Guide to the Human Genome
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Name: C17orf85 Sequence: fasta or formatted (340aa) NCBI GI: 8923771
Description:

ELG protein isoform b

Not currently referenced in the text

Other entries for this name:
alt prot {620aa} ELG protein isoform a
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.7         16           1
 C cysteine            0.0          0           0
 D aspartate           7.1         24           2
 E glutamate          12.1         41          16
 F phenylalanine       0.6          2           1
 G glycine             4.7         16           2
 H histidine           2.6          9           1
 I isoleucine          3.5         12           1
 K lysine              9.1         31           2
 L leucine             6.5         22           2
 M methionine          2.6          9           1
 N asparagine          3.8         13           1
 P proline             5.9         20           2
 Q glutamine           3.2         11           1
 R arginine            9.7         33           2
 S serine             13.2         45           3
 T threonine           2.4          8           1
 V valine              5.0         17           3
 W tryptophan          0.9          3           1
 Y tyrosine            2.4          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ELG protein isoform b 
C17orf85              1.000   ELG protein isoform a 
SETD1B                0.045   SET domain containing 1B 
ZRANB2                0.045   zinc finger protein 265 isoform 1 
PELP1                 0.041   proline, glutamic acid and leucine rich protein 1 [...
ZRANB2                0.041   zinc finger protein 265 isoform 2 
ACIN1                 0.041   apoptotic chromatin condensation inducer 1 
MYT1                  0.040   myelin transcription factor 1 
OS9                   0.038   osteosarcoma amplified 9 isoform 4 precursor 
YTHDC1                0.037   splicing factor YT521-B isoform 2 
NPM2                  0.037   nucleoplasmin 2 
SR140                 0.035   U2-associated SR140 protein 
SFRS12                0.035   splicing factor, arginine/serine-rich 12 isoform a ...
SFRS12                0.035   splicing factor, arginine/serine-rich 12 isoform b [...
OS9                   0.034   osteosarcoma amplified 9 isoform 1 precursor 
PRKCSH                0.034   protein kinase C substrate 80K-H isoform 1 
PRG2                  0.034   plasticity-related protein 2 
YTHDC1                0.034   splicing factor YT521-B isoform 1 
TTBK1                 0.034   tau tubulin kinase 1 
MYST3                 0.034   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.034   MYST histone acetyltransferase (monocytic leukemia)...
MYST3                 0.034   MYST histone acetyltransferase (monocytic leukemia)...
RANGAP1               0.034   Ran GTPase activating protein 1 
EIF5B                 0.034   eukaryotic translation initiation factor 5B 
RBM28                 0.034   RNA binding motif protein 28 
OS9                   0.032   osteosarcoma amplified 9 isoform 3 precursor 
NPM1                  0.032   nucleophosmin 1 isoform 3 
NPM1                  0.032   nucleophosmin 1 isoform 1 
DNMT1                 0.032   DNA (cytosine-5-)-methyltransferase 1 isoform a [Ho...
DNMT1                 0.032   DNA (cytosine-5-)-methyltransferase 1 isoform b [Homo...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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