PDPN 32720

Name: PDPN	Sequence: fasta or formatted (120aa)		NCBI GI: 54792060
Description: lung type-I cell membrane-associated glycoprotein isoform c		Referenced in: Lung
Other entries for this name: alt prot [238aa] lung type-I cell membrane-associated glycoprotein isoform a alt prot [236aa] lung type-I cell membrane-associated glycoprotein isoform b alt prot [118aa] lung type-I cell membrane-associated glycoprotein isoform d
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.7 8 1 C cysteine 0.0 0 0 D aspartate 5.8 7 2 E glutamate 5.8 7 1 F phenylalanine 0.8 1 1 G glycine 9.2 11 1 H histidine 1.7 2 1 I isoleucine 6.7 8 2 K lysine 3.3 4 1 L leucine 5.8 7 2 M methionine 2.5 3 1 N asparagine 1.7 2 1 P proline 4.2 5 1 Q glutamine 2.5 3 1 R arginine 3.3 4 1 S serine 11.7 14 1 T threonine 13.3 16 2 V valine 13.3 16 3 W tryptophan 0.0 0 0 Y tyrosine 1.7 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lung type-I cell membrane-associated glycoprotein is... PDPN 1.000 lung type-I cell membrane-associated glycoprotein is... PDPN 0.966 lung type-I cell membrane-associated glycoprotein is... PDPN 0.966 lung type-I cell membrane-associated glycoprotein is... LOC729792 0.049 PREDICTED: hypothetical protein LOC729792 0.049 PREDICTED: hypothetical protein LOC729792 0.049 PREDICTED: hypothetical protein LOC100294501 0.049 PREDICTED: hypothetical protein LOC100294249 0.049 PREDICTED: hypothetical protein XP_002344067 LOC100294238 0.049 PREDICTED: hypothetical protein LOC100294204 0.049 PREDICTED: hypothetical protein LOC100294136 0.049 PREDICTED: hypothetical protein LOC100294091 0.049 PREDICTED: hypothetical protein LOC730401 0.049 PREDICTED: hypothetical protein ZXDC 0.039 ZXD family zinc finger C isoform 2 ZXDC 0.039 ZXD family zinc finger C isoform 1 FN1 0.034 fibronectin 1 isoform 3 preproprotein FN1 0.034 fibronectin 1 isoform 1 preproprotein FN1 0.034 fibronectin 1 isoform 4 preproprotein FN1 0.034 fibronectin 1 isoform 5 preproprotein FN1 0.034 fibronectin 1 isoform 2 preproprotein FN1 0.034 fibronectin 1 isoform 6 preproprotein QSER1 0.029 glutamine and serine rich 1 CEACAM4 0.029 carcinoembryonic antigen-related cell adhesion molec... MIER1 0.029 mesoderm induction early response 1 isoform g [Homo... MIER1 0.029 mesoderm induction early response 1 isoform i [Homo... MIER1 0.029 mesoderm induction early response 1 isoform h [Homo... MIER1 0.029 mesoderm induction early response 1 isoform a [Homo... MIER1 0.029 mesoderm induction early response 1 isoform f [Homo... MIER1 0.029 mesoderm induction early response 1 isoform e [Homo... Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.