ IRN K
Sbjct: 1429 TKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHK 1488
Query: 580 YAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKL 639
Y + +D+ L+ +NA+ +N EGS +Y D+ +L+ + R+++ D + S +
Sbjct: 1489 YRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEE 1548
Query: 640 KLSRKSG 646
+ + G
Sbjct: 1549 EEGEEEG 1555
Score = 81.6 bits (200), Expect = 5e-15
Identities = 45/157 (28%), Positives = 87/157 (55%), Gaps = 3/157 (1%)
Query: 398 NNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFE 457
++ G+ ++E F LPS+K+ P+YY+ I+ P+ ++I+ +++N +Y +L+ LE D+ L+ +
Sbjct: 1445 SSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQ 1504
Query: 458 NAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKN 517
NA+ +N+ S IY+ + LQ V + ++++ + DD E +S + GS +S+
Sbjct: 1505 NAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGS---ESESR 1561
Query: 518 IRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKD 554
K ++K+ + R G RR KP D
Sbjct: 1562 SVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSD 1598
Score = 75.5 bits (184), Expect = 4e-13
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 7/171 (4%)
Query: 8 ATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQ-GR 66
+T +S+ S D DD G + N P + ++ + + YKD GR
Sbjct: 1392 STPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTK--KMKKIVDAVIKYKDSSSGR 1449
Query: 67 LLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSY 126
L E+FI+ P R+ P+YYE++ +P+D KI+++++ +Y +N L D LL NA+++
Sbjct: 1450 QLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTF 1509
Query: 127 YKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGS 177
S Y+ + L ++ R QK E +D+ + E+ ++ + EGS
Sbjct: 1510 NLEGSLIYEDSIVLQSVFTSVR----QKIEKEDDSEGEESEEEEEGEEEGS 1556
Score = 48.1 bits (113), Expect = 7e-05
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 772 PNVTLLIQELIHNLFVSVMSHQDDE-GRCYSDSLAEIPAVD--PNFPN--KPPLTFDIIR 826
PN+T +++++ +V+ ++D GR S+ ++P+ P + + P+ F I+
Sbjct: 1426 PNLTKKMKKIVD----AVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIK 1481
Query: 827 KNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEIL 886
+ + N++YR L+ ++ + + + A+ N S IYED++ LQ F +R ++ K +
Sbjct: 1482 ERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDD-- 1539
Query: 887 LSPALSYTTKHLHNDVEKERKEKLPKEIEEDKLKREEEKREAEKSED 933
E+E E+ E E +K + + EK++D
Sbjct: 1540 ---------SEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQD 1577
Score = 32.0 bits (71), Expect = 4.9
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 17/71 (23%)
Query: 1443 PAPGGSP--YGQQVGVLGP----PGQQ-APPPYPGPHPAGPP----------VIQQPTTP 1485
P PG +P Y + G+ GP PG PP PG P GPP +TP
Sbjct: 240 PGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTP 299
Query: 1486 MFVAPPPKTQR 1496
+ PP T R
Sbjct: 300 QKLIPPQPTGR 310
>gi|192807312 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 99.0 bits (245), Expect = 3e-20
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 10/178 (5%)
Query: 602 EEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKL-------KLSRKSGISPKKSKY 654
EEG+ + + +K KRK S + K +K G P +
Sbjct: 1393 EEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLS 1452
Query: 655 MTP--MQQKLNEVYEAVKNYTDKR-GRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRS 711
P + +K+ ++ +AV Y D GR+LS +F++LPSR ELP+YY I+KP+D +KI+
Sbjct: 1453 PNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKE 1512
Query: 712 HMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDS 769
+ +KY+ ++ + +D +++ NA T+N SLIY+D++VL V R+ +E ++DS
Sbjct: 1513 RIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1570
Score = 92.0 bits (227), Expect = 4e-18
Identities = 58/220 (26%), Positives = 112/220 (50%), Gaps = 21/220 (9%)
Query: 159 DEDDDEDGQDNQGTVTE---GSSPAYLKEILEQLLEAIV-VATNPSGRLISELFQKLPSK 214
D+DD+ Q +G +P L + ++++++A++ + SGR +SE+F +LPS+
Sbjct: 1432 DKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSR 1491
Query: 215 VQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDAN 274
+ P+YY +I++P+D K I +RI+N Y+S++ + KD+ LL +NA+T+N GS +++D+
Sbjct: 1492 KELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSI 1551
Query: 275 SIKKIFYMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNK 334
++ +F + +IE + ++ G + GEE S+ K
Sbjct: 1552 VLQSVFTSVRQKIEKEDDSE-----------------GEESEEEEEGEEEGSESESRSVK 1594
Query: 335 RAVQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAE 374
++ GR L+ G + A + +SE E
Sbjct: 1595 VKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEE 1634
Score = 91.3 bits (225), Expect = 7e-18
Identities = 51/187 (27%), Positives = 102/187 (54%), Gaps = 15/187 (8%)
Query: 475 KLQQVMQAKKKELARRDDIEDGDSMISSATS--DTGSAKRKSKKNIRK------------ 520
++++ ++ KK R+ D + G S +++T D +K KK R
Sbjct: 1399 EIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNL 1458
Query: 521 -QRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDK 579
++MK + + V++ ++ SGR+L ++F+ PS+K+ P+YY++I +P+D K I+ IRN K
Sbjct: 1459 TKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHK 1518
Query: 580 YAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKL 639
Y + +D+ L+ +NA+ +N EGS +Y D+ +L+ + R+++ D + S +
Sbjct: 1519 YRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEE 1578
Query: 640 KLSRKSG 646
+ + G
Sbjct: 1579 EEGEEEG 1585
Score = 81.6 bits (200), Expect = 5e-15
Identities = 45/157 (28%), Positives = 87/157 (55%), Gaps = 3/157 (1%)
Query: 398 NNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFE 457
++ G+ ++E F LPS+K+ P+YY+ I+ P+ ++I+ +++N +Y +L+ LE D+ L+ +
Sbjct: 1475 SSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQ 1534
Query: 458 NAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKN 517
NA+ +N+ S IY+ + LQ V + ++++ + DD E +S + GS +S+
Sbjct: 1535 NAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGS---ESESR 1591
Query: 518 IRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKD 554
K ++K+ + R G RR KP D
Sbjct: 1592 SVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSD 1628
Score = 75.5 bits (184), Expect = 4e-13
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 7/171 (4%)
Query: 8 ATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQ-GR 66
+T +S+ S D DD G + N P + ++ + + YKD GR
Sbjct: 1422 STPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTK--KMKKIVDAVIKYKDSSSGR 1479
Query: 67 LLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSY 126
L E+FI+ P R+ P+YYE++ +P+D KI+++++ +Y +N L D LL NA+++
Sbjct: 1480 QLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTF 1539
Query: 127 YKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGS 177
S Y+ + L ++ R QK E +D+ + E+ ++ + EGS
Sbjct: 1540 NLEGSLIYEDSIVLQSVFTSVR----QKIEKEDDSEGEESEEEEEGEEEGS 1586
Score = 48.1 bits (113), Expect = 7e-05
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 772 PNVTLLIQELIHNLFVSVMSHQDDE-GRCYSDSLAEIPAVD--PNFPN--KPPLTFDIIR 826
PN+T +++++ +V+ ++D GR S+ ++P+ P + + P+ F I+
Sbjct: 1456 PNLTKKMKKIVD----AVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIK 1511
Query: 827 KNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEIL 886
+ + N++YR L+ ++ + + + A+ N S IYED++ LQ F +R ++ K +
Sbjct: 1512 ERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDD-- 1569
Query: 887 LSPALSYTTKHLHNDVEKERKEKLPKEIEEDKLKREEEKREAEKSED 933
E+E E+ E E +K + + EK++D
Sbjct: 1570 ---------SEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQD 1607
Score = 32.0 bits (71), Expect = 4.9
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 17/71 (23%)
Query: 1443 PAPGGSP--YGQQVGVLGP----PGQQ-APPPYPGPHPAGPP----------VIQQPTTP 1485
P PG +P Y + G+ GP PG PP PG P GPP +TP
Sbjct: 240 PGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTP 299
Query: 1486 MFVAPPPKTQR 1496
+ PP T R
Sbjct: 300 QKLIPPQPTGR 310
>gi|21071056 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a4 isoform B [Homo sapiens]
Length = 1647
Score = 99.0 bits (245), Expect = 3e-20
Identities = 57/178 (32%), Positives = 97/178 (54%), Gaps = 10/178 (5%)
Query: 602 EEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKL-------KLSRKSGISPKKSKY 654
EEG+ + + +K KRK S + K +K G P +
Sbjct: 1393 EEGTLEEIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLS 1452
Query: 655 MTP--MQQKLNEVYEAVKNYTDKR-GRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRS 711
P + +K+ ++ +AV Y D GR+LS +F++LPSR ELP+YY I+KP+D +KI+
Sbjct: 1453 PNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKE 1512
Query: 712 HMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDS 769
+ +KY+ ++ + +D +++ NA T+N SLIY+D++VL V R+ +E ++DS
Sbjct: 1513 RIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDS 1570
Score = 92.0 bits (227), Expect = 4e-18
Identities = 58/220 (26%), Positives = 112/220 (50%), Gaps = 21/220 (9%)
Query: 159 DEDDDEDGQDNQGTVTE---GSSPAYLKEILEQLLEAIV-VATNPSGRLISELFQKLPSK 214
D+DD+ Q +G +P L + ++++++A++ + SGR +SE+F +LPS+
Sbjct: 1432 DKDDESKKQKKRGRPPAEKLSPNPPNLTKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSR 1491
Query: 215 VQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDAN 274
+ P+YY +I++P+D K I +RI+N Y+S++ + KD+ LL +NA+T+N GS +++D+
Sbjct: 1492 KELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSI 1551
Query: 275 SIKKIFYMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNK 334
++ +F + +IE + ++ G + GEE S+ K
Sbjct: 1552 VLQSVFTSVRQKIEKEDDSE-----------------GEESEEEEEGEEEGSESESRSVK 1594
Query: 335 RAVQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAE 374
++ GR L+ G + A + +SE E
Sbjct: 1595 VKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSDDDSEEE 1634
Score = 91.3 bits (225), Expect = 7e-18
Identities = 51/187 (27%), Positives = 102/187 (54%), Gaps = 15/187 (8%)
Query: 475 KLQQVMQAKKKELARRDDIEDGDSMISSATS--DTGSAKRKSKKNIRK------------ 520
++++ ++ KK R+ D + G S +++T D +K KK R
Sbjct: 1399 EIEEEVRQKKSSRKRKRDSDAGSSTPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNL 1458
Query: 521 -QRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDK 579
++MK + + V++ ++ SGR+L ++F+ PS+K+ P+YY++I +P+D K I+ IRN K
Sbjct: 1459 TKKMKKIVDAVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHK 1518
Query: 580 YAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKL 639
Y + +D+ L+ +NA+ +N EGS +Y D+ +L+ + R+++ D + S +
Sbjct: 1519 YRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEE 1578
Query: 640 KLSRKSG 646
+ + G
Sbjct: 1579 EEGEEEG 1585
Score = 81.6 bits (200), Expect = 5e-15
Identities = 45/157 (28%), Positives = 87/157 (55%), Gaps = 3/157 (1%)
Query: 398 NNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFE 457
++ G+ ++E F LPS+K+ P+YY+ I+ P+ ++I+ +++N +Y +L+ LE D+ L+ +
Sbjct: 1475 SSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQ 1534
Query: 458 NAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKN 517
NA+ +N+ S IY+ + LQ V + ++++ + DD E +S + GS +S+
Sbjct: 1535 NAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDDSEGEESEEEEEGEEEGS---ESESR 1591
Query: 518 IRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKD 554
K ++K+ + R G RR KP D
Sbjct: 1592 SVKVKIKLGRKEKAQDRLKGGRRRPSRGSRAKPVVSD 1628
Score = 75.5 bits (184), Expect = 4e-13
Identities = 48/171 (28%), Positives = 86/171 (50%), Gaps = 7/171 (4%)
Query: 8 ATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQ-GR 66
+T +S+ S D DD G + N P + ++ + + YKD GR
Sbjct: 1422 STPTTSTRSRDKDDESKKQKKRGRPPAEKLSPNPPNLTK--KMKKIVDAVIKYKDSSSGR 1479
Query: 67 LLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSY 126
L E+FI+ P R+ P+YYE++ +P+D KI+++++ +Y +N L D LL NA+++
Sbjct: 1480 QLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLNDLEKDVMLLCQNAQTF 1539
Query: 127 YKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQGTVTEGS 177
S Y+ + L ++ R QK E +D+ + E+ ++ + EGS
Sbjct: 1540 NLEGSLIYEDSIVLQSVFTSVR----QKIEKEDDSEGEESEEEEEGEEEGS 1586
Score = 48.1 bits (113), Expect = 7e-05
Identities = 38/167 (22%), Positives = 80/167 (47%), Gaps = 20/167 (11%)
Query: 772 PNVTLLIQELIHNLFVSVMSHQDDE-GRCYSDSLAEIPAVD--PNFPN--KPPLTFDIIR 826
PN+T +++++ +V+ ++D GR S+ ++P+ P + + P+ F I+
Sbjct: 1456 PNLTKKMKKIVD----AVIKYKDSSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIK 1511
Query: 827 KNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIRDELCKNGEIL 886
+ + N++YR L+ ++ + + + A+ N S IYED++ LQ F +R ++ K +
Sbjct: 1512 ERIRNHKYRSLNDLEKDVMLLCQNAQTFNLEGSLIYEDSIVLQSVFTSVRQKIEKEDD-- 1569
Query: 887 LSPALSYTTKHLHNDVEKERKEKLPKEIEEDKLKREEEKREAEKSED 933
E+E E+ E E +K + + EK++D
Sbjct: 1570 ---------SEGEESEEEEEGEEEGSESESRSVKVKIKLGRKEKAQD 1607
Score = 32.0 bits (71), Expect = 4.9
Identities = 24/71 (33%), Positives = 29/71 (40%), Gaps = 17/71 (23%)
Query: 1443 PAPGGSP--YGQQVGVLGP----PGQQ-APPPYPGPHPAGPP----------VIQQPTTP 1485
P PG +P Y + G+ GP PG PP PG P GPP +TP
Sbjct: 240 PGPGPAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGPPKPWPEGPMANAAAPTSTP 299
Query: 1486 MFVAPPPKTQR 1496
+ PP T R
Sbjct: 300 QKLIPPQPTGR 310
>gi|46399200 testis-specific bromodomain protein [Homo sapiens]
Length = 947
Score = 93.6 bits (231), Expect = 1e-18
Identities = 77/311 (24%), Positives = 130/311 (41%), Gaps = 43/311 (13%)
Query: 214 KVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDA 273
K+Q PDYY IIK P+DL TI +R++N Y +D + + N YN+PG + A
Sbjct: 60 KLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 274 NSIKKIFYMKKAEIEHHEM---AKSSLRMRTPSNLA---AARLTGPSHSKGSLGEERNPT 327
+++K+F K +++ E K ++ T N+A A + PS ++ ++ P+
Sbjct: 120 QALEKLFMQKLSQMPQEEQVVGVKERIKKGTQQNIAVSSAKEKSSPSATEKVFKQQEIPS 179
Query: 328 ---SKYYRNKRAVQGGRLSAITMA---LQYGSESEEDAALAAARYEEGESEAESITSFMD 381
VQG +++ + + G + + D A + SE +
Sbjct: 180 VFPKTSISPLNVVQGASVNSSSQTAAQVTKGVKRKADTTTPATSAVKASSEFSPTFTEKS 239
Query: 382 VSNP-------------FYQLYDTV---------RSCRNNQGQLIAE-------PFYHLP 412
V+ P Q Y+ V R C +++A+ PFY+
Sbjct: 240 VALPPIKENMPKNVLPDSQQQYNVVKTVKVTEQLRHCSEILKEMLAKKHFSYAWPFYNPV 299
Query: 413 SKKK--YPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIY 470
+YY +K P+ L I+ K+ NQEY+ D+ LMF N +YN P+ +
Sbjct: 300 DVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVV 359
Query: 471 KRVLKLQQVMQ 481
LQ V +
Sbjct: 360 TMARMLQDVFE 370
Score = 62.0 bits (149), Expect = 4e-09
Identities = 75/349 (21%), Positives = 129/349 (36%), Gaps = 47/349 (13%)
Query: 414 KKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRV 473
K + PDYY IK P+ L I+ +L+N+ Y D N MF N YN P I
Sbjct: 60 KLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 474 LKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEA 533
L+++ K ++ + + + I K+ +++NI V A
Sbjct: 120 QALEKLFMQKLSQMPQEEQVVGVKERI----------KKGTQQNI----------AVSSA 159
Query: 534 REPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLM 593
+E S +F + +P K + P L +++ N + + +K
Sbjct: 160 KEKSSPSATEKVFKQQEIPSVFP---KTSISP--LNVVQGASVNSSSQTAAQVTKGVK-- 212
Query: 594 FRNARHYNEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKLKLSRKSGISPKKSK 653
R A S V + E P + +A P +K + + P +
Sbjct: 213 -RKADTTTPATSAV------------KASSEFSPTFTEKSVALPPIKENMPKNVLPDSQQ 259
Query: 654 YMTPMQ-----QKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELP--DYYLTIKKPMDM 706
++ ++L E +K K+ + F + L +YY +K PMD+
Sbjct: 260 QYNVVKTVKVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDL 319
Query: 707 EKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKV 755
I+ M +Y+D D +MF N YN P+ + A +L V
Sbjct: 320 GTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDV 368
Score = 53.1 bits (126), Expect = 2e-06
Identities = 26/76 (34%), Positives = 38/76 (50%)
Query: 692 ELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALV 751
+LPDYY IK PMD+ I+ + Y +EDF MF+N YN+P I A
Sbjct: 62 QLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQA 121
Query: 752 LHKVLLETRRDLEGDE 767
L K+ ++ + +E
Sbjct: 122 LEKLFMQKLSQMPQEE 137
Score = 51.2 bits (121), Expect = 8e-06
Identities = 67/330 (20%), Positives = 133/330 (40%), Gaps = 36/330 (10%)
Query: 219 DYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKK 278
+YY ++K P+DL TI +++ N YK + A D+ L+ N YN P +V A ++
Sbjct: 308 NYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQD 367
Query: 279 IF--YMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNKR- 335
+F + K IE E + T + S+G+ ++ S+ R KR
Sbjct: 368 VFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASSEGNSSDD----SEDERVKRL 423
Query: 336 AVQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMDVSNPFYQLYDTVRS 395
A +L A+ LQ S+ + E + E + + + +
Sbjct: 424 AKLQEQLKAVHQQLQVLSQVPFRKLNKKKEKSKKEKKKEKVNNSNENPRKMCEQMRLKEK 483
Query: 396 CRNNQGQLIAEPFYHLPSK----KKYPDYYQQIKMPISLQQ------------IRTKLKN 439
+ NQ + + F L S+ K +Y ++ ++ +++ + I+++ +
Sbjct: 484 SKRNQPKKRKQQFIGLKSEDEDNAKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPS 543
Query: 440 QEYETLDHLECDLNLMFENAKR--YNVPNSAIYKRVLK---------LQQVMQAKKKELA 488
D +E D + + R ++ + KR LK +++ KK+EL
Sbjct: 544 LSNSNPDEIEIDFETLKASTLRELEKYVSACLRKRPLKPPAKKIMMSKEELHSQKKQELE 603
Query: 489 RRDDIEDGDSMISSATSDTGSAKRKSKKNI 518
+R + D ++ ++S T S K + K +
Sbjct: 604 KR--LLDVNNQLNSRKRQTKSDKTQPSKAV 631
Score = 47.4 bits (111), Expect = 1e-04
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 83 DYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWD 142
+YY+VV P+DL I++K+ +EY D AD +L+F N Y PD A L D
Sbjct: 308 NYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQD 367
Query: 143 LY 144
++
Sbjct: 368 VF 369
Score = 44.3 bits (103), Expect = 0.001
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 82 PDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLW 141
PDYY ++ P+DL I+++L+ + Y + DF +F+N Y KP A L
Sbjct: 64 PDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALE 123
Query: 142 DLYLRTRNEFVQKGE--ADDEDDDEDGQDN--QGTVTEGSSPAYLKEILEQ 188
L+++ ++ Q+ + E + Q N + E SSP+ +++ +Q
Sbjct: 124 KLFMQKLSQMPQEEQVVGVKERIKKGTQQNIAVSSAKEKSSPSATEKVFKQ 174
Score = 43.5 bits (101), Expect = 0.002
Identities = 37/186 (19%), Positives = 74/186 (39%), Gaps = 3/186 (1%)
Query: 557 DYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEK 616
+YY ++ PMDL I+ + N +Y D++LMF N YN +V A +L+
Sbjct: 308 NYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQD 367
Query: 617 LLKEKRKELGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKR 676
+ + ++ P+ + M +K + + + ++ + K
Sbjct: 368 VFETHFSKI-PIEPVESMPLCYIKTDITETTGRENTNEASSEGNSSDDSEDERVKRLAKL 426
Query: 677 GRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNAC 736
+L A+ +L S++P L KK ++ + + N ++ M E M
Sbjct: 427 QEQLKAVHQQLQVLSQVPFRKLNKKKEKSKKEKKKEKVNNSNENPRKMCEQ--MRLKEKS 484
Query: 737 TYNEPE 742
N+P+
Sbjct: 485 KRNQPK 490
>gi|46399198 testis-specific bromodomain protein [Homo sapiens]
Length = 947
Score = 93.6 bits (231), Expect = 1e-18
Identities = 77/311 (24%), Positives = 130/311 (41%), Gaps = 43/311 (13%)
Query: 214 KVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDA 273
K+Q PDYY IIK P+DL TI +R++N Y +D + + N YN+PG + A
Sbjct: 60 KLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 274 NSIKKIFYMKKAEIEHHEM---AKSSLRMRTPSNLA---AARLTGPSHSKGSLGEERNPT 327
+++K+F K +++ E K ++ T N+A A + PS ++ ++ P+
Sbjct: 120 QALEKLFMQKLSQMPQEEQVVGVKERIKKGTQQNIAVSSAKEKSSPSATEKVFKQQEIPS 179
Query: 328 ---SKYYRNKRAVQGGRLSAITMA---LQYGSESEEDAALAAARYEEGESEAESITSFMD 381
VQG +++ + + G + + D A + SE +
Sbjct: 180 VFPKTSISPLNVVQGASVNSSSQTAAQVTKGVKRKADTTTPATSAVKASSEFSPTFTEKS 239
Query: 382 VSNP-------------FYQLYDTV---------RSCRNNQGQLIAE-------PFYHLP 412
V+ P Q Y+ V R C +++A+ PFY+
Sbjct: 240 VALPPIKENMPKNVLPDSQQQYNVVKTVKVTEQLRHCSEILKEMLAKKHFSYAWPFYNPV 299
Query: 413 SKKK--YPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIY 470
+YY +K P+ L I+ K+ NQEY+ D+ LMF N +YN P+ +
Sbjct: 300 DVNALGLHNYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVV 359
Query: 471 KRVLKLQQVMQ 481
LQ V +
Sbjct: 360 TMARMLQDVFE 370
Score = 62.0 bits (149), Expect = 4e-09
Identities = 75/349 (21%), Positives = 129/349 (36%), Gaps = 47/349 (13%)
Query: 414 KKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRV 473
K + PDYY IK P+ L I+ +L+N+ Y D N MF N YN P I
Sbjct: 60 KLQLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMA 119
Query: 474 LKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEA 533
L+++ K ++ + + + I K+ +++NI V A
Sbjct: 120 QALEKLFMQKLSQMPQEEQVVGVKERI----------KKGTQQNI----------AVSSA 159
Query: 534 REPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLM 593
+E S +F + +P K + P L +++ N + + +K
Sbjct: 160 KEKSSPSATEKVFKQQEIPSVFP---KTSISP--LNVVQGASVNSSSQTAAQVTKGVK-- 212
Query: 594 FRNARHYNEEGSQVYNDAHILEKLLKEKRKELGPLPDDDDMASPKLKLSRKSGISPKKSK 653
R A S V + E P + +A P +K + + P +
Sbjct: 213 -RKADTTTPATSAV------------KASSEFSPTFTEKSVALPPIKENMPKNVLPDSQQ 259
Query: 654 YMTPMQ-----QKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELP--DYYLTIKKPMDM 706
++ ++L E +K K+ + F + L +YY +K PMD+
Sbjct: 260 QYNVVKTVKVTEQLRHCSEILKEMLAKKHFSYAWPFYNPVDVNALGLHNYYDVVKNPMDL 319
Query: 707 EKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKV 755
I+ M +Y+D D +MF N YN P+ + A +L V
Sbjct: 320 GTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQDV 368
Score = 53.1 bits (126), Expect = 2e-06
Identities = 26/76 (34%), Positives = 38/76 (50%)
Query: 692 ELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALV 751
+LPDYY IK PMD+ I+ + Y +EDF MF+N YN+P I A
Sbjct: 62 QLPDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQA 121
Query: 752 LHKVLLETRRDLEGDE 767
L K+ ++ + +E
Sbjct: 122 LEKLFMQKLSQMPQEE 137
Score = 51.2 bits (121), Expect = 8e-06
Identities = 67/330 (20%), Positives = 133/330 (40%), Gaps = 36/330 (10%)
Query: 219 DYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKK 278
+YY ++K P+DL TI +++ N YK + A D+ L+ N YN P +V A ++
Sbjct: 308 NYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQD 367
Query: 279 IF--YMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNKR- 335
+F + K IE E + T + S+G+ ++ S+ R KR
Sbjct: 368 VFETHFSKIPIEPVESMPLCYIKTDITETTGRENTNEASSEGNSSDD----SEDERVKRL 423
Query: 336 AVQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMDVSNPFYQLYDTVRS 395
A +L A+ LQ S+ + E + E + + + +
Sbjct: 424 AKLQEQLKAVHQQLQVLSQVPFRKLNKKKEKSKKEKKKEKVNNSNENPRKMCEQMRLKEK 483
Query: 396 CRNNQGQLIAEPFYHLPSK----KKYPDYYQQIKMPISLQQ------------IRTKLKN 439
+ NQ + + F L S+ K +Y ++ ++ +++ + I+++ +
Sbjct: 484 SKRNQPKKRKQQFIGLKSEDEDNAKPMNYDEKRQLSLNINKLPGDKLGRVVHIIQSREPS 543
Query: 440 QEYETLDHLECDLNLMFENAKR--YNVPNSAIYKRVLK---------LQQVMQAKKKELA 488
D +E D + + R ++ + KR LK +++ KK+EL
Sbjct: 544 LSNSNPDEIEIDFETLKASTLRELEKYVSACLRKRPLKPPAKKIMMSKEELHSQKKQELE 603
Query: 489 RRDDIEDGDSMISSATSDTGSAKRKSKKNI 518
+R + D ++ ++S T S K + K +
Sbjct: 604 KR--LLDVNNQLNSRKRQTKSDKTQPSKAV 631
Score = 47.4 bits (111), Expect = 1e-04
Identities = 23/62 (37%), Positives = 34/62 (54%)
Query: 83 DYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWD 142
+YY+VV P+DL I++K+ +EY D AD +L+F N Y PD A L D
Sbjct: 308 NYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQD 367
Query: 143 LY 144
++
Sbjct: 368 VF 369
Score = 44.3 bits (103), Expect = 0.001
Identities = 29/111 (26%), Positives = 54/111 (48%), Gaps = 4/111 (3%)
Query: 82 PDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLW 141
PDYY ++ P+DL I+++L+ + Y + DF +F+N Y KP A L
Sbjct: 64 PDYYTIIKNPMDLNTIKKRLENKYYAKASECIEDFNTMFSNCYLYNKPGDDIVLMAQALE 123
Query: 142 DLYLRTRNEFVQKGE--ADDEDDDEDGQDN--QGTVTEGSSPAYLKEILEQ 188
L+++ ++ Q+ + E + Q N + E SSP+ +++ +Q
Sbjct: 124 KLFMQKLSQMPQEEQVVGVKERIKKGTQQNIAVSSAKEKSSPSATEKVFKQ 174
Score = 43.5 bits (101), Expect = 0.002
Identities = 37/186 (19%), Positives = 74/186 (39%), Gaps = 3/186 (1%)
Query: 557 DYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEK 616
+YY ++ PMDL I+ + N +Y D++LMF N YN +V A +L+
Sbjct: 308 NYYDVVKNPMDLGTIKEKMDNQEYKDAYKFAADVRLMFMNCYKYNPPDHEVVTMARMLQD 367
Query: 617 LLKEKRKELGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDKR 676
+ + ++ P+ + M +K + + + ++ + K
Sbjct: 368 VFETHFSKI-PIEPVESMPLCYIKTDITETTGRENTNEASSEGNSSDDSEDERVKRLAKL 426
Query: 677 GRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNAC 736
+L A+ +L S++P L KK ++ + + N ++ M E M
Sbjct: 427 QEQLKAVHQQLQVLSQVPFRKLNKKKEKSKKEKKKEKVNNSNENPRKMCEQ--MRLKEKS 484
Query: 737 TYNEPE 742
N+P+
Sbjct: 485 KRNQPK 490
>gi|48255900 SWI/SNF-related matrix-associated actin-dependent
regulator of chromatin a2 isoform a [Homo sapiens]
Length = 1590
Score = 89.7 bits (221), Expect = 2e-17
Identities = 50/171 (29%), Positives = 93/171 (54%), Gaps = 24/171 (14%)
Query: 619 KEKRKELGPLPDDDDMASPKLKLSRKSG--ISPKKSKYMTPMQQKLNEVYEAVKNYTDK- 675
+++R+ + P +D+ K + R +SP K + +++N + + V NY D+
Sbjct: 1346 RKRRRNVDKDPAKEDVEKAKKRRGRPPAEKLSPNPPK----LTKQMNAIIDTVINYKDRC 1401
Query: 676 -----------------RGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKY 718
GR+LS +F++LPSR ELP+YY I+KP+D +KI+ + +KY
Sbjct: 1402 NVEKVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKY 1461
Query: 719 QDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDS 769
+ + + +D +++ +NA T+N S IY+D++VL V R+ + +E+S
Sbjct: 1462 RSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEES 1512
Score = 86.3 bits (212), Expect = 2e-16
Identities = 44/159 (27%), Positives = 91/159 (57%), Gaps = 6/159 (3%)
Query: 398 NNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFE 457
N+ G+ ++E F LPS+K+ P+YY+ I+ P+ ++I+ +++N +Y +L LE D+ L+
Sbjct: 1417 NSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCH 1476
Query: 458 NAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKN 517
NA+ +N+ S IY+ + LQ V ++ ++++A+ ++ ED S + + +S+
Sbjct: 1477 NAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESED-----ESNEEEEEEDEEESESE 1531
Query: 518 IRKQRMKILFNVVLE-AREPGSGRRLCDLFMVKPSKKDY 555
+ ++KI N + R+ G G++ + KP D+
Sbjct: 1532 AKSVKVKIKLNKKDDKGRDKGKGKKRPNRGKAKPVVSDF 1570
Score = 86.3 bits (212), Expect = 2e-16
Identities = 38/94 (40%), Positives = 65/94 (69%)
Query: 198 NPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAK 257
N SGR +SE+F +LPS+ + P+YY +I++P+D K I +RI+N Y+S+ + KD+ LL
Sbjct: 1417 NSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCH 1476
Query: 258 NAKTYNEPGSQVFKDANSIKKIFYMKKAEIEHHE 291
NA+T+N GSQ+++D+ ++ +F + +I E
Sbjct: 1477 NAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEE 1510
Score = 85.1 bits (209), Expect = 5e-16
Identities = 40/110 (36%), Positives = 69/110 (62%)
Query: 524 KILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGE 583
K+ N LE SGR+L ++F+ PS+K+ P+YY++I +P+D K I+ IRN KY
Sbjct: 1405 KVPSNSQLEIEGNSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSL 1464
Query: 584 EGMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKELGPLPDDDD 633
+ +D+ L+ NA+ +N EGSQ+Y D+ +L+ + K R+++ + +D
Sbjct: 1465 GDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESED 1514
Score = 72.8 bits (177), Expect = 2e-12
Identities = 31/109 (28%), Positives = 67/109 (61%)
Query: 62 DEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFN 121
+ GR L E+FI+ P R+ P+YYE++ +P+D KI+++++ +Y + L D LL +
Sbjct: 1417 NSSGRQLSEVFIQLPSRKELPEYYELIRKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCH 1476
Query: 122 NAKSYYKPDSPEYKAACKLWDLYLRTRNEFVQKGEADDEDDDEDGQDNQ 170
NA+++ S Y+ + L ++ R + ++ E++DE ++E+ ++++
Sbjct: 1477 NAQTFNLEGSQIYEDSIVLQSVFKSARQKIAKEEESEDESNEEEEEEDE 1525
Score = 47.8 bits (112), Expect = 9e-05
Identities = 28/120 (23%), Positives = 58/120 (48%), Gaps = 9/120 (7%)
Query: 817 KPPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIKIR 876
+ P+ F I++ + N++YR L ++ + + A+ N S+IYED++ LQ F R
Sbjct: 1444 RKPVDFKKIKERIRNHKYRSLGDLEKDVMLLCHNAQTFNLEGSQIYEDSIVLQSVFKSAR 1503
Query: 877 DELCKNGEILLSPALSYTTKHLHNDVEKERKEKLPKEIEEDKLKREEEKREAEKSEDSSG 936
++ K E + + + E+E +E+ E + K+K + K++ + + G
Sbjct: 1504 QKIAKEEE---------SEDESNEEEEEEDEEESESEAKSVKVKIKLNKKDDKGRDKGKG 1554
Score = 32.7 bits (73), Expect = 2.9
Identities = 21/57 (36%), Positives = 24/57 (42%), Gaps = 2/57 (3%)
Query: 1443 PAPGGSPYGQQVGVLGPPGQQAP-PPYPGPHPAGP-PVIQQPTTPMFVAPPPKTQRL 1497
PAPGG P PP P P P P P P PV+Q ++P K Q L
Sbjct: 281 PAPGGRPSPAPPAAAQPPAAAVPGPSVPQPAPGQPSPVLQLQQKQSRISPIQKPQGL 337
>gi|110349788 absent, small, or homeotic 1-like [Homo sapiens]
Length = 2964
Score = 85.5 bits (210), Expect = 4e-16
Identities = 67/262 (25%), Positives = 110/262 (41%), Gaps = 33/262 (12%)
Query: 1142 EPGCHYFEQLHYNDMWLKVGDCVFIKSHGLVRPR--------------------VGRIEK 1181
+PGC YF L +D+ L+ GDCV++ P + RIEK
Sbjct: 2642 QPGCVYFICLLRDDLLLRQGDCVYLMRDSRRTPDGHPVRQSYRLLSHINRDKLDIFRIEK 2701
Query: 1182 VWVRDGAAYF-YGPIFIHPEETEHEPTKMFYKKEVFLSNLEETCPMTCILGKCAVLSFKD 1240
+W + F +G + P ET H P++ FY E+F L E P+ ++G C VL
Sbjct: 2702 LWKNEKEERFAFGHHYFRPHETHHSPSRRFYHNELFRVPLYEIIPLEAVVGTCCVLDLYT 2761
Query: 1241 FLSCRPTEIPENDILLCESRYNESDKQMKKFKGLKRFSLSAKVVDDEIYYFRKPIVPQKE 1300
+ RP + E D+ +C+ R DK F + R +F K + P+K+
Sbjct: 2762 YCKGRPKGVKEQDVYICDYRL---DKSAHLFYKIHRNRYPVCTKPYAFDHFPKKLTPKKD 2818
Query: 1301 PSP--LLEKKIQLLEAKFAELEGGDDDIEEMGEEDSEVIEPPSLPQLQTPLASELDLMPY 1358
SP + + + + E ++++G+ED +LP ++ LAS+
Sbjct: 2819 FSPHYVPDNYKRNGGRSSWKSERSKPPLKDLGQEDD------ALPLIEEVLASQEQAANE 2872
Query: 1359 TPPQSTPKSAKGSAK-KEGSKR 1379
P P+ +A EG K+
Sbjct: 2873 IPSLEEPEREGATANVSEGEKK 2894
Score = 73.6 bits (179), Expect = 1e-12
Identities = 31/101 (30%), Positives = 58/101 (57%)
Query: 980 IERLWEDSAGEKWLYGCWFYRPNETFHLATRKFLEKEVFKSDYYNKVPVSKILGKCVVMF 1039
IE+LW++ E++ +G ++RP+ET H +R+F E+F+ Y +P+ ++G C V+
Sbjct: 2699 IEKLWKNEKEERFAFGHHYFRPHETHHSPSRRFYHNELFRVPLYEIIPLEAVVGTCCVLD 2758
Query: 1040 VKEYFKLCPENFRDEDVFVCESRYSAKTKSFKKIKLWTMPI 1080
+ Y K P+ +++DV++C+ R F KI P+
Sbjct: 2759 LYTYCKGRPKGVKEQDVYICDYRLDKSAHLFYKIHRNRYPV 2799
Score = 64.7 bits (156), Expect = 7e-10
Identities = 32/99 (32%), Positives = 50/99 (50%)
Query: 52 ELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNL 111
E+ + I YKD + L + P ++ DYYE +S P+DL+ I++++ Y V
Sbjct: 2446 EICDGIISYKDSSRQALAAPLLNLPPKKKNADYYEKISDPLDLITIEKQILTGYYKTVEA 2505
Query: 112 LTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYLRTRNE 150
AD +F NA+ YY SP + C+L Y R+E
Sbjct: 2506 FDADMLKVFRNAEKYYGRKSPVGRDVCRLRKAYYNARHE 2544
Score = 63.9 bits (154), Expect = 1e-09
Identities = 33/129 (25%), Positives = 72/129 (55%)
Query: 386 FYQLYDTVRSCRNNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETL 445
F ++ D + S +++ Q +A P +LP KKK DYY++I P+ L I ++ Y+T+
Sbjct: 2444 FKEICDGIISYKDSSRQALAAPLLNLPPKKKNADYYEKISDPLDLITIEKQILTGYYKTV 2503
Query: 446 DHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATS 505
+ + D+ +F NA++Y S + + V +L++ + E + + D G++ + +S
Sbjct: 2504 EAFDADMLKVFRNAEKYYGRKSPVGRDVCRLRKAYYNARHEASAQIDEIVGETASEADSS 2563
Query: 506 DTGSAKRKS 514
+T +++++
Sbjct: 2564 ETSVSEKEN 2572
Score = 58.5 bits (140), Expect = 5e-08
Identities = 33/112 (29%), Positives = 60/112 (53%)
Query: 175 EGSSPAYLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIA 234
E + A L +I +++ + I+ + S + ++ LP K + DYY I +P+DL TI
Sbjct: 2433 EVARAARLAQIFKEICDGIISYKDSSRQALAAPLLNLPPKKKNADYYEKISDPLDLITIE 2492
Query: 235 QRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAE 286
++I G YK++ A D+ + +NA+ Y S V +D ++K +Y + E
Sbjct: 2493 KQILTGYYKTVEAFDADMLKVFRNAEKYYGRKSPVGRDVCRLRKAYYNARHE 2544
Score = 53.9 bits (128), Expect = 1e-06
Identities = 29/114 (25%), Positives = 52/114 (45%)
Query: 658 MQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANK 717
+ Q E+ + + +Y D + L+A L LP + + DYY I P+D+ I ++
Sbjct: 2440 LAQIFKEICDGIISYKDSSRQALAAPLLNLPPKKKNADYYEKISDPLDLITIEKQILTGY 2499
Query: 718 YQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLETRRDLEGDEDSHV 771
Y+ +++ D + +F NA Y +S + +D L K R + D V
Sbjct: 2500 YKTVEAFDADMLKVFRNAEKYYGRKSPVGRDVCRLRKAYYNARHEASAQIDEIV 2553
Score = 45.4 bits (106), Expect = 4e-04
Identities = 30/82 (36%), Positives = 35/82 (42%)
Query: 550 PSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYN 609
P KK DYY+ I +P+DL IE I Y E DM +FRNA Y S V
Sbjct: 2470 PPKKKNADYYEKISDPLDLITIEKQILTGYYKTVEAFDADMLKVFRNAEKYYGRKSPVGR 2529
Query: 610 DAHILEKLLKEKRKELGPLPDD 631
D L K R E D+
Sbjct: 2530 DVCRLRKAYYNARHEASAQIDE 2551
>gi|20357588 TBP-associated factor 1 isoform 2 [Homo sapiens]
Length = 1872
Score = 84.0 bits (206), Expect = 1e-15
Identities = 63/229 (27%), Positives = 95/229 (41%), Gaps = 45/229 (19%)
Query: 546 FMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGS 605
F + K DYYKII PMDL+ + N+R Y E E ++L+ +N+ YN
Sbjct: 1405 FHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKH 1464
Query: 606 QVYNDAHILEKLLKEKRKE-----------LGPLPDDDDMASPKLKL----SRKSGISPK 650
+ + + L EK KE + PL DDDD + L ++K P
Sbjct: 1465 SLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPD 1524
Query: 651 KSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIR 710
+ P+ +K +PDYY I PMD+E IR
Sbjct: 1525 SWPFHHPVNKKF------------------------------VPDYYKVIVNPMDLETIR 1554
Query: 711 SHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLET 759
++ +KYQ +S ++D ++ N+ YN PES K A + V +T
Sbjct: 1555 KNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQT 1603
Score = 77.0 bits (188), Expect = 1e-13
Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 34/234 (14%)
Query: 383 SNPFYQLYDTVRSCRNNQGQLIAEPFYHLP-SKKKYPDYYQQIKMPISLQQIRTKLKNQE 441
++P L + S N+ L +H P + K DYY+ I P+ LQ +R ++ +
Sbjct: 1379 TDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRL 1438
Query: 442 YETLDHLECDLNLMFENAKRYNVPNSA---IYKRVLKL-QQVMQAKKKELARRDD----- 492
Y + + L L+ +N+ YN P + I + +L L + ++ K+ +LAR +
Sbjct: 1439 YPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPL 1498
Query: 493 IEDGDSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSK 552
++D D + S D NI Q+M + P S F +K
Sbjct: 1499 LDDDDQVAFSFILD----------NIVTQKMMAV---------PDSWP-----FHHPVNK 1534
Query: 553 KDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQ 606
K PDYYK+I+ PMDL+ I NI KY E ++D+ L+ N+ YN SQ
Sbjct: 1535 KFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQ 1588
Score = 70.9 bits (172), Expect = 9e-12
Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 21/265 (7%)
Query: 26 VSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYY 85
++ P S RRR + T+ ++ + N +RD + F + DYY
Sbjct: 1367 LNRPHKSIHRRRTDPMVTLS--SILESIINDMRDLPNTYP------FHTPVNAKVVKDYY 1418
Query: 86 EVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYL 145
+++++P+DL +++ ++ Y +L+ N+ +Y P + + + DL
Sbjct: 1419 KIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCD 1478
Query: 146 RTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPAYLKEILEQLLEAIVVATNPSGRLIS 205
E ED + + + IL+ ++ ++A S
Sbjct: 1479 EKLKE--------KEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWP--- 1527
Query: 206 ELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEP 265
F +K PDYY +I P+DL+TI + I Y+S + D++L+ N+ YN P
Sbjct: 1528 --FHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGP 1585
Query: 266 GSQVFKDANSIKKIFYMKKAEIEHH 290
SQ K A I + Y E + H
Sbjct: 1586 ESQYTKTAQEIVNVCYQTLTEYDEH 1610
Score = 53.1 bits (126), Expect = 2e-06
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 407 PFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPN 466
PF+H +KK PDYY+ I P+ L+ IR + +Y++ + D+NL+ N+ +YN P
Sbjct: 1527 PFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE 1586
Query: 467 SAIYKRVLKLQQV 479
S K ++ V
Sbjct: 1587 SQYTKTAQEIVNV 1599
>gi|20357585 TBP-associated factor 1 isoform 1 [Homo sapiens]
Length = 1893
Score = 84.0 bits (206), Expect = 1e-15
Identities = 63/229 (27%), Positives = 95/229 (41%), Gaps = 45/229 (19%)
Query: 546 FMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGS 605
F + K DYYKII PMDL+ + N+R Y E E ++L+ +N+ YN
Sbjct: 1426 FHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKH 1485
Query: 606 QVYNDAHILEKLLKEKRKE-----------LGPLPDDDDMASPKLKL----SRKSGISPK 650
+ + + L EK KE + PL DDDD + L ++K P
Sbjct: 1486 SLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPD 1545
Query: 651 KSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIR 710
+ P+ +K +PDYY I PMD+E IR
Sbjct: 1546 SWPFHHPVNKKF------------------------------VPDYYKVIVNPMDLETIR 1575
Query: 711 SHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLET 759
++ +KYQ +S ++D ++ N+ YN PES K A + V +T
Sbjct: 1576 KNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNVCYQT 1624
Score = 77.0 bits (188), Expect = 1e-13
Identities = 66/234 (28%), Positives = 106/234 (45%), Gaps = 34/234 (14%)
Query: 383 SNPFYQLYDTVRSCRNNQGQLIAEPFYHLP-SKKKYPDYYQQIKMPISLQQIRTKLKNQE 441
++P L + S N+ L +H P + K DYY+ I P+ LQ +R ++ +
Sbjct: 1400 TDPMVTLSSILESIINDMRDLPNTYPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKRL 1459
Query: 442 YETLDHLECDLNLMFENAKRYNVPNSA---IYKRVLKL-QQVMQAKKKELARRDD----- 492
Y + + L L+ +N+ YN P + I + +L L + ++ K+ +LAR +
Sbjct: 1460 YPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPL 1519
Query: 493 IEDGDSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSK 552
++D D + S D NI Q+M + P S F +K
Sbjct: 1520 LDDDDQVAFSFILD----------NIVTQKMMAV---------PDSWP-----FHHPVNK 1555
Query: 553 KDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQ 606
K PDYYK+I+ PMDL+ I NI KY E ++D+ L+ N+ YN SQ
Sbjct: 1556 KFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQ 1609
Score = 70.9 bits (172), Expect = 9e-12
Identities = 59/265 (22%), Positives = 108/265 (40%), Gaps = 21/265 (7%)
Query: 26 VSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYY 85
++ P S RRR + T+ ++ + N +RD + F + DYY
Sbjct: 1388 LNRPHKSIHRRRTDPMVTLS--SILESIINDMRDLPNTYP------FHTPVNAKVVKDYY 1439
Query: 86 EVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYL 145
+++++P+DL +++ ++ Y +L+ N+ +Y P + + + DL
Sbjct: 1440 KIITRPMDLQTLRENVRKRLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCD 1499
Query: 146 RTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPAYLKEILEQLLEAIVVATNPSGRLIS 205
E ED + + + IL+ ++ ++A S
Sbjct: 1500 EKLKE--------KEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWP--- 1548
Query: 206 ELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEP 265
F +K PDYY +I P+DL+TI + I Y+S + D++L+ N+ YN P
Sbjct: 1549 --FHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGP 1606
Query: 266 GSQVFKDANSIKKIFYMKKAEIEHH 290
SQ K A I + Y E + H
Sbjct: 1607 ESQYTKTAQEIVNVCYQTLTEYDEH 1631
Score = 53.1 bits (126), Expect = 2e-06
Identities = 25/73 (34%), Positives = 41/73 (56%)
Query: 407 PFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPN 466
PF+H +KK PDYY+ I P+ L+ IR + +Y++ + D+NL+ N+ +YN P
Sbjct: 1548 PFHHPVNKKFVPDYYKVIVNPMDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE 1607
Query: 467 SAIYKRVLKLQQV 479
S K ++ V
Sbjct: 1608 SQYTKTAQEIVNV 1620
>gi|24429572 TBP-associated factor RNA polymerase 1-like [Homo
sapiens]
Length = 1826
Score = 81.3 bits (199), Expect = 7e-15
Identities = 61/229 (26%), Positives = 95/229 (41%), Gaps = 45/229 (19%)
Query: 546 FMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGS 605
F + K DYYKII PMDL+ + N+R Y E E ++L+ +N+ YN
Sbjct: 1424 FHTPVNAKVVKDYYKIITRPMDLQTLRENVRKCLYPSREEFREHLELIVKNSATYNGPKH 1483
Query: 606 QVYNDAHILEKLLKEKRKE-----------LGPLPDDDDMASPKLKL----SRKSGISPK 650
+ + + L EK KE + PL DDDD + L ++K P
Sbjct: 1484 SLTQISQSMLDLCDEKLKEKEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPD 1543
Query: 651 KSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIR 710
+ P+ +K +PDYY I P+D+E IR
Sbjct: 1544 SWPFHHPVNKKF------------------------------VPDYYKMIVNPVDLETIR 1573
Query: 711 SHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHKVLLET 759
++ +KYQ +S ++D ++ N+ YN PES K A + + +T
Sbjct: 1574 KNISKHKYQSRESFLDDVNLILANSVKYNGPESQYTKTAQEIVNICYQT 1622
Score = 73.6 bits (179), Expect = 1e-12
Identities = 65/234 (27%), Positives = 105/234 (44%), Gaps = 34/234 (14%)
Query: 383 SNPFYQLYDTVRSCRNNQGQLIAEPFYHLP-SKKKYPDYYQQIKMPISLQQIRTKLKNQE 441
++P L + S N+ L +H P + K DYY+ I P+ LQ +R ++
Sbjct: 1398 TDPMVTLSSILESIINDMRDLPNTHPFHTPVNAKVVKDYYKIITRPMDLQTLRENVRKCL 1457
Query: 442 YETLDHLECDLNLMFENAKRYNVPNSA---IYKRVLKL-QQVMQAKKKELARRDD----- 492
Y + + L L+ +N+ YN P + I + +L L + ++ K+ +LAR +
Sbjct: 1458 YPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCDEKLKEKEDKLARLEKAINPL 1517
Query: 493 IEDGDSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSK 552
++D D + S D NI Q+M + P S F +K
Sbjct: 1518 LDDDDQVAFSFILD----------NIVTQKMMAV---------PDSWP-----FHHPVNK 1553
Query: 553 KDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQ 606
K PDYYK+I+ P+DL+ I NI KY E ++D+ L+ N+ YN SQ
Sbjct: 1554 KFVPDYYKMIVNPVDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPESQ 1607
Score = 69.7 bits (169), Expect = 2e-11
Identities = 60/265 (22%), Positives = 108/265 (40%), Gaps = 21/265 (7%)
Query: 26 VSTPGPSRKRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELFIRAPKRRNQPDYY 85
++ P S RRR + T+ ++ + N +RD + F + DYY
Sbjct: 1386 LNIPHKSIHRRRTDPMVTLS--SILESIINDMRDLPNTHP------FHTPVNAKVVKDYY 1437
Query: 86 EVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWDLYL 145
+++++P+DL +++ ++ Y +L+ N+ +Y P + + + DL
Sbjct: 1438 KIITRPMDLQTLRENVRKCLYPSREEFREHLELIVKNSATYNGPKHSLTQISQSMLDLCD 1497
Query: 146 RTRNEFVQKGEADDEDDDEDGQDNQGTVTEGSSPAYLKEILEQLLEAIVVATNPSGRLIS 205
E ED + + + IL+ ++ ++A S
Sbjct: 1498 EKLKE--------KEDKLARLEKAINPLLDDDDQVAFSFILDNIVTQKMMAVPDSWP--- 1546
Query: 206 ELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEP 265
F +K PDYY +I P+DL+TI + I Y+S + D++L+ N+ YN P
Sbjct: 1547 --FHHPVNKKFVPDYYKMIVNPVDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGP 1604
Query: 266 GSQVFKDANSIKKIFYMKKAEIEHH 290
SQ K A I I Y E + H
Sbjct: 1605 ESQYTKTAQEIVNICYQTITEYDEH 1629
Score = 54.3 bits (129), Expect = 9e-07
Identities = 24/73 (32%), Positives = 41/73 (56%)
Query: 407 PFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPN 466
PF+H +KK PDYY+ I P+ L+ IR + +Y++ + D+NL+ N+ +YN P
Sbjct: 1546 PFHHPVNKKFVPDYYKMIVNPVDLETIRKNISKHKYQSRESFLDDVNLILANSVKYNGPE 1605
Query: 467 SAIYKRVLKLQQV 479
S K ++ +
Sbjct: 1606 SQYTKTAQEIVNI 1618
>gi|16445438 bromodomain and WD repeat domain containing 1 isoform B
[Homo sapiens]
Length = 2269
Score = 74.7 bits (182), Expect = 7e-13
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 30/232 (12%)
Query: 417 YPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYK----- 471
YP Y + P L IR +L N+ Y L L ++ + NA+ +N P S I +
Sbjct: 1194 YPKYCTVVAYPTDLYTIRMRLVNRFYRRLSALVWEVRYIEHNARTFNEPESVIARSAKKI 1253
Query: 472 -----RVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRK---SKKNIR---- 519
+ +K Q + +D ++ + + S T S +R+ KK+IR
Sbjct: 1254 TDQLLKFIKNQHCTNISELSNTSENDEQNAEDLDDSDLPKTSSGRRRVHDGKKSIRATNY 1313
Query: 520 -----KQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHN 574
K++ K L N++ + + R+ DL +YPDY II PMD +
Sbjct: 1314 VESNWKKQCKELVNLIFQCEDSEPFRQPVDLV-------EYPDYRDIIDTPMDFGTVRET 1366
Query: 575 IRNDKYAGEEGMIEDMKLMFRNARHYN-EEGSQVYNDAHILEKLLKEKRKEL 625
+ Y +D++L+F NA+ Y + S++Y+ L L +EK K++
Sbjct: 1367 LDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKI 1418
Score = 70.9 bits (172), Expect = 9e-12
Identities = 72/326 (22%), Positives = 127/326 (38%), Gaps = 58/326 (17%)
Query: 217 YPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
YP Y ++ P DL TI R+ N Y+ + A+ ++ + NA+T+NEP S + A S
Sbjct: 1194 YPKYCTVVAYPTDLYTIRMRLVNRFYRRLSALVWEVRYIEHNARTFNEPESVI---ARSA 1250
Query: 277 KKIFYMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNKRA 336
KKI + ++ + +N++ T + + + + + K +R
Sbjct: 1251 KKI----------TDQLLKFIKNQHCTNISELSNTSENDEQNAEDLDDSDLPKTSSGRRR 1300
Query: 337 VQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSC 396
V G+ S + A Y E + + ++ N +Q D
Sbjct: 1301 VHDGKKS-----------------IRATNYVESNWKKQC----KELVNLIFQCED----- 1334
Query: 397 RNNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMF 456
+EPF +YPDY I P+ +R L Y++ D+ L+F
Sbjct: 1335 --------SEPFRQPVDLVEYPDYRDIIDTPMDFGTVRETLDAGNYDSPLEFCKDIRLIF 1386
Query: 457 ENAKRYNVPN--SAIYKRVLKLQQVMQAKKKELAR--------RDDIEDGDSMISSATSD 506
NAK Y PN S IY L+L + + K K+++ + +
Sbjct: 1387 SNAKAY-TPNKRSKIYSMTLRLSALFEEKMKKISSDFKIGQKFNEKLRRSQRFKQRQNCK 1445
Query: 507 TGSAKRKSKKNIRKQRMKILFNVVLE 532
S KS +N++ +R+K ++ E
Sbjct: 1446 GDSQPNKSIRNLKPKRLKSQTKIIPE 1471
Score = 65.1 bits (157), Expect = 5e-10
Identities = 57/230 (24%), Positives = 100/230 (43%), Gaps = 30/230 (13%)
Query: 82 PDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLW 141
P Y VV+ P DL I+ +L Y ++ L + + + +NA+++ +P+S ++A K+
Sbjct: 1195 PKYCTVVAYPTDLYTIRMRLVNRFYRRLSALVWEVRYIEHNARTFNEPESVIARSAKKIT 1254
Query: 142 DLYLR-------TRNEFVQKGEADDEDDDEDGQDNQGTVTEGSS---------------- 178
D L+ T + +DE + ED D+ T
Sbjct: 1255 DQLLKFIKNQHCTNISELSNTSENDEQNAEDLDDSDLPKTSSGRRRVHDGKKSIRATNYV 1314
Query: 179 PAYLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQ 238
+ K+ ++L+ I + SE F++ V+YPDY II P+D T+ + +
Sbjct: 1315 ESNWKKQCKELVNLIFQCED------SEPFRQPVDLVEYPDYRDIIDTPMDFGTVRETLD 1368
Query: 239 NGSYKSIHAMAKDIDLLAKNAKTYN-EPGSQVFKDANSIKKIFYMKKAEI 287
G+Y S KDI L+ NAK Y S+++ + +F K +I
Sbjct: 1369 AGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKI 1418
Score = 51.2 bits (121), Expect = 8e-06
Identities = 57/234 (24%), Positives = 87/234 (37%), Gaps = 28/234 (11%)
Query: 555 YPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAH-I 613
YP Y ++ P DL I + N Y ++ +++ + NAR +NE S + A I
Sbjct: 1194 YPKYCTVVAYPTDLYTIRMRLVNRFYRRLSALVWEVRYIEHNARTFNEPESVIARSAKKI 1253
Query: 614 LEKLLK---------------EKRKELGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPM 658
++LLK + D DD PK R+ KKS T
Sbjct: 1254 TDQLLKFIKNQHCTNISELSNTSENDEQNAEDLDDSDLPKTSSGRRRVHDGKKSIRATNY 1313
Query: 659 -----QQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHM 713
+++ E+ + D S F + E PDY I PMD +R +
Sbjct: 1314 VESNWKKQCKELVNLIFQCED------SEPFRQPVDLVEYPDYRDIIDTPMDFGTVRETL 1367
Query: 714 MANKYQDIDSMVEDFVMMFNNACTYN-EPESLIYKDALVLHKVLLETRRDLEGD 766
A Y +D ++F+NA Y S IY L L + E + + D
Sbjct: 1368 DAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKISSD 1421
Score = 41.6 bits (96), Expect = 0.006
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 17/142 (11%)
Query: 18 DFDDGHHSVSTPGPSR-----KRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELF 72
D DD ++ G R K R +N + C EL N I +D E F
Sbjct: 1285 DLDDSDLPKTSSGRRRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDS------EPF 1338
Query: 73 IRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSP 132
+ PDY +++ P+D +++ L YD D +L+F+NAK+Y +P
Sbjct: 1339 RQPVDLVEYPDYRDIIDTPMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAY----TP 1394
Query: 133 EYKAACKLWDLYLRTRNEFVQK 154
++ K++ + LR F +K
Sbjct: 1395 NKRS--KIYSMTLRLSALFEEK 1414
>gi|16445436 bromodomain and WD repeat domain containing 1 isoform A
[Homo sapiens]
Length = 2320
Score = 74.7 bits (182), Expect = 7e-13
Identities = 59/232 (25%), Positives = 101/232 (43%), Gaps = 30/232 (12%)
Query: 417 YPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYK----- 471
YP Y + P L IR +L N+ Y L L ++ + NA+ +N P S I +
Sbjct: 1194 YPKYCTVVAYPTDLYTIRMRLVNRFYRRLSALVWEVRYIEHNARTFNEPESVIARSAKKI 1253
Query: 472 -----RVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRK---SKKNIR---- 519
+ +K Q + +D ++ + + S T S +R+ KK+IR
Sbjct: 1254 TDQLLKFIKNQHCTNISELSNTSENDEQNAEDLDDSDLPKTSSGRRRVHDGKKSIRATNY 1313
Query: 520 -----KQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHN 574
K++ K L N++ + + R+ DL +YPDY II PMD +
Sbjct: 1314 VESNWKKQCKELVNLIFQCEDSEPFRQPVDLV-------EYPDYRDIIDTPMDFGTVRET 1366
Query: 575 IRNDKYAGEEGMIEDMKLMFRNARHYN-EEGSQVYNDAHILEKLLKEKRKEL 625
+ Y +D++L+F NA+ Y + S++Y+ L L +EK K++
Sbjct: 1367 LDAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKI 1418
Score = 70.9 bits (172), Expect = 9e-12
Identities = 72/326 (22%), Positives = 127/326 (38%), Gaps = 58/326 (17%)
Query: 217 YPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
YP Y ++ P DL TI R+ N Y+ + A+ ++ + NA+T+NEP S + A S
Sbjct: 1194 YPKYCTVVAYPTDLYTIRMRLVNRFYRRLSALVWEVRYIEHNARTFNEPESVI---ARSA 1250
Query: 277 KKIFYMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNKRA 336
KKI + ++ + +N++ T + + + + + K +R
Sbjct: 1251 KKI----------TDQLLKFIKNQHCTNISELSNTSENDEQNAEDLDDSDLPKTSSGRRR 1300
Query: 337 VQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMDVSNPFYQLYDTVRSC 396
V G+ S + A Y E + + ++ N +Q D
Sbjct: 1301 VHDGKKS-----------------IRATNYVESNWKKQC----KELVNLIFQCED----- 1334
Query: 397 RNNQGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMF 456
+EPF +YPDY I P+ +R L Y++ D+ L+F
Sbjct: 1335 --------SEPFRQPVDLVEYPDYRDIIDTPMDFGTVRETLDAGNYDSPLEFCKDIRLIF 1386
Query: 457 ENAKRYNVPN--SAIYKRVLKLQQVMQAKKKELAR--------RDDIEDGDSMISSATSD 506
NAK Y PN S IY L+L + + K K+++ + +
Sbjct: 1387 SNAKAY-TPNKRSKIYSMTLRLSALFEEKMKKISSDFKIGQKFNEKLRRSQRFKQRQNCK 1445
Query: 507 TGSAKRKSKKNIRKQRMKILFNVVLE 532
S KS +N++ +R+K ++ E
Sbjct: 1446 GDSQPNKSIRNLKPKRLKSQTKIIPE 1471
Score = 65.1 bits (157), Expect = 5e-10
Identities = 57/230 (24%), Positives = 100/230 (43%), Gaps = 30/230 (13%)
Query: 82 PDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLW 141
P Y VV+ P DL I+ +L Y ++ L + + + +NA+++ +P+S ++A K+
Sbjct: 1195 PKYCTVVAYPTDLYTIRMRLVNRFYRRLSALVWEVRYIEHNARTFNEPESVIARSAKKIT 1254
Query: 142 DLYLR-------TRNEFVQKGEADDEDDDEDGQDNQGTVTEGSS---------------- 178
D L+ T + +DE + ED D+ T
Sbjct: 1255 DQLLKFIKNQHCTNISELSNTSENDEQNAEDLDDSDLPKTSSGRRRVHDGKKSIRATNYV 1314
Query: 179 PAYLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQ 238
+ K+ ++L+ I + SE F++ V+YPDY II P+D T+ + +
Sbjct: 1315 ESNWKKQCKELVNLIFQCED------SEPFRQPVDLVEYPDYRDIIDTPMDFGTVRETLD 1368
Query: 239 NGSYKSIHAMAKDIDLLAKNAKTYN-EPGSQVFKDANSIKKIFYMKKAEI 287
G+Y S KDI L+ NAK Y S+++ + +F K +I
Sbjct: 1369 AGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKI 1418
Score = 51.2 bits (121), Expect = 8e-06
Identities = 57/234 (24%), Positives = 87/234 (37%), Gaps = 28/234 (11%)
Query: 555 YPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAH-I 613
YP Y ++ P DL I + N Y ++ +++ + NAR +NE S + A I
Sbjct: 1194 YPKYCTVVAYPTDLYTIRMRLVNRFYRRLSALVWEVRYIEHNARTFNEPESVIARSAKKI 1253
Query: 614 LEKLLK---------------EKRKELGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPM 658
++LLK + D DD PK R+ KKS T
Sbjct: 1254 TDQLLKFIKNQHCTNISELSNTSENDEQNAEDLDDSDLPKTSSGRRRVHDGKKSIRATNY 1313
Query: 659 -----QQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSELPDYYLTIKKPMDMEKIRSHM 713
+++ E+ + D S F + E PDY I PMD +R +
Sbjct: 1314 VESNWKKQCKELVNLIFQCED------SEPFRQPVDLVEYPDYRDIIDTPMDFGTVRETL 1367
Query: 714 MANKYQDIDSMVEDFVMMFNNACTYN-EPESLIYKDALVLHKVLLETRRDLEGD 766
A Y +D ++F+NA Y S IY L L + E + + D
Sbjct: 1368 DAGNYDSPLEFCKDIRLIFSNAKAYTPNKRSKIYSMTLRLSALFEEKMKKISSD 1421
Score = 41.6 bits (96), Expect = 0.006
Identities = 37/142 (26%), Positives = 61/142 (42%), Gaps = 17/142 (11%)
Query: 18 DFDDGHHSVSTPGPSR-----KRRRLSNLPTVDPIAVCHELYNTIRDYKDEQGRLLCELF 72
D DD ++ G R K R +N + C EL N I +D E F
Sbjct: 1285 DLDDSDLPKTSSGRRRVHDGKKSIRATNYVESNWKKQCKELVNLIFQCEDS------EPF 1338
Query: 73 IRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSP 132
+ PDY +++ P+D +++ L YD D +L+F+NAK+Y +P
Sbjct: 1339 RQPVDLVEYPDYRDIIDTPMDFGTVRETLDAGNYDSPLEFCKDIRLIFSNAKAY----TP 1394
Query: 133 EYKAACKLWDLYLRTRNEFVQK 154
++ K++ + LR F +K
Sbjct: 1395 NKRS--KIYSMTLRLSALFEEK 1414
>gi|34996489 pleckstrin homology domain interacting protein [Homo
sapiens]
Length = 1821
Score = 73.9 bits (180), Expect = 1e-12
Identities = 60/223 (26%), Positives = 103/223 (46%), Gaps = 35/223 (15%)
Query: 68 LCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYY 127
+ F+ + P Y VV+ P DL I+Q+L+ Y V+ L + + + +N +++
Sbjct: 1180 IASAFVAPVDLQAYPMYCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFN 1239
Query: 128 KPDSPEYKAACKLWDLYLR------------TRNEFVQKGEADDEDDDEDGQDNQGTVTE 175
+P SP K+A + DL L N +K +D ED+++D D GT T
Sbjct: 1240 EPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEDEEKDA-DVPGTSTR 1298
Query: 176 ------------GSSPAY----LKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYPD 219
+ +Y K+ E+LL I + SE F++ ++YPD
Sbjct: 1299 KRKDHQPRRRLRNRAQSYDIQAWKKQCEELLNLIFQCED------SEPFRQPVDLLEYPD 1352
Query: 220 YYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTY 262
Y II P+D T+ + ++ G+Y+S + KD+ L+ N+K Y
Sbjct: 1353 YRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAY 1395
Score = 61.2 bits (147), Expect = 7e-09
Identities = 55/244 (22%), Positives = 99/244 (40%), Gaps = 34/244 (13%)
Query: 404 IAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYN 463
IA F + YP Y + P L I+ +L+N+ Y + L ++ + N + +N
Sbjct: 1180 IASAFVAPVDLQAYPMYCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFN 1239
Query: 464 VPNSAIYKRVLKLQQVM-----------------QAKKKELARRDDIE-DGDSMISSATS 505
P S I K + ++ KKK L+ +D E D D +S
Sbjct: 1240 EPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEDEEKDADVPGTSTRK 1299
Query: 506 DTGSAKRKSKKN--------IRKQRMKILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPD 557
R+ +N K++ + L N++ + + R+ DL +YPD
Sbjct: 1300 RKDHQPRRRLRNRAQSYDIQAWKKQCEELLNLIFQCEDSEPFRQPVDLL-------EYPD 1352
Query: 558 YYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYN-EEGSQVYNDAHILEK 616
Y II PMD + + Y + +D++L+F N++ Y + S++Y+ + L
Sbjct: 1353 YRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSRIYSMSLRLSA 1412
Query: 617 LLKE 620
+E
Sbjct: 1413 FFEE 1416
Score = 54.7 bits (130), Expect = 7e-07
Identities = 55/231 (23%), Positives = 92/231 (39%), Gaps = 20/231 (8%)
Query: 542 LCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYN 601
+ F+ + YP Y ++ P DL I+ + N Y ++ +++ + N R +N
Sbjct: 1180 IASAFVAPVDLQAYPMYCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFN 1239
Query: 602 EEGSQVYNDAHILEKLLKEKRKE---LGPLPDDDDMASPKLKLSRKS-------GISPKK 651
E GS + A + LL K+ +P + M L S G S +K
Sbjct: 1240 EPGSPIVKSAKFVTDLLLHFIKDQTCYNIIPLYNSMKKKVLSDSEDEEKDADVPGTSTRK 1299
Query: 652 SKYMTPMQQKLNEVYE-AVKNYTDKRGRRLSAIF-------LRLP-SRSELPDYYLTIKK 702
K P ++ N ++ + + L+ IF R P E PDY I
Sbjct: 1300 RKDHQPRRRLRNRAQSYDIQAWKKQCEELLNLIFQCEDSEPFRQPVDLLEYPDYRDIIDT 1359
Query: 703 PMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYN-EPESLIYKDALVL 752
PMD +R + A Y+ + +D ++F+N+ Y S IY +L L
Sbjct: 1360 PMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTPSKRSRIYSMSLRL 1410
Score = 52.8 bits (125), Expect = 3e-06
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 217 YPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
YP Y ++ P DL TI QR++N Y+ + ++ ++ + N +T+NEPGS + K A +
Sbjct: 1193 YPMYCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFV 1252
Score = 45.4 bits (106), Expect = 4e-04
Identities = 39/122 (31%), Positives = 52/122 (42%), Gaps = 18/122 (14%)
Query: 405 AEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYN- 463
+EPF +YPDY I P+ +R L+ YE+ L D+ L+F N+K Y
Sbjct: 1338 SEPFRQPVDLLEYPDYRDIIDTPMDFATVRETLEAGNYESPMELCKDVRLIFSNSKAYTP 1397
Query: 464 VPNSAIYKRVLKLQQVMQAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKN-IRKQR 522
S IY L+L + ISS SD SA R K+N I K+R
Sbjct: 1398 SKRSRIYSMSLRLSAFF----------------EEHISSVLSDYKSALRFHKRNTITKRR 1441
Query: 523 MK 524
K
Sbjct: 1442 KK 1443
Score = 34.7 bits (78), Expect = 0.75
Identities = 19/69 (27%), Positives = 34/69 (49%)
Query: 694 PDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLH 753
P Y + P D+ I+ + Y+ + S++ + + +N T+NEP S I K A +
Sbjct: 1194 PMYCTVVAYPTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVT 1253
Query: 754 KVLLETRRD 762
+LL +D
Sbjct: 1254 DLLLHFIKD 1262
Score = 31.2 bits (69), Expect = 8.3
Identities = 26/117 (22%), Positives = 44/117 (37%), Gaps = 5/117 (4%)
Query: 819 PLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQQFFIK-IRD 877
P I++ +EN YRR+ + + R N S I + A + + I+D
Sbjct: 1203 PTDLSTIKQRLENRFYRRVSSLMWEVRYIEHNTRTFNEPGSPIVKSAKFVTDLLLHFIKD 1262
Query: 878 ELCKNGEILLSPALSYTTKHLHNDVEKERKEKLPKEIEEDKLKREEEKREAEKSEDS 934
+ C N + P + K + +D E E K+ K K + +R S
Sbjct: 1263 QTCYN----IIPLYNSMKKKVLSDSEDEEKDADVPGTSTRKRKDHQPRRRLRNRAQS 1315
>gi|40805843 K(lysine) acetyltransferase 2B [Homo sapiens]
Length = 832
Score = 60.5 bits (145), Expect = 1e-08
Identities = 52/222 (23%), Positives = 97/222 (43%), Gaps = 22/222 (9%)
Query: 416 KYPDYYQQIKMPISLQQIRTKLKN--QEYETLDHLECDLN--LMFENAKRYNVPNSAIYK 471
K + ++IK+P +TK ++YE + C+LN + + I K
Sbjct: 618 KKQGFSKEIKIP------KTKYVGYIKDYEGATLMGCELNPRIPYTEFSVIIKKQKEIIK 671
Query: 472 RVLKLQQVMQAKK-------KELARRDDIEDGDSMISSATSDTGSAKRKSKKNIRKQRMK 524
++++ +Q K K+ R+ IE + + +G K K ++ +
Sbjct: 672 KLIERKQAQIRKVYPGLSCFKDGVRQIPIESIPGIRETGWKPSGKEKSKEPRDPDQ---- 727
Query: 525 ILFNVVLEAREPGSGRRLCDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEE 584
L++ + + + FM + + P YY++I PMDLK + ++N Y ++
Sbjct: 728 -LYSTLKSILQQVKSHQSAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLKNRYYVSKK 786
Query: 585 GMIEDMKLMFRNARHYNEEGSQVYNDAHILEKLLKEKRKELG 626
+ D++ +F N + YN S+ Y A+ILEK K KE G
Sbjct: 787 LFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKEAG 828
Score = 60.1 bits (144), Expect = 2e-08
Identities = 28/79 (35%), Positives = 46/79 (58%)
Query: 208 FQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGS 267
F + + + P YY +I+ P+DLKT+++R++N Y S D+ + N K YN P S
Sbjct: 748 FMEPVKRTEAPGYYEVIRFPMDLKTMSERLKNRYYVSKKLFMADLQRVFTNCKEYNPPES 807
Query: 268 QVFKDANSIKKIFYMKKAE 286
+ +K AN ++K F+ K E
Sbjct: 808 EYYKCANILEKFFFSKIKE 826
Score = 55.8 bits (133), Expect = 3e-07
Identities = 33/100 (33%), Positives = 50/100 (50%), Gaps = 1/100 (1%)
Query: 388 QLYDTVRSCRNN-QGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLD 446
QLY T++S + A PF + + P YY+ I+ P+ L+ + +LKN+ Y +
Sbjct: 727 QLYSTLKSILQQVKSHQSAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLKNRYYVSKK 786
Query: 447 HLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKE 486
DL +F N K YN P S YK L++ +K KE
Sbjct: 787 LFMADLQRVFTNCKEYNPPESEYYKCANILEKFFFSKIKE 826
Score = 55.8 bits (133), Expect = 3e-07
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 52 ELYNTIRDYKDE-QGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVN 110
+LY+T++ + + F+ KR P YYEV+ P+DL + ++LK Y
Sbjct: 727 QLYSTLKSILQQVKSHQSAWPFMEPVKRTEAPGYYEVIRFPMDLKTMSERLKNRYYVSKK 786
Query: 111 LLTADFQLLFNNAKSYYKPDSPEYKAA 137
L AD Q +F N K Y P+S YK A
Sbjct: 787 LFMADLQRVFTNCKEYNPPESEYYKCA 813
Score = 47.8 bits (112), Expect = 9e-05
Identities = 34/114 (29%), Positives = 52/114 (45%), Gaps = 4/114 (3%)
Query: 643 RKSGISPK-KSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAI-FLRLPSRSELPDYYLTI 700
R++G P K K P +++Y +K+ + SA F+ R+E P YY I
Sbjct: 707 RETGWKPSGKEKSKEPRDP--DQLYSTLKSILQQVKSHQSAWPFMEPVKRTEAPGYYEVI 764
Query: 701 KKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVLHK 754
+ PMD++ + + Y + D +F N YN PES YK A +L K
Sbjct: 765 RFPMDLKTMSERLKNRYYVSKKLFMADLQRVFTNCKEYNPPESEYYKCANILEK 818
>gi|11067749 bromodomain containing protein 3 [Homo sapiens]
Length = 726
Score = 60.1 bits (144), Expect = 2e-08
Identities = 32/106 (30%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
Query: 188 QLLEAIVVATNPSGRLISELFQKLPS-KVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIH 246
Q ++ +VV T + +Q + + K+ PDY+ IIK P+D+ TI +R++N Y S
Sbjct: 40 QYMQNVVVKTLWKHQFAWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSAS 99
Query: 247 AMAKDIDLLAKNAKTYNEPGSQVFKDANSIKKIFYMKKAEIEHHEM 292
+D + + N YN+P + A +++KIF K A++ E+
Sbjct: 100 ECMQDFNTMFTNCYIYNKPTDDIVLMAQALEKIFLQKVAQMPQEEV 145
Score = 52.8 bits (125), Expect = 3e-06
Identities = 28/80 (35%), Positives = 39/80 (48%)
Query: 693 LPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVL 752
LPDY+ IK PMDM I+ + N Y ++DF MF N YN+P I A L
Sbjct: 70 LPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQAL 129
Query: 753 HKVLLETRRDLEGDEDSHVP 772
K+ L+ + +E +P
Sbjct: 130 EKIFLQKVAQMPQEEVELLP 149
Score = 52.8 bits (125), Expect = 3e-06
Identities = 33/124 (26%), Positives = 54/124 (43%), Gaps = 17/124 (13%)
Query: 83 DYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWD 142
DY++++ P+DL +++K+ EY D AD +L+F+N Y PD A KL D
Sbjct: 347 DYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQD 406
Query: 143 L----YLRTRNE-------------FVQKGEADDEDDDEDGQDNQGTVTEGSSPAYLKEI 185
+ + + +E V KG +E D+ + +E L E+
Sbjct: 407 VFEMRFAKMPDEPVEAPALPAPAAPMVSKGAESSRSSEESSSDSGSSDSEEERATRLAEL 466
Query: 186 LEQL 189
EQL
Sbjct: 467 QEQL 470
Score = 51.6 bits (122), Expect = 6e-06
Identities = 39/156 (25%), Positives = 67/156 (42%), Gaps = 9/156 (5%)
Query: 219 DYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKK 278
DY+ IIK P+DL T+ +++ Y A D+ L+ N YN P +V A ++
Sbjct: 347 DYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQD 406
Query: 279 IFYMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGSLGEERNPTSKYYRNKRAVQ 338
+F M+ A++ + +L P+ A G S+ S + S +RA +
Sbjct: 407 VFEMRFAKMPDEPVEAPAL----PAPAAPMVSKGAESSRSSEESSSDSGSSDSEEERATR 462
Query: 339 GGRLSAITMALQYGSESEEDAALAAARYEEGESEAE 374
L Q + E+ AAL+ A + + + E
Sbjct: 463 LAELQE-----QLKAVHEQLAALSQAPVNKPKKKKE 493
Score = 48.5 bits (114), Expect = 5e-05
Identities = 24/70 (34%), Positives = 36/70 (51%)
Query: 552 KKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDA 611
K + PDY+KII PMD+ I+ + N+ Y ++D MF N YN+ + A
Sbjct: 67 KLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMA 126
Query: 612 HILEKLLKEK 621
LEK+ +K
Sbjct: 127 QALEKIFLQK 136
Score = 47.4 bits (111), Expect = 1e-04
Identities = 58/238 (24%), Positives = 89/238 (37%), Gaps = 64/238 (26%)
Query: 692 ELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALV 751
EL DY+ IK PMD+ ++ M +Y D D +MF+N YN P+
Sbjct: 344 ELHDYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKYNPPD--------- 394
Query: 752 LHKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVD 811
H+V+ R+ +Q++ F + D E PA+
Sbjct: 395 -HEVVAMARK----------------LQDVFEMRFAKM-----------PDEPVEAPAL- 425
Query: 812 PNFPNKPPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDA--VELQ 869
P ++ K E++R E + +DSE ELQ
Sbjct: 426 ------PAPAAPMVSKGAESSRSSE------------ESSSDSGSSDSEEERATRLAELQ 467
Query: 870 QFFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKERKEK-LPKEIEEDKLKREEEKR 926
+ + ++L LS A K EKE+K+K KE E+ K+K EEEK+
Sbjct: 468 EQLKAVHEQLA-----ALSQAPVNKPKKKKEKKEKEKKKKDKEKEKEKHKVKAEEEKK 520
Score = 47.4 bits (111), Expect = 1e-04
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 419 DYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQ 478
DY+ IK P+ L ++ K+ +EY D+ LMF N +YN P+ + KLQ
Sbjct: 347 DYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQD 406
Query: 479 VMQAK 483
V + +
Sbjct: 407 VFEMR 411
Score = 44.3 bits (103), Expect = 0.001
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 2/89 (2%)
Query: 405 AEPFYHLPS--KKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRY 462
A PFY K PDY++ IK P+ + I+ +L+N Y + D N MF N Y
Sbjct: 56 AWPFYQPVDAIKLNLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIY 115
Query: 463 NVPNSAIYKRVLKLQQVMQAKKKELARRD 491
N P I L+++ K ++ + +
Sbjct: 116 NKPTDDIVLMAQALEKIFLQKVAQMPQEE 144
Score = 42.7 bits (99), Expect = 0.003
Identities = 31/139 (22%), Positives = 61/139 (43%), Gaps = 2/139 (1%)
Query: 557 DYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEK 616
DY+ II PMDL ++ + +Y +G D++LMF N YN +V A L+
Sbjct: 347 DYHDIIKHPMDLSTVKRKMDGREYPDAQGFAADVRLMFSNCYKYNPPDHEVVAMARKLQD 406
Query: 617 LLKEKRKELGPLP-DDDDMASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTDK 675
+ + + ++ P + + +P + K S + S+ + + E +
Sbjct: 407 VFEMRFAKMPDEPVEAPALPAPAAPMVSKGAESSRSSEESSSDSGSSDSEEERATRLAEL 466
Query: 676 RGRRLSAIFLRLPSRSELP 694
+ +L A+ +L + S+ P
Sbjct: 467 Q-EQLKAVHEQLAALSQAP 484
Score = 39.7 bits (91), Expect = 0.023
Identities = 19/67 (28%), Positives = 34/67 (50%)
Query: 80 NQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACK 139
N PDY++++ P+D+ I+++L+ Y + DF +F N Y KP A
Sbjct: 69 NLPDYHKIIKNPMDMGTIKKRLENNYYWSASECMQDFNTMFTNCYIYNKPTDDIVLMAQA 128
Query: 140 LWDLYLR 146
L ++L+
Sbjct: 129 LEKIFLQ 135
>gi|7657218 bromodomain-containing protein 4 isoform short [Homo
sapiens]
Length = 722
Score = 59.3 bits (142), Expect = 3e-08
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 214 KVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDA 273
K+ PDYY IIK P+D+ TI +R++N Y + +D + + N YN+PG + A
Sbjct: 91 KLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMA 150
Query: 274 NSIKKIFYMKKAEIEHHE 291
+++K+F K E+ E
Sbjct: 151 EALEKLFLQKINELPTEE 168
Score = 58.2 bits (139), Expect = 6e-08
Identities = 30/74 (40%), Positives = 40/74 (54%)
Query: 552 KKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDA 611
K + PDYYKII PMD+ I+ + N+ Y + I+D MF N YN+ G + A
Sbjct: 91 KLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMA 150
Query: 612 HILEKLLKEKRKEL 625
LEKL +K EL
Sbjct: 151 EALEKLFLQKINEL 164
Score = 55.1 bits (131), Expect = 5e-07
Identities = 29/75 (38%), Positives = 39/75 (52%)
Query: 693 LPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVL 752
LPDYY IK PMDM I+ + N Y + ++DF MF N YN+P I A L
Sbjct: 94 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153
Query: 753 HKVLLETRRDLEGDE 767
K+ L+ +L +E
Sbjct: 154 EKLFLQKINELPTEE 168
Score = 50.1 bits (118), Expect = 2e-05
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 219 DYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKK 278
DY IIK P+D+ TI +++ Y+ D+ L+ N YN P +V A ++
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448
Query: 279 IFYMKKA----EIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGS 319
+F M+ A E E +A SS + P+ + A + S S S
Sbjct: 449 VFEMRFAKMPDEPEEPVVAVSSPAVPPPTKVVAPPSSSDSSSDSS 493
Score = 48.5 bits (114), Expect = 5e-05
Identities = 61/243 (25%), Positives = 98/243 (40%), Gaps = 68/243 (27%)
Query: 693 LPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVL 752
L DY IK PMDM I+S + A +Y+D D +MF+N YN P+
Sbjct: 387 LHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPD---------- 436
Query: 753 HKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDP 812
H+V+ R+ +Q++ F + ++ S PAV P
Sbjct: 437 HEVVAMARK----------------LQDVFEMRFAKMPDEPEEPVVAVSS-----PAVPP 475
Query: 813 NFPNK---PPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQ 869
P K PP + D + ++ D + ERA+R+ ELQ
Sbjct: 476 --PTKVVAPPSSSDSSSDSSSDSDSSTDDSEE-------ERAQRL-----------AELQ 515
Query: 870 QFFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKERKEKLPKEIEEDKLKREEEKREAE 929
+ + ++L ALS ++ EK++KEK +++K KR+EE E +
Sbjct: 516 EQLKAVHEQLA---------ALSQPQQNKPKKKEKDKKEK-----KKEKHKRKEEVEENK 561
Query: 930 KSE 932
KS+
Sbjct: 562 KSK 564
Score = 48.1 bits (113), Expect = 7e-05
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 83 DYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWD 142
DY +++ P+D+ I+ KL+ EY D AD +L+F+N Y PD A KL D
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448
Query: 143 LY 144
++
Sbjct: 449 VF 450
Score = 47.8 bits (112), Expect = 9e-05
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 419 DYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQ 478
DY IK P+ + I++KL+ +EY D+ LMF N +YN P+ + KLQ
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448
Query: 479 VMQAK 483
V + +
Sbjct: 449 VFEMR 453
Score = 46.2 bits (108), Expect = 2e-04
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 414 KKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRV 473
K PDYY+ IK P+ + I+ +L+N Y D N MF N YN P I
Sbjct: 91 KLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMA 150
Query: 474 LKLQQVMQAKKKELARRDDIEDGDSMISSA------TSDTGSAK 511
L+++ K EL E+ + MI A +TG+AK
Sbjct: 151 EALEKLFLQKINEL----PTEETEIMIVQAKGRGRGRKETGTAK 190
Score = 44.3 bits (103), Expect = 0.001
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 80 NQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACK 139
N PDYY+++ P+D+ I+++L+ Y + DF +F N Y KP A
Sbjct: 93 NLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEA 152
Query: 140 LWDLYLRTRNE 150
L L+L+ NE
Sbjct: 153 LEKLFLQKINE 163
Score = 37.7 bits (86), Expect = 0.089
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 557 DYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEK 616
DY II PMD+ I+ + +Y + D++LMF N YN +V A L+
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448
Query: 617 LLKEKRKELGPLPDDDDMA--SPKLKLSRKSGISPKKS 652
+ + + ++ P++ +A SP + K P S
Sbjct: 449 VFEMRFAKMPDEPEEPVVAVSSPAVPPPTKVVAPPSSS 486
>gi|19718731 bromodomain-containing protein 4 isoform long [Homo
sapiens]
Length = 1362
Score = 59.3 bits (142), Expect = 3e-08
Identities = 27/78 (34%), Positives = 44/78 (56%)
Query: 214 KVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDA 273
K+ PDYY IIK P+D+ TI +R++N Y + +D + + N YN+PG + A
Sbjct: 91 KLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMA 150
Query: 274 NSIKKIFYMKKAEIEHHE 291
+++K+F K E+ E
Sbjct: 151 EALEKLFLQKINELPTEE 168
Score = 58.2 bits (139), Expect = 6e-08
Identities = 30/74 (40%), Positives = 40/74 (54%)
Query: 552 KKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDA 611
K + PDYYKII PMD+ I+ + N+ Y + I+D MF N YN+ G + A
Sbjct: 91 KLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMA 150
Query: 612 HILEKLLKEKRKEL 625
LEKL +K EL
Sbjct: 151 EALEKLFLQKINEL 164
Score = 55.1 bits (131), Expect = 5e-07
Identities = 29/75 (38%), Positives = 39/75 (52%)
Query: 693 LPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVL 752
LPDYY IK PMDM I+ + N Y + ++DF MF N YN+P I A L
Sbjct: 94 LPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEAL 153
Query: 753 HKVLLETRRDLEGDE 767
K+ L+ +L +E
Sbjct: 154 EKLFLQKINELPTEE 168
Score = 50.1 bits (118), Expect = 2e-05
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 4/105 (3%)
Query: 219 DYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIKK 278
DY IIK P+D+ TI +++ Y+ D+ L+ N YN P +V A ++
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448
Query: 279 IFYMKKA----EIEHHEMAKSSLRMRTPSNLAAARLTGPSHSKGS 319
+F M+ A E E +A SS + P+ + A + S S S
Sbjct: 449 VFEMRFAKMPDEPEEPVVAVSSPAVPPPTKVVAPPSSSDSSSDSS 493
Score = 48.5 bits (114), Expect = 5e-05
Identities = 61/243 (25%), Positives = 98/243 (40%), Gaps = 68/243 (27%)
Query: 693 LPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDALVL 752
L DY IK PMDM I+S + A +Y+D D +MF+N YN P+
Sbjct: 387 LHDYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPD---------- 436
Query: 753 HKVLLETRRDLEGDEDSHVPNVTLLIQELIHNLFVSVMSHQDDEGRCYSDSLAEIPAVDP 812
H+V+ R+ +Q++ F + ++ S PAV P
Sbjct: 437 HEVVAMARK----------------LQDVFEMRFAKMPDEPEEPVVAVSS-----PAVPP 475
Query: 813 NFPNK---PPLTFDIIRKNVENNRYRRLDLFQEHMFEVLERARRMNRTDSEIYEDAVELQ 869
P K PP + D + ++ D + ERA+R+ ELQ
Sbjct: 476 --PTKVVAPPSSSDSSSDSSSDSDSSTDDSEE-------ERAQRL-----------AELQ 515
Query: 870 QFFIKIRDELCKNGEILLSPALSYTTKHLHNDVEKERKEKLPKEIEEDKLKREEEKREAE 929
+ + ++L ALS ++ EK++KEK +++K KR+EE E +
Sbjct: 516 EQLKAVHEQLA---------ALSQPQQNKPKKKEKDKKEK-----KKEKHKRKEEVEENK 561
Query: 930 KSE 932
KS+
Sbjct: 562 KSK 564
Score = 48.1 bits (113), Expect = 7e-05
Identities = 22/62 (35%), Positives = 34/62 (54%)
Query: 83 DYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLWD 142
DY +++ P+D+ I+ KL+ EY D AD +L+F+N Y PD A KL D
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448
Query: 143 LY 144
++
Sbjct: 449 VF 450
Score = 47.8 bits (112), Expect = 9e-05
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 419 DYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQQ 478
DY IK P+ + I++KL+ +EY D+ LMF N +YN P+ + KLQ
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448
Query: 479 VMQAK 483
V + +
Sbjct: 449 VFEMR 453
Score = 46.2 bits (108), Expect = 2e-04
Identities = 33/104 (31%), Positives = 46/104 (44%), Gaps = 10/104 (9%)
Query: 414 KKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRV 473
K PDYY+ IK P+ + I+ +L+N Y D N MF N YN P I
Sbjct: 91 KLNLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMA 150
Query: 474 LKLQQVMQAKKKELARRDDIEDGDSMISSA------TSDTGSAK 511
L+++ K EL E+ + MI A +TG+AK
Sbjct: 151 EALEKLFLQKINEL----PTEETEIMIVQAKGRGRGRKETGTAK 190
Score = 44.3 bits (103), Expect = 0.001
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 80 NQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACK 139
N PDYY+++ P+D+ I+++L+ Y + DF +F N Y KP A
Sbjct: 93 NLPDYYKIIKTPMDMGTIKKRLENNYYWNAQECIQDFNTMFTNCYIYNKPGDDIVLMAEA 152
Query: 140 LWDLYLRTRNE 150
L L+L+ NE
Sbjct: 153 LEKLFLQKINE 163
Score = 37.7 bits (86), Expect = 0.089
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 557 DYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDAHILEK 616
DY II PMD+ I+ + +Y + D++LMF N YN +V A L+
Sbjct: 389 DYCDIIKHPMDMSTIKSKLEAREYRDAQEFGADVRLMFSNCYKYNPPDHEVVAMARKLQD 448
Query: 617 LLKEKRKELGPLPDDDDMA--SPKLKLSRKSGISPKKS 652
+ + + ++ P++ +A SP + K P S
Sbjct: 449 VFEMRFAKMPDEPEEPVVAVSSPAVPPPTKVVAPPSSS 486
Score = 36.6 bits (83), Expect = 0.20
Identities = 47/201 (23%), Positives = 76/201 (37%), Gaps = 32/201 (15%)
Query: 1299 KEPSPLLEKKIQLLEAKFAELEGGDDDIEEMGEEDSEVIEPPSLPQLQTPLASELDLMPY 1358
K P L + + +++++ L+ + D E+ D E ++P +L +L+ + S L
Sbjct: 624 KLPGEKLGRVVHIIQSREPSLKNSNPDEIEI---DFETLKPSTLRELERYVTSCLR---- 676
Query: 1359 TPPQSTPKSAKGSAKKEGSKRKINMSGYILFSSEMRAVIKAQHPDYSFGELSRLVGTEWR 1418
+ P++ K SK M G+ SE + + + S E++ +
Sbjct: 677 --KKRKPQAEKVDVIAGSSK----MKGFSSSESESSSESSSSDSEDSETEMAPKSKKKGH 730
Query: 1419 NLETAKKAEYEGVMNQGVAPMVGTPAPGGSPYGQQVGVLGPPGQQAPPP-------YPGP 1471
KK + AP P P P PP QQ PPP P P
Sbjct: 731 PGREQKKHHHHHHQQMQQAP---APVPQQPP---------PPPQQPPPPPPPQQQQQPPP 778
Query: 1472 HPAGPPVIQQPTTPMFVAPPP 1492
P P + QQ M +PPP
Sbjct: 779 PPPPPSMPQQAAPAMKSSPPP 799
Score = 33.1 bits (74), Expect = 2.2
Identities = 24/72 (33%), Positives = 30/72 (41%), Gaps = 3/72 (4%)
Query: 1431 VMNQGVAPMVGTPAPGGSPYGQQVGVLGPPGQQAPPPYPGPHPAGPPVIQQP---TTPMF 1487
V +Q P+ P P QQ PP Q PPP P PV QP +T +
Sbjct: 950 VQSQPPPPLPPPPHPSVQQQLQQQPPPPPPPQPQPPPQQQHQPPPRPVHLQPMQFSTHIQ 1009
Query: 1488 VAPPPKTQRLLH 1499
PPP+ Q+ H
Sbjct: 1010 QPPPPQGQQPPH 1021
>gi|153791535 general control of amino acid synthesis 5-like 2 [Homo
sapiens]
Length = 837
Score = 59.3 bits (142), Expect = 3e-08
Identities = 27/79 (34%), Positives = 46/79 (58%)
Query: 208 FQKLPSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGS 267
F + K + PDYY +I+ PIDLKT+ +R+++ Y + D+ + N + YN P S
Sbjct: 753 FMEPVKKSEAPDYYEVIRFPIDLKTMTERLRSRYYVTRKLFVADLQRVIANCREYNPPDS 812
Query: 268 QVFKDANSIKKIFYMKKAE 286
+ + A++++K FY K E
Sbjct: 813 EYCRCASALEKFFYFKLKE 831
Score = 58.5 bits (140), Expect = 5e-08
Identities = 50/196 (25%), Positives = 83/196 (42%), Gaps = 14/196 (7%)
Query: 440 QEYETLDHLECDLN--LMFENAKRYNVPNSAIYKRVLKLQQVMQAKK-------KELARR 490
++YE +EC+LN + + I K++++ +Q K KE R+
Sbjct: 643 KDYEGATLMECELNPRIPYTELSHIIKKQKEIIKKLIERKQAQIRKVYPGLSCFKEGVRQ 702
Query: 491 DDIEDGDSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGRRLCDLFMVKP 550
+E + + G K K K+ Q L N++ + + S FM
Sbjct: 703 IPVESVPGIRETGWKPLGKEKGKELKD-PDQLYTTLKNLLAQIKSHPSAWP----FMEPV 757
Query: 551 SKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYND 610
K + PDYY++I P+DLK + +R+ Y + + D++ + N R YN S+
Sbjct: 758 KKSEAPDYYEVIRFPIDLKTMTERLRSRYYVTRKLFVADLQRVIANCREYNPPDSEYCRC 817
Query: 611 AHILEKLLKEKRKELG 626
A LEK K KE G
Sbjct: 818 ASALEKFFYFKLKEGG 833
Score = 50.4 bits (119), Expect = 1e-05
Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 1/100 (1%)
Query: 388 QLYDTVRSCRNN-QGQLIAEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLD 446
QLY T+++ + A PF K + PDYY+ I+ PI L+ + +L+++ Y T
Sbjct: 732 QLYTTLKNLLAQIKSHPSAWPFMEPVKKSEAPDYYEVIRFPIDLKTMTERLRSRYYVTRK 791
Query: 447 HLECDLNLMFENAKRYNVPNSAIYKRVLKLQQVMQAKKKE 486
DL + N + YN P+S + L++ K KE
Sbjct: 792 LFVADLQRVIANCREYNPPDSEYCRCASALEKFFYFKLKE 831
Score = 50.1 bits (118), Expect = 2e-05
Identities = 25/69 (36%), Positives = 35/69 (50%)
Query: 72 FIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDS 131
F+ K+ PDYYEV+ PIDL + ++L+ Y L AD Q + N + Y PDS
Sbjct: 753 FMEPVKKSEAPDYYEVIRFPIDLKTMTERLRSRYYVTRKLFVADLQRVIANCREYNPPDS 812
Query: 132 PEYKAACKL 140
+ A L
Sbjct: 813 EYCRCASAL 821
Score = 40.4 bits (93), Expect = 0.014
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 1/93 (1%)
Query: 663 NEVYEAVKNYTDKRGRRLSAI-FLRLPSRSELPDYYLTIKKPMDMEKIRSHMMANKYQDI 721
+++Y +KN + SA F+ +SE PDYY I+ P+D++ + + + Y
Sbjct: 731 DQLYTTLKNLLAQIKSHPSAWPFMEPVKKSEAPDYYEVIRFPIDLKTMTERLRSRYYVTR 790
Query: 722 DSMVEDFVMMFNNACTYNEPESLIYKDALVLHK 754
V D + N YN P+S + A L K
Sbjct: 791 KLFVADLQRVIANCREYNPPDSEYCRCASALEK 823
>gi|153791630 bromodomain and WD repeat domain containing 3 [Homo
sapiens]
Length = 1802
Score = 58.9 bits (141), Expect = 4e-08
Identities = 69/301 (22%), Positives = 123/301 (40%), Gaps = 71/301 (23%)
Query: 82 PDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKLW 141
P Y VV+ P DL I+++L+ Y ++ L + + + +NA+++ +PDSP KAA +
Sbjct: 1176 PLYCTVVAYPTDLNTIRRRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIVT 1235
Query: 142 DLYLR------------TRNEFVQKGEADDEDDDEDGQ----DNQGTVTEGS-------- 177
D+ LR T N+ ++ E + D +ED + D+ G T
Sbjct: 1236 DVLLRFIGDQSCTDILDTYNK-IKAEERNSTDAEEDTEIVDLDSDGPGTSSGRKVKCRGR 1294
Query: 178 ------SPAYLKEILEQLLEAIVVATNPSGRLISELFQKLPSKVQYP------------- 218
+P K+ ++LL I R SE F++ + YP
Sbjct: 1295 RQSLKCNPDAWKKQCKELLSLIY------EREDSEPFRQPADLLSYPGHQEQEGESSESV 1348
Query: 219 ------------DYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTY-NEP 265
DY +I P+D T+ + ++ G+Y S KD+ + N+K Y +
Sbjct: 1349 VPERQQDSSLSEDYQDVIDTPVDFSTVKETLEAGNYGSPLEFYKDVRQIFNNSKAYTSNK 1408
Query: 266 GSQVFK--------DANSIKKIFYMKKAEIEHHEMAKSSLRMRTPSNLAAARLTGPSHSK 317
S+++ + IK I K+ I+ + + R R S+ ++ +G K
Sbjct: 1409 KSRIYSMMLRLSALFESHIKNIISEYKSAIQSQKRRRPRYRKRLRSSSSSLSSSGAPSPK 1468
Query: 318 G 318
G
Sbjct: 1469 G 1469
Score = 55.8 bits (133), Expect = 3e-07
Identities = 73/331 (22%), Positives = 129/331 (38%), Gaps = 61/331 (18%)
Query: 217 YPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
YP Y ++ P DL TI +R++N Y+ I A+ ++ + NA+T+NEP S + K A +
Sbjct: 1175 YPLYCTVVAYPTDLNTIRRRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAKIV 1234
Query: 277 KKIFYMKKAE------IEHHEMAKSSLRMRT----PSNLAAARLTGPSHSKGSLGEERNP 326
+ + ++ + K+ R T + + GP S G
Sbjct: 1235 TDVLLRFIGDQSCTDILDTYNKIKAEERNSTDAEEDTEIVDLDSDGPGTSSG-------- 1286
Query: 327 TSKYYRNKRAVQGGRLSAITMALQYGSESEEDAALAAARYEEGESEAESITSFMDVSNPF 386
K +G R S + + +E L + YE +SE PF
Sbjct: 1287 ------RKVKCRGRRQSLKCNPDAWKKQCKE---LLSLIYEREDSE------------PF 1325
Query: 387 YQLYDTVRSCRNNQGQLIAEPFYHLPSKKK----YPDYYQQIKMPISLQQIRTKLKNQEY 442
Q D + S +Q Q +P +++ DY I P+ ++ L+ Y
Sbjct: 1326 RQPADLL-SYPGHQEQEGESSESVVPERQQDSSLSEDYQDVIDTPVDFSTVKETLEAGNY 1384
Query: 443 ETLDHLECDLNLMFENAKRY-NVPNSAIYKRVLKL---------------QQVMQAKKKE 486
+ D+ +F N+K Y + S IY +L+L + +Q++K+
Sbjct: 1385 GSPLEFYKDVRQIFNNSKAYTSNKKSRIYSMMLRLSALFESHIKNIISEYKSAIQSQKRR 1444
Query: 487 LAR-RDDIEDGDSMISSATSDTGSAKRKSKK 516
R R + S +SS+ + + K+K K
Sbjct: 1445 RPRYRKRLRSSSSSLSSSGAPSPKGKQKQMK 1475
Score = 50.8 bits (120), Expect = 1e-05
Identities = 56/268 (20%), Positives = 102/268 (38%), Gaps = 47/268 (17%)
Query: 405 AEPFYHLPSKKKYPDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNV 464
A PF YP Y + P L IR +L+N+ Y + L ++ + NA+ +N
Sbjct: 1163 ASPFAVPVDLSAYPLYCTVVAYPTDLNTIRRRLENRFYRRISALMWEVRYIEHNARTFNE 1222
Query: 465 PNSAIYKRVLKLQQVM-----------------QAKKKELARRDDIEDGDSMISSATSDT 507
P+S I K + V+ + K +E D ED + + +
Sbjct: 1223 PDSPIVKAAKIVTDVLLRFIGDQSCTDILDTYNKIKAEERNSTDAEEDTEIVDLDSDGPG 1282
Query: 508 GSAKRKSKKNIRKQRMKI-----------LFNVVLEAREPGSGRRLCDLF---------- 546
S+ RK K R+Q +K L +++ E + R+ DL
Sbjct: 1283 TSSGRKVKCRGRRQSLKCNPDAWKKQCKELLSLIYEREDSEPFRQPADLLSYPGHQEQEG 1342
Query: 547 ----MVKPSKKD----YPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNAR 598
V P ++ DY +I P+D ++ + Y +D++ +F N++
Sbjct: 1343 ESSESVVPERQQDSSLSEDYQDVIDTPVDFSTVKETLEAGNYGSPLEFYKDVRQIFNNSK 1402
Query: 599 HY-NEEGSQVYNDAHILEKLLKEKRKEL 625
Y + + S++Y+ L L + K +
Sbjct: 1403 AYTSNKKSRIYSMMLRLSALFESHIKNI 1430
Score = 38.9 bits (89), Expect = 0.040
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 691 SELPDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDAL 750
S P Y + P D+ IR + Y+ I +++ + + +NA T+NEP+S I K A
Sbjct: 1173 SAYPLYCTVVAYPTDLNTIRRRLENRFYRRISALMWEVRYIEHNARTFNEPDSPIVKAAK 1232
Query: 751 VLHKVLL 757
++ VLL
Sbjct: 1233 IVTDVLL 1239
>gi|41350212 bromodomain containing 7 [Homo sapiens]
Length = 651
Score = 58.5 bits (140), Expect = 5e-08
Identities = 36/121 (29%), Positives = 64/121 (52%), Gaps = 12/121 (9%)
Query: 645 SGISPKKSKYMTPMQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSEL-PDYYLTIKKP 703
S ++ ++ TP+Q+ LN++ ++ R+ + F P + P Y + IK P
Sbjct: 123 SSLAKQEEVEQTPLQEALNQLMRQLQ-------RKDPSAFFSFPVTDFIAPGYSMIIKHP 175
Query: 704 MDMEKIRSHMMANKYQDIDSMVEDFVMMFNNACTYNEPESLIYKDA-LVLH---KVLLET 759
MD ++ + N YQ I+ + ++F +M NA YN+PE++ YK A +LH K+L +
Sbjct: 176 MDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLLHSGMKILSQE 235
Query: 760 R 760
R
Sbjct: 236 R 236
Score = 48.5 bits (114), Expect = 5e-05
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 218 PDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSIK 277
P Y IIK P+D T+ ++I+N Y+SI + + L+ NA YN+P + +K A K
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAA---K 222
Query: 278 KIFY--MKKAEIEHHEMAKSSL 297
K+ + MK E + K S+
Sbjct: 223 KLLHSGMKILSQERIQSLKQSI 244
Score = 47.4 bits (111), Expect = 1e-04
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 82 PDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYKAACKL 140
P Y ++ P+D +++K+K +Y + L +F+L+ NA Y KP++ YKAA KL
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKL 224
Score = 46.2 bits (108), Expect = 2e-04
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 418 PDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKL 476
P Y IK P+ ++ K+KN +Y++++ L+ + LM NA YN P + YK KL
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKL 224
Score = 40.4 bits (93), Expect = 0.014
Identities = 24/71 (33%), Positives = 36/71 (50%), Gaps = 4/71 (5%)
Query: 556 PDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDA---- 611
P Y II PMD ++ I+N+ Y E + ++ KLM NA YN+ + Y A
Sbjct: 166 PGYSMIIKHPMDFSTMKEKIKNNDYQSIEELKDNFKLMCTNAMIYNKPETIYYKAAKKLL 225
Query: 612 HILEKLLKEKR 622
H K+L ++R
Sbjct: 226 HSGMKILSQER 236
>gi|237649104 bromodomain containing 9 isoform 1 [Homo sapiens]
Length = 597
Score = 58.2 bits (139), Expect = 6e-08
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 4/161 (2%)
Query: 615 EKLLKEKRKELGPLPDDDDMASPKLKLSRKSGISPKKSKYMTPMQQKLNEVYEAVKNYTD 674
EK K +R+ + DD K P ++ P + + + + ++++
Sbjct: 91 EKKRKREREHCDTEGEADDFDPGKKVEVEPPPDRPVRACRTQPAENESTPIQQLLEHFLR 150
Query: 675 KRGRRLSAIFLRLPSRSEL-PDYYLTIKKPMDMEKIRSHMMANKYQDIDSMVEDFVMMFN 733
+ R+ F P + P Y + IK PMD ++ ++AN+Y+ + DF +M +
Sbjct: 151 QLQRKDPHGFFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCD 210
Query: 734 NACTYNEPESLIYKDA-LVLHK--VLLETRRDLEGDEDSHV 771
NA TYN P+++ YK A +LH ++ + L G+ED+ V
Sbjct: 211 NAMTYNRPDTVYYKLAKKILHAGFKMMSKQAALLGNEDTAV 251
Score = 53.5 bits (127), Expect = 2e-06
Identities = 40/140 (28%), Positives = 57/140 (40%), Gaps = 8/140 (5%)
Query: 4 KRRRATSPSSSVSGDFDDGHHSVSTPGPSRKRRRLSNLPTVD---PIAVCHELYNTIRDY 60
KR R + + DFD G P P R R P + PI E +
Sbjct: 95 KREREHCDTEGEADDFDPGKKVEVEPPPDRPVRACRTQPAENESTPIQQLLEHFLRQLQR 154
Query: 61 KDEQGRLLCELFIRAPKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLF 120
KD G F P Y ++ P+D ++ K+ EY V ADF+L+
Sbjct: 155 KDPHG-----FFAFPVTDAIAPGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMC 209
Query: 121 NNAKSYYKPDSPEYKAACKL 140
+NA +Y +PD+ YK A K+
Sbjct: 210 DNAMTYNRPDTVYYKLAKKI 229
Score = 46.6 bits (109), Expect = 2e-04
Identities = 23/59 (38%), Positives = 30/59 (50%)
Query: 218 PDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEPGSQVFKDANSI 276
P Y IIK P+D T+ +I YKS+ D L+ NA TYN P + +K A I
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKI 229
Score = 44.3 bits (103), Expect = 0.001
Identities = 30/106 (28%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 418 PDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQ 477
P Y IK P+ ++ K+ EY+++ + D LM +NA YN P++ YK K+
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKIL 230
Query: 478 QV---MQAKKKELARRDDIEDGDSMISSATSDTGSAKRKSKKNIRK 520
M +K+ L +D + + +AK KSKK R+
Sbjct: 231 HAGFKMMSKQAALLGNEDTAVEEPVPEVVPVQVETAK-KSKKPSRE 275
Score = 33.1 bits (74), Expect = 2.2
Identities = 25/78 (32%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
Query: 556 PDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNEEGSQVYNDA-HIL 614
P Y II PMD ++ I ++Y D KLM NA YN + Y A IL
Sbjct: 171 PGYSMIIKHPMDFGTMKDKIVANEYKSVTEFKADFKLMCDNAMTYNRPDTVYYKLAKKIL 230
Query: 615 EKLLKEKRKELGPLPDDD 632
K K+ L ++D
Sbjct: 231 HAGFKMMSKQAALLGNED 248
>gi|119943102 CREB binding protein isoform b [Homo sapiens]
Length = 2404
Score = 58.2 bits (139), Expect = 6e-08
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 7/135 (5%)
Query: 153 QKGEADDEDDDEDGQDNQGTVTEGSSPAYLKEIL---EQLLEAIVVATNPSGRLISELFQ 209
+K E E +E+ + GT ++ +SP+ ++ + E+L +A++ R E
Sbjct: 1013 KKPEVKVEVKEEEESSSNGTASQSTSPSQPRKKIFKPEELRQALMPTLEALYRQDPESLP 1072
Query: 210 KL----PSKVQYPDYYAIIKEPIDLKTIAQRIQNGSYKSIHAMAKDIDLLAKNAKTYNEP 265
P + PDY+ I+K P+DL TI +++ G Y+ D+ L+ NA YN
Sbjct: 1073 FRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRK 1132
Query: 266 GSQVFKDANSIKKIF 280
S+V+K + + ++F
Sbjct: 1133 TSRVYKFCSKLAEVF 1147
Score = 54.3 bits (129), Expect = 9e-07
Identities = 39/146 (26%), Positives = 65/146 (44%), Gaps = 3/146 (2%)
Query: 483 KKKELARRDDIEDGDSMISSATSDTGSAKRKSKKNIRKQRMKILFNVVLEAREPGSGRRL 542
+KK + + E+ +S + S + S + KK + + ++ LEA L
Sbjct: 1012 EKKPEVKVEVKEEEESSSNGTASQSTSPSQPRKKIFKPEELRQALMPTLEALYRQDPESL 1071
Query: 543 CDLFMVKPSKKDYPDYYKIILEPMDLKIIEHNIRNDKYAGEEGMIEDMKLMFRNARHYNE 602
V P PDY+ I+ PMDL I+ + +Y ++D+ LMF NA YN
Sbjct: 1072 PFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNR 1131
Query: 603 EGSQVYNDAHILEKLLKEKRKELGPL 628
+ S+VY KL + +E+ P+
Sbjct: 1132 KTSRVYK---FCSKLAEVFEQEIDPV 1154
Score = 52.8 bits (125), Expect = 3e-06
Identities = 42/153 (27%), Positives = 71/153 (46%), Gaps = 16/153 (10%)
Query: 605 SQVYNDAHILEKL-----LKEKRKELGPLPDDDDMASPKLKLSRKSGISPKKSKYMTP-- 657
SQV + I E+ + EK+ E+ +++ +S S+ + S + K P
Sbjct: 992 SQVKEETDIAEQKSEPMEVDEKKPEVKVEVKEEEESSSNGTASQSTSPSQPRKKIFKPEE 1051
Query: 658 MQQKLNEVYEAVKNYTDKRGRRLSAIFLRLPSRSEL---PDYYLTIKKPMDMEKIRSHMM 714
++Q L EA+ + ++ R P +L PDY+ +K PMD+ I+ +
Sbjct: 1052 LRQALMPTLEALYRQDPE------SLPFRQPVDPQLLGIPDYFDIVKNPMDLSTIKRKLD 1105
Query: 715 ANKYQDIDSMVEDFVMMFNNACTYNEPESLIYK 747
+YQ+ V+D +MFNNA YN S +YK
Sbjct: 1106 TGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYK 1138
Score = 47.8 bits (112), Expect = 9e-05
Identities = 24/69 (34%), Positives = 38/69 (55%)
Query: 76 PKRRNQPDYYEVVSQPIDLMKIQQKLKMEEYDDVNLLTADFQLLFNNAKSYYKPDSPEYK 135
P+ PDY+++V P+DL I++KL +Y + D L+FNNA Y + S YK
Sbjct: 1079 PQLLGIPDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYK 1138
Query: 136 AACKLWDLY 144
KL +++
Sbjct: 1139 FCSKLAEVF 1147
Score = 45.1 bits (105), Expect = 6e-04
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 418 PDYYQQIKMPISLQQIRTKLKNQEYETLDHLECDLNLMFENAKRYNVPNSAIYKRVLKLQ 477
PDY+ +K P+ L I+ KL +Y+ D+ LMF NA YN S +YK KL
Sbjct: 1085 PDYFDIVKNPMDLSTIKRKLDTGQYQEPWQYVDDVWLMFNNAWLYNRKTSRVYKFCSKLA 1144
Query: 478 QVMQ 481
+V +
Sbjct: 1145 EVFE 1148
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.387
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 65,452,189
Number of Sequences: 37866
Number of extensions: 3406075
Number of successful extensions: 29753
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 269
Number of HSP's successfully gapped in prelim test: 390
Number of HSP's that attempted gapping in prelim test: 21895
Number of HSP's gapped (non-prelim): 6802
length of query: 1582
length of database: 18,247,518
effective HSP length: 116
effective length of query: 1466
effective length of database: 13,855,062
effective search space: 20311520892
effective search space used: 20311520892
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.