Guide to the Human Genome
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Name: PRC1 Sequence: fasta or formatted (620aa) NCBI GI: 4506039
Description:

protein regulator of cytokinesis 1 isoform 1

Referenced in:

Spindle, M phase, and Meiosis

Other entries for this name:
alt prot [606aa] protein regulator of cytokinesis 1 isoform 2
alt prot [566aa] protein regulator of cytokinesis 1 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.8         36           2
 C cysteine            1.9         12           1
 D aspartate           3.2         20           1
 E glutamate          12.9         80           3
 F phenylalanine       2.7         17           1
 G glycine             3.7         23           2
 H histidine           1.9         12           1
 I isoleucine          4.5         28           2
 K lysine              8.1         50           2
 L leucine            11.1         69           2
 M methionine          2.6         16           2
 N asparagine          3.7         23           1
 P proline             3.5         22           2
 Q glutamine           6.6         41           1
 R arginine            7.1         44           2
 S serine              7.7         48           2
 T threonine           5.2         32           3
 V valine              4.7         29           2
 W tryptophan          1.1          7           1
 Y tyrosine            1.8         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein regulator of cytokinesis 1 isoform 1 
PRC1                  0.970   protein regulator of cytokinesis 1 isoform 2 
PRC1                  0.901   protein regulator of cytokinesis 1 isoform 3 
CENPE                 0.038   centromere protein E 
PPL                   0.033   periplakin 
LOC645202             0.033   PREDICTED: hypothetical protein LOC645202 
LOC727832             0.030   golgi autoantigen, golgin subfamily a-like 
LOC283767             0.029   golgi autoantigen, golgin subfamily a-like 
PLEC1                 0.028   plectin 1 isoform 11 
PLEC1                 0.028   plectin 1 isoform 10 
PLEC1                 0.028   plectin 1 isoform 8 
PLEC1                 0.028   plectin 1 isoform 7 
PLEC1                 0.028   plectin 1 isoform 6 
PLEC1                 0.028   plectin 1 isoform 3 
PLEC1                 0.028   plectin 1 isoform 2 
PLEC1                 0.028   plectin 1 isoform 1 
LOC283685             0.027   PREDICTED: golgi autoantigen, golgin subfamily a-li...
TCHH                  0.027   trichohyalin 
GOLGA4                0.027   golgi autoantigen, golgin subfamily a, 4 
LOC440243             0.027   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC283685             0.026   PREDICTED: golgi autoantigen, golgin subfamily a-li...
CROCC                 0.025   ciliary rootlet coiled-coil 
MYH9                  0.025   myosin, heavy polypeptide 9, non-muscle 
LOC400352             0.023   PREDICTED: similar to Putative golgin subfamily A m...
CEP110                0.023   centrosomal protein 110kDa 
LOC100132816          0.023   PREDICTED: similar to Putative golgin subfamily A m...
PCNT                  0.023   pericentrin 
ROCK1                 0.023   Rho-associated, coiled-coil containing protein kinase...
MNS1                  0.023   meiosis-specific nuclear structural 1 
EEA1                  0.023   early endosome antigen 1, 162kD 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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