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Search of human proteins with 40549422
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40549422 Theg homolog isoform 2 [Homo sapiens]
(355 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40549422 Theg homolog isoform 2 [Homo sapiens] 714 0.0
gi|7706121 Theg homolog isoform 1 [Homo sapiens] 701 0.0
gi|110349719 titin isoform N2-A [Homo sapiens] 50 4e-06
gi|116686120 periaxin isoform 2 [Homo sapiens] 41 0.002
gi|87298939 hypothetical protein LOC131831 [Homo sapiens] 40 0.004
gi|4503257 death-domain associated protein isoform a [Homo sapiens] 38 0.012
gi|215422388 death-domain associated protein isoform a [Homo sap... 38 0.012
gi|215422366 death-domain associated protein isoform b [Homo sap... 38 0.012
gi|7706113 protocadherin 12 precursor [Homo sapiens] 37 0.035
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 37 0.035
gi|167234419 thyroid hormone receptor associated protein 3 [Homo... 37 0.035
gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens] 35 0.078
gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens] 35 0.078
gi|118498356 kinectin 1 isoform a [Homo sapiens] 35 0.078
gi|33620775 kinectin 1 isoform a [Homo sapiens] 35 0.078
gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo sapiens] 35 0.078
gi|33356547 minichromosome maintenance complex component 2 [Homo... 35 0.10
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 35 0.10
gi|7661690 coiled-coil domain containing 9 [Homo sapiens] 35 0.10
gi|222537747 hypothetical protein LOC342979 [Homo sapiens] 35 0.13
gi|55741661 hypothetical protein LOC57653 [Homo sapiens] 35 0.13
gi|17975763 myelin transcription factor 1 [Homo sapiens] 35 0.13
gi|209862789 microtubule associated monoxygenase, calponin and L... 35 0.13
gi|115430231 REC8 homolog [Homo sapiens] 35 0.13
gi|115430229 REC8 homolog [Homo sapiens] 35 0.13
gi|187173290 troponin T1, skeletal, slow isoform b [Homo sapiens] 34 0.17
gi|187173288 troponin T1, skeletal, slow isoform a [Homo sapiens] 34 0.17
gi|95147555 microtubule-associated protein 1A [Homo sapiens] 34 0.17
gi|71061446 zinc finger protein, X-linked [Homo sapiens] 34 0.23
gi|17136078 VGF nerve growth factor inducible precursor [Homo sa... 34 0.23
>gi|40549422 Theg homolog isoform 2 [Homo sapiens]
Length = 355
Score = 714 bits (1843), Expect = 0.0
Identities = 355/355 (100%), Positives = 355/355 (100%)
Query: 1 MGDSRRRSLGNQPSSEAAGRSEREQDGDPRGLQSSVYESRRVTDPERQDLDNAELGPEDP 60
MGDSRRRSLGNQPSSEAAGRSEREQDGDPRGLQSSVYESRRVTDPERQDLDNAELGPEDP
Sbjct: 1 MGDSRRRSLGNQPSSEAAGRSEREQDGDPRGLQSSVYESRRVTDPERQDLDNAELGPEDP 60
Query: 61 EEELPPEEVAGEEFPETLDPKEALSELERVLDKDLEEDIPEISRLSISQKLPSTTMTKAR 120
EEELPPEEVAGEEFPETLDPKEALSELERVLDKDLEEDIPEISRLSISQKLPSTTMTKAR
Sbjct: 61 EEELPPEEVAGEEFPETLDPKEALSELERVLDKDLEEDIPEISRLSISQKLPSTTMTKAR 120
Query: 121 KRRRRRRLMELAEPKINWQVLKDRPSVYWTERFLEDTTLTITVPAVSRRVEELSRPKRFY 180
KRRRRRRLMELAEPKINWQVLKDRPSVYWTERFLEDTTLTITVPAVSRRVEELSRPKRFY
Sbjct: 121 KRRRRRRLMELAEPKINWQVLKDRPSVYWTERFLEDTTLTITVPAVSRRVEELSRPKRFY 180
Query: 181 LEYYNNNRTTPVWPIPRSSLEYRASSRLKELAAPKIRDNFWSMPMSEVSQVSRAAQMAVP 240
LEYYNNNRTTPVWPIPRSSLEYRASSRLKELAAPKIRDNFWSMPMSEVSQVSRAAQMAVP
Sbjct: 181 LEYYNNNRTTPVWPIPRSSLEYRASSRLKELAAPKIRDNFWSMPMSEVSQVSRAAQMAVP 240
Query: 241 SSRILQLSKPKAPATLLEEWDPVPKPKPHVSDHNRLLHLARPKAQSDKCVPDRDPRWEVL 300
SSRILQLSKPKAPATLLEEWDPVPKPKPHVSDHNRLLHLARPKAQSDKCVPDRDPRWEVL
Sbjct: 241 SSRILQLSKPKAPATLLEEWDPVPKPKPHVSDHNRLLHLARPKAQSDKCVPDRDPRWEVL 300
Query: 301 DVTKKVVASPRIISLAKPKVRKGLNEGYDRRPLASMSLPPPKASPEKCDQPRPGL 355
DVTKKVVASPRIISLAKPKVRKGLNEGYDRRPLASMSLPPPKASPEKCDQPRPGL
Sbjct: 301 DVTKKVVASPRIISLAKPKVRKGLNEGYDRRPLASMSLPPPKASPEKCDQPRPGL 355
>gi|7706121 Theg homolog isoform 1 [Homo sapiens]
Length = 379
Score = 701 bits (1808), Expect = 0.0
Identities = 355/379 (93%), Positives = 355/379 (93%), Gaps = 24/379 (6%)
Query: 1 MGDSRRRSLGNQPSSEAAGRSEREQDGDPRGLQSSVYESRRVTDPERQDLDNAELGPEDP 60
MGDSRRRSLGNQPSSEAAGRSEREQDGDPRGLQSSVYESRRVTDPERQDLDNAELGPEDP
Sbjct: 1 MGDSRRRSLGNQPSSEAAGRSEREQDGDPRGLQSSVYESRRVTDPERQDLDNAELGPEDP 60
Query: 61 EEELPPEEVAGEEFPETLDPKEALSELERVLDKDLEEDIPEISRLSISQKLPSTTMTKAR 120
EEELPPEEVAGEEFPETLDPKEALSELERVLDKDLEEDIPEISRLSISQKLPSTTMTKAR
Sbjct: 61 EEELPPEEVAGEEFPETLDPKEALSELERVLDKDLEEDIPEISRLSISQKLPSTTMTKAR 120
Query: 121 KRRRRRRLMELAEPKINWQVLKDR------------------------PSVYWTERFLED 156
KRRRRRRLMELAEPKINWQVLKDR PSVYWTERFLED
Sbjct: 121 KRRRRRRLMELAEPKINWQVLKDRKGRCGKGYAWISPCKMSLHFCLCWPSVYWTERFLED 180
Query: 157 TTLTITVPAVSRRVEELSRPKRFYLEYYNNNRTTPVWPIPRSSLEYRASSRLKELAAPKI 216
TTLTITVPAVSRRVEELSRPKRFYLEYYNNNRTTPVWPIPRSSLEYRASSRLKELAAPKI
Sbjct: 181 TTLTITVPAVSRRVEELSRPKRFYLEYYNNNRTTPVWPIPRSSLEYRASSRLKELAAPKI 240
Query: 217 RDNFWSMPMSEVSQVSRAAQMAVPSSRILQLSKPKAPATLLEEWDPVPKPKPHVSDHNRL 276
RDNFWSMPMSEVSQVSRAAQMAVPSSRILQLSKPKAPATLLEEWDPVPKPKPHVSDHNRL
Sbjct: 241 RDNFWSMPMSEVSQVSRAAQMAVPSSRILQLSKPKAPATLLEEWDPVPKPKPHVSDHNRL 300
Query: 277 LHLARPKAQSDKCVPDRDPRWEVLDVTKKVVASPRIISLAKPKVRKGLNEGYDRRPLASM 336
LHLARPKAQSDKCVPDRDPRWEVLDVTKKVVASPRIISLAKPKVRKGLNEGYDRRPLASM
Sbjct: 301 LHLARPKAQSDKCVPDRDPRWEVLDVTKKVVASPRIISLAKPKVRKGLNEGYDRRPLASM 360
Query: 337 SLPPPKASPEKCDQPRPGL 355
SLPPPKASPEKCDQPRPGL
Sbjct: 361 SLPPPKASPEKCDQPRPGL 379
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 49.7 bits (117), Expect = 4e-06
Identities = 71/320 (22%), Positives = 124/320 (38%), Gaps = 67/320 (20%)
Query: 44 DPERQDLDNAELGPEDPEEELPPEEVAGEEFPETLDPKEALSELERVLDKDLEEDIPEIS 103
+PE + + E+ PE+P EEVA PE + K+A+ E + K +E ++S
Sbjct: 10240 EPEEEPISEEEI-PEEPPSIEEVEEVAPPRVPEVI--KKAVPEAPTPVPKKVEAPPAKVS 10296
Query: 104 RLSISQKLPSTTMTKAR---------KRRRRRRLM----ELAEPKINWQVLKDRPSVYWT 150
+ +K+P K K+ ++++ E P VL+++ SV +
Sbjct: 10297 KKIPEEKVPVPVQKKEAPPAKVPEVPKKVPEKKVLVPKKEAVPPAKGRTVLEEKVSVAFR 10356
Query: 151 ERFLEDTTLTITVPAVSRRVEELSRPKRFYL--EYYNNNRTTPVWPIPRSSLEYRASSRL 208
+ + L + V V VEE+ + F+ EY+ E+
Sbjct: 10357 QEVVVKERLELEV--VEAEVEEIPEEEEFHEVEEYFEEG-------------EFHEVEEF 10401
Query: 209 KELAAPKIRDNFWSMPMSEVSQVSRAAQMAVPSSRILQLSKPKAPATLLEEWDPVPKPK- 267
+L ++ + + V +V A ++ V KPKAP PK
Sbjct: 10402 IKLEQHRVEEEHRVEKVHRVIEVFEAEEVEV-------FEKPKAP------------PKG 10442
Query: 268 PHVSDHNRLLHLARPKAQSDKCVPDRDPRWEVLDVTKKVVASPRIISLAKPKVRKGLNEG 327
P +S+ + PK K VP ++P +V +V KK+V ++ +P+V
Sbjct: 10443 PEISEK-----IIPPKKPPTKVVPRKEPPAKVPEVPKKIVVEEKVRVPEEPRVPP----- 10492
Query: 328 YDRRPLASMSLPPPKASPEK 347
LPP + PEK
Sbjct: 10493 ----TKVPEVLPPKEVVPEK 10508
Score = 30.8 bits (68), Expect = 1.9
Identities = 50/231 (21%), Positives = 98/231 (42%), Gaps = 32/231 (13%)
Query: 45 PERQDL--DNAELGPEDPEEELPPEEVAGEEFPETLDPKEALSELERVLDKDLEEDIPEI 102
PE +++ + E+ PE EEE+PPEE E E + +E L E++ + + +PEI
Sbjct: 10135 PEEEEVLPEEEEIPPE--EEEVPPEEEYVPEEEEFVPEEEVLPEVKPKV--PVPAPVPEI 10190
Query: 103 SRLSISQKL--------PSTTMTKARKRRRRRRLMELAEPKINWQVLKDRPSVYWTERFL 154
+ +K+ P + + K+ +R++ E ++ + + P E +
Sbjct: 10191 KKKVTEKKVVIPKKEEAPPAKVPEVPKKVEEKRIILPKEEEVLPVEVTEEPE----EEPI 10246
Query: 155 EDTTLTITVPAVSRRVEELSRPKRFYLEYYNNNRTTPVWPIPR--SSLEYRASSRLKELA 212
+ + P++ VEE++ P+ E P+P+ + + S ++ E
Sbjct: 10247 SEEEIPEEPPSI-EEVEEVAPPR--VPEVIKKAVPEAPTPVPKKVEAPPAKVSKKIPEEK 10303
Query: 213 APKIRDNFWSMPMSEVSQVSRAAQMAVPSSRILQLSKPKAP----ATLLEE 259
P + P ++V +V + VP ++L K P T+LEE
Sbjct: 10304 VP-VPVQKKEAPPAKVPEVPK----KVPEKKVLVPKKEAVPPAKGRTVLEE 10349
Score = 30.0 bits (66), Expect = 3.3
Identities = 58/281 (20%), Positives = 109/281 (38%), Gaps = 57/281 (20%)
Query: 57 PEDPEEELPPEEVAGEEFPETLDPKEALSELERVLDK-----------------DLEEDI 99
PE+P++ +P ++V + PE PKE E E+V++K D++E I
Sbjct: 10840 PEEPKKIIPEKKVPVIKKPEAPPPKE--PEPEKVIEKPKLKPRPPPPPPAPPKEDVKEKI 10897
Query: 100 PEISRL---------SISQKLPSTTMTKARKRRRRRRLMELAEPK-----INWQVLKDRP 145
++ + + +K+ T + ++ R+L+ +P+ + VL+ RP
Sbjct: 10898 FQLKAIPKKKVPEKPQVPEKVELTPLKVPGGEKKVRKLLPERKPEPKEEVVLKSVLRKRP 10957
Query: 146 SVYWTERFLEDTTL------TITVPAVSRRVEELSRP-----KRFYLEYYNNNRTTPVWP 194
E +E L + P + VEE+ P +R E P P
Sbjct: 10958 EE--EEPKVEPKKLEKVKKPAVPEPPPPKPVEEVEVPTVTKRERKIPEPTKVPEIKPAIP 11015
Query: 195 IPRSSLEYRASSRLKELAAPKIRDNFWSMPMSEVSQVSRAAQMAVPSSRILQLSKPKAPA 254
+P + + + +K + P + P++ V + A + + +KPK P
Sbjct: 11016 LPAPEPKPKPEAEVKTIKPPPVEPE--PTPIAAPVTVPVVGKKAEAKAPKEEAAKPKGPI 11073
Query: 255 TLLEEWDPVPKPKPHVSDHNRLLHLARPKAQSDKCVPDRDP 295
+ P P P ++ +L RP + +K PD P
Sbjct: 11074 ----KGVPKKTPSPIEAERRKL----RPGSGGEK-PPDEAP 11105
>gi|116686120 periaxin isoform 2 [Homo sapiens]
Length = 1461
Score = 40.8 bits (94), Expect = 0.002
Identities = 57/275 (20%), Positives = 109/275 (39%), Gaps = 41/275 (14%)
Query: 60 PEEELPP------EEVAGEEFPETLDPKEALSELERVLDKDLEEDIPEISRLSISQ-KLP 112
PE LP E+ + PE P+ L E++ L K E +PE+S +++ + +LP
Sbjct: 513 PEVRLPEVQLLKVSEMKLPKVPEMAVPEVRLPEVQ--LPKVSEMKLPEVSEVAVPEVRLP 570
Query: 113 STTMTKARKRRRRRRLMELAEPKINWQVLKDRPSVYWTERFLEDTTLT----ITVPAVSR 168
+ K + + + E+ PK+ P + E L + L + VP V
Sbjct: 571 EVQLPKVPEMK----VPEMKLPKV--------PEMKLPEMKLPEVQLPKVPEMAVPDV-- 616
Query: 169 RVEELSRPKRFYLEYYNNNRTTPVWPIPRSSLEYRASSRLKELAAPKIRDNFWSMPMSEV 228
+ E+ PK P +P L ++ E+A P + +P
Sbjct: 617 HLPEVQLPK------------VPEMKLPEMKLPEVKLPKVPEMAVPDVHLPEVQLPKVPE 664
Query: 229 SQVSRAAQMAVPSSRILQLSKPKAPATLLEEWDPVPKPKPHVSDHN--RLLHLARPKAQS 286
++ + +MAVP R+ ++ PK L + + P H+ + ++ + P +
Sbjct: 665 MKLPKMPEMAVPEVRLPEVQLPKVSEMKLPKVPEMAVPDVHLPEVQLPKVCEMKVPDMKL 724
Query: 287 DKCVPDRDPRWEVLDVTKKVVASPRIISLAKPKVR 321
+ + P V DV V P++ + P+++
Sbjct: 725 PEIKLPKVPEMAVPDVHLPEVQLPKVSEIRLPEMQ 759
Score = 28.9 bits (63), Expect = 7.3
Identities = 26/118 (22%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 207 RLKELAAPKIRDNFWSMPMSEVSQVSRAAQMAVPSSRILQLSKPKAPATLLEEWDPVPKP 266
++ E A P++R +P ++ + +MAVP R+ ++ PK L + + P
Sbjct: 454 KVPEAALPEVRLPEVELPKVSEMKLPKVPEMAVPEVRLPEVELPKVSEMKLPKVPEMAVP 513
Query: 267 KPHVSDHN--RLLHLARPKAQSDKCVPD-RDPRWEVLDVTKKVVASPRIISLAKPKVR 321
+ + + ++ + PK + VP+ R P ++ V++ + P + +A P+VR
Sbjct: 514 EVRLPEVQLLKVSEMKLPKV-PEMAVPEVRLPEVQLPKVSE--MKLPEVSEVAVPEVR 568
Score = 28.9 bits (63), Expect = 7.3
Identities = 51/218 (23%), Positives = 80/218 (36%), Gaps = 41/218 (18%)
Query: 57 PEDPEEELPP---EEVAGEEFPETLDPKEALSELERVLDKDLEEDIPEISRLSISQKLPS 113
P+ PE +LP EV + PE P L E++ L K E +PE+ KLP
Sbjct: 588 PKVPEMKLPEMKLPEVQLPKVPEMAVPDVHLPEVQ--LPKVPEMKLPEM-------KLPE 638
Query: 114 TTMTKARKRRRRR-RLMELAEPKINWQVLKDRPSVYWTERFLEDTTLTITVPAVSRRVEE 172
+ K + L E+ PK+ L P + E L + L +V E
Sbjct: 639 VKLPKVPEMAVPDVHLPEVQLPKVPEMKLPKMPEMAVPEVRLPEVQLP--------KVSE 690
Query: 173 LSRPKRFYLEYYNNNRTTPVWPIPRSSLEYRASSRLKELAAPKIRDNFWSMPMSEVSQVS 232
+ PK P +P L ++ E+ P M + E+ ++
Sbjct: 691 MKLPK------------VPEMAVPDVHLPEVQLPKVCEMKVP-------DMKLPEI-KLP 730
Query: 233 RAAQMAVPSSRILQLSKPKAPATLLEEWDPVPKPKPHV 270
+ +MAVP + ++ PK L E P H+
Sbjct: 731 KVPEMAVPDVHLPEVQLPKVSEIRLPEMQVPKVPDVHL 768
>gi|87298939 hypothetical protein LOC131831 [Homo sapiens]
Length = 663
Score = 39.7 bits (91), Expect = 0.004
Identities = 33/118 (27%), Positives = 52/118 (44%), Gaps = 5/118 (4%)
Query: 38 ESRRVTDPERQDLDNAELGPEDPEEELPPEEVAGEEFPETLDPKEALSE--LERVLD-KD 94
E + E ++++ E E+ EEE+ EE+ GEE + L+ E SE L +V D D
Sbjct: 29 EEEEEVEEEEEEVEEEEEEVEEEEEEVVEEELVGEE--QELEAPETFSEEYLWKVTDIGD 86
Query: 95 LEEDIPEISRLSISQKLPSTTMTKARKRRRRRRLMELAEPKINWQVLKDRPSVYWTER 152
++D P++ S PS T T + A P + K P ++ T R
Sbjct: 87 YDDDFPDVRPRLASIVSPSLTSTFVPSQSATSTETPSASPPSSTSSHKSFPKIFQTFR 144
Score = 29.3 bits (64), Expect = 5.6
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 2/60 (3%)
Query: 44 DPERQDLDNAE--LGPEDPEEELPPEEVAGEEFPETLDPKEALSELERVLDKDLEEDIPE 101
DP ++D +E L E+ EEE+ EE EE E ++ +E E ++ ++ E + PE
Sbjct: 12 DPGKKDQKESEEELEEEEEEEEVEEEEEEVEEEEEEVEEEEEEVVEEELVGEEQELEAPE 71
>gi|4503257 death-domain associated protein isoform a [Homo sapiens]
Length = 740
Score = 38.1 bits (87), Expect = 0.012
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 2 GDSRRRSLGNQPSSEAAGRSEREQDGDPRGLQSSVYESRRVTDPERQ-DLDNAELGPEDP 60
G S S G +S A E +++ D + E TD E + DL+ + G ED
Sbjct: 418 GPSGMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDD 477
Query: 61 EEELPPEEVAGEEFPETLDPKEALSELERVLDKDLEEDIPEISRLSISQK 110
EEE EE A + + K +S L+ +K+LE +ISR S Q+
Sbjct: 478 EEEDEEEEAAAGKDGD----KSPMSSLQISNEKNLEPG-KQISRSSGEQQ 522
Score = 28.5 bits (62), Expect = 9.6
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 5 RRRSLGNQPSSEAAGRSEREQDGD--PRGLQSSVYESRRVTDPERQDLDNAELGPEDPEE 62
+RR+ SS +A E D P G+ S S + + +D + ++ E+ EE
Sbjct: 393 KRRARLQGTSSHSADTPEASLDSGEGPSGMASQGCPSASRAETDDEDDEESDEEEEEEEE 452
Query: 63 ELPPEEVAGEEFPETLDPKEALSELERVLDKDLEEDIPE 101
E E EE +E L +++ + D EED E
Sbjct: 453 EEEEEATDSEE-------EEDLEQMQEGQEDDEEEDEEE 484
>gi|215422388 death-domain associated protein isoform a [Homo
sapiens]
Length = 740
Score = 38.1 bits (87), Expect = 0.012
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 2 GDSRRRSLGNQPSSEAAGRSEREQDGDPRGLQSSVYESRRVTDPERQ-DLDNAELGPEDP 60
G S S G +S A E +++ D + E TD E + DL+ + G ED
Sbjct: 418 GPSGMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDD 477
Query: 61 EEELPPEEVAGEEFPETLDPKEALSELERVLDKDLEEDIPEISRLSISQK 110
EEE EE A + + K +S L+ +K+LE +ISR S Q+
Sbjct: 478 EEEDEEEEAAAGKDGD----KSPMSSLQISNEKNLEPG-KQISRSSGEQQ 522
Score = 28.5 bits (62), Expect = 9.6
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 5 RRRSLGNQPSSEAAGRSEREQDGD--PRGLQSSVYESRRVTDPERQDLDNAELGPEDPEE 62
+RR+ SS +A E D P G+ S S + + +D + ++ E+ EE
Sbjct: 393 KRRARLQGTSSHSADTPEASLDSGEGPSGMASQGCPSASRAETDDEDDEESDEEEEEEEE 452
Query: 63 ELPPEEVAGEEFPETLDPKEALSELERVLDKDLEEDIPE 101
E E EE +E L +++ + D EED E
Sbjct: 453 EEEEEATDSEE-------EEDLEQMQEGQEDDEEEDEEE 484
>gi|215422366 death-domain associated protein isoform b [Homo
sapiens]
Length = 752
Score = 38.1 bits (87), Expect = 0.012
Identities = 34/110 (30%), Positives = 50/110 (45%), Gaps = 6/110 (5%)
Query: 2 GDSRRRSLGNQPSSEAAGRSEREQDGDPRGLQSSVYESRRVTDPERQ-DLDNAELGPEDP 60
G S S G +S A E +++ D + E TD E + DL+ + G ED
Sbjct: 430 GPSGMASQGCPSASRAETDDEDDEESDEEEEEEEEEEEEEATDSEEEEDLEQMQEGQEDD 489
Query: 61 EEELPPEEVAGEEFPETLDPKEALSELERVLDKDLEEDIPEISRLSISQK 110
EEE EE A + + K +S L+ +K+LE +ISR S Q+
Sbjct: 490 EEEDEEEEAAAGKDGD----KSPMSSLQISNEKNLEPG-KQISRSSGEQQ 534
Score = 28.5 bits (62), Expect = 9.6
Identities = 26/99 (26%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 5 RRRSLGNQPSSEAAGRSEREQDGD--PRGLQSSVYESRRVTDPERQDLDNAELGPEDPEE 62
+RR+ SS +A E D P G+ S S + + +D + ++ E+ EE
Sbjct: 405 KRRARLQGTSSHSADTPEASLDSGEGPSGMASQGCPSASRAETDDEDDEESDEEEEEEEE 464
Query: 63 ELPPEEVAGEEFPETLDPKEALSELERVLDKDLEEDIPE 101
E E EE +E L +++ + D EED E
Sbjct: 465 EEEEEATDSEE-------EEDLEQMQEGQEDDEEEDEEE 496
>gi|7706113 protocadherin 12 precursor [Homo sapiens]
Length = 1184
Score = 36.6 bits (83), Expect = 0.035
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 15/73 (20%)
Query: 43 TDPERQDLDNAELGPEDPEEELPPEEVAGEEFPETLDPKEALSELERVLDKDLEEDIPEI 102
TDPE+++ GP DPEE+L +++ EE LDP L+ LD+ D +
Sbjct: 1010 TDPEQEE------GPLDPEEDLSVKQLLEEELSSLLDPSTGLA-----LDRLSAPDPAWM 1058
Query: 103 SRLSISQKLPSTT 115
+RLS LP TT
Sbjct: 1059 ARLS----LPLTT 1067
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 36.6 bits (83), Expect = 0.035
Identities = 28/91 (30%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 38 ESRRVTDPERQDLDNAELGPEDPEEELPPEEVAGEEFPETLDPKEALSELERVLDKDLEE 97
ESR VT Q L+ ++ E+ EEE EE EE E D +E E E +++++
Sbjct: 1050 ESRPVTGERGQLLELSKESSEEEEEE-EDEEEEEEEEEEEEDEEEEEEEEEEEEEENIQS 1108
Query: 98 DIPEISR---LSISQKLPSTTMTKARKRRRR 125
P +++ ++I +K P K ++RRR
Sbjct: 1109 SPPRLTKPQSVAIKRKRPFVLKKKRGRKRRR 1139
>gi|167234419 thyroid hormone receptor associated protein 3 [Homo
sapiens]
Length = 955
Score = 36.6 bits (83), Expect = 0.035
Identities = 18/76 (23%), Positives = 34/76 (44%)
Query: 1 MGDSRRRSLGNQPSSEAAGRSEREQDGDPRGLQSSVYESRRVTDPERQDLDNAELGPEDP 60
M D + + +Q +A GR E E D +P+ + + ++ + + + P
Sbjct: 422 MADFHKEEMDDQDKDKAKGRKESEFDDEPKFMSKVIGANKNQEEEKSGKWEGLVYAPPGK 481
Query: 61 EEELPPEEVAGEEFPE 76
E++ EE+ E FPE
Sbjct: 482 EKQRKTEELEEESFPE 497
>gi|253970456 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 35.4 bits (80), Expect = 0.078
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 3 DSRRRSLGNQPSSEAAGRSERE-------QDGDPRGLQSSVYESRRVTDPERQDLDNAEL 55
DS + S + ++ SERE +D D G + ++E+ + E D +N+E
Sbjct: 543 DSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENVLDKELEENDSENSEF 602
Query: 56 GPEDPEEELPPEEVAGEEFPETLDPKEALSE-LERVLDKDLEE 97
+D E++ EE + EF E D KE + E+V D + +E
Sbjct: 603 -EDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDE 644
>gi|21361437 HIV-1 Tat specific factor 1 [Homo sapiens]
Length = 755
Score = 35.4 bits (80), Expect = 0.078
Identities = 29/103 (28%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 3 DSRRRSLGNQPSSEAAGRSERE-------QDGDPRGLQSSVYESRRVTDPERQDLDNAEL 55
DS + S + ++ SERE +D D G + ++E+ + E D +N+E
Sbjct: 543 DSEKESDEDCSEKQSEDGSEREFEENGLEKDLDEEGSEKELHENVLDKELEENDSENSEF 602
Query: 56 GPEDPEEELPPEEVAGEEFPETLDPKEALSE-LERVLDKDLEE 97
+D E++ EE + EF E D KE + E+V D + +E
Sbjct: 603 -EDDGSEKVLDEEGSEREFDEDSDEKEEEEDTYEKVFDDESDE 644
>gi|118498356 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 35.4 bits (80), Expect = 0.078
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 34 SSVYESRRVTDPERQDLDNAELGPEDPEEELPPEEVAGEEF-PETLDPKEALSELERVLD 92
SS E R+ E +D++N E E EL E+ + E + K+ L+EL++ LD
Sbjct: 1184 SSEQELERLRS-ENKDIENLRREREHLEMELEKAEMERSTYVTEVRELKDLLTELQKKLD 1242
Query: 93 KDLEEDIPEISRLSISQKLPSTTMTKARKRRRRRR 127
E + + L++ + + T+TK R + R+
Sbjct: 1243 DSYSEAVRQNEELNLLKAQLNETLTKLRTEQNERQ 1277
>gi|33620775 kinectin 1 isoform a [Homo sapiens]
Length = 1357
Score = 35.4 bits (80), Expect = 0.078
Identities = 26/95 (27%), Positives = 46/95 (48%), Gaps = 2/95 (2%)
Query: 34 SSVYESRRVTDPERQDLDNAELGPEDPEEELPPEEVAGEEF-PETLDPKEALSELERVLD 92
SS E R+ E +D++N E E EL E+ + E + K+ L+EL++ LD
Sbjct: 1184 SSEQELERLRS-ENKDIENLRREREHLEMELEKAEMERSTYVTEVRELKDLLTELQKKLD 1242
Query: 93 KDLEEDIPEISRLSISQKLPSTTMTKARKRRRRRR 127
E + + L++ + + T+TK R + R+
Sbjct: 1243 DSYSEAVRQNEELNLLKAQLNETLTKLRTEQNERQ 1277
>gi|56549131 transmembrane anchor protein 1 isoform 1 [Homo sapiens]
Length = 204
Score = 35.4 bits (80), Expect = 0.078
Identities = 37/117 (31%), Positives = 50/117 (42%), Gaps = 23/117 (19%)
Query: 16 EAAGRSEREQDGDPRGLQSSVYESR-RVTDPERQDLDNAELGP--EDPEEE--------L 64
E AG E E GDP + E E QDLD E GP E PEEE
Sbjct: 85 EPAGPGEPEGPGDPAAAPAEAEEQAVEARQEEEQDLD-GEKGPSSEGPEEEDGEGFSFKY 143
Query: 65 PPEEVAGEEFPETLDPKEALSELERV----------LDKDLEEDIPEISRLSISQKL 111
P ++ G ++ + + KE L E +RV L KD +E E+S + ++L
Sbjct: 144 SPGKLRGNQYKKMM-TKEELEEEQRVQKEQLAAIFKLMKDNKETFGEMSDGDVQEQL 199
>gi|33356547 minichromosome maintenance complex component 2 [Homo
sapiens]
Length = 904
Score = 35.0 bits (79), Expect = 0.10
Identities = 36/124 (29%), Positives = 51/124 (41%), Gaps = 12/124 (9%)
Query: 6 RRSLGNQPSSEAAGRSEREQDGDPRGLQSSVYESRRVTDPERQDLDNAELGPEDP-EEEL 64
+R GN P + + GRS R D L SS P +D LG E P EEE
Sbjct: 16 QRRRGNDPLTSSPGRSSRRTD----ALTSSPGRDL----PPFEDESEGLLGTEGPLEEEE 67
Query: 65 PPEEVAGEEFPETLDPKEALSELERVLDKDLEEDIPEISRLSISQKLPSTTMTKARKRRR 124
EE+ G+ A+ EL+ + L D ++ L+ SQ+ + + R R
Sbjct: 68 DGEELIGDGMERDY---RAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQRDREA 124
Query: 125 RRRL 128
R L
Sbjct: 125 GRGL 128
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 35.0 bits (79), Expect = 0.10
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 1/69 (1%)
Query: 38 ESRRVTDPERQDLDNAELGPEDPEEELPPEEVAGEEFPETLDPKEA-LSELERVLDKDLE 96
E + E ++ ++ E ED EE EE EEF E + +E L E E D++ E
Sbjct: 895 EEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEEEEDEEEE 954
Query: 97 EDIPEISRL 105
E++ E+ L
Sbjct: 955 EELEEVEDL 963
Score = 29.3 bits (64), Expect = 5.6
Identities = 17/51 (33%), Positives = 25/51 (49%)
Query: 51 DNAELGPEDPEEELPPEEVAGEEFPETLDPKEALSELERVLDKDLEEDIPE 101
D E E+ EEE EE E+F E + +E E E +++ EE+ E
Sbjct: 887 DEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEEFEE 937
Score = 28.5 bits (62), Expect = 9.6
Identities = 22/78 (28%), Positives = 35/78 (44%)
Query: 24 EQDGDPRGLQSSVYESRRVTDPERQDLDNAELGPEDPEEELPPEEVAGEEFPETLDPKEA 83
E+D + SS E + E ++ + E + EEE EE EE E + +E
Sbjct: 875 EEDLTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEFEEE 934
Query: 84 LSELERVLDKDLEEDIPE 101
E E L+++ EE+ E
Sbjct: 935 FEEEEGELEEEEEEEDEE 952
>gi|7661690 coiled-coil domain containing 9 [Homo sapiens]
Length = 531
Score = 35.0 bits (79), Expect = 0.10
Identities = 29/98 (29%), Positives = 44/98 (44%), Gaps = 4/98 (4%)
Query: 4 SRRRSLGNQPSSEAAGRSEREQDG---DPRGLQSSVYESRRVTDPERQDLDNAELGPEDP 60
SRRR ++P ++AA R+ + D G S E+ + T PE + PE P
Sbjct: 343 SRRRRKSSRPQAKAAPRAYSDHDDRWETKEGAASPAPETPQPTSPETSPKETPMQPPEIP 402
Query: 61 -EEELPPEEVAGEEFPETLDPKEALSELERVLDKDLEE 97
PPE+ E E + E +SE E + ++EE
Sbjct: 403 APAHRPPEDEGEENEGEEDEEWEDISEDEEEEEIEVEE 440
>gi|222537747 hypothetical protein LOC342979 [Homo sapiens]
Length = 673
Score = 34.7 bits (78), Expect = 0.13
Identities = 28/83 (33%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 2 GDSRRRSLGNQPSSEAAGRSEREQDGDPRGLQSSVYESRRVTDPERQDLDNAELGPEDPE 61
G ++ L ++ S+E G +ERE +P G++ V R ++ AE E+ E
Sbjct: 427 GGEKKLELESRGSAEKLG-TEREGGEEPLGIERKVEGHLRAEKEGDEEKRGAE--EEEVE 483
Query: 62 EELPPEEVAGEEFPE-TLDPKEA 83
E L E+ GEE PE T +P EA
Sbjct: 484 EPLGVEKKGGEEEPEATKEPLEA 506
>gi|55741661 hypothetical protein LOC57653 [Homo sapiens]
Length = 1646
Score = 34.7 bits (78), Expect = 0.13
Identities = 28/100 (28%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Query: 9 LGNQPSSEAAGRSEREQDGDPRGLQSSVYESRRVTDP---ERQDLDNAELGPEDPEEELP 65
LG Q S + + ++G +GL+ E +P E E E EE+
Sbjct: 853 LGQQKKSPLHAKMDESKEGSIQGLEEMQVEREGSLNPSLNEENVKGQGEKKEESEEEDEK 912
Query: 66 PEEVAGEEFPETLDPKEALSELERVL---DKDLEEDIPEI 102
EE E+ E + KEA E E + ++D EE + EI
Sbjct: 913 EEEEEEEKLEEEKEEKEAQEEQESLSVGEEEDKEEGLEEI 952
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 34.7 bits (78), Expect = 0.13
Identities = 35/121 (28%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 21 SEREQDGDPRGLQSSVYESRRVTDPERQDLDNAELGPEDPEEELPPEEVAGEEFPETLDP 80
+ER QD P+ L+ + E + ++ L + E E+ EEE EE EE E +
Sbjct: 229 TERSQDLCPQSLEDAASEE---SSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEE 285
Query: 81 KEALSELERVLDKDLEEDIPEISRLSISQKLPSTTMTKARKRRRRRRLMELAEPKINWQV 140
+E E E +++ EE+ E + I Q+ T+ T A+K R E PK + V
Sbjct: 286 EEEEEEEEEEEEEEEEEEEEEAAPDVIFQE--DTSHTSAQKAPELRG-PESPSPKPEYSV 342
Query: 141 L 141
+
Sbjct: 343 I 343
>gi|209862789 microtubule associated monoxygenase, calponin and LIM
domain containing 3 isoform 1 [Homo sapiens]
Length = 2002
Score = 34.7 bits (78), Expect = 0.13
Identities = 38/158 (24%), Positives = 64/158 (40%), Gaps = 20/158 (12%)
Query: 198 SSLEYRASSRLKEL-AAPKIRDNFWSMPMSEVSQVSRAAQMAVPSSRILQLSKPKAPATL 256
+ LE R S ++L A+PK ++ S S + +A + +P +P+T
Sbjct: 1127 AELELRVSEDEEKLPASPKHQERGPSQATSPIRSPQESALLFIPVH---------SPSTE 1177
Query: 257 LEEWDPVPKPKPHVSDHNRLLHLARPKAQSDKCVPDRDPRWEVLDVTKKVVASPRIISLA 316
+ PVP S RL + +P P+ + K V + R +
Sbjct: 1178 GPQLPPVPAATQEKSPEERLF--------PEPLLPKEKPKADAPSDLKAVHSPIRSQPVT 1229
Query: 317 KPKVRKGLNEGYDR-RPLASMSLPPPKASPEKCDQPRP 353
P+ R ++ G + +P + S PPP P C QP+P
Sbjct: 1230 LPEARTPVSPGSPQPQPPVAASTPPPSPLPI-CSQPQP 1266
Score = 30.0 bits (66), Expect = 3.3
Identities = 27/93 (29%), Positives = 36/93 (38%), Gaps = 11/93 (11%)
Query: 11 NQPSSEAAGRSEREQDGDPRGLQSSVYESRRVTDPERQDLDNAELGPEDPEEELPPEEVA 70
N ++ A +ER GL+ R PER +L+N L E A
Sbjct: 854 NGRANAVASSTERTPGSGVNGLEEPSIAKRLRGTPERIELENYRLSLRQAE--------A 905
Query: 71 GEEFPETLDPKEALSELERVLDKDLEEDIPEIS 103
+E PE + LS VLD EED+ S
Sbjct: 906 LQEVPEETQAEHNLSS---VLDTGAEEDVASSS 935
>gi|115430231 REC8 homolog [Homo sapiens]
Length = 547
Score = 34.7 bits (78), Expect = 0.13
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 13/64 (20%)
Query: 45 PERQDLDNAELGPEDPEEELPPEEVAGEEFPETLDPKEALSELE----RVLDKDLEEDIP 100
PER + E+ PE P E PE + P T+ P EA++ LE R+L+ + E ++P
Sbjct: 164 PERVE----EIPPEVPTEPREPERI-----PVTVLPPEAITILEAEPIRMLEIEGERELP 214
Query: 101 EISR 104
E+SR
Sbjct: 215 EVSR 218
>gi|115430229 REC8 homolog [Homo sapiens]
Length = 547
Score = 34.7 bits (78), Expect = 0.13
Identities = 24/64 (37%), Positives = 36/64 (56%), Gaps = 13/64 (20%)
Query: 45 PERQDLDNAELGPEDPEEELPPEEVAGEEFPETLDPKEALSELE----RVLDKDLEEDIP 100
PER + E+ PE P E PE + P T+ P EA++ LE R+L+ + E ++P
Sbjct: 164 PERVE----EIPPEVPTEPREPERI-----PVTVLPPEAITILEAEPIRMLEIEGERELP 214
Query: 101 EISR 104
E+SR
Sbjct: 215 EVSR 218
>gi|187173290 troponin T1, skeletal, slow isoform b [Homo sapiens]
Length = 262
Score = 34.3 bits (77), Expect = 0.17
Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 21/136 (15%)
Query: 49 DLDNAELGPEDPEEELPPEEVAGEEFPETL-DPKEALSELER-VLDKDLEEDIPEISRLS 106
D + E E PEEE EE E PE + +P+E + R V+ + IPE R+
Sbjct: 3 DTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGERVD 62
Query: 107 ISQKLPSTTMTKARKRRRRRRLMELAEPKINWQVLKDRPSVYWTERFLEDTTLTITVPAV 166
++R + L+EL Q L D V++ +R E+ L +
Sbjct: 63 FDD---------IHRKRMEKDLLEL-------QTLID---VHFEQRKKEEEELVALKERI 103
Query: 167 SRRVEELSRPKRFYLE 182
RR E + +RF E
Sbjct: 104 ERRRSERAEQQRFRTE 119
Score = 30.4 bits (67), Expect = 2.5
Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 10/99 (10%)
Query: 45 PERQDLDNAELGPEDPEEELPPEEVAGEE----FPETLDPKEALSE---LERVLDKDLEE 97
PE + + E PE+PE PEE + P + PK E + + K +E+
Sbjct: 14 PEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGERVDFDDIHRKRMEK 73
Query: 98 DIPEISRL---SISQKLPSTTMTKARKRRRRRRLMELAE 133
D+ E+ L Q+ A K R RR E AE
Sbjct: 74 DLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAE 112
>gi|187173288 troponin T1, skeletal, slow isoform a [Homo sapiens]
Length = 278
Score = 34.3 bits (77), Expect = 0.17
Identities = 37/136 (27%), Positives = 56/136 (41%), Gaps = 21/136 (15%)
Query: 49 DLDNAELGPEDPEEELPPEEVAGEEFPETL-DPKEALSELER-VLDKDLEEDIPEISRLS 106
D + E E PEEE EE E PE + +P+E + R V+ + IPE R+
Sbjct: 3 DTEEQEYEEEQPEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGERVD 62
Query: 107 ISQKLPSTTMTKARKRRRRRRLMELAEPKINWQVLKDRPSVYWTERFLEDTTLTITVPAV 166
++R + L+EL Q L D V++ +R E+ L +
Sbjct: 63 FDD---------IHRKRMEKDLLEL-------QTLID---VHFEQRKKEEEELVALKERI 103
Query: 167 SRRVEELSRPKRFYLE 182
RR E + +RF E
Sbjct: 104 ERRRSERAEQQRFRTE 119
Score = 30.4 bits (67), Expect = 2.5
Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 10/99 (10%)
Query: 45 PERQDLDNAELGPEDPEEELPPEEVAGEE----FPETLDPKEALSE---LERVLDKDLEE 97
PE + + E PE+PE PEE + P + PK E + + K +E+
Sbjct: 14 PEEEAAEEEEEAPEEPEPVAEPEEERPKPSRPVVPPLIPPKIPEGERVDFDDIHRKRMEK 73
Query: 98 DIPEISRL---SISQKLPSTTMTKARKRRRRRRLMELAE 133
D+ E+ L Q+ A K R RR E AE
Sbjct: 74 DLLELQTLIDVHFEQRKKEEEELVALKERIERRRSERAE 112
>gi|95147555 microtubule-associated protein 1A [Homo sapiens]
Length = 2803
Score = 34.3 bits (77), Expect = 0.17
Identities = 26/110 (23%), Positives = 59/110 (53%), Gaps = 13/110 (11%)
Query: 15 SEAAGRSEREQDGDPRGLQ---SSVYESRRVTDPERQDLDNAELG-------PEDPEEEL 64
+EA + ++ + R L+ +++ + + +P+ +DL+ + PE+ ++ L
Sbjct: 1398 NEAVKQQDKALEQKGRDLEQKDTALEQKDKALEPKDKDLEEKDKALEQKDKIPEEKDKAL 1457
Query: 65 PPEEVAGEEFPETLDPKEA-LSELERVLDKDLEEDIPEISRLSISQKLPS 113
++ A E+ + L+PK+ L + +RVL++ +E IPE ++ QK+ S
Sbjct: 1458 EQKDTALEQKDKALEPKDKDLEQKDRVLEQ--KEKIPEEKDKALDQKVRS 1505
>gi|71061446 zinc finger protein, X-linked [Homo sapiens]
Length = 805
Score = 33.9 bits (76), Expect = 0.23
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 9 LGNQPSS--EAAGRSEREQDGDPRGLQSSVYESRRVTDPERQDLDNAELGPEDPE----- 61
L +P+S +A G DGD + V E+ V+D D+ P+DP+
Sbjct: 8 LQQEPNSFFDATGADGTHMDGDQ--IVVEVQETVFVSDVVDSDITVHNFVPDDPDSVVIQ 65
Query: 62 ---EELPPEEVAGEEFPETLDPKEALSELERVLDKDLEEDIPEISRLSISQKLPSTTMTK 118
E++ E+V + E D E + E+VLD D+ E++ ++ ++ + ++ +T
Sbjct: 66 DVIEDVVIEDVQCPDIMEEADVSETVIIPEQVLDSDVTEEV-SLAHCTVPDDVLASDITS 124
Query: 119 A 119
A
Sbjct: 125 A 125
>gi|17136078 VGF nerve growth factor inducible precursor [Homo
sapiens]
Length = 615
Score = 33.9 bits (76), Expect = 0.23
Identities = 24/83 (28%), Positives = 36/83 (43%), Gaps = 4/83 (4%)
Query: 57 PEDPEEELPPEEVAGEEFPETLDPKEALSELERVLDKDLEEDIPEISRLSISQKLPSTTM 116
PE PE PP E PE DP E L L +L ++L + P ++ Q+ +
Sbjct: 129 PESPEPAAPPRPQTPENGPEASDPSEELEALASLL-QELRDFSPSSAK---RQQETAAAE 184
Query: 117 TKARKRRRRRRLMELAEPKINWQ 139
T+ R R +E P+ W+
Sbjct: 185 TETRTHTLTRVNLESPGPERVWR 207
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.312 0.130 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,010,244
Number of Sequences: 37866
Number of extensions: 832124
Number of successful extensions: 3467
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 152
Number of HSP's that attempted gapping in prelim test: 3221
Number of HSP's gapped (non-prelim): 346
length of query: 355
length of database: 18,247,518
effective HSP length: 103
effective length of query: 252
effective length of database: 14,347,320
effective search space: 3615524640
effective search space used: 3615524640
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.