Guide to the Human Genome
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Name: PRC1 Sequence: fasta or formatted (606aa) NCBI GI: 40807443
Description:

protein regulator of cytokinesis 1 isoform 2

Referenced in:

Spindle, M phase, and Meiosis

Other entries for this name:
alt prot [566aa] protein regulator of cytokinesis 1 isoform 3
alt prot [620aa] protein regulator of cytokinesis 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.9         36           2
 C cysteine            2.0         12           1
 D aspartate           3.0         18           1
 E glutamate          13.2         80           3
 F phenylalanine       2.8         17           1
 G glycine             3.6         22           2
 H histidine           2.0         12           1
 I isoleucine          4.6         28           2
 K lysine              8.1         49           2
 L leucine            11.1         67           2
 M methionine          2.6         16           2
 N asparagine          3.8         23           1
 P proline             3.5         21           2
 Q glutamine           6.6         40           1
 R arginine            7.3         44           2
 S serine              7.3         44           2
 T threonine           5.1         31           3
 V valine              4.6         28           2
 W tryptophan          1.2          7           1
 Y tyrosine            1.8         11           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   protein regulator of cytokinesis 1 isoform 2 
PRC1                  0.991   protein regulator of cytokinesis 1 isoform 1 
PRC1                  0.921   protein regulator of cytokinesis 1 isoform 3 
CENPE                 0.039   centromere protein E 
PPL                   0.034   periplakin 
LOC645202             0.033   PREDICTED: hypothetical protein LOC645202 
LOC727832             0.031   golgi autoantigen, golgin subfamily a-like 
LOC283767             0.030   golgi autoantigen, golgin subfamily a-like 
PLEC1                 0.029   plectin 1 isoform 11 
PLEC1                 0.029   plectin 1 isoform 10 
PLEC1                 0.029   plectin 1 isoform 8 
PLEC1                 0.029   plectin 1 isoform 7 
PLEC1                 0.029   plectin 1 isoform 6 
PLEC1                 0.029   plectin 1 isoform 3 
PLEC1                 0.029   plectin 1 isoform 2 
PLEC1                 0.029   plectin 1 isoform 1 
CROCC                 0.029   ciliary rootlet coiled-coil 
LOC283685             0.027   PREDICTED: golgi autoantigen, golgin subfamily a-li...
TCHH                  0.027   trichohyalin 
GOLGA4                0.027   golgi autoantigen, golgin subfamily a, 4 
LOC440243             0.027   PREDICTED: Putative golgin subfamily A member 6-lik...
LOC283685             0.026   PREDICTED: golgi autoantigen, golgin subfamily a-li...
MYH9                  0.026   myosin, heavy polypeptide 9, non-muscle 
LOC400352             0.024   PREDICTED: similar to Putative golgin subfamily A m...
CEP110                0.024   centrosomal protein 110kDa 
LOC100132816          0.024   PREDICTED: similar to Putative golgin subfamily A m...
PCNT                  0.024   pericentrin 
ROCK1                 0.023   Rho-associated, coiled-coil containing protein kinase...
MNS1                  0.023   meiosis-specific nuclear structural 1 
EEA1                  0.023   early endosome antigen 1, 162kD 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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