BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|41146634 PREDICTED: hypothetical protein [Homo sapiens] (199 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|169165712 PREDICTED: hypothetical protein [Homo sapiens] 427 e-120 gi|88971283 PREDICTED: hypothetical protein [Homo sapiens] 427 e-120 gi|41146634 PREDICTED: hypothetical protein [Homo sapiens] 427 e-120 gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens] 60 1e-09 gi|239757749 PREDICTED: hypothetical protein [Homo sapiens] 39 0.003 gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens] 39 0.003 gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens] 39 0.003 gi|239746769 PREDICTED: similar to Serine/threonine-protein kina... 39 0.003 gi|112789555 ADAM metallopeptidase with thrombospondin type 1 mo... 35 0.032 gi|115334682 SNAP25-interacting protein [Homo sapiens] 35 0.042 gi|157266326 oculocutaneous albinism II [Homo sapiens] 33 0.12 gi|239754368 PREDICTED: hypothetical protein [Homo sapiens] 33 0.12 gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo ... 33 0.12 gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo ... 33 0.12 gi|239757743 PREDICTED: hypothetical protein [Homo sapiens] 32 0.36 gi|169213965 PREDICTED: similar to hCG1645909 [Homo sapiens] 32 0.36 gi|239755867 PREDICTED: hypothetical protein [Homo sapiens] 32 0.36 gi|239753673 PREDICTED: hypothetical protein [Homo sapiens] 32 0.36 gi|239752237 PREDICTED: hypothetical protein XP_002348168 [Homo ... 32 0.36 gi|239751822 PREDICTED: similar to hCG1645909 [Homo sapiens] 32 0.36 gi|239750351 PREDICTED: hypothetical protein XP_002347378 [Homo ... 32 0.36 gi|239746757 PREDICTED: hypothetical protein XP_002343835 [Homo ... 32 0.36 gi|239746313 PREDICTED: similar to hCG1645909 [Homo sapiens] 32 0.36 gi|143770741 glycoprotein VI (platelet) isoform 1 [Homo sapiens] 31 0.61 gi|116734702 homeobox D13 [Homo sapiens] 31 0.61 gi|57529222 basic helix-loop-helix domain containing, class B, 4... 31 0.61 gi|54873602 hypothetical protein LOC220382 [Homo sapiens] 31 0.61 gi|239754611 PREDICTED: hypothetical protein [Homo sapiens] 31 0.79 gi|239749157 PREDICTED: hypothetical protein XP_002346930 [Homo ... 31 0.79 gi|239743220 PREDICTED: hypothetical protein XP_002342806 [Homo ... 31 0.79 >gi|169165712 PREDICTED: hypothetical protein [Homo sapiens] Length = 199 Score = 427 bits (1098), Expect = e-120 Identities = 199/199 (100%), Positives = 199/199 (100%) Query: 1 MAPGLRGLLGHWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSA 60 MAPGLRGLLGHWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSA Sbjct: 1 MAPGLRGLLGHWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSA 60 Query: 61 DRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASA 120 DRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASA Sbjct: 61 DRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASA 120 Query: 121 WAVAGWPPGSALQLRLGMPSVCEEQQVTVVGLAHPCVWAFTHIVKLCKQGCTGSSWYVSY 180 WAVAGWPPGSALQLRLGMPSVCEEQQVTVVGLAHPCVWAFTHIVKLCKQGCTGSSWYVSY Sbjct: 121 WAVAGWPPGSALQLRLGMPSVCEEQQVTVVGLAHPCVWAFTHIVKLCKQGCTGSSWYVSY 180 Query: 181 ERSYRCSGNLFQWKKMLRW 199 ERSYRCSGNLFQWKKMLRW Sbjct: 181 ERSYRCSGNLFQWKKMLRW 199 >gi|88971283 PREDICTED: hypothetical protein [Homo sapiens] Length = 199 Score = 427 bits (1098), Expect = e-120 Identities = 199/199 (100%), Positives = 199/199 (100%) Query: 1 MAPGLRGLLGHWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSA 60 MAPGLRGLLGHWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSA Sbjct: 1 MAPGLRGLLGHWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSA 60 Query: 61 DRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASA 120 DRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASA Sbjct: 61 DRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASA 120 Query: 121 WAVAGWPPGSALQLRLGMPSVCEEQQVTVVGLAHPCVWAFTHIVKLCKQGCTGSSWYVSY 180 WAVAGWPPGSALQLRLGMPSVCEEQQVTVVGLAHPCVWAFTHIVKLCKQGCTGSSWYVSY Sbjct: 121 WAVAGWPPGSALQLRLGMPSVCEEQQVTVVGLAHPCVWAFTHIVKLCKQGCTGSSWYVSY 180 Query: 181 ERSYRCSGNLFQWKKMLRW 199 ERSYRCSGNLFQWKKMLRW Sbjct: 181 ERSYRCSGNLFQWKKMLRW 199 >gi|41146634 PREDICTED: hypothetical protein [Homo sapiens] Length = 199 Score = 427 bits (1098), Expect = e-120 Identities = 199/199 (100%), Positives = 199/199 (100%) Query: 1 MAPGLRGLLGHWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSA 60 MAPGLRGLLGHWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSA Sbjct: 1 MAPGLRGLLGHWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSA 60 Query: 61 DRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASA 120 DRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASA Sbjct: 61 DRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASA 120 Query: 121 WAVAGWPPGSALQLRLGMPSVCEEQQVTVVGLAHPCVWAFTHIVKLCKQGCTGSSWYVSY 180 WAVAGWPPGSALQLRLGMPSVCEEQQVTVVGLAHPCVWAFTHIVKLCKQGCTGSSWYVSY Sbjct: 121 WAVAGWPPGSALQLRLGMPSVCEEQQVTVVGLAHPCVWAFTHIVKLCKQGCTGSSWYVSY 180 Query: 181 ERSYRCSGNLFQWKKMLRW 199 ERSYRCSGNLFQWKKMLRW Sbjct: 181 ERSYRCSGNLFQWKKMLRW 199 >gi|110347457 EGF-like-domain, multiple 3 [Homo sapiens] Length = 1541 Score = 60.1 bits (144), Expect = 1e-09 Identities = 28/59 (47%), Positives = 36/59 (61%) Query: 124 AGWPPGSALQLRLGMPSVCEEQQVTVVGLAHPCVWAFTHIVKLCKQGCTGSSWYVSYER 182 A PP L L+ GMP VC EQ++T+VG PCV A +H V + K GC +W V +ER Sbjct: 30 ASVPPRPLLPLQPGMPHVCAEQELTLVGRRQPCVQALSHTVPVWKAGCGWQAWCVGHER 88 >gi|239757749 PREDICTED: hypothetical protein [Homo sapiens] Length = 264 Score = 38.9 bits (89), Expect = 0.003 Identities = 31/81 (38%), Positives = 38/81 (46%), Gaps = 12/81 (14%) Query: 54 AAAVPSADRRAAPASRALHQLLPDKPNFCA---GFGLAEPERRTARSPGGGQGGSASPRC 110 A A P+A RR+ PA R LLP CA G L+ P R+ + +G AS Sbjct: 77 APAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALAS--- 133 Query: 111 PRDCGSGASAWAVAGWPPGSA 131 CG A W AGWPP +A Sbjct: 134 ---CGLRA-GW--AGWPPQAA 148 >gi|239752259 PREDICTED: similar to hCG1981372 [Homo sapiens] Length = 317 Score = 38.9 bits (89), Expect = 0.003 Identities = 31/81 (38%), Positives = 38/81 (46%), Gaps = 12/81 (14%) Query: 54 AAAVPSADRRAAPASRALHQLLPDKPNFCA---GFGLAEPERRTARSPGGGQGGSASPRC 110 A A P+A RR+ PA R LLP CA G L+ P R+ + +G AS Sbjct: 71 APAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALAS--- 127 Query: 111 PRDCGSGASAWAVAGWPPGSA 131 CG A W AGWPP +A Sbjct: 128 ---CGLRA-GW--AGWPPQAA 142 >gi|239746772 PREDICTED: similar to hCG1981372 [Homo sapiens] Length = 317 Score = 38.9 bits (89), Expect = 0.003 Identities = 31/81 (38%), Positives = 38/81 (46%), Gaps = 12/81 (14%) Query: 54 AAAVPSADRRAAPASRALHQLLPDKPNFCA---GFGLAEPERRTARSPGGGQGGSASPRC 110 A A P+A RR+ PA R LLP CA G L+ P R+ + +G AS Sbjct: 71 APAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALAS--- 127 Query: 111 PRDCGSGASAWAVAGWPPGSA 131 CG A W AGWPP +A Sbjct: 128 ---CGLRA-GW--AGWPPQAA 142 >gi|239746769 PREDICTED: similar to Serine/threonine-protein kinase PRKX (Protein kinase PKX1) [Homo sapiens] Length = 330 Score = 38.9 bits (89), Expect = 0.003 Identities = 31/81 (38%), Positives = 38/81 (46%), Gaps = 12/81 (14%) Query: 54 AAAVPSADRRAAPASRALHQLLPDKPNFCA---GFGLAEPERRTARSPGGGQGGSASPRC 110 A A P+A RR+ PA R LLP CA G L+ P R+ + +G AS Sbjct: 84 APAFPAASRRSVPAPRGRRLLLPGAVAACAVSDGQPLSPPLRQPRPAARAPEGALAS--- 140 Query: 111 PRDCGSGASAWAVAGWPPGSA 131 CG A W AGWPP +A Sbjct: 141 ---CGLRA-GW--AGWPPQAA 155 >gi|112789555 ADAM metallopeptidase with thrombospondin type 1 motif, 19 preproprotein [Homo sapiens] Length = 1207 Score = 35.4 bits (80), Expect = 0.032 Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 3/53 (5%) Query: 92 RRTARSPGGGQGGSASPRCPRDCGSGASAWAVAGWPPGSALQLRLGMPSVCEE 144 RR P GG GGSA P R G G SA A A GS+ ++R P EE Sbjct: 44 RREPVDPAGGSGGSADPGWVRGVGGGGSARAQAA---GSSREVRSVAPVPLEE 93 >gi|115334682 SNAP25-interacting protein [Homo sapiens] Length = 1183 Score = 35.0 bits (79), Expect = 0.042 Identities = 37/137 (27%), Positives = 52/137 (37%), Gaps = 16/137 (11%) Query: 19 APGG----AGACSSAATEPLGLARPLLALPDACD-ACWGQAAAVPSADRRAAPASRALHQ 73 +PGG AG+ S+A P L P + + G VP+ D A+ + Sbjct: 522 SPGGKTRSAGSASTAGAPPSEL------FPGPGERSLVGFGPPVPAKDTETRERMEAMEK 575 Query: 74 LLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSG---ASAWAVAGWPPGS 130 + L E T G G+A+P P CGSG + A V+G PP S Sbjct: 576 QIASLTGLVQSALLRGSEPETPSEKIEGSNGAATPSAP--CGSGGRSSGATPVSGPPPPS 633 Query: 131 ALQLRLGMPSVCEEQQV 147 A G P+ Q+ Sbjct: 634 ASSTPAGQPTAVSRLQM 650 >gi|157266326 oculocutaneous albinism II [Homo sapiens] Length = 838 Score = 33.5 bits (75), Expect = 0.12 Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 6/65 (9%) Query: 61 DRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASA 120 D R P + A+ L P+ GLAE R P G G S CPR +G S+ Sbjct: 7 DGRRYPGAPAVELLQTSVPS-----GLAELVAGKRRLPRGAGGADPSHSCPRG-AAGQSS 60 Query: 121 WAVAG 125 WA AG Sbjct: 61 WAPAG 65 >gi|239754368 PREDICTED: hypothetical protein [Homo sapiens] Length = 336 Score = 33.5 bits (75), Expect = 0.12 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Query: 86 GLAEPERRTARSPGGGQGGSASPRCPRDCGSGASAWAVA--GWPPGSALQLRLGMPSVC 142 G P R+ RS G G+ P G+G S WA A GWP S+ +P C Sbjct: 228 GPGPPALRSGRSRGSGR----PPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEEC 282 >gi|239748915 PREDICTED: hypothetical protein XP_002346855 [Homo sapiens] Length = 336 Score = 33.5 bits (75), Expect = 0.12 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Query: 86 GLAEPERRTARSPGGGQGGSASPRCPRDCGSGASAWAVA--GWPPGSALQLRLGMPSVC 142 G P R+ RS G G+ P G+G S WA A GWP S+ +P C Sbjct: 228 GPGPPALRSGRSRGSGR----PPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEEC 282 >gi|239742939 PREDICTED: hypothetical protein XP_002342693 [Homo sapiens] Length = 321 Score = 33.5 bits (75), Expect = 0.12 Identities = 20/59 (33%), Positives = 25/59 (42%), Gaps = 6/59 (10%) Query: 86 GLAEPERRTARSPGGGQGGSASPRCPRDCGSGASAWAVA--GWPPGSALQLRLGMPSVC 142 G P R+ RS G G+ P G+G S WA A GWP S+ +P C Sbjct: 228 GPGPPALRSGRSRGSGR----PPDSAGAAGTGGSGWAAALRGWPAPSSFAASSALPEEC 282 >gi|239757743 PREDICTED: hypothetical protein [Homo sapiens] Length = 235 Score = 32.0 bits (71), Expect = 0.36 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%) Query: 93 RTARSPGGGQGGSASPRCPRDCGSGASAWAVAGW---PPG 129 RT QG PRCP G+ S AGW PPG Sbjct: 135 RTGNGQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPG 174 >gi|169213965 PREDICTED: similar to hCG1645909 [Homo sapiens] Length = 591 Score = 32.0 bits (71), Expect = 0.36 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 7/47 (14%) Query: 87 LAEPERRTARSP---GGGQGGSASP-RCPRDCGSGASAWAVAGWPPG 129 L +PE+ A SP G G GG+ +P RCP CG A + PPG Sbjct: 153 LNKPEKLVAPSPDQKGSGTGGTTTPPRCPDSCGHPRPA---SSSPPG 196 >gi|239755867 PREDICTED: hypothetical protein [Homo sapiens] Length = 93 Score = 32.0 bits (71), Expect = 0.36 Identities = 30/85 (35%), Positives = 34/85 (40%), Gaps = 4/85 (4%) Query: 22 GAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSADR---RAAPASRALHQLLPDK 78 G G T+PL A ALP GQAAA A + AA A+ +L Sbjct: 5 GGGRAEPRFTKPLPRACIPAALPCGPQTR-GQAAAGSGARQFGPHAASRRAAVQGVLGGA 63 Query: 79 PNFCAGFGLAEPERRTARSPGGGQG 103 P FCA G P R R GQG Sbjct: 64 PRFCASEGAGGPLPRLGRLLPSGQG 88 >gi|239753673 PREDICTED: hypothetical protein [Homo sapiens] Length = 380 Score = 32.0 bits (71), Expect = 0.36 Identities = 46/160 (28%), Positives = 62/160 (38%), Gaps = 22/160 (13%) Query: 3 PGLRGLL----GHWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDAC-WGQAAAV 57 PG RG L G A + +A A S +G + + A A A G A Sbjct: 117 PGARGRLAPARGGAARARLLAVEVRVAVQSERHRHVGAVQLVPAPRQAAQAADTGPRHAS 176 Query: 58 PSADRRAAPASRALHQLL-----PDKPNFCAGFGLAEPERRTA--RSPGGGQGGSASPRC 110 P A R A A R+ +LL P +P P RR+ R GG G + R Sbjct: 177 PGARRPAPGARRSRPRLLRPASPPPRP---------APRRRSTAPRHEGGRPGRGRTRRQ 227 Query: 111 PRDCGSGASAWAVAGWPPGSALQLRLGMP-SVCEEQQVTV 149 P G+G + + G G L R G P + C QV++ Sbjct: 228 PHLAGAGCARLELEGARMGERLHRRQGAPETACIHLQVSI 267 >gi|239752237 PREDICTED: hypothetical protein XP_002348168 [Homo sapiens] Length = 217 Score = 32.0 bits (71), Expect = 0.36 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%) Query: 93 RTARSPGGGQGGSASPRCPRDCGSGASAWAVAGW---PPG 129 RT QG PRCP G+ S AGW PPG Sbjct: 117 RTGNGQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPG 156 >gi|239751822 PREDICTED: similar to hCG1645909 [Homo sapiens] Length = 591 Score = 32.0 bits (71), Expect = 0.36 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 7/47 (14%) Query: 87 LAEPERRTARSP---GGGQGGSASP-RCPRDCGSGASAWAVAGWPPG 129 L +PE+ A SP G G GG+ +P RCP CG A + PPG Sbjct: 153 LNKPEKLVAPSPDQKGSGTGGTTTPPRCPDSCGHPRPA---SSSPPG 196 >gi|239750351 PREDICTED: hypothetical protein XP_002347378 [Homo sapiens] Length = 93 Score = 32.0 bits (71), Expect = 0.36 Identities = 30/85 (35%), Positives = 34/85 (40%), Gaps = 4/85 (4%) Query: 22 GAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSADR---RAAPASRALHQLLPDK 78 G G T+PL A ALP GQAAA A + AA A+ +L Sbjct: 5 GGGRAEPRFTKPLPRACIPAALPCGPQTR-GQAAAGSGARQFGPHAASRRAAVQGVLGGA 63 Query: 79 PNFCAGFGLAEPERRTARSPGGGQG 103 P FCA G P R R GQG Sbjct: 64 PRFCASEGAGGPLPRLGRLLPSGQG 88 >gi|239746757 PREDICTED: hypothetical protein XP_002343835 [Homo sapiens] Length = 281 Score = 32.0 bits (71), Expect = 0.36 Identities = 16/40 (40%), Positives = 17/40 (42%), Gaps = 3/40 (7%) Query: 93 RTARSPGGGQGGSASPRCPRDCGSGASAWAVAGW---PPG 129 RT QG PRCP G+ S AGW PPG Sbjct: 181 RTGNGQASSQGQEEGPRCPHGHGTEGSYRETAGWDGTPPG 220 >gi|239746313 PREDICTED: similar to hCG1645909 [Homo sapiens] Length = 591 Score = 32.0 bits (71), Expect = 0.36 Identities = 20/47 (42%), Positives = 25/47 (53%), Gaps = 7/47 (14%) Query: 87 LAEPERRTARSP---GGGQGGSASP-RCPRDCGSGASAWAVAGWPPG 129 L +PE+ A SP G G GG+ +P RCP CG A + PPG Sbjct: 153 LNKPEKLVAPSPDQKGSGTGGTTTPPRCPDSCGHPRPA---SSSPPG 196 >gi|143770741 glycoprotein VI (platelet) isoform 1 [Homo sapiens] Length = 620 Score = 31.2 bits (69), Expect = 0.61 Identities = 27/101 (26%), Positives = 40/101 (39%), Gaps = 7/101 (6%) Query: 37 ARPLLALPDACDACWGQAAAVPSADRRAAPASRALHQLLPDKPNFCAGFGLAEPERR-TA 95 +R + A P D+ G++ P + P P+ P +G GLA+PE A Sbjct: 244 SRSITASPKESDSPAGESC--PPVLHQGQPGPDMPRGCDPNNPGGVSGRGLAQPEEAPAA 301 Query: 96 RSPGGGQGGSASPRCPRDCGSGASAWAVAGWPPGSALQLRL 136 + G + SA P P D +GW P Q R+ Sbjct: 302 QGQGCAEAASAPPAPPAD----PEITRGSGWRPTGCSQPRV 338 >gi|116734702 homeobox D13 [Homo sapiens] Length = 343 Score = 31.2 bits (69), Expect = 0.61 Identities = 32/118 (27%), Positives = 43/118 (36%), Gaps = 18/118 (15%) Query: 19 APGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSADRRAAPASRALHQLLPDK 78 AP + + S AA G R L+ P G+AAA +A AA A+ Sbjct: 22 APASSSSSSVAAAAASGQCRGFLSAPVFAGTHSGRAAAAAAAAAAAAAAA---------- 71 Query: 79 PNFCAGFGLAEPERRTARSPGGGQGG--SASPRCP--RDCGSGASAWAVAGWPPGSAL 132 +GF RT S +A P P ++C + A A A P AL Sbjct: 72 ----SGFAYPGTSERTGSSSSSSSSAVVAARPEAPPAKECPAPTPAAAAAAPPSAPAL 125 >gi|57529222 basic helix-loop-helix domain containing, class B, 4 [Homo sapiens] Length = 225 Score = 31.2 bits (69), Expect = 0.61 Identities = 32/107 (29%), Positives = 36/107 (33%), Gaps = 16/107 (14%) Query: 5 LRGLLG--HWAHSVSVAPGGAGACSSAATEPLGLARPLLALPDACDACWGQAAAVPSADR 62 L+ L G + A S A AG AA EP +A G P D Sbjct: 4 LKSLSGDAYLALSHGYAAAAAGLAYGAAREP--------------EAARGYGTPGPGGDL 49 Query: 63 RAAPASRALHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPR 109 AAPA RA Q A +RR R PG G PR Sbjct: 50 PAAPAPRAPAQAAESSGEQSGDEDDAFEQRRRRRGPGSAADGRRRPR 96 >gi|54873602 hypothetical protein LOC220382 [Homo sapiens] Length = 426 Score = 31.2 bits (69), Expect = 0.61 Identities = 35/115 (30%), Positives = 46/115 (40%), Gaps = 11/115 (9%) Query: 16 VSVAPGGAGACSSAATEPLGLARPLLA--LPDACDACWGQAAAVPSADRRAAPAS---RA 70 + AP G + S+A T RPL A P G+AA A + AA AS R+ Sbjct: 108 MGAAPPGPPSPSAADTPA---KRPLAAPSAPTVAAPAHGKAAPRREASQAAAAASLQSRS 164 Query: 71 LHQLLPDKPNFCAGFGLAEPERRTARSPGGGQGGSASPRCPRDCGSGASAWAVAG 125 L L + G AEP +P G GG+ + D A A A+ G Sbjct: 165 LAALFDSLRHVPGG---AEPAGGEVAAPAAGLGGAGTGGAGGDVAGPAGATAIPG 216 >gi|239754611 PREDICTED: hypothetical protein [Homo sapiens] Length = 178 Score = 30.8 bits (68), Expect = 0.79 Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 13/71 (18%) Query: 37 ARPLLALPDACDACWGQAAAVPSADRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTAR 96 ARP P+A A G+AA + A +R APA +A H G G P R+ Sbjct: 97 ARPPTGAPEA-PALSGRAARLHGA-QRGAPAGQARH-----------GAGNRHPPRQGQE 143 Query: 97 SPGGGQGGSAS 107 GGG GG S Sbjct: 144 EDGGGCGGRDS 154 >gi|239749157 PREDICTED: hypothetical protein XP_002346930 [Homo sapiens] Length = 178 Score = 30.8 bits (68), Expect = 0.79 Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 13/71 (18%) Query: 37 ARPLLALPDACDACWGQAAAVPSADRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTAR 96 ARP P+A A G+AA + A +R APA +A H G G P R+ Sbjct: 97 ARPPTGAPEA-PALSGRAARLHGA-QRGAPAGQARH-----------GAGNRHPPRQGQE 143 Query: 97 SPGGGQGGSAS 107 GGG GG S Sbjct: 144 EDGGGCGGRDS 154 >gi|239743220 PREDICTED: hypothetical protein XP_002342806 [Homo sapiens] Length = 178 Score = 30.8 bits (68), Expect = 0.79 Identities = 26/71 (36%), Positives = 32/71 (45%), Gaps = 13/71 (18%) Query: 37 ARPLLALPDACDACWGQAAAVPSADRRAAPASRALHQLLPDKPNFCAGFGLAEPERRTAR 96 ARP P+A A G+AA + A +R APA +A H G G P R+ Sbjct: 97 ARPPTGAPEA-PALSGRAARLHGA-QRGAPAGQARH-----------GAGNRHPPRQGQE 143 Query: 97 SPGGGQGGSAS 107 GGG GG S Sbjct: 144 EDGGGCGGRDS 154 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.320 0.134 0.463 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 9,992,485 Number of Sequences: 37866 Number of extensions: 547136 Number of successful extensions: 2468 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 28 Number of HSP's successfully gapped in prelim test: 116 Number of HSP's that attempted gapping in prelim test: 2394 Number of HSP's gapped (non-prelim): 182 length of query: 199 length of database: 18,247,518 effective HSP length: 97 effective length of query: 102 effective length of database: 14,574,516 effective search space: 1486600632 effective search space used: 1486600632 T: 11 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.