Guide to the Human Genome
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Name: PRC1 Sequence: fasta or formatted (566aa) NCBI GI: 40807445
Description:

protein regulator of cytokinesis 1 isoform 3

Referenced in:

Spindle, M phase, and Meiosis

Other entries for this name:
alt prot [606aa] protein regulator of cytokinesis 1 isoform 2
alt prot [620aa] protein regulator of cytokinesis 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         32           2
 C cysteine            2.1         12           1
 D aspartate           3.0         17           1
 E glutamate          13.8         78           3
 F phenylalanine       3.0         17           1
 G glycine             3.4         19           2
 H histidine           2.1         12           1
 I isoleucine          4.6         26           2
 K lysine              8.5         48           2
 L leucine            11.3         64           2
 M methionine          2.8         16           2
 N asparagine          3.4         19           1
 P proline             3.4         19           2
 Q glutamine           6.9         39           1
 R arginine            7.6         43           2
 S serine              5.8         33           2
 T threonine           5.1         29           3
 V valine              4.8         27           2
 W tryptophan          1.2          7           1
 Y tyrosine            1.6          9           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein regulator of cytokinesis 1 isoform 3 
PRC1                  0.984   protein regulator of cytokinesis 1 isoform 2 
PRC1                  0.984   protein regulator of cytokinesis 1 isoform 1 
CENPE                 0.042   centromere protein E 
PPL                   0.036   periplakin 
LOC645202             0.036   PREDICTED: hypothetical protein LOC645202 
LOC727832             0.033   golgi autoantigen, golgin subfamily a-like 
LOC283767             0.032   golgi autoantigen, golgin subfamily a-like 
PLEC1                 0.031   plectin 1 isoform 11 
PLEC1                 0.031   plectin 1 isoform 10 
PLEC1                 0.031   plectin 1 isoform 8 
PLEC1                 0.031   plectin 1 isoform 7 
PLEC1                 0.031   plectin 1 isoform 6 
PLEC1                 0.031   plectin 1 isoform 3 
PLEC1                 0.031   plectin 1 isoform 2 
PLEC1                 0.031   plectin 1 isoform 1 
AKAP9                 0.031   A-kinase anchor protein 9 isoform 2 
AKAP9                 0.031   A-kinase anchor protein 9 isoform 3 
LOC283685             0.029   PREDICTED: golgi autoantigen, golgin subfamily a-li...
TCHH                  0.029   trichohyalin 
GOLGA4                0.029   golgi autoantigen, golgin subfamily a, 4 
LOC440243             0.029   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC283685             0.028   PREDICTED: golgi autoantigen, golgin subfamily a-li...
CROCC                 0.027   ciliary rootlet coiled-coil 
MYH9                  0.027   myosin, heavy polypeptide 9, non-muscle 
LOC400352             0.026   PREDICTED: similar to Putative golgin subfamily A m...
CEP110                0.026   centrosomal protein 110kDa 
LOC100132816          0.026   PREDICTED: similar to Putative golgin subfamily A m...
PCNT                  0.026   pericentrin 
ROCK1                 0.025   Rho-associated, coiled-coil containing protein kinase...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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