Guide to the Human Genome
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Search of human proteins with 41281725

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|41281725 praja 1 isoform a [Homo sapiens]
         (643 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|41281725 praja 1 isoform a [Homo sapiens]                         1328   0.0  
gi|74048537 praja 1 isoform b [Homo sapiens]                         1213   0.0  
gi|21539663 praja 1 isoform c [Homo sapiens]                          746   0.0  
gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens]         528   e-150
gi|37622894 ring finger protein 126 [Homo sapiens]                     82   2e-15
gi|33859668 Rabring 7 [Homo sapiens]                                   77   6e-14
gi|7706039 ring finger protein 181 [Homo sapiens]                      72   1e-12
gi|5174653 ring finger protein 6 [Homo sapiens]                        59   2e-08
gi|34305295 ring finger protein 6 [Homo sapiens]                       59   2e-08
gi|34305293 ring finger protein 6 [Homo sapiens]                       59   2e-08
gi|34452686 ring finger protein, LIM domain interacting [Homo sa...    56   1e-07
gi|34452684 ring finger protein, LIM domain interacting [Homo sa...    56   1e-07
gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo ...    55   2e-07
gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo ...    55   2e-07
gi|21040269 ring finger protein 133 [Homo sapiens]                     55   3e-07
gi|7662486 ring finger protein 44 [Homo sapiens]                       55   3e-07
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]            54   4e-07
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]            54   4e-07
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]            54   4e-07
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]            54   4e-07
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]            54   4e-07
gi|29788758 ring finger protein 130 [Homo sapiens]                     53   8e-07
gi|150378447 zinc and ring finger 3 [Homo sapiens]                     53   1e-06
gi|37675277 ring finger protein 148 [Homo sapiens]                     52   1e-06
gi|27436927 synoviolin 1 isoform b [Homo sapiens]                      52   2e-06
gi|27436925 synoviolin 1 isoform a [Homo sapiens]                      52   2e-06
gi|14149702 ring finger protein 167 [Homo sapiens]                     52   2e-06
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]           51   4e-06
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]           51   4e-06
gi|58331204 ring finger protein 150 [Homo sapiens]                     51   4e-06

>gi|41281725 praja 1 isoform a [Homo sapiens]
          Length = 643

 Score = 1328 bits (3437), Expect = 0.0
 Identities = 643/643 (100%), Positives = 643/643 (100%)

Query: 1   MGQESSKPVWPNPTGGYQSNTGRRYGRRHAYVSFRPPTSQRERIASQRKTNSEVPMHRSA 60
           MGQESSKPVWPNPTGGYQSNTGRRYGRRHAYVSFRPPTSQRERIASQRKTNSEVPMHRSA
Sbjct: 1   MGQESSKPVWPNPTGGYQSNTGRRYGRRHAYVSFRPPTSQRERIASQRKTNSEVPMHRSA 60

Query: 61  PSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAYGHIDS 120
           PSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAYGHIDS
Sbjct: 61  PSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAYGHIDS 120

Query: 121 YGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDVREERD 180
           YGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDVREERD
Sbjct: 121 YGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDVREERD 180

Query: 181 KLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSRAPVSI 240
           KLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSRAPVSI
Sbjct: 181 KLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSRAPVSI 240

Query: 241 CGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTANDNEGH 300
           CGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTANDNEGH
Sbjct: 241 CGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTANDNEGH 300

Query: 301 SDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSDDYYKY 360
           SDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSDDYYKY
Sbjct: 301 SDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSDDYYKY 360

Query: 361 CDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGTSPGPG 420
           CDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGTSPGPG
Sbjct: 361 CDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGTSPGPG 420

Query: 421 ASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEGDNDSG 480
           ASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEGDNDSG
Sbjct: 421 ASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEGDNDSG 480

Query: 481 HELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFLTYMAL 540
           HELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFLTYMAL
Sbjct: 481 HELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFLTYMAL 540

Query: 541 EERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCS 600
           EERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCS
Sbjct: 541 EERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCS 600

Query: 601 EYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL 643
           EYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL
Sbjct: 601 EYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL 643


>gi|74048537 praja 1 isoform b [Homo sapiens]
          Length = 588

 Score = 1213 bits (3139), Expect = 0.0
 Identities = 588/588 (100%), Positives = 588/588 (100%)

Query: 56  MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAY 115
           MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAY
Sbjct: 1   MHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAY 60

Query: 116 GHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDV 175
           GHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDV
Sbjct: 61  GHIDSYGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDV 120

Query: 176 REERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSR 235
           REERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSR
Sbjct: 121 REERDKLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSR 180

Query: 236 APVSICGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTAN 295
           APVSICGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTAN
Sbjct: 181 APVSICGGGENTSKSAEEPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTAN 240

Query: 296 DNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSD 355
           DNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSD
Sbjct: 241 DNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSD 300

Query: 356 DYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGT 415
           DYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGT
Sbjct: 301 DYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGT 360

Query: 416 SPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEG 475
           SPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEG
Sbjct: 361 SPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDSSSEG 420

Query: 476 DNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFL 535
           DNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFL
Sbjct: 421 DNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFL 480

Query: 536 TYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCC 595
           TYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCC
Sbjct: 481 TYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCC 540

Query: 596 PICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL 643
           PICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL
Sbjct: 541 PICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPPPL 588


>gi|21539663 praja 1 isoform c [Homo sapiens]
          Length = 455

 Score =  746 bits (1926), Expect = 0.0
 Identities = 359/364 (98%), Positives = 361/364 (99%)

Query: 280 DDDMPHSTSRWRDTANDNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVP 339
           D++   STSRWRDTANDNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVP
Sbjct: 92  DNEDYSSTSRWRDTANDNEGHSDGLARRGRGESSSGYPEPKYPEDKREARSDQVKPEKVP 151

Query: 340 RRRRTMADPDFWTHSDDYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGK 399
           RRRRTMADPDFWTHSDDYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGK
Sbjct: 152 RRRRTMADPDFWTHSDDYYKYCDEDSDSDKEWIAALRRKYRSREQTLSSSGESWETLPGK 211

Query: 400 EEREPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEG 459
           EEREPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEG
Sbjct: 212 EEREPPQAKVSASTGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEG 271

Query: 460 EIPWLQYHENDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFAD 519
           EIPWLQYHENDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFAD
Sbjct: 272 EIPWLQYHENDSSSEGDNDSGHELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFAD 331

Query: 520 GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPE 579
           GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPE
Sbjct: 332 GLGVAEAISYVDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPE 391

Query: 580 ILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMF 639
           ILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMF
Sbjct: 392 ILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMF 451

Query: 640 PPPL 643
           PPPL
Sbjct: 452 PPPL 455



 Score =  207 bits (527), Expect = 2e-53
 Identities = 128/251 (50%), Positives = 147/251 (58%), Gaps = 12/251 (4%)

Query: 1   MGQESSKPVWPNPTGGYQSNTGRRYGRRHAYVSFRPPTSQRERIASQRKTNSEVPMHRSA 60
           MGQESSKPVWPNPTGGYQSNTGRRYGRRHAYVSFRPPTSQRERIASQRKTNSEVPMHRSA
Sbjct: 1   MGQESSKPVWPNPTGGYQSNTGRRYGRRHAYVSFRPPTSQRERIASQRKTNSEVPMHRSA 60

Query: 61  PSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRYPPREYRASGSRRGMAYGHIDS 120
           PSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYS        A+ +      GH D 
Sbjct: 61  PSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSSTSRWRDTANDNE-----GHSDG 115

Query: 121 YGADDSEEEGAGPVERPPVRGKTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDVREERD 180
                  E  +G  E P       + + D++   +   R      P F + S D  +  D
Sbjct: 116 LARRGRGESSSGYPE-PKYPEDKREARSDQVKPEKVPRRRRTMADPDFWTHSDDYYKYCD 174

Query: 181 KLDPVPAARCSASRADFLPQSSVASQSSSEGKLATKGDSSERERREQNLPARPSRAPVSI 240
           +         +A R  +  +S   + SSS     T     ERE  +  + A    +P   
Sbjct: 175 EDSDSDKEWIAALRRKY--RSREQTLSSSGESWETLPGKEEREPPQAKVSASTGTSP--- 229

Query: 241 CGGGENTSKSA 251
            G G + S  A
Sbjct: 230 -GPGASASAGA 239


>gi|157412255 praja 2, RING-H2 motif containing [Homo sapiens]
          Length = 708

 Score =  528 bits (1361), Expect = e-150
 Identities = 316/700 (45%), Positives = 404/700 (57%), Gaps = 90/700 (12%)

Query: 1   MGQESSKPVWPNPTGGYQSNTGRRYGRRHAYVSFRPPTSQRERIASQ------------- 47
           M QES K VWP P GGYQ+ TGRRYGRRHAYVSF+P  ++ ER   +             
Sbjct: 12  MDQESGKAVWPKPAGGYQTITGRRYGRRHAYVSFKPCMTRHERSLGRAGDDYEVLELDDV 71

Query: 48  ------------------------RKTNSEVPMHRSAPSQTTKRSRSPFSTTRRSWDDSE 83
                                    K+ +E+P   SA +QTT+ S+S F     S +  +
Sbjct: 72  PKENSSGSSPLDQVDSSLPSEPIFEKSETEIPTCGSALNQTTESSQS-FVAVHHSEEGRD 130

Query: 84  SSGTNLNIDNEDYSRYPPREYRASGSRRGMAYGHIDSYGADDSEEEGAGPVERPPVRGKT 143
           + G++ N+ N     Y P    AS  + G+A  H DSY  D    E    ++      + 
Sbjct: 131 TLGSSTNLHNHSEGEYIPGACSASSVQNGIALVHTDSYDPDGKHGEDNDHLQLSAEVVEG 190

Query: 144 GKFKD---DKLYDPE-KGARSLAGPPPHFSSFSRDVREERDKLDPVPAARCSASRADFLP 199
            ++++   + +++ E + A +  G  P   SF+ +VR+E ++LD VP  + SA   +F+ 
Sbjct: 191 SRYQESLGNTVFELENREAEAYTGLSPPVPSFNCEVRDEFEELDSVPLVKSSAGDTEFVH 250

Query: 200 QSSVASQSSSEGKLAT--KGDSSERERREQNLPARPSRAPVSICG-----GGENTSKSAE 252
           Q+S   Q SS+ ++ +  + +++ +ER+ ++ P   +  P  IC        E    S+ 
Sbjct: 251 QNSQEIQRSSQDEMVSTKQQNNTSQERQTEHSPEDAACGPGHICSEQNTNDREKNHGSSP 310

Query: 253 EPVVRPKIRNLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTANDNEGHSDGLARRGR--- 309
           E VVRPK+R L S + V  +  F+  +      S  RWR+     E  SD L  +     
Sbjct: 311 EQVVRPKVRKLISSSQVDQETGFNRHEAKQ--RSVQRWREALEVEESGSDDLLIKCEEYD 368

Query: 310 GESSSGYPEPKYPE--DKREARSDQVKPEKVPRRRRTMADPDFWTHSDDYYKYCDEDSDS 367
           GE    + +P Y     +RE  ++Q+  E      R   D  FW    DYY+  D+D DS
Sbjct: 369 GEHDCMFLDPPYSRVITQRETENNQMTSESGATAGRQEVDNTFWNGCGDYYQLYDKDEDS 428

Query: 368 ----DKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSASTGTSPGPGASA 423
               D EW A+L  ++   E+  SSS ESWETLPGK+E EP                   
Sbjct: 429 SECSDGEWSASLPHRFSGTEKDQSSSDESWETLPGKDENEP------------------- 469

Query: 424 SAGAGAGASAGSNGSNYLEEVREPSLQE-EQASLEEGEIPWLQYHE-NDSSSEGDNDSGH 481
                      S+ S   EE +E SLQE EQ SLEEGEIPWLQY+E N+SSS+  N+  +
Sbjct: 470 --------ELQSDSSGPEEENQELSLQEGEQTSLEEGEIPWLQYNEVNESSSDEGNEPAN 521

Query: 482 ELMQPGVFMLDGNNNLEDDSSVSEDLEVDWSLFDGFADGLGVAEAISYVDPQFLTYMALE 541
           E  QP  FMLDGNNNLEDDSSVSEDL+VDWSLFDGFADGLGVAEAISYVDPQFLTYMALE
Sbjct: 522 EFAQPA-FMLDGNNNLEDDSSVSEDLDVDWSLFDGFADGLGVAEAISYVDPQFLTYMALE 580

Query: 542 ERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAVGQEMCCPICCSE 601
           ERLAQAMETALAHLESLAVDVEVANPPASKESID LPE LV EDH A+GQE CCPICCSE
Sbjct: 581 ERLAQAMETALAHLESLAVDVEVANPPASKESIDGLPETLVLEDHTAIGQEQCCPICCSE 640

Query: 602 YVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRCMFPP 641
           Y+K ++ATELPCHH+FHKPCVSIWLQKSGTCPVCR  FPP
Sbjct: 641 YIKDDIATELPCHHFFHKPCVSIWLQKSGTCPVCRRHFPP 680


>gi|37622894 ring finger protein 126 [Homo sapiens]
          Length = 311

 Score = 82.0 bits (201), Expect = 2e-15
 Identities = 35/70 (50%), Positives = 46/70 (65%), Gaps = 2/70 (2%)

Query: 567 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 626
           PPA KE I ALP + VTE+H  VG  + CP+C  +Y  GE   +LPC+H FH  C+  WL
Sbjct: 203 PPADKEKIQALPTVPVTEEH--VGSGLECPVCKDDYALGERVRQLPCNHLFHDGCIVPWL 260

Query: 627 QKSGTCPVCR 636
           ++  +CPVCR
Sbjct: 261 EQHDSCPVCR 270


>gi|33859668 Rabring 7 [Homo sapiens]
          Length = 304

 Score = 76.6 bits (187), Expect = 6e-14
 Identities = 32/70 (45%), Positives = 44/70 (62%), Gaps = 2/70 (2%)

Query: 567 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 626
           PPA KE I +LP + VT++   +G E  CP+C  +Y   E   +LPC+H+FH  C+  WL
Sbjct: 202 PPADKEKITSLPTVTVTQEQVDMGLE--CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWL 259

Query: 627 QKSGTCPVCR 636
           +   TCPVCR
Sbjct: 260 ELHDTCPVCR 269


>gi|7706039 ring finger protein 181 [Homo sapiens]
          Length = 153

 Score = 72.4 bits (176), Expect = 1e-12
 Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 4/74 (5%)

Query: 567 PPASKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL 626
           PPA+K  ++ LP  ++         E+ CP+C  E+ + E A E+PCHH FH  C+  WL
Sbjct: 52  PPAAKTVVENLPRTVIRGSQA----ELKCPVCLLEFEEEETAIEMPCHHLFHSSCILPWL 107

Query: 627 QKSGTCPVCRCMFP 640
            K+ +CP+CR   P
Sbjct: 108 SKTNSCPLCRYELP 121


>gi|5174653 ring finger protein 6 [Homo sapiens]
          Length = 685

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 570 SKESIDALPEILVTEDHGAVGQEM--CCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQ 627
           +KE ID L       +H ++  E+   C +C S+YV G    +LPC H FH  C+  WL 
Sbjct: 607 TKEQIDNLSTRHY--EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS 664

Query: 628 KSGTCPVCR 636
           ++ TCP+CR
Sbjct: 665 ENCTCPICR 673


>gi|34305295 ring finger protein 6 [Homo sapiens]
          Length = 685

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 570 SKESIDALPEILVTEDHGAVGQEM--CCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQ 627
           +KE ID L       +H ++  E+   C +C S+YV G    +LPC H FH  C+  WL 
Sbjct: 607 TKEQIDNLSTRHY--EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS 664

Query: 628 KSGTCPVCR 636
           ++ TCP+CR
Sbjct: 665 ENCTCPICR 673


>gi|34305293 ring finger protein 6 [Homo sapiens]
          Length = 685

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 4/69 (5%)

Query: 570 SKESIDALPEILVTEDHGAVGQEM--CCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQ 627
           +KE ID L       +H ++  E+   C +C S+YV G    +LPC H FH  C+  WL 
Sbjct: 607 TKEQIDNLSTRHY--EHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLS 664

Query: 628 KSGTCPVCR 636
           ++ TCP+CR
Sbjct: 665 ENCTCPICR 673


>gi|34452686 ring finger protein, LIM domain interacting [Homo
           sapiens]
          Length = 624

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)

Query: 570 SKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 629
           +KE ID L         G       C +C +EY +G    +LPC H +H  C+  WL ++
Sbjct: 549 TKEQIDNL----AMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSEN 604

Query: 630 GTCPVCR 636
            TCP+CR
Sbjct: 605 STCPICR 611



 Score = 32.7 bits (73), Expect = 1.1
 Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 6/150 (4%)

Query: 357 YYKYCDEDSD-----SDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSA 411
           Y+ Y D DS+     S++    A  R  R      SSSG S  +           +  S 
Sbjct: 418 YFMYSDSDSEPTGSVSNRNMERAESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSSSSSSP 477

Query: 412 STGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDS 471
           S+ +S G  +  S+    G++ GS+ S      RE   +      E G +P+L   +   
Sbjct: 478 SS-SSGGESSETSSDLFEGSNEGSSSSGSSGARREGRHRAPVTFDESGSLPFLSLAQFFL 536

Query: 472 SSEGDNDSGHELMQPGVFMLDGNNNLEDDS 501
            +E D+D    L +  +  L   +  E+D+
Sbjct: 537 LNEDDDDQPRGLTKEQIDNLAMRSFGENDA 566



 Score = 30.8 bits (68), Expect = 4.0
 Identities = 64/293 (21%), Positives = 98/293 (33%), Gaps = 79/293 (26%)

Query: 40  QRERIASQRKTNSEVPMHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRY 99
           QR+ IAS+ ++ S+ P +    + T +  R  F   RR++  SE +G    +      R 
Sbjct: 335 QRDSIASRTRSRSQTPNN----TVTYESERGGF---RRTFSRSERAGVRTYVST---IRI 384

Query: 100 PPREYRASGSRRGMA-------------YGHIDSYGADDSEEEGAGPV-----ERPPVRG 141
           P R    +G     +             +G +  +   DS+ E  G V     ER   R 
Sbjct: 385 PIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFMYSDSDSEPTGSVSNRNMERAESRS 444

Query: 142 KTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDVREERDKLDPVPAARCSASRADFLPQS 201
             G            G  S +G     SS S           P      S+S  +    S
Sbjct: 445 GRG----------GSGGGSSSGSSSSSSSSSSSSSSSSSSSSP-----SSSSGGESSETS 489

Query: 202 SVASQSSSEGKLATKGDSSERERREQNLPARPSRAPVSICGGGENTSKSAEEPVVRPKIR 261
           S   + S+EG  ++    + RE R         RAPV+    G                 
Sbjct: 490 SDLFEGSNEGSSSSGSSGARREGRH--------RAPVTFDESG----------------- 524

Query: 262 NLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTANDNEGHSDGLARRGRGESSS 314
             + P     + F   +DDDD P   ++            D LA R  GE+ +
Sbjct: 525 --SLPFLSLAQFFLLNEDDDDQPRGLTK---------EQIDNLAMRSFGENDA 566


>gi|34452684 ring finger protein, LIM domain interacting [Homo
           sapiens]
          Length = 624

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 24/67 (35%), Positives = 34/67 (50%), Gaps = 4/67 (5%)

Query: 570 SKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 629
           +KE ID L         G       C +C +EY +G    +LPC H +H  C+  WL ++
Sbjct: 549 TKEQIDNL----AMRSFGENDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSEN 604

Query: 630 GTCPVCR 636
            TCP+CR
Sbjct: 605 STCPICR 611



 Score = 32.7 bits (73), Expect = 1.1
 Identities = 36/150 (24%), Positives = 60/150 (40%), Gaps = 6/150 (4%)

Query: 357 YYKYCDEDSD-----SDKEWIAALRRKYRSREQTLSSSGESWETLPGKEEREPPQAKVSA 411
           Y+ Y D DS+     S++    A  R  R      SSSG S  +           +  S 
Sbjct: 418 YFMYSDSDSEPTGSVSNRNMERAESRSGRGGSGGGSSSGSSSSSSSSSSSSSSSSSSSSP 477

Query: 412 STGTSPGPGASASAGAGAGASAGSNGSNYLEEVREPSLQEEQASLEEGEIPWLQYHENDS 471
           S+ +S G  +  S+    G++ GS+ S      RE   +      E G +P+L   +   
Sbjct: 478 SS-SSGGESSETSSDLFEGSNEGSSSSGSSGARREGRHRAPVTFDESGSLPFLSLAQFFL 536

Query: 472 SSEGDNDSGHELMQPGVFMLDGNNNLEDDS 501
            +E D+D    L +  +  L   +  E+D+
Sbjct: 537 LNEDDDDQPRGLTKEQIDNLAMRSFGENDA 566



 Score = 30.8 bits (68), Expect = 4.0
 Identities = 64/293 (21%), Positives = 98/293 (33%), Gaps = 79/293 (26%)

Query: 40  QRERIASQRKTNSEVPMHRSAPSQTTKRSRSPFSTTRRSWDDSESSGTNLNIDNEDYSRY 99
           QR+ IAS+ ++ S+ P +    + T +  R  F   RR++  SE +G    +      R 
Sbjct: 335 QRDSIASRTRSRSQTPNN----TVTYESERGGF---RRTFSRSERAGVRTYVST---IRI 384

Query: 100 PPREYRASGSRRGMA-------------YGHIDSYGADDSEEEGAGPV-----ERPPVRG 141
           P R    +G     +             +G +  +   DS+ E  G V     ER   R 
Sbjct: 385 PIRRILNTGLSETTSVAIQTMLRQIMTGFGELSYFMYSDSDSEPTGSVSNRNMERAESRS 444

Query: 142 KTGKFKDDKLYDPEKGARSLAGPPPHFSSFSRDVREERDKLDPVPAARCSASRADFLPQS 201
             G            G  S +G     SS S           P      S+S  +    S
Sbjct: 445 GRG----------GSGGGSSSGSSSSSSSSSSSSSSSSSSSSP-----SSSSGGESSETS 489

Query: 202 SVASQSSSEGKLATKGDSSERERREQNLPARPSRAPVSICGGGENTSKSAEEPVVRPKIR 261
           S   + S+EG  ++    + RE R         RAPV+    G                 
Sbjct: 490 SDLFEGSNEGSSSSGSSGARREGRH--------RAPVTFDESG----------------- 524

Query: 262 NLASPNCVKPKIFFDTDDDDDMPHSTSRWRDTANDNEGHSDGLARRGRGESSS 314
             + P     + F   +DDDD P   ++            D LA R  GE+ +
Sbjct: 525 --SLPFLSLAQFFLLNEDDDDQPRGLTK---------EQIDNLAMRSFGENDA 566


>gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo
           sapiens]
          Length = 183

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 574 IDALPEILVTEDHGAVGQEMC-CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTC 632
           +  LPE +         +EM  C IC  E+V G+    LPC H+FH  C+  WL +S TC
Sbjct: 66  LQCLPEEVYDPGRDKSEEEMPECVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTC 125

Query: 633 PVCR 636
           P CR
Sbjct: 126 PYCR 129


>gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo
           sapiens]
          Length = 183

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 26/64 (40%), Positives = 34/64 (53%), Gaps = 1/64 (1%)

Query: 574 IDALPEILVTEDHGAVGQEMC-CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTC 632
           +  LPE +         +EM  C IC  E+V G+    LPC H+FH  C+  WL +S TC
Sbjct: 66  LQCLPEEVYDPGRDKSEEEMPECVICLLEFVCGDPIRCLPCKHFFHLDCIDTWLLRSFTC 125

Query: 633 PVCR 636
           P CR
Sbjct: 126 PYCR 129


>gi|21040269 ring finger protein 133 [Homo sapiens]
          Length = 376

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 18/43 (41%), Positives = 25/43 (58%)

Query: 595 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRC 637
           C IC   Y   ++   L C H+FHK C+  W+   GTCP+C+C
Sbjct: 256 CVICFERYKPNDIVRILTCKHFFHKNCIDPWILPHGTCPICKC 298


>gi|7662486 ring finger protein 44 [Homo sapiens]
          Length = 432

 Score = 54.7 bits (130), Expect = 3e-07
 Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 1/67 (1%)

Query: 570 SKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 629
           +K  I+ LP      D     Q +C  +C S++   ++   LPC+H FH  CV  WL+ +
Sbjct: 356 TKADIEQLPSYRFNPDSHQSEQTLCV-VCFSDFEARQLLRVLPCNHEFHTKCVDKWLKAN 414

Query: 630 GTCPVCR 636
            TCP+CR
Sbjct: 415 RTCPICR 421


>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
          Length = 432

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)

Query: 530 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAV 589
           V P F   + +E+   +  E  L   E L    E      +K  I+ LP      ++   
Sbjct: 319 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLPSYRFNPNNHQS 375

Query: 590 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 636
            Q +C  +C  ++   ++   LPC+H FH  CV  WL+ + TCP+CR
Sbjct: 376 EQTLCV-VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421


>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
          Length = 432

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)

Query: 530 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAV 589
           V P F   + +E+   +  E  L   E L    E      +K  I+ LP      ++   
Sbjct: 319 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLPSYRFNPNNHQS 375

Query: 590 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 636
            Q +C  +C  ++   ++   LPC+H FH  CV  WL+ + TCP+CR
Sbjct: 376 EQTLCV-VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421


>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
          Length = 465

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)

Query: 530 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAV 589
           V P F   + +E+   +  E  L   E L    E      +K  I+ LP      ++   
Sbjct: 352 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLPSYRFNPNNHQS 408

Query: 590 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 636
            Q +C  +C  ++   ++   LPC+H FH  CV  WL+ + TCP+CR
Sbjct: 409 EQTLCV-VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 454


>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
          Length = 432

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)

Query: 530 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAV 589
           V P F   + +E+   +  E  L   E L    E      +K  I+ LP      ++   
Sbjct: 319 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLPSYRFNPNNHQS 375

Query: 590 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 636
            Q +C  +C  ++   ++   LPC+H FH  CV  WL+ + TCP+CR
Sbjct: 376 EQTLCV-VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 421


>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
          Length = 515

 Score = 53.9 bits (128), Expect = 4e-07
 Identities = 31/107 (28%), Positives = 49/107 (45%), Gaps = 4/107 (3%)

Query: 530 VDPQFLTYMALEERLAQAMETALAHLESLAVDVEVANPPASKESIDALPEILVTEDHGAV 589
           V P F   + +E+   +  E  L   E L    E      +K  I+ LP      ++   
Sbjct: 402 VGPTFSFELDVEDGEVENYEALLNLAERLG---EAKPRGLTKADIEQLPSYRFNPNNHQS 458

Query: 590 GQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 636
            Q +C  +C  ++   ++   LPC+H FH  CV  WL+ + TCP+CR
Sbjct: 459 EQTLCV-VCMCDFESRQLLRVLPCNHEFHAKCVDKWLKANRTCPICR 504


>gi|29788758 ring finger protein 130 [Homo sapiens]
          Length = 419

 Score = 53.1 bits (126), Expect = 8e-07
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 595 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 636
           C +C   Y + +V   LPC H FHK CV  WL +  TCP+C+
Sbjct: 264 CAVCIESYKQNDVVRILPCKHVFHKSCVDPWLSEHCTCPMCK 305


>gi|150378447 zinc and ring finger 3 [Homo sapiens]
          Length = 836

 Score = 52.8 bits (125), Expect = 1e-06
 Identities = 20/42 (47%), Positives = 25/42 (59%)

Query: 595 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 636
           C IC  +Y+ GE    +PC H FH+ CV  WL +  TCP CR
Sbjct: 193 CAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQHHTCPHCR 234


>gi|37675277 ring finger protein 148 [Homo sapiens]
          Length = 305

 Score = 52.4 bits (124), Expect = 1e-06
 Identities = 25/68 (36%), Positives = 34/68 (50%), Gaps = 1/68 (1%)

Query: 571 KESIDALP-EILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKS 629
           K++ID L   +L   D      E  C +C   Y   +V   L C H+FHK C+  WL   
Sbjct: 233 KKAIDQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLLAH 292

Query: 630 GTCPVCRC 637
            TCP+C+C
Sbjct: 293 RTCPMCKC 300


>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
          Length = 617

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 27/62 (43%), Positives = 31/62 (50%), Gaps = 9/62 (14%)

Query: 575 DALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPV 634
           DA PE L   D+        C IC  E V G  A  LPC+H FH  C+  W Q+  TCP 
Sbjct: 278 DATPEELQAMDN-------VCIICREEMVTG--AKRLPCNHIFHTSCLRSWFQRQQTCPT 328

Query: 635 CR 636
           CR
Sbjct: 329 CR 330


>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
          Length = 616

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 27/62 (43%), Positives = 31/62 (50%), Gaps = 9/62 (14%)

Query: 575 DALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPV 634
           DA PE L   D+        C IC  E V G  A  LPC+H FH  C+  W Q+  TCP 
Sbjct: 278 DATPEELQAMDN-------VCIICREEMVTG--AKRLPCNHIFHTSCLRSWFQRQQTCPT 328

Query: 635 CR 636
           CR
Sbjct: 329 CR 330


>gi|14149702 ring finger protein 167 [Homo sapiens]
          Length = 350

 Score = 52.0 bits (123), Expect = 2e-06
 Identities = 26/68 (38%), Positives = 34/68 (50%), Gaps = 5/68 (7%)

Query: 570 SKESIDALPEILVTEDHGAVGQEMCCPICCSEYVKGEVATELPCHHYFHKPCVSIWL-QK 628
           +KE +  +P    T D+    Q   C IC  EY  G+    LPC H +H  CV  WL Q 
Sbjct: 209 TKEQLKQIP----THDYQKGDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPWLTQT 264

Query: 629 SGTCPVCR 636
             TCP+C+
Sbjct: 265 RKTCPICK 272


>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
          Length = 428

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 18/43 (41%), Positives = 25/43 (58%)

Query: 595 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRC 637
           C +C   Y   ++   L C+H FHK CV  WL +  TCP+C+C
Sbjct: 277 CAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKC 319


>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
          Length = 402

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 18/43 (41%), Positives = 25/43 (58%)

Query: 595 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCRC 637
           C +C   Y   ++   L C+H FHK CV  WL +  TCP+C+C
Sbjct: 251 CAVCIELYKPNDLVRILTCNHIFHKTCVDPWLLEHRTCPMCKC 293


>gi|58331204 ring finger protein 150 [Homo sapiens]
          Length = 438

 Score = 50.8 bits (120), Expect = 4e-06
 Identities = 19/42 (45%), Positives = 23/42 (54%)

Query: 595 CPICCSEYVKGEVATELPCHHYFHKPCVSIWLQKSGTCPVCR 636
           C +C   Y   +V   LPC H FHK CV  WL    TCP+C+
Sbjct: 278 CAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLLDHRTCPMCK 319


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.128    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,249,529
Number of Sequences: 37866
Number of extensions: 1588249
Number of successful extensions: 9140
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 333
Number of HSP's that attempted gapping in prelim test: 8199
Number of HSP's gapped (non-prelim): 1078
length of query: 643
length of database: 18,247,518
effective HSP length: 109
effective length of query: 534
effective length of database: 14,120,124
effective search space: 7540146216
effective search space used: 7540146216
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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