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Search of human proteins with 40789265
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40789265 beta
1,4-N-acetylgalactosaminyltransferase-transferase 4 [Homo sapiens]
(1039 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 2137 0.0
gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transfera... 873 0.0
gi|194473684 chondroitin sulfate N-acetylgalactosaminyltransfera... 85 3e-16
gi|194473683 chondroitin sulfate N-acetylgalactosaminyltransfera... 85 3e-16
gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens] 78 5e-14
gi|24429592 chondroitin sulfate N-acetylgalactosaminyltransferas... 76 1e-13
gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens] 73 1e-12
gi|4502249 ArfGAP with SH3 domain, ankyrin repeat and PH domain ... 69 2e-11
gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Hom... 63 2e-09
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 63 2e-09
gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Hom... 63 2e-09
gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo sap... 63 2e-09
gi|19924099 synapsin I isoform Ia [Homo sapiens] 62 3e-09
gi|19924097 synapsin I isoform Ib [Homo sapiens] 62 3e-09
gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens] 61 5e-09
gi|11386183 WAS protein family, member 2 [Homo sapiens] 61 6e-09
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 60 1e-08
gi|4826998 splicing factor proline/glutamine rich (polypyrimidin... 59 2e-08
gi|163965366 nascent polypeptide-associated complex alpha subuni... 59 2e-08
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 59 2e-08
gi|85815829 SH3-domain binding protein 1 [Homo sapiens] 59 2e-08
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 59 3e-08
gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Ho... 59 3e-08
gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens] 58 5e-08
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens] 57 7e-08
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens] 57 7e-08
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 57 7e-08
gi|110832843 TBP-associated factor 4 [Homo sapiens] 57 9e-08
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 57 9e-08
gi|210032580 SET domain containing 1B [Homo sapiens] 57 9e-08
>gi|40789265 beta 1,4-N-acetylgalactosaminyltransferase-transferase 4
[Homo sapiens]
Length = 1039
Score = 2137 bits (5537), Expect = 0.0
Identities = 1039/1039 (100%), Positives = 1039/1039 (100%)
Query: 1 MPRLPVKKIRKQMKLLLLLLLLSCAAWLTYVHLGLVRQGRALRQRLGYGRDGEKLTSETD 60
MPRLPVKKIRKQMKLLLLLLLLSCAAWLTYVHLGLVRQGRALRQRLGYGRDGEKLTSETD
Sbjct: 1 MPRLPVKKIRKQMKLLLLLLLLSCAAWLTYVHLGLVRQGRALRQRLGYGRDGEKLTSETD 60
Query: 61 GRGVHAAPSTQRAEDSSESREEEQAPEGRDLDMLFPGGAGRLPLNFTHQTPPWREEYKGQ 120
GRGVHAAPSTQRAEDSSESREEEQAPEGRDLDMLFPGGAGRLPLNFTHQTPPWREEYKGQ
Sbjct: 61 GRGVHAAPSTQRAEDSSESREEEQAPEGRDLDMLFPGGAGRLPLNFTHQTPPWREEYKGQ 120
Query: 121 VNLHVFEDWCGGAVGHLRRNLHFPLFPHTRTTVKKLAVSPKWKNYGLRIFGFIHPARDGD 180
VNLHVFEDWCGGAVGHLRRNLHFPLFPHTRTTVKKLAVSPKWKNYGLRIFGFIHPARDGD
Sbjct: 121 VNLHVFEDWCGGAVGHLRRNLHFPLFPHTRTTVKKLAVSPKWKNYGLRIFGFIHPARDGD 180
Query: 181 VQFSVASDDNSEFWLSLDESPAAAQLVAFVGKTGSEWTAPGEFTKFSSQVSKPRRLMASR 240
VQFSVASDDNSEFWLSLDESPAAAQLVAFVGKTGSEWTAPGEFTKFSSQVSKPRRLMASR
Sbjct: 181 VQFSVASDDNSEFWLSLDESPAAAQLVAFVGKTGSEWTAPGEFTKFSSQVSKPRRLMASR 240
Query: 241 RYYFELLHKQDDRGSDHVEVGWRAFLPGLKFEVISSAHISLYTDESALKMDHVAHVPQSP 300
RYYFELLHKQDDRGSDHVEVGWRAFLPGLKFEVISSAHISLYTDESALKMDHVAHVPQSP
Sbjct: 241 RYYFELLHKQDDRGSDHVEVGWRAFLPGLKFEVISSAHISLYTDESALKMDHVAHVPQSP 300
Query: 301 ASHVGGRPPQEETSADMLRPDPRDTFFLTPRMESSSLENVLEPCAYAPTYVVKDFPIARY 360
ASHVGGRPPQEETSADMLRPDPRDTFFLTPRMESSSLENVLEPCAYAPTYVVKDFPIARY
Sbjct: 301 ASHVGGRPPQEETSADMLRPDPRDTFFLTPRMESSSLENVLEPCAYAPTYVVKDFPIARY 360
Query: 361 QGLQFVYLSFVYPNDYTRLTHMETDNKCFYRESPLYLERFGFYKYMKMDKEEGDEDEEDE 420
QGLQFVYLSFVYPNDYTRLTHMETDNKCFYRESPLYLERFGFYKYMKMDKEEGDEDEEDE
Sbjct: 361 QGLQFVYLSFVYPNDYTRLTHMETDNKCFYRESPLYLERFGFYKYMKMDKEEGDEDEEDE 420
Query: 421 VQRRAFLFLNPDDFLDDEDEGELLDSLEPTEAAPPRSGPQSPAPAAPAQPGATLAPPTPP 480
VQRRAFLFLNPDDFLDDEDEGELLDSLEPTEAAPPRSGPQSPAPAAPAQPGATLAPPTPP
Sbjct: 421 VQRRAFLFLNPDDFLDDEDEGELLDSLEPTEAAPPRSGPQSPAPAAPAQPGATLAPPTPP 480
Query: 481 RPRDGGTPRHSRALSWAARAARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRA 540
RPRDGGTPRHSRALSWAARAARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRA
Sbjct: 481 RPRDGGTPRHSRALSWAARAARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRA 540
Query: 541 PAPRAPWPPFPGVFLHPRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGR 600
PAPRAPWPPFPGVFLHPRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGR
Sbjct: 541 PAPRAPWPPFPGVFLHPRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGR 600
Query: 601 EGQARTLGPAAPTVDSNLSSEARPVTSFLSLSQVSGPQLPGEGEEEEEGEDDGAPGDEAA 660
EGQARTLGPAAPTVDSNLSSEARPVTSFLSLSQVSGPQLPGEGEEEEEGEDDGAPGDEAA
Sbjct: 601 EGQARTLGPAAPTVDSNLSSEARPVTSFLSLSQVSGPQLPGEGEEEEEGEDDGAPGDEAA 660
Query: 661 SEDSEEAAGPALGRWREDAIDWQRTFSVGAVDFELLRSDWNDLRCNVSGNLQLPEAEAVD 720
SEDSEEAAGPALGRWREDAIDWQRTFSVGAVDFELLRSDWNDLRCNVSGNLQLPEAEAVD
Sbjct: 661 SEDSEEAAGPALGRWREDAIDWQRTFSVGAVDFELLRSDWNDLRCNVSGNLQLPEAEAVD 720
Query: 721 VTAQYMERLNARHGGRFALLRIVNVEKRRDSARGSRFLLELELQERGGGRLRLSEYVFLR 780
VTAQYMERLNARHGGRFALLRIVNVEKRRDSARGSRFLLELELQERGGGRLRLSEYVFLR
Sbjct: 721 VTAQYMERLNARHGGRFALLRIVNVEKRRDSARGSRFLLELELQERGGGRLRLSEYVFLR 780
Query: 781 LPGARVGDADGESPEPAPAASVRPDGRPELCRPLRLAWRQDVMVHFIVPVKNQARWVAQF 840
LPGARVGDADGESPEPAPAASVRPDGRPELCRPLRLAWRQDVMVHFIVPVKNQARWVAQF
Sbjct: 781 LPGARVGDADGESPEPAPAASVRPDGRPELCRPLRLAWRQDVMVHFIVPVKNQARWVAQF 840
Query: 841 LADMAALHARTGDSRFSVVLVDFESEDMDVERALRAARLPRYQYLRRTGNFERSAGLQAG 900
LADMAALHARTGDSRFSVVLVDFESEDMDVERALRAARLPRYQYLRRTGNFERSAGLQAG
Sbjct: 841 LADMAALHARTGDSRFSVVLVDFESEDMDVERALRAARLPRYQYLRRTGNFERSAGLQAG 900
Query: 901 VDAVEDASSIVFLCDLHIHFPPNILDGIRKHCVEGRLAFAPVVMRLSCGSSPRDPHGYWE 960
VDAVEDASSIVFLCDLHIHFPPNILDGIRKHCVEGRLAFAPVVMRLSCGSSPRDPHGYWE
Sbjct: 901 VDAVEDASSIVFLCDLHIHFPPNILDGIRKHCVEGRLAFAPVVMRLSCGSSPRDPHGYWE 960
Query: 961 VNGFGLFGIYKSDFDRVGGMNTEEFRDQWGGEDWELLDRVLQAGLEVERLRLRNFYHHYH 1020
VNGFGLFGIYKSDFDRVGGMNTEEFRDQWGGEDWELLDRVLQAGLEVERLRLRNFYHHYH
Sbjct: 961 VNGFGLFGIYKSDFDRVGGMNTEEFRDQWGGEDWELLDRVLQAGLEVERLRLRNFYHHYH 1020
Query: 1021 SKRGMWSVRSRKGSRTGAS 1039
SKRGMWSVRSRKGSRTGAS
Sbjct: 1021 SKRGMWSVRSRKGSRTGAS 1039
>gi|71043500 beta 1,4-N-acetylgalactosaminyltransferase-transferase 3
[Homo sapiens]
Length = 998
Score = 873 bits (2256), Expect = 0.0
Identities = 497/1053 (47%), Positives = 638/1053 (60%), Gaps = 96/1053 (9%)
Query: 5 PVKKIRKQMKLLLLLLLLSCAAWLTYVHLGLVRQ--GRALRQRLGYGRDGEKLTSETDGR 62
PVK +R++ +LLL L ++S W Y+ L Q G L +R G R+ L R
Sbjct: 15 PVKLLRRRFRLLLALAVVSVGLWTLYLELVASAQVGGNPLNRRYGSWRE---LAKALASR 71
Query: 63 GVHAA-PSTQRAEDSSESREEEQAPEGRDLDMLFPGGAGRLPLNFTHQTPPWREEYKGQV 121
+ A P Q S E+ D+D + L N + PW E++G+
Sbjct: 72 NIPAVDPHLQFYHPQRLSLEDH------DIDQGVSSNSSYLKWN---KPVPWLSEFRGRA 122
Query: 122 NLHVFEDWCGGAVGHLRRNLHFPLFPHTRTTVKKLAVSPKWKNYGLRIFGFIHPARDGDV 181
NLHVFEDWCG ++ LRRNLHFPL+PH RTT++KLAVSPKW NYGLRIFG++HP DG +
Sbjct: 123 NLHVFEDWCGSSIQQLRRNLHFPLYPHIRTTLRKLAVSPKWTNYGLRIFGYLHPFTDGKI 182
Query: 182 QFSVASDDNSEFWLSLDESPAAAQLVAFVGKTGSEWTAPGEFTKFSSQVSKPRRLMASRR 241
QF++A+DDN+EFWLSLD+ + QL+A VGKTG EWTAPGEF KF SQ+SKP L AS R
Sbjct: 183 QFAIAADDNAEFWLSLDDQVSGLQLLASVGKTGKEWTAPGEFGKFRSQISKPVSLSASHR 242
Query: 242 YYFELLHKQDDRGSDHVEVGWRAFLPGLKFEVISSAHISLYTDESALKMDHVAHVPQSPA 301
YYFE+LHKQ++ G+DHVEV WR PG KF +I S +SL+T+E+ L+MD V H+PQ+ A
Sbjct: 243 YYFEVLHKQNEEGTDHVEVAWRRNDPGAKFTIIDSLSLSLFTNETFLQMDEVGHIPQTAA 302
Query: 302 SHVGGR---PPQEETSADMLRPDPRDTFFLTPRMESSSLENVLEPCAYAPTYVVKDFPIA 358
SHV P E+ ADMLRPDPRDT + P + S L +VL C Y P+Y+V P+
Sbjct: 303 SHVDSSNALPRDEQPPADMLRPDPRDTLYRVPLIPKSHLRHVLPDCPYKPSYLVDGLPLQ 362
Query: 359 RYQGLQFVYLSFVYPNDYTRLTHMETDNKCFYRESPLYLERFGFYKYMKMDKEEGDEDEE 418
RYQGL+FV+LSFVYPNDYTRL+HMET NKCFY+E+ Y +RF F +Y+K+D+ E E+
Sbjct: 363 RYQGLRFVHLSFVYPNDYTRLSHMETHNKCFYQENAYYQDRFSFQEYIKIDQPEKQGLEQ 422
Query: 419 DEVQRRAFLFLNPDDFLDDEDEGELLDSLEPTEAAPPRSGPQSPAPAAPAQPGAT----- 473
+ ++ L++ GE+ + + R PA+ + AT
Sbjct: 423 PGFE---------ENLLEESQYGEVAEETPASNNQNARMLEGRQTPASTLEQDATDYRLR 473
Query: 474 LAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPG 533
+PR+G S+ S A+ F GR V+QP + P
Sbjct: 474 SLRKLLAQPREGLLAPFSKRNSTAS--------FPGRTS--HIPVQQPEKRKQKPSPEPS 523
Query: 534 QRASPRAPAPRAPWPPFPGVFLHP-RPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPAR 592
Q SP + WPP HP + LP Q+R P PRP G P+ TQ
Sbjct: 524 QD-SPHSDK----WPPG-----HPVKNLP--QMRGPR--PRPAG---DSPRKTQWLNQVE 566
Query: 593 AQATQGGREGQARTLGPAAPTVDSNLSSEARPVTSFLSLSQVSGPQLPGEGEEEEEGEDD 652
+ + R + R P AP E V + QV G + EGEEEEE ED
Sbjct: 567 SYIAEQRRGDRMR---PQAP--GRGWHGEEEVVAAAGQEGQVEGEE---EGEEEEEEED- 617
Query: 653 GAPGDEAASEDSEEAAGPALGRWREDAIDWQRTFSVGAVDFELLRSDWNDLRCNVSGNLQ 712
SE E P + ++W +TFS +DF+ LR+DW DL CN SGNL
Sbjct: 618 -------MSEVFEYV--PVF----DPVVNWDQTFSARNLDFQALRTDWIDLSCNTSGNLL 664
Query: 713 LPEAEAVDVTAQYMERLNARHGGRFALLRIVNVEKRRDSARGSRFLLELELQERGGGRLR 772
LPE EA++VT ++++LN R GR+ L RIVNVEKR+D RG R+LLELEL E+G +R
Sbjct: 665 LPEQEALEVTRVFLKKLNQRSRGRYQLQRIVNVEKRQDQLRGGRYLLELELLEQGQRVVR 724
Query: 773 LSEYVFLRLPGARVGDADGESPEPAPAASV--RPDGR-----------PELCRPLRLAWR 819
LSEYV R + A GE E + P R P+LC P +W
Sbjct: 725 LSEYVSAR-GWQGIDPAGGEEVEARNLQGLVWDPHNRRRQVLNTRAQEPKLCWPQGFSWS 783
Query: 820 QDVMVHFIVPVKNQARWVAQFLADMAALHARTGDSRFSVVLVDFESEDMDVERALRAARL 879
+VHF+VPVKNQARWV QF+ DM L TGD F++V+ D+ SEDMDVE AL+ ++L
Sbjct: 784 HRAVVHFVVPVKNQARWVQQFIKDMENLFQVTGDPHFNIVITDYSSEDMDVEMALKRSKL 843
Query: 880 PRYQYLRRTGNFERSAGLQAGVDAVEDASSIVFLCDLHIHFPPNILDGIRKHCVEGRLAF 939
YQY++ +GNFERSAGLQAG+D V+D SI+FLCDLHIHFP ++D IRKHCVEG++AF
Sbjct: 844 RSYQYVKLSGNFERSAGLQAGIDLVKDPHSIIFLCDLHIHFPAGVIDAIRKHCVEGKMAF 903
Query: 940 APVVMRLSCGSSPRDPHGYWEVNGFGLFGIYKSDFDRVGGMNTEEFRDQWGGEDWELLDR 999
AP+VMRL CG++P+ P GYWEVNGFGL GIYKSD DR+GGMNT+EFRD+WGGEDWELLDR
Sbjct: 904 APMVMRLHCGATPQWPEGYWEVNGFGLLGIYKSDLDRIGGMNTKEFRDRWGGEDWELLDR 963
Query: 1000 VLQAGLEVERLRLRNFYHHYHSKRGMWSVRSRK 1032
+LQAGL+VERL LRNF+HH+HSKRGMWS R K
Sbjct: 964 ILQAGLDVERLSLRNFFHHFHSKRGMWSRRQMK 996
>gi|194473684 chondroitin sulfate N-acetylgalactosaminyltransferase 1
[Homo sapiens]
Length = 532
Score = 85.1 bits (209), Expect = 3e-16
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 821 DVMVHFIVPVKNQARWVAQFLADMAALHARTGDSRFSVVLVDFESEDMD-----VERALR 875
+ +++ IVP+ + QF+ + + D R + +V F E+++ +E +
Sbjct: 260 NTLINVIVPLAKRVDKFRQFMQNFREMCIEQ-DGRVHLTVVYFGKEEINEVKGILENTSK 318
Query: 876 AARLPRYQYLRRTGNFERSAGLQAGVDAVEDASSIVFLCDLHIHFPPNILDGIRKHCVEG 935
AA + +++ G F R GL G + ++ ++F CD+ I+F L+ R + G
Sbjct: 319 AANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVDIYFTSEFLNTCRLNTQPG 378
Query: 936 RLAFAPVVMR-----LSCGSSPRDP-----------HGYWEVNGFGLFGIYKSDFDRVGG 979
+ F PV+ + G P G+W GFG+ Y+SDF +GG
Sbjct: 379 KKVFYPVLFSQYNPGIIYGHHDAVPPLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGG 438
Query: 980 MNTEEFRDQWGGEDWELLDRVLQAGLEVERLRLRNFYHHYHSKRGM 1025
+ + WGGED L + L + L V R +R +H +H KR M
Sbjct: 439 FDLD--IKGWGGEDVHLYRKYLHSNLIVVRTPVRGLFHLWHEKRCM 482
>gi|194473683 chondroitin sulfate N-acetylgalactosaminyltransferase 1
[Homo sapiens]
Length = 532
Score = 85.1 bits (209), Expect = 3e-16
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 24/226 (10%)
Query: 821 DVMVHFIVPVKNQARWVAQFLADMAALHARTGDSRFSVVLVDFESEDMD-----VERALR 875
+ +++ IVP+ + QF+ + + D R + +V F E+++ +E +
Sbjct: 260 NTLINVIVPLAKRVDKFRQFMQNFREMCIEQ-DGRVHLTVVYFGKEEINEVKGILENTSK 318
Query: 876 AARLPRYQYLRRTGNFERSAGLQAGVDAVEDASSIVFLCDLHIHFPPNILDGIRKHCVEG 935
AA + +++ G F R GL G + ++ ++F CD+ I+F L+ R + G
Sbjct: 319 AANFRNFTFIQLNGEFSRGKGLDVGARFWKGSNVLLFFCDVDIYFTSEFLNTCRLNTQPG 378
Query: 936 RLAFAPVVMR-----LSCGSSPRDP-----------HGYWEVNGFGLFGIYKSDFDRVGG 979
+ F PV+ + G P G+W GFG+ Y+SDF +GG
Sbjct: 379 KKVFYPVLFSQYNPGIIYGHHDAVPPLEQQLVIKKETGFWRDFGFGMTCQYRSDFINIGG 438
Query: 980 MNTEEFRDQWGGEDWELLDRVLQAGLEVERLRLRNFYHHYHSKRGM 1025
+ + WGGED L + L + L V R +R +H +H KR M
Sbjct: 439 FDLD--IKGWGGEDVHLYRKYLHSNLIVVRTPVRGLFHLWHEKRCM 482
>gi|39930517 sterile alpha motif domain containing 1 [Homo sapiens]
Length = 538
Score = 77.8 bits (190), Expect = 5e-14
Identities = 111/388 (28%), Positives = 140/388 (36%), Gaps = 64/388 (16%)
Query: 450 TEAAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFLG 509
T APPR+ +PA AA A P T APP PP P P +RA AA AA
Sbjct: 107 TPPAPPRAPRGAPAAAAAAAPPPTPAPPPPPAPVAAAAP--ARAPRAAAAAA-------- 156
Query: 510 RAPPPRPAVEQPPPKVYVTRVRPGQRASPRA---PAPRAPWPPFPGVFLHPRPLPRVQLR 566
PP P QP P+ QRA+P A PAP AP P P P V R
Sbjct: 157 -TAPPSPGPAQPGPR--------AQRAAPLAAPPPAPAAPPAVAPPAGPRRAPPPAVAAR 207
Query: 567 APPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLGPAAPTVDSNLSSEARPVT 626
PP PP P + PQ QP PP +G G R G A P R V
Sbjct: 208 EPPLPPPP--QPPAPPQQQQPPPPQPQPPPEG---GAVRAGGAARPV-------SLREVV 255
Query: 627 SFLSLSQVSGPQLPG---EGEEEEEGEDDG-----APGDEAASEDSEEAAGPALGRWRED 678
+L S +G +L +G EEE G G A P R
Sbjct: 256 RYLGGSGGAGGRLTRGRVQGLLEEEAAARGRLERTRLGALALPRGDRPGRAPPAASARPS 315
Query: 679 AIDWQRTFSVGAVDFELLRSDWNDLRCNVSGNLQLPEAEAVDVTAQYMERLNARHGGRFA 738
V + E + D +VS ++PE++ AQ+ +LN G + A
Sbjct: 316 RSKRGGEERVLEKEEEEDDDEDEDEEDDVSEGSEVPESDR-PAGAQH-HQLNGERGPQSA 373
Query: 739 LLRI-----VNVEKRRDSARGSRFLLELELQERGGGRLRLSEYVFLRLPGARVGDADG-E 792
R+ + +D RG G G ++ + G A G +
Sbjct: 374 KERVKEWTPCGPHQGQDEGRG---------PAPGSGTRQVFSMAAMNKEGGTASVATGPD 424
Query: 793 SPEPAPAASVRP-----DGRPELCRPLR 815
SP P P +P DG P C P R
Sbjct: 425 SPSPVPLPPGKPALPGADGTPFGCPPGR 452
Score = 57.0 bits (136), Expect = 9e-08
Identities = 69/248 (27%), Positives = 88/248 (35%), Gaps = 58/248 (23%)
Query: 449 PTEAAPPRSGP---QSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLP 505
PT A PP P +PA A A A APP+P + G RA R P
Sbjct: 129 PTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPG------------PRAQRAAP 176
Query: 506 LFLGRAPPPRPAVEQPP---PKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPR 562
L APPP PA PP P R P A+ P P P PP P P+
Sbjct: 177 L---AAPPPAPAA--PPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAP---------PQ 222
Query: 563 VQLRAPPRP-PRPHG---RRTGGPQATQPRPPARAQATQGGREGQARTLGPAAPTVDSNL 618
Q PP+P P P G R G + R R GG G+ T G ++
Sbjct: 223 QQQPPPPQPQPPPEGGAVRAGGAARPVSLREVVRYLGGSGGAGGRL-TRGRVQGLLEEEA 281
Query: 619 SSEARPVTSFLSLSQVSGPQLPGEG---------------------EEEEEGEDDGAPGD 657
++ R + L + PG +EEEE +D+ +
Sbjct: 282 AARGRLERTRLGALALPRGDRPGRAPPAASARPSRSKRGGEERVLEKEEEEDDDEDEDEE 341
Query: 658 EAASEDSE 665
+ SE SE
Sbjct: 342 DDVSEGSE 349
>gi|24429592 chondroitin sulfate N-acetylgalactosaminyltransferase 2
[Homo sapiens]
Length = 542
Score = 76.3 bits (186), Expect = 1e-13
Identities = 57/224 (25%), Positives = 91/224 (40%), Gaps = 28/224 (12%)
Query: 823 MVHFIVPVKNQARWVAQFLADM--AALHARTGDSRFSVVLVDFESEDMD-----VERALR 875
+++ IVP+ + QF+ + +H D + + +V F E + +E
Sbjct: 271 IINIIVPLAERTEAFVQFMQNFRDVCIHQ---DKKIHLTVVYFGKEGLSKVKSILESVTS 327
Query: 876 AARLPRYQYLRRTGNFERSAGLQAGVDAVEDASSIVFLCDLHIHFPPNILDGIRKHCVEG 935
+ Y + F R GL G A + ++F CD+ I+F L+ R + G
Sbjct: 328 ESNFHNYTLVSLNEEFNRGRGLNVGARAWDKGEVLMFFCDVDIYFSAEFLNSCRLNAEPG 387
Query: 936 RLAFAPVVMRLSCGS----------------SPRDPHGYWEVNGFGLFGIYKSDFDRVGG 979
+ F PVV L + + G+W GFG+ Y+SDF +GG
Sbjct: 388 KKVFYPVVFSLYNPAIVYANQEVPPPVEQQLVHKKDSGFWRDFGFGMTCQYRSDFLTIGG 447
Query: 980 MNTEEFRDQWGGEDWELLDRVLQAGLEVERLRLRNFYHHYHSKR 1023
+ E WGGED L + L L V R + +H +H KR
Sbjct: 448 FDMEV--KGWGGEDVHLYRKYLHGDLIVIRTPVPGLFHLWHEKR 489
>gi|31542309 chondroitin sulfate synthase 1 [Homo sapiens]
Length = 802
Score = 73.2 bits (178), Expect = 1e-12
Identities = 56/221 (25%), Positives = 96/221 (43%), Gaps = 23/221 (10%)
Query: 820 QDVMVHFIVPVKNQARWVAQFLADMAALHARTGDSRFSVVLVDFESEDMDVERALRAARL 879
+D ++ ++P+ + +F+ + + VVL+ + D + + R
Sbjct: 530 KDKKINILIPLSGRFDMFVRFMGNFEKTCLIPNQNVKLVVLLFNSDSNPDKAKQVELMRD 589
Query: 880 PRYQY-------LRRTGNFERSAGLQAGVDAVEDASSIVFLCDLHIHFPPNILDGIRKHC 932
R +Y L +G F R+ L+ G + S++F CD+ + F L R +
Sbjct: 590 YRIKYPKADMQILPVSGEFSRALALEVGSSQFNN-ESLLFFCDVDLVFTTEFLQRCRANT 648
Query: 933 VEGRLAFAPVVMR------LSCGSSPRDPH-------GYWEVNGFGLFGIYKSDFDRVGG 979
V G+ + P++ + G P D H G+W GFG+ IYK D RVGG
Sbjct: 649 VLGQQIYFPIIFSQYDPKIVYSGKVPSDNHFAFTQKTGFWRNYGFGITCIYKGDLVRVGG 708
Query: 980 MNTEEFRDQWGGEDWELLDRVLQAGLEVERLRLRNFYHHYH 1020
+ WG ED +L ++V+QAGL+ R + H +H
Sbjct: 709 FDVS--IQGWGLEDVDLFNKVVQAGLKTFRSQEVGVVHVHH 747
>gi|4502249 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
isoform a [Homo sapiens]
Length = 1006
Score = 68.9 bits (167), Expect = 2e-11
Identities = 69/229 (30%), Positives = 92/229 (40%), Gaps = 32/229 (13%)
Query: 461 SPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFLGRAPPPRPAVEQ 520
SP PA PA P T APP PPR S W + R+ PAV
Sbjct: 770 SPPPAQPAAPSTTSAPPLPPRNVGKVQTASSANTLWKTNSVSVDGGSRQRSSSDPPAVHP 829
Query: 521 PPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHP-RPLPR--VQLRAPPRPPRPHGR 577
P P + VT P +P P P A P P +P P Q+R PP PP+P R
Sbjct: 830 PLPPLRVTSTNP---LTPTPPPPVAKTPSVMEALSQPSKPAPPGISQIRPPPLPPQPPSR 886
Query: 578 ------RTGGPQAT------QPRPPARAQATQG-GREGQARTLGPAAPTVDSNLSSEARP 624
G ++T QPR P AT+ G A L P AP + +++ +P
Sbjct: 887 LPQKKPAPGADKSTPLTNKGQPRGPVDLSATEALGPLSNAMVLQPPAPMPRKSQATKLKP 946
Query: 625 --VTSFLS--------LSQVSGPQLPGEGEEEEE---GEDDGAPGDEAA 660
V + + L+ G + +GEE++E G DG PG + A
Sbjct: 947 KRVKALYNCVADNPDELTFSEGDVIIVDGEEDQEWWIGHIDGDPGRKGA 995
>gi|239754327 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 62.8 bits (151), Expect = 2e-09
Identities = 69/247 (27%), Positives = 91/247 (36%), Gaps = 39/247 (15%)
Query: 431 PDDFLDDEDEG---------ELLDSLEPTEAAPPRSGPQSPAPAAPAQPGATLAPPTPPR 481
PDDF D E G L S+ + P + G P P PG PP
Sbjct: 100 PDDFADKEVTGTSSLVNGNLRLYSSVG--DLRPGQYGQDLLIPPPP--PGPAPGPPQDIS 155
Query: 482 PRDGGTPRHSRALSWAARAARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAP 541
GG+P S + A P PL L PPP P++ PPP V P +SP P
Sbjct: 156 EPPGGSPLPSPP----STAPPPPPLLL--EPPPPPSMAPPPPPVLEALSPPHTLSSPSIP 209
Query: 542 APRAPWPPFPGVFLHPRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPA-----RAQAT 596
P PP P + P P V APP P PH T+ PP ++
Sbjct: 210 TPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASPH------TVGTRLFPPGGVTKWKSDVA 263
Query: 597 QGGREGQARTLGP---AAPTVDSNLSSEARPVTSFLSLSQVSGP------QLPGEGEEEE 647
GR+ +A P A S L P +F +V P +P + +E
Sbjct: 264 LNGRQAEATRASPPRSPAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEA 323
Query: 648 EGEDDGA 654
+++GA
Sbjct: 324 PRKEEGA 330
Score = 33.1 bits (74), Expect = 1.4
Identities = 48/207 (23%), Positives = 67/207 (32%), Gaps = 27/207 (13%)
Query: 436 DDEDEGELLDSLEPTEAAPPRSGP---QSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSR 492
D E + L+ T A PR G Q+ A P L PP PP P
Sbjct: 355 DRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPP----- 409
Query: 493 ALSWAARAARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPG 552
AA PLP A PP + P P + P P+P P
Sbjct: 410 ----LPPAAPPLPCAQKAAHPPAGFTKTPKSS------SPALKPKPNPPSPENTASSAPV 459
Query: 553 VFLHPRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLGPAAP 612
+ P + + LR RR + +P P Q+ +G + GP P
Sbjct: 460 DWRDPSQMEK--LRNELAAYLCGSRREDRFLSHRPGPTVAPQSKEGKK-------GPRLP 510
Query: 613 TVDSNLSSEARPVTSFLSLSQVSGPQL 639
++ LS A+ + + G L
Sbjct: 511 EKETLLSLPAKDTPPGVPEKSLGGSSL 537
Score = 30.4 bits (67), Expect = 9.1
Identities = 57/218 (26%), Positives = 73/218 (33%), Gaps = 33/218 (15%)
Query: 446 SLEPTEAAPPRSGPQS-PAPAAPAQPGATLAPPTPPRPRDG-GTPRHSRALSWAARAARP 503
SL+P P P++ P PA P P ATL P TPP+ G TP L + P
Sbjct: 630 SLQPKAMLGPAIPPKATPEPAIP--PKATLWPATPPKATLGPATP-----LKATSGPTTP 682
Query: 504 LPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRV 563
L G A + G P PA + P
Sbjct: 683 LKATSGPAIASTATTLPTTTSQLMAEKDSGPAGQPEKPASQEVSTP-------------S 729
Query: 564 QLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLGPAAPTVDSNLSSEAR 623
Q R P T G +++ PP + + GG G+ L S+LS E
Sbjct: 730 QARGEGSPSEATRLPTQGARSSAAFPP---KTSPGG--GEVPCL-YKPHCHQSSLSREVA 783
Query: 624 PVTSFLSLSQVSGPQLPGEGEEEEEGEDDGAPGDEAAS 661
V L+ +GP GE E E G P AS
Sbjct: 784 VVMPTLARGGAAGP-----GEPVEVKEPPGLPAKPPAS 816
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 62.8 bits (151), Expect = 2e-09
Identities = 74/256 (28%), Positives = 92/256 (35%), Gaps = 54/256 (21%)
Query: 449 PTEAAPPRSGPQSPAPAAPAQPGATLAPPTPP---------RPRDGGTPRHSRALSWAAR 499
P+ AAPP P SP + P P AT P PP P +P S + + R
Sbjct: 697 PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPR 756
Query: 500 AARPL---PLFLGRAPP---PRPAVEQPPPKVYVTRVRPGQRASPRAPAP---RAPWPPF 550
L PL + +PP P + +PPP+ P +A P PA +AP+ P
Sbjct: 757 VPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPS 816
Query: 551 PGVFLHPRPLPRVQ---------LRAPPRPPRPHGRRTGGPQATQP-RPPARAQATQGGR 600
+ + P P Q L+ PP PP P P RPP T
Sbjct: 817 ASLPMSPLATPPPQAPPVLAAPLLQVPPSPP-------ASPTLQAPRRPPTPGPDTSVSG 869
Query: 601 EGQARTLGPAAPTVDSNLSSEARPVTSFLSLSQVSGPQLPGEGE------EEEEGEDDGA 654
L P P S S S +SGP L G EE G D G
Sbjct: 870 PRLTLALAPGPPPPPSRSPS-----------STLSGPDLAGHSSSATSTPEELRGYDSGP 918
Query: 655 PGDEAAS--EDSEEAA 668
G AAS D+E AA
Sbjct: 919 EGGAAASPPPDAELAA 934
Score = 55.1 bits (131), Expect = 3e-07
Identities = 62/220 (28%), Positives = 82/220 (37%), Gaps = 42/220 (19%)
Query: 444 LDSLEPTEAAPPRS------GPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWA 497
L +L P + PPR GP S +P A P T A P PP P + TP + L +
Sbjct: 277 LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPP-PDNAATPLPA-TLPPS 334
Query: 498 ARAARPLPLF--LGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPP----FP 551
A PLPL APP + PP P +A P P PP P
Sbjct: 335 PPLATPLPLAPPSPSAPPSLQTLPSPP-------ATPPSQAPPSMTTPPMQAPPSLQTIP 387
Query: 552 GVFLHPRPLPRVQLRAPPRP-----------------PRPHGRRTGGPQATQ---PRPPA 591
+ + P L L+APP P H T P+ TQ P
Sbjct: 388 PIQV-PHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSR 446
Query: 592 RAQATQGGREGQARTLGPAAPTVDSNLSSEARPVTSFLSL 631
A QA PA+P + ++LS P++S L++
Sbjct: 447 PASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTI 486
Score = 45.8 bits (107), Expect = 2e-04
Identities = 47/156 (30%), Positives = 60/156 (38%), Gaps = 14/156 (8%)
Query: 449 PTEAAPPRSG----PQSPAPAAPAQPGATLA-PPTPPRPRDGGTPRHSRALSWAARAARP 503
P A+PP G P SP P Q LA PP P +P S + + +A
Sbjct: 596 PALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNA 655
Query: 504 LPLFLGRAP---PPRPAVEQP-----PPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFL 555
L + L +AP PP P V+ P P V + P Q A P AP PP P
Sbjct: 656 LAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQ-APPSLAAPPLQVPPSPPASP 714
Query: 556 HPRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPA 591
P +APP P + P A+ P P+
Sbjct: 715 PMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPS 750
Score = 45.1 bits (105), Expect = 4e-04
Identities = 56/191 (29%), Positives = 70/191 (36%), Gaps = 12/191 (6%)
Query: 442 ELLDSLEPTE---AAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAA 498
E L SL P A+ P + P P PA P APP+P TP A
Sbjct: 536 ENLPSLAPPPLQTASAPLTTPHLETPPCPA-PCPLQAPPSPLTTPPPETPSSIATPPPQA 594
Query: 499 RAARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPA--PRAPW-PPFPGVFL 555
A P G PP + PPP+ P +A P PA P +P P P
Sbjct: 595 PPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQA-- 652
Query: 556 HPRPLPRVQLRAP-PRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLG-PAAPT 613
P L L+AP PP P + P A+ P P+ +Q A L P +P
Sbjct: 653 -PNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPP 711
Query: 614 VDSNLSSEARP 624
+S A P
Sbjct: 712 ASPPMSPSATP 722
Score = 40.0 bits (92), Expect = 0.011
Identities = 53/194 (27%), Positives = 68/194 (35%), Gaps = 39/194 (20%)
Query: 455 PRSGP--------QSPAPAAPAQPGATLAPP---TPPRP-----RDGGTPRHSRALSWAA 498
PR+GP ++PA PA APP T P P R GT R
Sbjct: 75 PRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGL 134
Query: 499 RAARPLPLFLGRAP--PPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFP----- 551
R + + G+A P R A+ G R P P P P
Sbjct: 135 RISAEETVARGKATEAPKRSALSA------------GARRDTSGPTPGTPSPAMARRSRA 182
Query: 552 -GVFLH-PRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLGP 609
G + PRP P + R P PR T+P P AR + + GG G R
Sbjct: 183 AGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGG--GLQRPASR 240
Query: 610 AAPTVDSNLSSEAR 623
+ + + LSS AR
Sbjct: 241 SLSSSATPLSSPAR 254
Score = 39.7 bits (91), Expect = 0.015
Identities = 48/194 (24%), Positives = 64/194 (32%), Gaps = 20/194 (10%)
Query: 449 PTEAAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPR----HSRALSWAARAARPL 504
P A P P SP P + +++A P P P +P S LS A
Sbjct: 562 PCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQA 621
Query: 505 PLFLGRAP---PPRPAVEQP----------PPKVYVTRVRPGQRASPRAPAPRAPWPPFP 551
P L P PP P P P + + P +P +AP+ P
Sbjct: 622 PPXLALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPA 681
Query: 552 GVFLHPRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLG-PA 610
+ P P Q APP P + P A+ P P+ Q A L P
Sbjct: 682 SPPVSPSATPPSQ--APPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPP 739
Query: 611 APTVDSNLSSEARP 624
+P +S A P
Sbjct: 740 SPPASPPMSPSATP 753
Score = 39.7 bits (91), Expect = 0.015
Identities = 77/302 (25%), Positives = 98/302 (32%), Gaps = 81/302 (26%)
Query: 444 LDSLEPTEAAPPRSGPQSPAPAAPAQPGATLAPPTP-----PRPRDGGTPRHSRALSWAA 498
L +L A+ P P SP+ + P P AT P P P + +P S L
Sbjct: 797 LQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPR 856
Query: 499 RAARPLP--------LFLGRAPPPRPAVEQPPPKVYVTRVRPGQRAS------------- 537
R P P L L AP P P + P G +S
Sbjct: 857 RPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDS 916
Query: 538 -PRAPAPRAPWPPFPGVFLHPR-----PLPRVQLRAPPRPPRPHGRRTG----------- 580
P A +P P HP P P + R P P P TG
Sbjct: 917 GPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIY 976
Query: 581 ---GPQATQPRP----PARAQATQGGREG-------------QAR----TLGPAAPTVDS 616
GP++ P P P + T GG+ QAR LG +V
Sbjct: 977 ETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQ 1036
Query: 617 NLSSEARPVTSFLSLSQ-VSGPQLPGEGEEEEEGEDDGAPGDEAASEDSEEAAGPALGRW 675
+L S T L+ ++ +G G G E G GA AA D+E LGRW
Sbjct: 1037 HLLSR----TLLLAAAEGAAGGSGGGPGGAEGGGVTGGA---RAALSDAE------LGRW 1083
Query: 676 RE 677
E
Sbjct: 1084 AE 1085
Score = 37.7 bits (86), Expect = 0.057
Identities = 60/234 (25%), Positives = 85/234 (36%), Gaps = 31/234 (13%)
Query: 456 RSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLF-----LGR 510
++G + PAA A T PP PRP TP R L AA A PL +G
Sbjct: 9 KAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLG-AAGAVGRKPLAERAGGIGG 67
Query: 511 APPPRPAVEQPPPKVYVTRVR-PGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQLRAPP 569
A P A P + T R P R RAP P P P+ +
Sbjct: 68 ATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAP----PAKNTSPGPVSSPGRASGT 123
Query: 570 RPPRPHGRRTGGPQATQPRPPARAQATQGGRE------GQARTLGPAAPTVDSNLSSEAR 623
P P G++ G + + AR +AT+ + + T GP T ++ +R
Sbjct: 124 TRPGPLGQK--GLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSR 181
Query: 624 PVTSFLSL---SQVSGPQLPGEGEEEEEGEDDGAPGDEAASEDSEEAAGPALGR 674
+ + L + + P+ P EG + +ASE S PA R
Sbjct: 182 AAGTEVGLPRPAPSARPRPPTEGPRKSV---------SSASEHSTTEPSPAARR 226
Score = 37.4 bits (85), Expect = 0.074
Identities = 47/150 (31%), Positives = 54/150 (36%), Gaps = 47/150 (31%)
Query: 452 AAPPRSGPQSP----APAAPAQPGA----TLAPP--TPPRPRDGGTPRHSRALSWAARAA 501
++P RSGP + APA P+QP L PP TPPR AA A
Sbjct: 250 SSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKD-------------AAPAL 296
Query: 502 RPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLP 561
PL P P +P P P A+ PA P PP PLP
Sbjct: 297 GPLSSSPLATPSPSGTKARPVP--------PPDNAATPLPATLPPSPPLA------TPLP 342
Query: 562 RVQLRAPPRPPRPHGRRTGGPQATQPRPPA 591
APP P P +T P PPA
Sbjct: 343 L----APPSPSAPPSLQT------LPSPPA 362
Score = 35.0 bits (79), Expect = 0.37
Identities = 42/151 (27%), Positives = 49/151 (32%), Gaps = 28/151 (18%)
Query: 454 PPRSGPQS------------PAPAAPAQP--GATLAPPTPPRPRDGGTPRHSRALSWAAR 499
PP GP+ P+PAA +P G L P TP S A S +
Sbjct: 200 PPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPS- 258
Query: 500 AARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRP 559
R P PA P + +RP Q PR A A P P P
Sbjct: 259 ---------ARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSP 309
Query: 560 LPRVQLRAPPRPPRPHGRRTGGPQATQPRPP 590
+A P PP P T P P PP
Sbjct: 310 ---SGTKARPVPP-PDNAATPLPATLPPSPP 336
>gi|239748855 PREDICTED: chromosome 6 open reading frame 132 [Homo
sapiens]
Length = 1188
Score = 62.8 bits (151), Expect = 2e-09
Identities = 69/247 (27%), Positives = 91/247 (36%), Gaps = 39/247 (15%)
Query: 431 PDDFLDDEDEG---------ELLDSLEPTEAAPPRSGPQSPAPAAPAQPGATLAPPTPPR 481
PDDF D E G L S+ + P + G P P PG PP
Sbjct: 100 PDDFADKEVTGTSSLVNGNLRLYSSVG--DLRPGQYGQDLLIPPPP--PGPAPGPPQDIS 155
Query: 482 PRDGGTPRHSRALSWAARAARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAP 541
GG+P S + A P PL L PPP P++ PPP V P +SP P
Sbjct: 156 EPPGGSPLPSPP----STAPPPPPLLL--EPPPPPSMAPPPPPVLEALSPPHTLSSPSIP 209
Query: 542 APRAPWPPFPGVFLHPRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPA-----RAQAT 596
P PP P + P P V APP P PH T+ PP ++
Sbjct: 210 TPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASPH------TVGTRLFPPGGVTKWKSDVA 263
Query: 597 QGGREGQARTLGP---AAPTVDSNLSSEARPVTSFLSLSQVSGP------QLPGEGEEEE 647
GR+ +A P A S L P +F +V P +P + +E
Sbjct: 264 LNGRQAEATRASPPRSPAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEA 323
Query: 648 EGEDDGA 654
+++GA
Sbjct: 324 PRKEEGA 330
Score = 33.1 bits (74), Expect = 1.4
Identities = 48/207 (23%), Positives = 67/207 (32%), Gaps = 27/207 (13%)
Query: 436 DDEDEGELLDSLEPTEAAPPRSGP---QSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSR 492
D E + L+ T A PR G Q+ A P L PP PP P
Sbjct: 355 DRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPP----- 409
Query: 493 ALSWAARAARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPG 552
AA PLP A PP + P P + P P+P P
Sbjct: 410 ----LPPAAPPLPCAQKAAHPPAGFTKTPKSS------SPALKPKPNPPSPENTASSAPV 459
Query: 553 VFLHPRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLGPAAP 612
+ P + + LR RR + +P P Q+ +G + GP P
Sbjct: 460 DWRDPSQMEK--LRNELAAYLCGSRREDRFLSHRPGPTVAPQSKEGKK-------GPRLP 510
Query: 613 TVDSNLSSEARPVTSFLSLSQVSGPQL 639
++ LS A+ + + G L
Sbjct: 511 EKETLLSLPAKDTPPGVPEKSLGGSSL 537
Score = 30.4 bits (67), Expect = 9.1
Identities = 57/218 (26%), Positives = 73/218 (33%), Gaps = 33/218 (15%)
Query: 446 SLEPTEAAPPRSGPQS-PAPAAPAQPGATLAPPTPPRPRDG-GTPRHSRALSWAARAARP 503
SL+P P P++ P PA P P ATL P TPP+ G TP L + P
Sbjct: 630 SLQPKAMLGPAIPPKATPEPAIP--PKATLWPATPPKATLGPATP-----LKATSGPTTP 682
Query: 504 LPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRV 563
L G A + G P PA + P
Sbjct: 683 LKATSGPAIASTATTLPTTTSQLMAEKDSGPAGQPEKPASQEVSTP-------------S 729
Query: 564 QLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLGPAAPTVDSNLSSEAR 623
Q R P T G +++ PP + + GG G+ L S+LS E
Sbjct: 730 QARGEGSPSEATRLPTQGARSSAAFPP---KTSPGG--GEVPCL-YKPHCHQSSLSREVA 783
Query: 624 PVTSFLSLSQVSGPQLPGEGEEEEEGEDDGAPGDEAAS 661
V L+ +GP GE E E G P AS
Sbjct: 784 VVMPTLARGGAAGP-----GEPVEVKEPPGLPAKPPAS 816
>gi|239742884 PREDICTED: hypothetical protein LOC647024 [Homo
sapiens]
Length = 1188
Score = 62.8 bits (151), Expect = 2e-09
Identities = 69/247 (27%), Positives = 91/247 (36%), Gaps = 39/247 (15%)
Query: 431 PDDFLDDEDEG---------ELLDSLEPTEAAPPRSGPQSPAPAAPAQPGATLAPPTPPR 481
PDDF D E G L S+ + P + G P P PG PP
Sbjct: 100 PDDFADKEVTGTSSLVNGNLRLYSSVG--DLRPGQYGQDLLIPPPP--PGPAPGPPQDIS 155
Query: 482 PRDGGTPRHSRALSWAARAARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAP 541
GG+P S + A P PL L PPP P++ PPP V P +SP P
Sbjct: 156 EPPGGSPLPSPP----STAPPPPPLLL--EPPPPPSMAPPPPPVLEALSPPHTLSSPSIP 209
Query: 542 APRAPWPPFPGVFLHPRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPA-----RAQAT 596
P PP P + P P V APP P PH T+ PP ++
Sbjct: 210 TPPDFIPPAPPLAFLAPPPPPVPAPAPPAPASPH------TVGTRLFPPGGVTKWKSDVA 263
Query: 597 QGGREGQARTLGP---AAPTVDSNLSSEARPVTSFLSLSQVSGP------QLPGEGEEEE 647
GR+ +A P A S L P +F +V P +P + +E
Sbjct: 264 LNGRQAEATRASPPRSPAEPKGSALGPNPEPHLTFPRSFKVPPPTPVRTSSIPVQEAQEA 323
Query: 648 EGEDDGA 654
+++GA
Sbjct: 324 PRKEEGA 330
Score = 33.1 bits (74), Expect = 1.4
Identities = 48/207 (23%), Positives = 67/207 (32%), Gaps = 27/207 (13%)
Query: 436 DDEDEGELLDSLEPTEAAPPRSGP---QSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSR 492
D E + L+ T A PR G Q+ A P L PP PP P
Sbjct: 355 DRAPEPDCPGELKATAPASPRLGQSQSQADERAGTPPPAPPLPPPAPPLPPPAPP----- 409
Query: 493 ALSWAARAARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPG 552
AA PLP A PP + P P + P P+P P
Sbjct: 410 ----LPPAAPPLPCAQKAAHPPAGFTKTPKSS------SPALKPKPNPPSPENTASSAPV 459
Query: 553 VFLHPRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLGPAAP 612
+ P + + LR RR + +P P Q+ +G + GP P
Sbjct: 460 DWRDPSQMEK--LRNELAAYLCGSRREDRFLSHRPGPTVAPQSKEGKK-------GPRLP 510
Query: 613 TVDSNLSSEARPVTSFLSLSQVSGPQL 639
++ LS A+ + + G L
Sbjct: 511 EKETLLSLPAKDTPPGVPEKSLGGSSL 537
Score = 30.4 bits (67), Expect = 9.1
Identities = 57/218 (26%), Positives = 73/218 (33%), Gaps = 33/218 (15%)
Query: 446 SLEPTEAAPPRSGPQS-PAPAAPAQPGATLAPPTPPRPRDG-GTPRHSRALSWAARAARP 503
SL+P P P++ P PA P P ATL P TPP+ G TP L + P
Sbjct: 630 SLQPKAMLGPAIPPKATPEPAIP--PKATLWPATPPKATLGPATP-----LKATSGPTTP 682
Query: 504 LPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRV 563
L G A + G P PA + P
Sbjct: 683 LKATSGPAIASTATTLPTTTSQLMAEKDSGPAGQPEKPASQEVSTP-------------S 729
Query: 564 QLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLGPAAPTVDSNLSSEAR 623
Q R P T G +++ PP + + GG G+ L S+LS E
Sbjct: 730 QARGEGSPSEATRLPTQGARSSAAFPP---KTSPGG--GEVPCL-YKPHCHQSSLSREVA 783
Query: 624 PVTSFLSLSQVSGPQLPGEGEEEEEGEDDGAPGDEAAS 661
V L+ +GP GE E E G P AS
Sbjct: 784 VVMPTLARGGAAGP-----GEPVEVKEPPGLPAKPPAS 816
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 62.0 bits (149), Expect = 3e-09
Identities = 64/224 (28%), Positives = 85/224 (37%), Gaps = 43/224 (19%)
Query: 454 PPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFLGRAPP 513
PP+ GP P P Q PP RP G +H L A PLP R P
Sbjct: 462 PPQGGPPQPGPGPQRQ-----GPPLQQRPPPQGQ-QHLSGLG--PPAGSPLPQ---RLPS 510
Query: 514 PRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQLRAPPRPPR 573
P A +QP + G+++ P A P AP P R PP P
Sbjct: 511 PTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAP------------PAAR-----PPASPS 553
Query: 574 PHGRRTGGPQATQ------PRPPARAQATQGGREGQARTLGPAAPTVDSNLSSEARPVTS 627
P R+ G PQAT+ P PP + A GG++ Q P P + +S+A PV
Sbjct: 554 PQ-RQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPR 612
Query: 628 FLSLSQVSGPQLPGEGEEEEEGEDDGAPGDEAASEDSEEAAGPA 671
+GP + G G P + A + S++ PA
Sbjct: 613 -------TGPPTTQQPRPSGPG-PAGRPKPQLAQKPSQDVPPPA 648
Score = 47.4 bits (111), Expect = 7e-05
Identities = 43/147 (29%), Positives = 55/147 (37%), Gaps = 17/147 (11%)
Query: 450 TEAAPPRSGP---QSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPL 506
++AAPP G P P P A P +P R G P+ +R S + P P
Sbjct: 520 SQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTS----VSGPAPP 575
Query: 507 FLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRA-------PWPPFPGVFLHPRP 559
APP + PP K P ++AS P PR P P PG RP
Sbjct: 576 KASGAPPGGQQRQGPPQKP-PGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPA--GRP 632
Query: 560 LPRVQLRAPPRPPRPHGRRTGGPQATQ 586
P++ + P P GGP Q
Sbjct: 633 KPQLAQKPSQDVPPPATAAAGGPPHPQ 659
Score = 31.2 bits (69), Expect = 5.3
Identities = 39/137 (28%), Positives = 53/137 (38%), Gaps = 26/137 (18%)
Query: 451 EAAPPRSGPQSPAPAAPAQPGATLAPP------TPPR--PRDGGTPRHSRALSWAARAA- 501
+A PP++ Q+ + PA P A+ APP PP+ P G R + R
Sbjct: 557 QAGPPQATRQTSV-SGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGP 615
Query: 502 ----RPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHP 557
+P P G A P+P + Q +P Q P A A A PP P +
Sbjct: 616 PTTQQPRPSGPGPAGRPKPQLAQ----------KPSQDVPPPATA-AAGGPPHPQL-NKS 663
Query: 558 RPLPRVQLRAPPRPPRP 574
+ L P PPRP
Sbjct: 664 QSLTNAFNLPEPAPPRP 680
>gi|19924097 synapsin I isoform Ib [Homo sapiens]
Length = 669
Score = 62.0 bits (149), Expect = 3e-09
Identities = 64/224 (28%), Positives = 85/224 (37%), Gaps = 43/224 (19%)
Query: 454 PPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFLGRAPP 513
PP+ GP P P Q PP RP G +H L A PLP R P
Sbjct: 462 PPQGGPPQPGPGPQRQ-----GPPLQQRPPPQGQ-QHLSGLG--PPAGSPLPQ---RLPS 510
Query: 514 PRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQLRAPPRPPR 573
P A +QP + G+++ P A P AP P R PP P
Sbjct: 511 PTSAPQQPASQAAPPTQGQGRQSRPVAGGPGAP------------PAAR-----PPASPS 553
Query: 574 PHGRRTGGPQATQ------PRPPARAQATQGGREGQARTLGPAAPTVDSNLSSEARPVTS 627
P R+ G PQAT+ P PP + A GG++ Q P P + +S+A PV
Sbjct: 554 PQ-RQAGPPQATRQTSVSGPAPPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPR 612
Query: 628 FLSLSQVSGPQLPGEGEEEEEGEDDGAPGDEAASEDSEEAAGPA 671
+GP + G G P + A + S++ PA
Sbjct: 613 -------TGPPTTQQPRPSGPG-PAGRPKPQLAQKPSQDVPPPA 648
Score = 50.1 bits (118), Expect = 1e-05
Identities = 47/156 (30%), Positives = 61/156 (39%), Gaps = 18/156 (11%)
Query: 450 TEAAPPRSGP---QSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPL 506
++AAPP G P P P A P +P R G P+ +R S + P P
Sbjct: 520 SQAAPPTQGQGRQSRPVAGGPGAPPAARPPASPSPQRQAGPPQATRQTS----VSGPAPP 575
Query: 507 FLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRA-------PWPPFPGVFLHPRP 559
APP + PP K P ++AS P PR P P PG RP
Sbjct: 576 KASGAPPGGQQRQGPPQKP-PGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPA--GRP 632
Query: 560 LPRVQLRAPPRPPRPHGRRTGGPQATQPR-PPARAQ 594
P++ + P P GGP Q + PA+AQ
Sbjct: 633 KPQLAQKPSQDVPPPATAAAGGPPHPQLKASPAQAQ 668
>gi|74271903 chondroitin sulfate synthase 3 [Homo sapiens]
Length = 882
Score = 61.2 bits (147), Expect = 5e-09
Identities = 40/145 (27%), Positives = 68/145 (46%), Gaps = 16/145 (11%)
Query: 889 GNFERSAGLQAGVDAVEDASSIVFLCDLHIHFPPNILDGIRKHCVEGRLAFAPVVMR--- 945
G F R GL+ A D +++ CD+ + F + L R + ++G+ + P++
Sbjct: 693 GEFSRGLGLEMA-SAQFDNDTLLLFCDVDLIFREDFLQRCRDNTIQGQQVYYPIIFSQYD 751
Query: 946 ---LSCGSSPRDPH-------GYWEVNGFGLFGIYKSDFDRVGGMNTEEFRDQWGGEDWE 995
+ G+ P D + G+W G+G+ IYKSD GG +T WG ED +
Sbjct: 752 PKVTNGGNPPTDDYFIFSKKTGFWRDYGYGITCIYKSDLLGAGGFDTS--IQGWGLEDVD 809
Query: 996 LLDRVLQAGLEVERLRLRNFYHHYH 1020
L ++V+ +GL R + H +H
Sbjct: 810 LYNKVILSGLRPFRSQEVGVVHIFH 834
Score = 37.7 bits (86), Expect = 0.057
Identities = 32/104 (30%), Positives = 44/104 (42%), Gaps = 5/104 (4%)
Query: 575 HGRRTGGPQATQPRPPARAQATQGGREGQARTLGPAAPTVDSNLSSEARP-VTSFLSLSQ 633
+GR GP+A +P + Q+ R Q ++ PA + EA P +TSF S
Sbjct: 48 YGRSAAGPRAGAQQPLPQPQS----RPRQEQSPPPARQDLQGPPLPEAAPGITSFRSSPW 103
Query: 634 VSGPQLPGEGEEEEEGEDDGAPGDEAASEDSEEAAGPALGRWRE 677
P L E G PG AA + EE G A G+ R+
Sbjct: 104 QQPPPLQQRRRGREPEGATGLPGAPAAEGEPEEEDGGAAGQRRD 147
Score = 32.0 bits (71), Expect = 3.1
Identities = 41/150 (27%), Positives = 50/150 (33%), Gaps = 22/150 (14%)
Query: 441 GELLDSLEPTEAAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARA 500
G L S AA PR+G Q P P ++P +PP P R G P A +
Sbjct: 41 GSSLCSYYGRSAAGPRAGAQQPLPQPQSRPRQEQSPP-PARQDLQGPPLPEAAPGITSFR 99
Query: 501 ARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPL 560
+ P +QPPP R R + A+ AP A P
Sbjct: 100 SSPW--------------QQPPPLQQRRRGREPEGATGLPGAPAAEGEP------EEEDG 139
Query: 561 PRVQLRAPPRPPRPH-GRRTGGPQATQPRP 589
R RP H G GG A RP
Sbjct: 140 GAAGQRRDGRPGSSHNGSGDGGAAAPSARP 169
>gi|11386183 WAS protein family, member 2 [Homo sapiens]
Length = 498
Score = 60.8 bits (146), Expect = 6e-09
Identities = 61/220 (27%), Positives = 78/220 (35%), Gaps = 45/220 (20%)
Query: 452 AAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFLGRA 511
A P RS SP+ PA P + PP P+ G P P P
Sbjct: 287 AGPKRSSVVSPSHPPPAPPLGS-----PPGPKPGFAPP-------------PAP-----P 323
Query: 512 PPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQLRAPPRP 571
PPP P + PPP V PG P P+ +PP P P P P P P
Sbjct: 324 PPPPPMIGIPPPPPPVGFGSPGTPPPPSPPS----FPPHPDFAAPPPPPPPPAADYPTLP 379
Query: 572 PRPHGRRTGG--PQATQPRPPARAQATQGGREGQARTLGPAAPTVDSNLSSEARPVTSFL 629
P P + TGG P P PP G +GQ P + LS +P +S
Sbjct: 380 PPPLSQPTGGAPPPPPPPPPPGPPPPPFTGADGQ--------PAIPPPLSDTTKPKSSLP 431
Query: 630 SLSQVSGPQLPG--------EGEEEEEGEDDGAPGDEAAS 661
++S L EE+ E E G++ A+
Sbjct: 432 AVSDARSDLLSAIRQGFQLRRVEEQREQEKRDVVGNDVAT 471
Score = 36.6 bits (83), Expect = 0.13
Identities = 33/126 (26%), Positives = 38/126 (30%), Gaps = 32/126 (25%)
Query: 449 PTEAAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFL 508
P P + P P+ P P PP PP P A + PL
Sbjct: 338 PVGFGSPGTPPPPSPPSFPPHPDFAAPPPPPPPP----------AADYPTLPPPPLSQPT 387
Query: 509 GRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQLRAP 568
G APPP PPP P P P PPF G P P +
Sbjct: 388 GGAPPP------PPP----------------PPPPGPPPPPFTGADGQPAIPPPLSDTTK 425
Query: 569 PRPPRP 574
P+ P
Sbjct: 426 PKSSLP 431
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 60.1 bits (144), Expect = 1e-08
Identities = 54/147 (36%), Positives = 57/147 (38%), Gaps = 28/147 (19%)
Query: 449 PTEAAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFL 508
P A P GP P PA P L PP PP P G P + L P PL
Sbjct: 218 PGPAGP--GGPPPPFPAGQTPPRPPLGPPGPPGP--PGPPPPGQVL--------PPPL-- 263
Query: 509 GRAPPPRPAVEQPPPKVYVTRVRPGQ--RASPRAPAPRAPWPPFPGVFLHPRPLPRVQLR 566
A PP PPP ++ PGQ P P P P PP PG P P P Q
Sbjct: 264 --AGPPNRGDRPPPPVLF-----PGQPFGQPPLGPLPPGPPPPVPGYGPPPGPPPPQQGP 316
Query: 567 APPR---PPRPHGRRTGGPQATQPRPP 590
PP PPRP G GP T PP
Sbjct: 317 PPPPGPFPPRPPGPL--GPPLTLAPPP 341
Score = 56.6 bits (135), Expect = 1e-07
Identities = 59/173 (34%), Positives = 61/173 (35%), Gaps = 27/173 (15%)
Query: 450 TEAAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPL----- 504
T PP P P P P PG L PP P G P PL
Sbjct: 235 TPPRPPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQPPLGPLPP 294
Query: 505 ---PLFLGRAPPPRPAVEQ----PPPKVYVTRVRPGQRASP--RAPAPRAPWPPFPGVFL 555
P G PPP P Q PPP + R PG P AP P P PP PG
Sbjct: 295 GPPPPVPGYGPPPGPPPPQQGPPPPPGPFPPR-PPGPLGPPLTLAPPPHLPGPP-PGA-- 350
Query: 556 HPRPLPRVQLRAPPRPPRPHGRRTG---GPQATQP--RPPARAQATQG--GRE 601
P P P V P PP G T GP T P RPP + G GRE
Sbjct: 351 -PPPAPHVNPAFFP-PPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDYGPPGRE 401
Score = 44.3 bits (103), Expect = 6e-04
Identities = 27/78 (34%), Positives = 31/78 (39%), Gaps = 3/78 (3%)
Query: 449 PTEAAPPRSGPQSPAPAAPAQPGATLAPPTP-PRPRDGGTP--RHSRALSWAARAARPLP 505
P + PP GP P P P P TLAPP P P G P H + +P
Sbjct: 312 PQQGPPPPPGPFPPRPPGPLGPPLTLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMP 371
Query: 506 LFLGRAPPPRPAVEQPPP 523
R PPP +PPP
Sbjct: 372 TSDSRGPPPTDPYGRPPP 389
Score = 33.5 bits (75), Expect = 1.1
Identities = 34/109 (31%), Positives = 37/109 (33%), Gaps = 14/109 (12%)
Query: 509 GRAPPPRPAVEQPPPKVYVTRVR-----PGQRASPRAPAPRAPWPPFPGVFLHPRPLPRV 563
G+A PP + P+ R R PG P P P PPFP PRP
Sbjct: 184 GKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPPRP---- 239
Query: 564 QLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLGPAAP 612
P PP P G G P Q PP A G L P P
Sbjct: 240 ----PLGPPGPPG-PPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQP 283
Score = 30.4 bits (67), Expect = 9.1
Identities = 33/125 (26%), Positives = 37/125 (29%), Gaps = 26/125 (20%)
Query: 449 PTEAAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFL 508
P P GP P P PG P PPRP PL L
Sbjct: 299 PVPGYGPPPGPPPPQQGPPPPPG-----PFPPRP------------------PGPLGPPL 335
Query: 509 GRAPPPR---PAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQL 565
APPP P PPP +V + P + PP + P P R
Sbjct: 336 TLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDRGDY 395
Query: 566 RAPPR 570
P R
Sbjct: 396 GPPGR 400
>gi|4826998 splicing factor proline/glutamine rich (polypyrimidine
tract binding protein associated) [Homo sapiens]
Length = 707
Score = 59.3 bits (142), Expect = 2e-08
Identities = 84/300 (28%), Positives = 103/300 (34%), Gaps = 38/300 (12%)
Query: 449 PTEAAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFL 508
P P +SGP+ P P P PP P P+ P H P P
Sbjct: 46 PMGPGPGQSGPKPPIPPPPPHQQQQQPPPQQPPPQQ--PPPHQPP-------PHPQPHQQ 96
Query: 509 GRAPPP-----RPAVEQPP-PKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPR 562
+ PPP +P V Q P P V P ++P A P + PP G P P P
Sbjct: 97 QQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGPTPTPPPA 156
Query: 563 VQLR---APPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLGPAAPTVDSNLS 619
V APP P G T PQA P PP A G G + GP P +
Sbjct: 157 VTSAPPGAPPPTPPSSGVPTTPPQAGGPPPP--PAAVPGPGPGPKQGPGPGGPK-GGKMP 213
Query: 620 SEARPVTSFLSLSQVSG-PQLPGEGEEEEEGEDDGAPGDEAASEDSEEAAGPALGRWRED 678
+P LS G P+ P G E G P GP G E+
Sbjct: 214 GGPKP-GGGPGLSTPGGHPKPPHRGGGEPRGGRQHHPPYHQQHHQGPPPGGP--GGRSEE 270
Query: 679 AIDWQRTFSVGAVDFELLRSDWNDL---RCNV-SGNLQLPEAEAVDVTAQYMERLNARHG 734
I F + LLR RC + GNL D+T +RL A++G
Sbjct: 271 KISDSEGFK---ANLSLLRRPGEKTYTQRCRLFVGNL------PADITEDEFKRLFAKYG 321
Score = 36.2 bits (82), Expect = 0.17
Identities = 31/119 (26%), Positives = 45/119 (37%), Gaps = 5/119 (4%)
Query: 521 PPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQLRAPPRPPRPH--GRR 578
PPP + + + R P P+ P PP P +P P+ + PP+ P PH
Sbjct: 34 PPPGMGLNQNRGPMGPGPGQSGPKPPIPPPPPHQQQQQPPPQ---QPPPQQPPPHQPPPH 90
Query: 579 TGGPQATQPRPPARAQATQGGREGQARTLGPAAPTVDSNLSSEARPVTSFLSLSQVSGP 637
Q QP PP + + +G G + S+ + A P TS GP
Sbjct: 91 PQPHQQQQPPPPPQDSSKPVVAQGPGPAPGVGSAPPASSSAPPATPPTSGAPPGSGPGP 149
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 59.3 bits (142), Expect = 2e-08
Identities = 53/224 (23%), Positives = 66/224 (29%), Gaps = 33/224 (14%)
Query: 454 PPRSGPQSPAPAAPAQPGATLAPP----------TPPRPRDGGTPRHSRALSWAARAARP 503
PP+ P +PA P+ G PP TPP P+ G + A P
Sbjct: 1144 PPKGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPP 1203
Query: 504 LPLFLGRAPPPRPAVEQP---PPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPL 560
P P P+ A P PP P + +P PA P P P+
Sbjct: 1204 SPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGPATPPPKGA 1263
Query: 561 PRVQLRAPPR--------------------PPRPHGRRTGGPQATQPRPPARAQATQGGR 600
P PP PP P G P P PPA + G
Sbjct: 1264 PTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGS 1323
Query: 601 EGQARTLGPAAPTVDSNLSSEARPVTSFLSLSQVSGPQLPGEGE 644
G G P + S + P + S GP P E
Sbjct: 1324 PGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKE 1367
Score = 58.5 bits (140), Expect = 3e-08
Identities = 61/208 (29%), Positives = 75/208 (36%), Gaps = 28/208 (13%)
Query: 454 PPRSGPQSPAPAAPAQPGATLAPP----------TPPRPRDGGTPRHSRALSWAARAARP 503
PP+ P PA P+ G PP TPP P+ G + A P
Sbjct: 1259 PPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPP 1318
Query: 504 LPLFLGRAPPPR-----PAVEQPPPKVYVT--RVRPGQRASPRAPAPR-APWPP--FPGV 553
P PPP+ PAV P PK T P + P P+ + P PP P
Sbjct: 1319 SPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSH 1378
Query: 554 FLHPRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQAR-TLGPAAP 612
P P R P P P G T A P P +A AT REG A + G P
Sbjct: 1379 KGGPAMTPPSPKRG-PAIPSPKGDPTS--PAVIPLSPKKAPATPVTREGAATPSKGDLTP 1435
Query: 613 TVDSNLSSEARPVTSFLSLSQVSGPQLP 640
+ +S + P TS + GP P
Sbjct: 1436 PAVTPVSLKKAPATS----APKGGPATP 1459
Score = 52.0 bits (123), Expect = 3e-06
Identities = 77/279 (27%), Positives = 98/279 (35%), Gaps = 66/279 (23%)
Query: 449 PTEAAPP--RSGPQSPAP-AAPAQPGATLAPPTP-------PRPRDGGTPRHSRALS-WA 497
P A PP + GP +P+P AP P T PP+P P P+ TP + S
Sbjct: 988 PPAATPPSPKGGPATPSPKGAPTPPAVT--PPSPKGSPAATPFPKGASTPPAATPPSPKG 1045
Query: 498 ARAARPLPLFLGRAPPPRPAVEQPPPK------------VYVTRVRPGQRASPRAPAPR- 544
+ AA PLP + P PA P PK P + P P+P+
Sbjct: 1046 SPAATPLP----KGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKG 1101
Query: 545 -----APWPPFP--GVFLHP-RPLPRVQLRAPPRP------PRPHGRRTGGPQATQPRP- 589
A PP P G+ P + P PP P P P G T P AT P P
Sbjct: 1102 APMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGAPT-TPAATPPSPK 1160
Query: 590 -----------PARAQATQGGREGQARTLGP-AAPTVDSNLSSEARPVTSFLSLSQVSGP 637
P AT +G T P APT + ++ P + S P
Sbjct: 1161 GGLATPPPKGAPTTPAATPPSPKGGLATPSPKGAPTTPA--ATPPSPKGGLATPSPKGAP 1218
Query: 638 QLPGEGEEEEEG-----EDDGAPGDEAASEDSEEAAGPA 671
P +G GAP AA+ S + GPA
Sbjct: 1219 TTPAATPPSPKGGLATPSPKGAPTTPAATPPSPK-GGPA 1256
Score = 50.4 bits (119), Expect = 8e-06
Identities = 71/257 (27%), Positives = 94/257 (36%), Gaps = 39/257 (15%)
Query: 445 DSLEPTEAAPPRSGPQSPAPAA--PAQP-GATLAP---PTP-----PRPRDGGT---PRH 490
DS T + P S +P P+A P P G TL P PTP P P++G P+
Sbjct: 848 DSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQ 907
Query: 491 SRALSWAARA-----ARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRA 545
+ ALS + + A P P + +P P+ A P + P + AP P A
Sbjct: 908 APALSMTSSSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKGGPATPSPKWAPTPPA 967
Query: 546 PWPPFP---GVFLHPRPLPRVQLRAPPRP------PRPHGRRTGGPQATQPRPPARAQAT 596
PP P P+ P PP P P P G T P T P P AT
Sbjct: 968 ATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPT-PPAVTPPSPKGSPAAT 1026
Query: 597 QGGREGQARTLGPAAPTVDSNLSSEARPVTSFLSLSQVSGP--QLPGEGEEEEEGEDDGA 654
+ G + P + S + P + L + P LP GA
Sbjct: 1027 PFPK-------GASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGA 1079
Query: 655 PGDEAASEDSEEAAGPA 671
P AA+ S + GPA
Sbjct: 1080 PTPPAATPPSPK-GGPA 1095
Score = 50.4 bits (119), Expect = 8e-06
Identities = 63/222 (28%), Positives = 79/222 (35%), Gaps = 25/222 (11%)
Query: 455 PRSGPQSPAP-AAPAQPGATLAPPTP------PRPRDGGTPRHSRALSWAARAARPLPLF 507
P+ P SP+P AP P AT PP+P P P+ TP + S A P P
Sbjct: 927 PKGIPASPSPKGAPTPPAAT--PPSPKGGPATPSPKWAPTPPAATPPSPKGGPATPSP-- 982
Query: 508 LGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQLRA 567
+ P PA P PK P + AP P A PP P P P+
Sbjct: 983 --KGAPTPPAATPPSPKG-----GPATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTP 1035
Query: 568 P-PRPPRPHG--RRTGGPQATQPRPPARAQATQGGREGQARTLGPAAP--TVDSNLSSEA 622
P PP P G T P+ P A + +GG + P P T S A
Sbjct: 1036 PAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGGPATPSLKGAPTPPAATPPSPKGGPA 1095
Query: 623 RPVTSFLSLSQVSGPQLPGEGEEEEEGEDDGAPGDEAASEDS 664
P + + P P G + GAP AA+ S
Sbjct: 1096 TPSPKGAPMPPAATPPSPKGGLATPPHK--GAPTTPAATPPS 1135
Score = 44.7 bits (104), Expect = 5e-04
Identities = 45/177 (25%), Positives = 61/177 (34%), Gaps = 28/177 (15%)
Query: 453 APPRSGPQSPAPAAPAQPGATLAPP----------TPPRPRDGGTPRHSRALSWAARAAR 502
+PP+ P PA P+ G+ PP TPP P+ GTP L +++
Sbjct: 1304 SPPKGAPTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPK--GTP----TLPATTPSSK 1357
Query: 503 PLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPR 562
P P P P K P + P P+P+ P P V +P
Sbjct: 1358 GGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGD-PTSPAV------IPL 1410
Query: 563 VQLRAPPRPPRPHGRRTGG-----PQATQPRPPARAQATQGGREGQARTLGPAAPTV 614
+AP P G T P A P +A AT + G A PT+
Sbjct: 1411 SPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTL 1467
Score = 44.3 bits (103), Expect = 6e-04
Identities = 54/195 (27%), Positives = 67/195 (34%), Gaps = 16/195 (8%)
Query: 453 APPRSGPQSPAPAAPAQPG-ATLAPPTPPRPRDGGTPRHSRALSWAARA-ARPLPLFLGR 510
AP S P+ PA P+ G TL TPP P++ P+ S +A A P P+
Sbjct: 1446 APATSAPKG-GPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPM---- 1500
Query: 511 APPPRPAVEQPPPKVYVTRVRPGQRASPRAP-----APRAPWPPFPGVFLHPRPLPRVQL 565
P PAV PK P R P AP + + P P L P +
Sbjct: 1501 GAPTLPAVIPSSPK--EVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSP 1558
Query: 566 RAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLGPAAPTVDSNLSSEARPV 625
+ P P P PPA +T G L P P V S EA
Sbjct: 1559 KKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELLIP--PAVTSPSPKEAPTP 1616
Query: 626 TSFLSLSQVSGPQLP 640
+ S GP P
Sbjct: 1617 PAVTPPSPEKGPATP 1631
Score = 34.7 bits (78), Expect = 0.48
Identities = 48/180 (26%), Positives = 65/180 (36%), Gaps = 35/180 (19%)
Query: 446 SLEPTEA-APPRSGPQSP--APAAPAQPGATLAPP-TPPRPRDGGTPRHSRALSWAA--- 498
S P EA PP P SP PA PA G +PP TP +D T S A
Sbjct: 1607 SPSPKEAPTPPAVTPPSPEKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVP 1666
Query: 499 RAARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPR 558
+A++ LP ++ P + V P ++P AP P
Sbjct: 1667 QASKGLP------------AKKGPTALKEVLVAPAPESTPIITAPTRKGP---------- 1704
Query: 559 PLPRVQLRAPPRPPRPHGRR-TGGPQAT-QPRPPARAQ----ATQGGREGQARTLGPAAP 612
+ +PP P P + + GP +T P P Q T G++ GP AP
Sbjct: 1705 QTKKSSATSPPICPDPSAKNGSKGPLSTVAPAPLLPVQKDSSKTAKGKDASHSPKGPLAP 1764
Score = 32.3 bits (72), Expect = 2.4
Identities = 54/207 (26%), Positives = 72/207 (34%), Gaps = 35/207 (16%)
Query: 441 GELLDSLEPTEAAPPRSG------PQSPA---PAAPAQPGATLAPPTPPRPRDGGTPRHS 491
GE +++ TE P+ P S A AA QPG TL PP P P+
Sbjct: 3 GEATETVPATEQELPQPQAETAVLPMSSALSVTAALGQPGPTLPPPCSPAPQ-------- 54
Query: 492 RALSWAARAARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPA--PRAPWPP 549
+ AA A P P A P +E P P+ P +P AP P PP
Sbjct: 55 QCPLSAANQASPFPSPSTIASTP---LEVPFPQSSSGTALP-LGTAPEAPTFLPNLIGPP 110
Query: 550 F-PGVFLHPRPLPRVQLRAPPRPPRPHGRRTGGPQATQ----------PRPPARAQATQG 598
P P+ L+ P P P + Q PP+ A A G
Sbjct: 111 ISPAALALASPMIAPTLKGTPSSSAPLALVALAPHSVQKSSAFPPNLLTSPPSVAVAESG 170
Query: 599 GREGQARTLGPAAPTVDSN-LSSEARP 624
+ + P+ P + N + SE P
Sbjct: 171 SVITLSAPIAPSEPKTNLNKVPSEVVP 197
Score = 32.3 bits (72), Expect = 2.4
Identities = 58/218 (26%), Positives = 76/218 (34%), Gaps = 44/218 (20%)
Query: 448 EPT-EAAPPRSGPQSP-------------APAAPAQPGA-TLAPPTPPRPRD-GGTP--R 489
+PT A P S + P APA PA GA TL P P++ TP R
Sbjct: 1464 DPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSR 1523
Query: 490 HSRALSWAARAARPLPLFLGRAP-----PPRPAVEQP--PPKVYVTRVRPGQRASPRAPA 542
A ++ P L AP PP V P P + + P +S A +
Sbjct: 1524 RDPIAPTATLLSKKTPATL--APKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASS 1581
Query: 543 PRAPWP------PFPGVFLHP----RPLPRVQLRAPP--RPPRPH-GRRTGGPQATQPRP 589
P A P P P L P P P+ + PP PP P G T P+ T P
Sbjct: 1582 PPAVTPSTYKGAPSPKELLIPPAVTSPSPK-EAPTPPAVTPPSPEKGPATPAPKGTPTSP 1640
Query: 590 PARAQATQGGREGQART---LGPAAPTVDSNLSSEARP 624
P + + A +G P L ++ P
Sbjct: 1641 PVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGP 1678
Score = 32.0 bits (71), Expect = 3.1
Identities = 27/85 (31%), Positives = 34/85 (40%), Gaps = 16/85 (18%)
Query: 449 PTEAAPPRSG--PQSP-----APAAPAQPGAT--LAPPTPPRPRDGGTPRHSRALSWAAR 499
P PP+ P SP +P+ P P L P PP P GG P S ++
Sbjct: 1806 PVPTLPPKQQFLPSSPGLVLESPSKPLAPADEDELLPLIPPEPISGGVPFQSVLVN---- 1861
Query: 500 AARPLPLFLGRAPPPRPAVEQPPPK 524
P P G P P P+ +QP K
Sbjct: 1862 --MPTPKSAG-IPVPTPSAKQPVTK 1883
Score = 31.2 bits (69), Expect = 5.3
Identities = 50/201 (24%), Positives = 61/201 (30%), Gaps = 44/201 (21%)
Query: 446 SLEPTEAAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLP 505
+L P EA P + PA P AP TP P + + A + + L
Sbjct: 1541 TLAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAPSPKELL 1600
Query: 506 LFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQL 565
+ PAV P PK AP P A PP P
Sbjct: 1601 I--------PPAVTSPSPK--------------EAPTPPAVTPPSP-------------- 1624
Query: 566 RAPPRPPRPHGRRTGGPQA-----TQPRPPARAQATQGGREGQARTLGPA--APT-VDSN 617
P P P G T P P PA G QA PA PT +
Sbjct: 1625 EKGPATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEV 1684
Query: 618 LSSEARPVTSFLSLSQVSGPQ 638
L + A T ++ GPQ
Sbjct: 1685 LVAPAPESTPIITAPTRKGPQ 1705
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 58.9 bits (141), Expect = 2e-08
Identities = 69/241 (28%), Positives = 85/241 (35%), Gaps = 45/241 (18%)
Query: 453 APPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFLGRAP 512
+PP P SP + P P AT PP+ P P A+ P +AP
Sbjct: 445 SPPVQAPFSPPASPPVSPSAT--PPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP 502
Query: 513 PPRPA----VEQPPPKVYVTRVRPGQRASPRAPAP---RAPWPPFPGVFLHPRPLPRVQ- 564
PP A + +PPP+ P +A P PA +AP+ P + + P P Q
Sbjct: 503 PPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLPMSPLATPPPQA 562
Query: 565 --------LRAPPRPPRPHGRRTGGPQATQP-RPPARAQATQGGREGQARTLGPAAPTVD 615
L+ PP PP P P RPP T L P P
Sbjct: 563 PPVLAAPLLQVPPSPP-------ASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPP 615
Query: 616 SNLSSEARPVTSFLSLSQVSGPQLPGEGE------EEEEGEDDGAPGDEAAS--EDSEEA 667
S S S +SGP L G EE G D G G AAS D+E A
Sbjct: 616 SRSPS-----------STLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELA 664
Query: 668 A 668
A
Sbjct: 665 A 665
Score = 48.5 bits (114), Expect = 3e-05
Identities = 59/207 (28%), Positives = 73/207 (35%), Gaps = 45/207 (21%)
Query: 444 LDSLEPTEAAPPRS------GPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWA 497
L +L P + PPR GP S +P A P A L PP P + S
Sbjct: 277 LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPPT-----LPATPHSSSLT 331
Query: 498 ARAARPLPLF--LGRAPPPRPAVEQPP-------------PKVYVTR-VRPGQRASPRA- 540
+ A PLPL APP + PP P + T P SP A
Sbjct: 332 CQLATPLPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLAT 391
Query: 541 PAPRAPWPPFPGVFLHPRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGR 600
P P+AP P + L P L+APP PP P + P +A
Sbjct: 392 PPPQAP----PALALPP-------LQAPPSPP------ASPPLSPLATPSPQAPNALAVH 434
Query: 601 EGQARTLGPAAPTVDSNLSSEARPVTS 627
QA P +P V + S A P S
Sbjct: 435 LLQAPFSPPPSPPVQAPFSPPASPPVS 461
Score = 42.0 bits (97), Expect = 0.003
Identities = 40/129 (31%), Positives = 50/129 (38%), Gaps = 9/129 (6%)
Query: 454 PPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRH--SRALSWAARA----ARPLPLF 507
PP GP+ +A +P RP GG + SR+LS +A AR P
Sbjct: 200 PPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPS- 258
Query: 508 LGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQLRA 567
R P PA P + +RP Q PR A A P P P +Q +A
Sbjct: 259 -ARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQA 317
Query: 568 PPR-PPRPH 575
PP P PH
Sbjct: 318 PPTLPATPH 326
Score = 41.2 bits (95), Expect = 0.005
Identities = 54/188 (28%), Positives = 67/188 (35%), Gaps = 20/188 (10%)
Query: 450 TEAAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGT---PRHSRALSWAARAARPLPL 506
+ +A P S P P+A P A A P+ P+P+ P+ + AA A PL
Sbjct: 243 SSSATPLSSPARSGPSARGTPRAP-AHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSS 301
Query: 507 FLGRAPPPRPAVE-QPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQL 565
P P A++ Q PP + T P P AP P L P P
Sbjct: 302 SPLATPSPSAALQSQAPPTLPATPHSSSLTCQLATPLPLAPPSPSAPPSLQTLPSP---- 357
Query: 566 RAPPRPPRPHGRRTGGP--QATQ---PRPPARAQATQGGREGQARTL----GPAAPTVDS 616
P PP G P QAT P PP AT + A L P +P
Sbjct: 358 --PATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASP 415
Query: 617 NLSSEARP 624
LS A P
Sbjct: 416 PLSPLATP 423
Score = 40.0 bits (92), Expect = 0.011
Identities = 53/194 (27%), Positives = 68/194 (35%), Gaps = 39/194 (20%)
Query: 455 PRSGP--------QSPAPAAPAQPGATLAPP---TPPRP-----RDGGTPRHSRALSWAA 498
PR+GP ++PA PA APP T P P R GT R
Sbjct: 75 PRAGPTRSAGTSSRNPASRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGL 134
Query: 499 RAARPLPLFLGRAP--PPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFP----- 551
R + + G+A P R A+ G R P P P P
Sbjct: 135 RISAEETVARGKATEAPKRSALSA------------GARRDTSGPTPGTPSPAMARRSRA 182
Query: 552 -GVFLH-PRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLGP 609
G + PRP P + R P PR T+P P AR + + GG G R
Sbjct: 183 AGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGG--GLQRPASR 240
Query: 610 AAPTVDSNLSSEAR 623
+ + + LSS AR
Sbjct: 241 SLSSSATPLSSPAR 254
Score = 39.7 bits (91), Expect = 0.015
Identities = 77/302 (25%), Positives = 98/302 (32%), Gaps = 81/302 (26%)
Query: 444 LDSLEPTEAAPPRSGPQSPAPAAPAQPGATLAPPTP-----PRPRDGGTPRHSRALSWAA 498
L +L A+ P P SP+ + P P AT P P P + +P S L
Sbjct: 528 LQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPR 587
Query: 499 RAARPLP--------LFLGRAPPPRPAVEQPPPKVYVTRVRPGQRAS------------- 537
R P P L L AP P P + P G +S
Sbjct: 588 RPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDS 647
Query: 538 -PRAPAPRAPWPPFPGVFLHPR-----PLPRVQLRAPPRPPRPHGRRTG----------- 580
P A +P P HP P P + R P P P TG
Sbjct: 648 GPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIY 707
Query: 581 ---GPQATQPRP----PARAQATQGGREG-------------QAR----TLGPAAPTVDS 616
GP++ P P P + T GG+ QAR LG +V
Sbjct: 708 ETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQ 767
Query: 617 NLSSEARPVTSFLSLSQ-VSGPQLPGEGEEEEEGEDDGAPGDEAASEDSEEAAGPALGRW 675
+L S T L+ ++ +G G G E G GA AA D+E LGRW
Sbjct: 768 HLLSR----TLLLAAAEGAAGGSGGGPGGAEGGGVTGGA---RAALSDAE------LGRW 814
Query: 676 RE 677
E
Sbjct: 815 AE 816
Score = 37.7 bits (86), Expect = 0.057
Identities = 60/234 (25%), Positives = 85/234 (36%), Gaps = 31/234 (13%)
Query: 456 RSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLF-----LGR 510
++G + PAA A T PP PRP TP R L AA A PL +G
Sbjct: 9 KAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLG-AAGAVGRKPLAERAGGIGG 67
Query: 511 APPPRPAVEQPPPKVYVTRVR-PGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQLRAPP 569
A P A P + T R P R RAP P P P+ +
Sbjct: 68 ATIPESAPRAGPTRSAGTSSRNPASRPPASGRGERAP----PAKNTSPGPVSSPGRASGT 123
Query: 570 RPPRPHGRRTGGPQATQPRPPARAQATQGGRE------GQARTLGPAAPTVDSNLSSEAR 623
P P G++ G + + AR +AT+ + + T GP T ++ +R
Sbjct: 124 TRPGPLGQK--GLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSR 181
Query: 624 PVTSFLSL---SQVSGPQLPGEGEEEEEGEDDGAPGDEAASEDSEEAAGPALGR 674
+ + L + + P+ P EG + +ASE S PA R
Sbjct: 182 AAGTEVGLPRPAPSARPRPPTEGPRKSV---------SSASEHSTTEPSPAARR 226
>gi|85815829 SH3-domain binding protein 1 [Homo sapiens]
Length = 701
Score = 58.9 bits (141), Expect = 2e-08
Identities = 58/192 (30%), Positives = 75/192 (39%), Gaps = 37/192 (19%)
Query: 435 LDDEDEGELLDSLEPTEAAPPRSGPQSPAPAAPAQPGATLA---------PPTPPRPRDG 485
L D L P+ A P + +PAPA P LA PPRP
Sbjct: 486 LQDTVSDRLASEELPSTAVPTPATTPAPAPAPAPAPAPALASAATKERTESEVPPRP--- 542
Query: 486 GTPRHSRALSWAARAARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRA 545
+P+ +R+ A + R P RP + PPP+V G R+SP AP
Sbjct: 543 ASPKVTRSPPETAAPVEDMARRTKRPAPARPTM--PPPQV------SGSRSSPPAP---- 590
Query: 546 PWPPFPGVFLHPRPLPR----VQLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGRE 601
P PP G P+ LPR LRAP PP P P PAR Q+ +
Sbjct: 591 PLPPGSGSPGTPQALPRRLVGSSLRAPTVPP---------PLPPTPPQPARRQSRRSPAS 641
Query: 602 GQARTLGPAAPT 613
+ GPA+P+
Sbjct: 642 PSPASPGPASPS 653
Score = 47.8 bits (112), Expect = 5e-05
Identities = 50/160 (31%), Positives = 62/160 (38%), Gaps = 23/160 (14%)
Query: 449 PTEAAPPRS---GPQSPAPAAPAQP-----GATLAPPTPPRPRDGGTPRHSRALSWAARA 500
P AAP + PAPA P P G+ +PP PP P G+P +AL
Sbjct: 552 PETAAPVEDMARRTKRPAPARPTMPPPQVSGSRSSPPAPPLPPGSGSPGTPQAL------ 605
Query: 501 ARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPL 560
R L RAP P + PP+ R R SP +P+P +P P P P
Sbjct: 606 PRRLVGSSLRAPTVPPPLPPTPPQ----PARRQSRRSPASPSPASPGPASPSPVSLSNP- 660
Query: 561 PRVQLRAPP----RPPRPHGRRTGGPQATQPRPPARAQAT 596
+V L A P G T QPRP + A T
Sbjct: 661 AQVDLGAATAEGGAPEAISGVPTPPAIPPQPRPRSLASET 700
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 58.5 bits (140), Expect = 3e-08
Identities = 71/230 (30%), Positives = 80/230 (34%), Gaps = 46/230 (20%)
Query: 449 PTEAAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFL 508
P+ AAPP P SP + P P AT P PP P + L A + P
Sbjct: 433 PSLAAPPLQVPPSPPASPPMSPSATPPPQAPP-------PLAAPPLQLAKPPPQAPPAL- 484
Query: 509 GRAPPPRPAVEQPPPKVYVTRVRPGQRA-SPRAPAPRAPWPPFPGVFLHPRPLPRVQLRA 567
A PP A+ PP PGQ SP A P +P P P L L+
Sbjct: 485 --ATPPLQALPSPPASF------PGQAPFSPSASLPMSPLATPPP--QAPPVLAAPLLQV 534
Query: 568 PPRPPRPHGRRTGGPQATQP-RPPARAQATQGGREGQARTLGPAAPTVDSNLSSEARPVT 626
PP PP P P RPP T L P P S S
Sbjct: 535 PPSPP-------ASPTLQAPRRPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPS------ 581
Query: 627 SFLSLSQVSGPQLPGEGE------EEEEGEDDGAPGDEAAS--EDSEEAA 668
S +SGP L G EE G D G G AAS D+E AA
Sbjct: 582 -----STLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAA 626
Score = 52.4 bits (124), Expect = 2e-06
Identities = 56/196 (28%), Positives = 73/196 (37%), Gaps = 20/196 (10%)
Query: 444 LDSLEPTEAAPPRS------GPQSPAPAAPAQPGATLAPPTPPR----PRDGGTPRHSRA 493
L +L P + PPR GP S +P A P A +P PP P TP
Sbjct: 268 LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQAT 327
Query: 494 LSWAARAARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPA--PRAPW-PPF 550
S + + FL PP + PPP+ P +A P PA P +P P
Sbjct: 328 TSLGSPTLQATHSFL--PSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPS 385
Query: 551 PGVFLHPRPLPRVQLRAP-PRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLG- 608
P P L L+AP PP P + P A+ P P+ +Q A L
Sbjct: 386 PQA---PNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQV 442
Query: 609 PAAPTVDSNLSSEARP 624
P +P +S A P
Sbjct: 443 PPSPPASPPMSPSATP 458
Score = 44.3 bits (103), Expect = 6e-04
Identities = 57/195 (29%), Positives = 75/195 (38%), Gaps = 21/195 (10%)
Query: 454 PPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRH--SRALSWAARA----ARPLPLF 507
PP GP+ +A +P RP GG + SR+LS +A AR P
Sbjct: 191 PPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPS- 249
Query: 508 LGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQLRA 567
R P PA P + +RP Q PR A A P L PL A
Sbjct: 250 -ARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGP------LSSSPLATPSPSA 302
Query: 568 PPRPPRPHGRRT-GGPQATQPRPPARAQATQGGREGQA-RTLGPAAPTVDSNLSSEARPV 625
PP P P +T P AT PP++A + G QA + P+ P S L++
Sbjct: 303 PPSPSAPPSLQTLPSPPAT---PPSQATTSLGSPTLQATHSFLPSPPL--SPLATPPPQA 357
Query: 626 TSFLSLSQVSGPQLP 640
L+L + P P
Sbjct: 358 PPALALPPLQAPPSP 372
Score = 39.7 bits (91), Expect = 0.015
Identities = 77/302 (25%), Positives = 98/302 (32%), Gaps = 81/302 (26%)
Query: 444 LDSLEPTEAAPPRSGPQSPAPAAPAQPGATLAPPTP-----PRPRDGGTPRHSRALSWAA 498
L +L A+ P P SP+ + P P AT P P P + +P S L
Sbjct: 489 LQALPSPPASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPR 548
Query: 499 RAARPLP--------LFLGRAPPPRPAVEQPPPKVYVTRVRPGQRAS------------- 537
R P P L L AP P P + P G +S
Sbjct: 549 RPPTPGPDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDS 608
Query: 538 -PRAPAPRAPWPPFPGVFLHPR-----PLPRVQLRAPPRPPRPHGRRTG----------- 580
P A +P P HP P P + R P P P TG
Sbjct: 609 GPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPPATGPGSADGLCTIY 668
Query: 581 ---GPQATQPRP----PARAQATQGGREG-------------QAR----TLGPAAPTVDS 616
GP++ P P P + T GG+ QAR LG +V
Sbjct: 669 ETEGPESATPAPGALDPGPSPGTSGGKAAAGAGAGASSRSPKQARLGELPLGALQASVVQ 728
Query: 617 NLSSEARPVTSFLSLSQ-VSGPQLPGEGEEEEEGEDDGAPGDEAASEDSEEAAGPALGRW 675
+L S T L+ ++ +G G G E G GA AA D+E LGRW
Sbjct: 729 HLLSR----TLLLAAAEGAAGGSGGGPGGAEGGGVTGGA---RAALSDAE------LGRW 775
Query: 676 RE 677
E
Sbjct: 776 AE 777
Score = 37.7 bits (86), Expect = 0.057
Identities = 49/191 (25%), Positives = 64/191 (33%), Gaps = 23/191 (12%)
Query: 451 EAAPPRSGPQSPAPAAPAQPGATLAPPTPPR-----PRDGGTPRHSRALSWAARAARPLP 505
E A G P A A P T PP R P +P + A+ RP P
Sbjct: 60 ERAGGIGGATIPESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGP 119
Query: 506 L------FLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFP------GV 553
L R + P + + + G R P P P P G
Sbjct: 120 LGQKGLRISAEETVARGKATEAPKR---SALSAGARRDTSGPTPGTPSPAMARRSRAAGT 176
Query: 554 FLH-PRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLGPAAP 612
+ PRP P + R P PR T+P P AR + + GG G R +
Sbjct: 177 EVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGG--GLQRPASRSLS 234
Query: 613 TVDSNLSSEAR 623
+ + LSS AR
Sbjct: 235 SSATPLSSPAR 245
Score = 37.0 bits (84), Expect = 0.097
Identities = 48/193 (24%), Positives = 63/193 (32%), Gaps = 19/193 (9%)
Query: 450 TEAAPPRSGPQSPAPAAPAQPGATLAPPTPP-------RPRDGGTPRHSRALSWAARAAR 502
+ +A P S P P+A P A P P RP PR A + ++
Sbjct: 234 SSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSS 293
Query: 503 PLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPR 562
PL APP A PP + P S + +P FL PL
Sbjct: 294 PLATPSPSAPPSPSA----PPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSP 349
Query: 563 VQLRAPPRPPR---PHGRRTGGPQATQPRPPARAQATQGGRE-----GQARTLGPAAPTV 614
+ P PP P + P A+ P P + Q QA P +P V
Sbjct: 350 LATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPV 409
Query: 615 DSNLSSEARPVTS 627
+ S A P S
Sbjct: 410 QAPFSPPASPPVS 422
Score = 36.2 bits (82), Expect = 0.17
Identities = 52/191 (27%), Positives = 63/191 (32%), Gaps = 39/191 (20%)
Query: 456 RSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAAR------------- 502
++G + PAA A T PP PRP TP R L A R
Sbjct: 9 KAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGA 68
Query: 503 PLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPR 562
+P RA P R +PP R P + SP + P P PL +
Sbjct: 69 TIPESAPRAGPTR--TSRPPASGRGERAPPAKNTSPGPVSS----PGRASGTTRPGPLGQ 122
Query: 563 VQLR--------------APPRPPRPHGRR--TGGPQATQPRPP----ARAQATQGGREG 602
LR AP R G R T GP P P +RA T+ G
Sbjct: 123 KGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPR 182
Query: 603 QARTLGPAAPT 613
A + P PT
Sbjct: 183 PAPSARPRPPT 193
>gi|23592228 extraembryonic, spermatogenesis, homeobox 1-like [Homo
sapiens]
Length = 406
Score = 58.5 bits (140), Expect = 3e-08
Identities = 50/137 (36%), Positives = 59/137 (43%), Gaps = 13/137 (9%)
Query: 449 PTEAAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRH---SRALSWAARAARPLP 505
P PPR P AP PG+ +AP PP PR P + W A P+P
Sbjct: 257 PMVPMPPRPPIAPMPPMAPVPPGSRMAP-VPPGPRMAPVPPWPPMAPVPPWPPMA--PVP 313
Query: 506 LFLGRAP-PPRPAVEQPPPKVYVTRVRPGQRASPRAPA-PRAPWPPFPGVFLHPRPLPRV 563
AP PP P + + PP + RV PG +P P P AP PP P + PLP
Sbjct: 314 TGPPMAPVPPGPPMARVPPGPPMARVPPGPPMAPLPPGPPMAPLPPGPPM----APLPPG 369
Query: 564 QLRAPPRPPRPHGRRTG 580
A P PPR H TG
Sbjct: 370 PPMA-PLPPRSHVPHTG 385
Score = 40.8 bits (94), Expect = 0.007
Identities = 45/151 (29%), Positives = 53/151 (35%), Gaps = 48/151 (31%)
Query: 498 ARAARPLPLFLGRA------------------------------PPPRPAVEQPP----- 522
A A PL +FLG A PP P V PP
Sbjct: 209 ADLAHPLDMFLGGAYYAAPALDPALCVHLVPQLPRPPVLPVPPMPPRPPMVPMPPRPPIA 268
Query: 523 PKVYVTRVRPGQRASPRAPAPR-APWPPFPGVFLHPRPLPRVQLRAPPRPPRPHGRRTGG 581
P + V PG R +P P PR AP PP+P + P+P PP P P TG
Sbjct: 269 PMPPMAPVPPGSRMAPVPPGPRMAPVPPWPPM----APVP----PWPPMAPVP----TGP 316
Query: 582 PQATQPRPPARAQATQGGREGQARTLGPAAP 612
P A P P A+ G + P AP
Sbjct: 317 PMAPVPPGPPMARVPPGPPMARVPPGPPMAP 347
>gi|21361376 splicing factor 3a, subunit 2 [Homo sapiens]
Length = 464
Score = 57.8 bits (138), Expect = 5e-08
Identities = 62/205 (30%), Positives = 71/205 (34%), Gaps = 21/205 (10%)
Query: 449 PTEAAPPRSGPQSPAPAAPAQPGATLAPPTP---PRPRDGGTPRHSRALSWAARAARPLP 505
P + P P P P G PP P P P GG P + A + P P
Sbjct: 218 PAPPSLPAGPPGVKRPPPPLMNGLPPRPPLPESLPPPPPGGLPLPPMPPTGPAPSGPPGP 277
Query: 506 LFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPA--PRAP--WPPFPGVF-----LH 556
+ PPP P V P P V+ P P AP P AP PP PGV +H
Sbjct: 278 ---PQLPPPAPGVHPPAPVVH----PPASGVHPPAPGVHPPAPGVHPPAPGVHPPTSGVH 330
Query: 557 PRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLGPAAPTVDS 616
P P P V AP P G P P P + G QA + PAAP V
Sbjct: 331 P-PAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPPS-AGVHPQAPGVHPAAPAVHP 388
Query: 617 NLSSEARPVTSFLSLSQVSGPQLPG 641
P + PQ PG
Sbjct: 389 QAPGVHPPAPGMHPQAPGVHPQPPG 413
Score = 52.4 bits (124), Expect = 2e-06
Identities = 61/186 (32%), Positives = 66/186 (35%), Gaps = 25/186 (13%)
Query: 443 LLDSLEPTEAAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAAR 502
L +SL P PP P P P P PP P P G P A+
Sbjct: 247 LPESLPPP---PPGGLPLPPMPPTGPAPSGPPGPPQLPPPAPGVHPPAPVVHPPASGVHP 303
Query: 503 PLPLFLGRAP---PPRPAVEQP-----PPKVYVTRVRPGQRASPRAPAPRAPW--PPFPG 552
P P AP PP P V P PP V PG P AP PP PG
Sbjct: 304 PAPGVHPPAPGVHPPAPGVHPPTSGVHPPAPGVHPPAPGVHPPAPGVHPPAPGVHPPAPG 363
Query: 553 VFLHPRPLPRVQLRAP---PRPPRPHGRRTGGPQATQPRPPARAQATQG-GREGQARTLG 608
V HP P V +AP P P H PQA PPA Q G Q +
Sbjct: 364 V--HPPPSAGVHPQAPGVHPAAPAVH------PQAPGVHPPAPGMHPQAPGVHPQPPGVH 415
Query: 609 PAAPTV 614
P+AP V
Sbjct: 416 PSAPGV 421
>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
Length = 1263
Score = 57.4 bits (137), Expect = 7e-08
Identities = 55/169 (32%), Positives = 57/169 (33%), Gaps = 40/169 (23%)
Query: 446 SLEPTEAAPPRSG------PQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAAR 499
S P APP G P PAP P PP PP P GG S
Sbjct: 569 SRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGT 628
Query: 500 AARPLPLFLGRA----PPPRP---------------AVEQPPPKVYVTRVRPGQRASPRA 540
A P P G A PPP P A+ PPP PG S R
Sbjct: 629 AISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPL-------PG---SARI 678
Query: 541 PAPRAPWPPFPGVFLHPRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRP 589
P P P P G+ P PLP PP PP P GGP P P
Sbjct: 679 PPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLP-----GGPGIPPPPP 722
Score = 46.2 bits (108), Expect = 2e-04
Identities = 41/119 (34%), Positives = 46/119 (38%), Gaps = 19/119 (15%)
Query: 454 PPRSGPQSPAPAAPAQPG-ATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFLGRA- 511
PP G P P PG A + PP PP P + G P L P P G
Sbjct: 670 PPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGI 729
Query: 512 PPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPL--PRVQLRAP 568
PPP P + PPP + V P AP PF L P+ L P VQLR P
Sbjct: 730 PPPPPGMGMPPPPPFGFGV------------PAAPVLPFG---LTPKKLYKPEVQLRRP 773
Score = 45.4 bits (106), Expect = 3e-04
Identities = 41/120 (34%), Positives = 47/120 (39%), Gaps = 21/120 (17%)
Query: 454 PPRSGPQSPAPAAPAQ-PGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFLGRAP 512
PP P+ +P+ PG T PP PP P P L +A P P G A
Sbjct: 644 PPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAG 703
Query: 513 PPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQLRAPPRPP 572
P P PPP PG P P P PPFPG P P P + + PP PP
Sbjct: 704 MPPP----PPP-------LPG---GPGIPPP----PPFPGGPGIPPPPPGMGM--PPPPP 743
Score = 40.8 bits (94), Expect = 0.007
Identities = 45/149 (30%), Positives = 51/149 (34%), Gaps = 31/149 (20%)
Query: 467 PAQPGATLAPPTPPRPRDGGT---PRHSRALSWAARAARPLPLFLGRAPPPRP---AVEQ 520
P+ P PP PP P D GT P + S P P PPP P +
Sbjct: 565 PSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPP----PPPPPLPGGVCISS 620
Query: 521 PPPKVYVTRVRPGQRASPRAPAPRAPWPPFP-GVFL-------------HPRPLPRVQLR 566
PP T + P S A P P PP P GV + P PLP
Sbjct: 621 PPSLPGGTAISPPPPLSGDATIP--PPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARI 678
Query: 567 APPRPPRPHGRRTGGPQATQPRPPARAQA 595
PP PP P G P PP +A
Sbjct: 679 PPPPPPLP-----GSAGIPPPPPPLPGEA 702
>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
Length = 1272
Score = 57.4 bits (137), Expect = 7e-08
Identities = 55/169 (32%), Positives = 57/169 (33%), Gaps = 40/169 (23%)
Query: 446 SLEPTEAAPPRSG------PQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAAR 499
S P APP G P PAP P PP PP P GG S
Sbjct: 578 SRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPPPPPPPLPGGVCISSPPSLPGGT 637
Query: 500 AARPLPLFLGRA----PPPRP---------------AVEQPPPKVYVTRVRPGQRASPRA 540
A P P G A PPP P A+ PPP PG S R
Sbjct: 638 AISPPPPLSGDATIPPPPPLPEGVGIPSPSSLPGGTAIPPPPPL-------PG---SARI 687
Query: 541 PAPRAPWPPFPGVFLHPRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRP 589
P P P P G+ P PLP PP PP P GGP P P
Sbjct: 688 PPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLP-----GGPGIPPPPP 731
Score = 46.2 bits (108), Expect = 2e-04
Identities = 41/119 (34%), Positives = 46/119 (38%), Gaps = 19/119 (15%)
Query: 454 PPRSGPQSPAPAAPAQPG-ATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFLGRA- 511
PP G P P PG A + PP PP P + G P L P P G
Sbjct: 679 PPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAGMPPPPPPLPGGPGIPPPPPFPGGPGI 738
Query: 512 PPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPL--PRVQLRAP 568
PPP P + PPP + V P AP PF L P+ L P VQLR P
Sbjct: 739 PPPPPGMGMPPPPPFGFGV------------PAAPVLPFG---LTPKKLYKPEVQLRRP 782
Score = 45.4 bits (106), Expect = 3e-04
Identities = 41/120 (34%), Positives = 47/120 (39%), Gaps = 21/120 (17%)
Query: 454 PPRSGPQSPAPAAPAQ-PGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFLGRAP 512
PP P+ +P+ PG T PP PP P P L +A P P G A
Sbjct: 653 PPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARIPPPPPPLPGSAGIPPPPPPLPGEAG 712
Query: 513 PPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQLRAPPRPP 572
P P PPP PG P P P PPFPG P P P + + PP PP
Sbjct: 713 MPPP----PPP-------LPG---GPGIPPP----PPFPGGPGIPPPPPGMGM--PPPPP 752
Score = 40.8 bits (94), Expect = 0.007
Identities = 45/149 (30%), Positives = 51/149 (34%), Gaps = 31/149 (20%)
Query: 467 PAQPGATLAPPTPPRPRDGGT---PRHSRALSWAARAARPLPLFLGRAPPPRP---AVEQ 520
P+ P PP PP P D GT P + S P P PPP P +
Sbjct: 574 PSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDSTTPPPPPPPP----PPPPPLPGGVCISS 629
Query: 521 PPPKVYVTRVRPGQRASPRAPAPRAPWPPFP-GVFL-------------HPRPLPRVQLR 566
PP T + P S A P P PP P GV + P PLP
Sbjct: 630 PPSLPGGTAISPPPPLSGDATIP--PPPPLPEGVGIPSPSSLPGGTAIPPPPPLPGSARI 687
Query: 567 APPRPPRPHGRRTGGPQATQPRPPARAQA 595
PP PP P G P PP +A
Sbjct: 688 PPPPPPLP-----GSAGIPPPPPPLPGEA 711
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 57.4 bits (137), Expect = 7e-08
Identities = 49/163 (30%), Positives = 60/163 (36%), Gaps = 19/163 (11%)
Query: 451 EAAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFLGR 510
E PP+ G QS P P +PG PP + G P H P +
Sbjct: 142 EGPPPQGGNQSQGP--PPRPGKPEGPPPQGGNQSQGPPPHPGK----PEGPPPQGGNQSQ 195
Query: 511 APPPRPAVEQPPPKVYVTRV-----RPGQRASPRAPAPRAPW--PPFPGVFLHPRPLPRV 563
PPPRP + PP + RPG+ P + P PP PG P P
Sbjct: 196 GPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGN 255
Query: 564 QLRAPPRPPRPHGRRTGGPQATQPRPPARAQ------ATQGGR 600
+ + PP P RP G G QP PP + QGGR
Sbjct: 256 KPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQGPPPPPQGGR 298
Score = 51.2 bits (121), Expect = 5e-06
Identities = 56/191 (29%), Positives = 75/191 (39%), Gaps = 31/191 (16%)
Query: 451 EAAPPRSGPQSPAPAAPAQPGATLAPPT---------PPRPR--DGGTPRH-SRALSWAA 498
E PP+ G QS P P +PG PP PPRP +G P+ +++
Sbjct: 58 EGRPPQGGNQSQGP--PPRPGKPEGPPPQGGNQSQGPPPRPGKPEGQPPQGGNQSQGPPP 115
Query: 499 RAARPL-PLFLG----RAPPPRPAVEQPPPKVYVTRVR--PGQRASPRAPAPRAPW---- 547
R +P P G + PPPRP + PP + + P + P P P+
Sbjct: 116 RPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQG 175
Query: 548 -PPFPGVFLHPRPLPRVQLRAPP-RPPRPHGRRTGGPQATQPRPP----ARAQATQGGRE 601
PP PG P P Q + PP RP +P G G +Q PP +QGG +
Sbjct: 176 PPPHPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNK 235
Query: 602 GQARTLGPAAP 612
Q P P
Sbjct: 236 PQGPPPHPGKP 246
Score = 46.2 bits (108), Expect = 2e-04
Identities = 43/138 (31%), Positives = 50/138 (36%), Gaps = 20/138 (14%)
Query: 451 EAAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFLGR 510
E PP+ G QS P P +PG PP + G P P +
Sbjct: 184 EGPPPQGGNQSQGP--PPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKP----Q 237
Query: 511 APPPRPAVEQPPPKVYVTRVRPGQRASP-RAPAPRAPW--PPFPGVFLHPRPLPRVQLRA 567
PPP P Q PP P + P R P P P PP G P P P + +
Sbjct: 238 GPPPHPGKPQGPP--------PQEGNKPQRPPPPGRPQGPPPPGGNPQQPLPPPAGKPQG 289
Query: 568 PPRPP---RPHGRRTGGP 582
PP PP RPH G P
Sbjct: 290 PPPPPQGGRPHRPPQGQP 307
Score = 43.9 bits (102), Expect = 8e-04
Identities = 49/170 (28%), Positives = 57/170 (33%), Gaps = 38/170 (22%)
Query: 459 PQSPAPAAPAQPGATLAPPTPP--RPRDGGTPRHSRALSWAARAARPLPLFLGRAPPPRP 516
P+ P QP T PP P RP GG + PPPRP
Sbjct: 36 PEGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQ--------------------SQGPPPRP 75
Query: 517 AV-EQPPPKVYVTRVRPGQRASPRAPAPRAPW--------PPFPGVFLHPRPLPRVQLRA 567
E PPP+ P R P P + P PP PG P P Q +
Sbjct: 76 GKPEGPPPQGGNQSQGPPPR--PGKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQG 133
Query: 568 PP-RPPRPHGRRTGGPQATQPRPP----ARAQATQGGREGQARTLGPAAP 612
PP RP +P G G +Q PP QGG + Q P P
Sbjct: 134 PPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKP 183
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 57.0 bits (136), Expect = 9e-08
Identities = 64/202 (31%), Positives = 70/202 (34%), Gaps = 54/202 (26%)
Query: 446 SLEPTEAAPPRSGPQSPAPAAPAQPG--ATLAPPTPPRPRDGGTP--------------- 488
S P AA + PAPA PA+P A LA P P G P
Sbjct: 136 SCAPVPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAA 195
Query: 489 ---RHSRALSWAARAARPLPLFLGRAPP-----PRPA----VEQPPPKVYVTRVRPGQRA 536
S AL + AA P + P P+PA V Q PP V
Sbjct: 196 QTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFV----------G 245
Query: 537 SPRAPAPRAPWPPFPGVFLHPRPLPRVQLRAPPRPP-------RPHGRRTGGPQATQPRP 589
+ PAP AP PP P P APP PP RP G G P A P
Sbjct: 246 AAAPPAPAAPSPP-------AAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAA-PAV 297
Query: 590 PARAQATQGGREGQARTLGPAA 611
P A A GG G A PAA
Sbjct: 298 PPPAAAQNGGSAGAAPAPAPAA 319
Score = 55.1 bits (131), Expect = 3e-07
Identities = 63/220 (28%), Positives = 76/220 (34%), Gaps = 34/220 (15%)
Query: 448 EPTEAAPPR-SGPQS------PAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARA 500
EP A P + +GP + P P PG P P P T S AL + A
Sbjct: 151 EPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHA 210
Query: 501 ARPLPLFLGRAPP-----PRPA-----VEQPPPKVYVTRVRPGQRASPRAPAPRAPW--- 547
A P + P P+PA ++ PP P + P APAP AP
Sbjct: 211 AAPAVSLVNNGPAALLPLPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAP 270
Query: 548 ---PPFPGVFLHPRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQA 604
PP P P P A P P P + GG P P A GG G +
Sbjct: 271 PPPPPAPATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAA----GGPAGVS 326
Query: 605 RTLGP----AAPTVDSNLSSEARPVTSFLSLSQ---VSGP 637
GP AAP S R V + +Q SGP
Sbjct: 327 GQPGPGAAAAAPAPGVKAESPKRVVQAAPPAAQTLAASGP 366
Score = 41.6 bits (96), Expect = 0.004
Identities = 47/160 (29%), Positives = 55/160 (34%), Gaps = 23/160 (14%)
Query: 452 AAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFLGRA 511
A PP + P P PAA G+ A P P P GG S A AA P P +A
Sbjct: 288 AGPPTAAPAVPPPAAAQNGGSAGAAPAPA-PAAGGPAGVSGQPGPGAAAAAPAPGV--KA 344
Query: 512 PPPRPAVEQPPPKVYVTRVR-PGQRASPRA---------PAPRAPWPPFPGVFLHPRPLP 561
P+ V+ PP P A+ P+P A PP PG P LP
Sbjct: 345 ESPKRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVPPPAPGT---PTGLP 401
Query: 562 R-------VQLRAPPRPPRPHGRRTGGPQATQPRPPARAQ 594
+ L P R T P PR P Q
Sbjct: 402 KGAAGAVTQSLSRTPTATTSGIRATLTPTVLAPRLPQPPQ 441
Score = 40.0 bits (92), Expect = 0.011
Identities = 55/193 (28%), Positives = 66/193 (34%), Gaps = 33/193 (17%)
Query: 457 SGPQSPAPAAPAQ--PGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFLGRAPPP 514
+G PAAPA+ PGA PP R R GG RP G P
Sbjct: 68 AGAAGAGPAAPAEGAPGAAPEPPPAGRARPGG-----------GGPQRP-----GPPSPR 111
Query: 515 RPAVEQ-PPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQLRAPPRPPR 573
RP V P P R P A AP P A V P P P A P P
Sbjct: 112 RPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAA-----AAVAAGPEPAPAGP--AKPAGPA 164
Query: 574 PHGRRTGGPQATQPRPPARAQATQGGREGQARTLGPAAPTVDSNLSSEARPVTSFL---- 629
R G P P + G A+TL +A ++S+ A P S +
Sbjct: 165 ALAARAGPGPGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSH--HAAAPAVSLVNNGP 222
Query: 630 -SLSQVSGPQLPG 641
+L + P PG
Sbjct: 223 AALLPLPKPAAPG 235
Score = 38.1 bits (87), Expect = 0.043
Identities = 44/176 (25%), Positives = 55/176 (31%), Gaps = 21/176 (11%)
Query: 513 PPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRV-------QL 565
P P V V G A P AP PG P P R Q
Sbjct: 45 PRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQR 104
Query: 566 RAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQARTLGPAAPTVDSNLSSEARPV 625
PP P RP P A + RPP A A + + + A P
Sbjct: 105 PGPPSPRRPLVPAGPAPPAAKLRPPPEGSAGSCAPVPAAAAVAAGPEPAPAGPAKPAGPA 164
Query: 626 TSFLSLSQVSGPQLPGEGEEEEEGEDDGAPGDEAASE---------DSEEAAGPAL 672
+L+ +GP PG G G G P A++ +S AA PA+
Sbjct: 165 ----ALAARAGPG-PGPGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAV 215
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 57.0 bits (136), Expect = 9e-08
Identities = 64/215 (29%), Positives = 83/215 (38%), Gaps = 41/215 (19%)
Query: 453 APPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARP--LPLFLGR 510
+PP GP + P APP PP P P A + +A +P PL L
Sbjct: 202 SPP--GPLTKGNLPVVAPPVPCAPPPPPPPPPPTPPPLPPASVLSDKAVKPQLAPLHLPP 259
Query: 511 APPPRPAVEQPPPKVYVTRVRPGQRASPRAPA-----PRAPWPPF-------PGVFLHPR 558
PPP P + PP Y PG +A P +PA P AP PP P L
Sbjct: 260 IPPPLPLL---PPCGY-----PGLKAEPASPAQDAQEPPAPPPPLPPYASCSPRASLPAP 311
Query: 559 PLPRVQLRA---PPRPPRPHG----RRTGGPQA--TQPRPPARAQATQGGREGQARTLG- 608
PLP V + PP PP+ + G QA P PP Q R G+ G
Sbjct: 312 PLPGVNSSSETPPPLPPKSPSFQAPPQKAGAQALPAPPAPPGSQPFLQKKRHGRPGAGGG 371
Query: 609 -------PAAPTVDSNLSSEARPVTSFLSLSQVSG 636
P A + + LSS+++ T++ Q G
Sbjct: 372 KLNPPPAPPARSPTTELSSKSQQATAWTPTQQPGG 406
Score = 44.3 bits (103), Expect = 6e-04
Identities = 44/164 (26%), Positives = 60/164 (36%), Gaps = 46/164 (28%)
Query: 447 LEPTEAAPPRSGPQSPAPAAPAQPGATLAP----PTPPRPRDGGTPRHSRALSWAARAAR 502
L+ A+P + + PAP P P A+ +P P PP P + +
Sbjct: 275 LKAEPASPAQDAQEPPAPPPPLPPYASCSPRASLPAPPLPGVNSS------------SET 322
Query: 503 PLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPR 562
P PL PP P+ + PP K G +A P PAP P P
Sbjct: 323 PPPL-----PPKSPSFQAPPQKA-------GAQALPAPPAP-------------PGSQPF 357
Query: 563 VQLRAPPRPPRPHGRRTGGPQATQPRPPARAQATQGGREGQART 606
+Q + RP GG P PPAR+ T+ + Q T
Sbjct: 358 LQKKRHGRP-----GAGGGKLNPPPAPPARSPTTELSSKSQQAT 396
Score = 41.6 bits (96), Expect = 0.004
Identities = 45/145 (31%), Positives = 51/145 (35%), Gaps = 40/145 (27%)
Query: 458 GPQSPAPAAPAQPGATLAPPT--PPRPRDGGTPRHSRALSWAARAARPLPLFLGRAPPPR 515
GP S AP+ P P T++ P P PR G T A R PPR
Sbjct: 125 GPGSRAPS-PRLPNKTISGPLIPPASPRLGNTSEAHGA---------------ARTAPPR 168
Query: 516 PAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPG-------VFLHPRPLPRVQLR-- 566
P V PPP +P P P P PP P + P PL + L
Sbjct: 169 PNVPAPPP------------PTPPPPPPPLP-PPLPSSSPIKTPLVSPPGPLTKGNLPVV 215
Query: 567 APPRPPRPHGRRTGGPQATQPRPPA 591
APP P P P P PPA
Sbjct: 216 APPVPCAPPPPPPPPPPTPPPLPPA 240
Score = 37.0 bits (84), Expect = 0.097
Identities = 41/152 (26%), Positives = 53/152 (34%), Gaps = 22/152 (14%)
Query: 483 RDGGTPRHSRALSWAARAARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPA 542
++GG ++R S LF G P RPA ++ V + GQ RAP+
Sbjct: 81 KEGGGSANTRGASTPPTLG---DLFAGGFPVLRPAGQRD-----VAGGKTGQGPGSRAPS 132
Query: 543 PRAPWPPFPGVFLHPRPLPRV---------QLRAPPRPPRPHGRRTGGPQATQPRPPARA 593
PR P G + P PR+ APPRP P P P PP
Sbjct: 133 PRLPNKTISGPLIPPAS-PRLGNTSEAHGAARTAPPRPNVP----APPPPTPPPPPPPLP 187
Query: 594 QATQGGREGQARTLGPAAPTVDSNLSSEARPV 625
+ + P P NL A PV
Sbjct: 188 PPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPV 219
Score = 32.3 bits (72), Expect = 2.4
Identities = 24/83 (28%), Positives = 30/83 (36%), Gaps = 16/83 (19%)
Query: 444 LDSLEPTEAAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTP-----RHSRALSWAA 498
L + + PP P+SP+ AP Q A P PP P G P RH R +
Sbjct: 313 LPGVNSSSETPPPLPPKSPSFQAPPQKAGAQALPAPPAP-PGSQPFLQKKRHGRPGAGGG 371
Query: 499 RAARPLPLFLGRAPPPRPAVEQP 521
+ PPP P P
Sbjct: 372 KL----------NPPPAPPARSP 384
>gi|210032580 SET domain containing 1B [Homo sapiens]
Length = 1923
Score = 57.0 bits (136), Expect = 9e-08
Identities = 70/249 (28%), Positives = 90/249 (36%), Gaps = 45/249 (18%)
Query: 410 KEEGDEDEEDEVQRRAFLFLNPDDFLDDEDEGEL------LDSLE-------PTEAAPPR 456
+EE +E+EE+ V + P+DF D +E L +DSL TEA P
Sbjct: 1142 EEEEEEEEEEMVAEESMASAGPEDFEQDGEEAALAPGAPAVDSLGMEEEVDIETEAVAPE 1201
Query: 457 SGP----QSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPLFLGRAP 512
P + P P +P + PP P G S ARP PL RAP
Sbjct: 1202 ERPSMLDEPPLPVGVEEPADSREPPEEPGLSQEGAMLLSPEPPAKEVEARP-PLSPERAP 1260
Query: 513 PPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQLRAPPRPP 572
VE PP + ++ P P PR P PP P P P PP
Sbjct: 1261 EHDLEVEPEPPMMLPLPLQ------PPLPPPRPPRPPSP-----PPEPETTDASHPSVPP 1309
Query: 573 RPHGRRTGGPQATQPRPPARAQATQGGREGQARTLGPAAPTVDSNLSSEARPVTSFLSLS 632
P + PP + Q+ PA P + LS +S LSL
Sbjct: 1310 EP---------LAEDHPPHTPGLCGSLAKSQSTETVPATPGGEPPLSGG----SSGLSL- 1355
Query: 633 QVSGPQLPG 641
S PQ+PG
Sbjct: 1356 --SSPQVPG 1362
Score = 42.0 bits (97), Expect = 0.003
Identities = 52/174 (29%), Positives = 59/174 (33%), Gaps = 33/174 (18%)
Query: 435 LDDEDEGELLDSLEPTEAAPPRSGPQSPAPAAPAQPGATL-----APPTPPRPRDG---- 485
L D DE E LD L PP GP PA L PT + +G
Sbjct: 577 LPDSDEDEELD-LGLGPRPPPEPGPPDPAGLLSQTAEVALDLVGDRTPTSEKMDEGQQSS 635
Query: 486 ------GTPRHSRALSWAARAARPLPLFLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPR 539
A +A +P+ + G A P+V P T P P
Sbjct: 636 GEDMEISDDEMPSAPITSADCPKPMVVTPGAAAVAAPSVLAP------TLPLPPPPGFPP 689
Query: 540 APAPRAPWPPFPGVFLHPRPLPRVQLRAPPRPPRPHGRRTGGPQATQPRPPARA 593
P P P PP PG F P PLP PP PP P P T P PP A
Sbjct: 690 LPPPPPPPPPQPG-FPMPPPLP-----PPPPPPPP-----AHPAVTVPPPPLPA 732
Score = 40.0 bits (92), Expect = 0.011
Identities = 36/109 (33%), Positives = 39/109 (35%), Gaps = 37/109 (33%)
Query: 447 LEPTEAAPPRSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHSRALSWAARAARPLPL 506
L P PP P P P QPG + PP PP P P P
Sbjct: 681 LPPPPGFPPLPPP---PPPPPPQPGFPMPPPLPPPP--------------------PPP- 716
Query: 507 FLGRAPPPRPAVEQPPPKVYVTRVRPGQRASPRAPAPRAPWPPF-PGVF 554
PP PAV PPP + PG P P P PPF PG+F
Sbjct: 717 -----PPAHPAVTVPPPPL---PAPPGVPPPPILP----PLPPFPPGLF 753
Score = 37.7 bits (86), Expect = 0.057
Identities = 50/169 (29%), Positives = 60/169 (35%), Gaps = 33/169 (19%)
Query: 456 RSGPQSPAPAAPAQPGATLAPPTPPRPRDGGTPRHS--RALSWAARAARP-LPLFLGRAP 512
R+ ++P P P P A LA PP R G PR S LS RP LGR
Sbjct: 1448 RAQARAPTPLPPLLP-APLASCPPPMKRKPGRPRRSPPSMLSLDGPLVRPPAGAALGREL 1506
Query: 513 PPRPAVEQPP--PKVYVTRVRPGQRASPRAPAPRAPWPPFPGVFLHPRPLPRVQLRAPPR 570
P Q P P + R + PAP P PP P PP
Sbjct: 1507 LLLPGQPQTPVFPSTHDPRTVTLDFRNAGIPAPPPPLPPQP----------------PPP 1550
Query: 571 PPRPHGRRTGGP----------QATQPRPPARAQATQGGREGQARTLGP 609
PP P T P +A P P R + T+ E A++ GP
Sbjct: 1551 PPPPPVEPTKLPFKELDNQWPSEAIPPGPRGRDEVTEEYME-LAKSRGP 1598
Score = 36.2 bits (82), Expect = 0.17
Identities = 63/244 (25%), Positives = 86/244 (35%), Gaps = 48/244 (19%)
Query: 431 PDDFLDDEDEGELLDSLEPTEAAPPRSGPQSPAPAAPAQPGATLA--PPTPPRPRDGGTP 488
P+ L+ E E ++ L PP P+ P+P P +P T A P PP P P
Sbjct: 1260 PEHDLEVEPEPPMMLPLPLQPPLPPPRPPRPPSP--PPEPETTDASHPSVPPEPLAEDHP 1317
Query: 489 RHSRALSWA---ARAARPLPLFLGRAPP---PRPAVEQPPPKVYVTRVRPGQRASPRAPA 542
H+ L + +++ +P G PP + P+V PG S AP+
Sbjct: 1318 PHTPGLCGSLAKSQSTETVPATPGGEPPLSGGSSGLSLSSPQV------PGSPFSYPAPS 1371
Query: 543 --------PRAPWPPFPGVFLHPRPLPRVQLRAPPRPPRPHGRR--TGGPQATQ------ 586
PR P F P + L P P P GRR GP A+
Sbjct: 1372 PSLSSGGLPRTPGRDFSFTPTFSEPSGPLLL---PVCPLPTGRRDERSGPLASPVLLETG 1428
Query: 587 -----PRPPARAQATQGGREGQARTLGPAAPTVDSNLSS--------EARPVTSFLSLSQ 633
P P A QAR P P + + L+S RP S S+
Sbjct: 1429 LPLPLPLPLPLPLALPAVLRAQARAPTPLPPLLPAPLASCPPPMKRKPGRPRRSPPSMLS 1488
Query: 634 VSGP 637
+ GP
Sbjct: 1489 LDGP 1492
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.137 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,068,891
Number of Sequences: 37866
Number of extensions: 3161006
Number of successful extensions: 34460
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 235
Number of HSP's successfully gapped in prelim test: 1689
Number of HSP's that attempted gapping in prelim test: 19899
Number of HSP's gapped (non-prelim): 10014
length of query: 1039
length of database: 18,247,518
effective HSP length: 112
effective length of query: 927
effective length of database: 14,006,526
effective search space: 12984049602
effective search space used: 12984049602
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.