PDPN 32718

Name: PDPN	Sequence: fasta or formatted (238aa)		NCBI GI: 54792056
Description: lung type-I cell membrane-associated glycoprotein isoform a		Referenced in: Lung
Other entries for this name: alt prot [236aa] lung type-I cell membrane-associated glycoprotein isoform b alt prot [120aa] lung type-I cell membrane-associated glycoprotein isoform c alt prot [118aa] lung type-I cell membrane-associated glycoprotein isoform d
Composition: Amino acid Percentage Count Longest homopolymer A alanine 8.4 20 1 C cysteine 0.4 1 1 D aspartate 3.8 9 2 E glutamate 5.5 13 1 F phenylalanine 2.5 6 1 G glycine 9.2 22 2 H histidine 0.8 2 1 I isoleucine 4.2 10 2 K lysine 2.9 7 1 L leucine 10.1 24 3 M methionine 2.1 5 1 N asparagine 1.7 4 2 P proline 8.0 19 3 Q glutamine 2.5 6 1 R arginine 4.6 11 1 S serine 10.9 26 2 T threonine 10.5 25 2 V valine 9.2 22 3 W tryptophan 1.7 4 1 Y tyrosine 0.8 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 lung type-I cell membrane-associated glycoprotein is... PDPN 0.984 lung type-I cell membrane-associated glycoprotein is... PDPN 0.465 lung type-I cell membrane-associated glycoprotein is... PDPN 0.449 lung type-I cell membrane-associated glycoprotein is... LOC729792 0.029 PREDICTED: hypothetical protein LOC729792 0.029 PREDICTED: hypothetical protein LOC729792 0.029 PREDICTED: hypothetical protein LOC100294501 0.029 PREDICTED: hypothetical protein LOC100294249 0.029 PREDICTED: hypothetical protein XP_002344067 LOC100294238 0.029 PREDICTED: hypothetical protein LOC100294204 0.029 PREDICTED: hypothetical protein LOC100294136 0.029 PREDICTED: hypothetical protein LOC100294091 0.029 PREDICTED: hypothetical protein LOC730401 0.029 PREDICTED: hypothetical protein QSER1 0.023 glutamine and serine rich 1 SDC2 0.020 syndecan 2 precursor NAV2 0.018 neuron navigator 2 isoform 3 NAV2 0.018 neuron navigator 2 isoform 1 NAV2 0.018 neuron navigator 2 isoform 2 ZXDC 0.018 ZXD family zinc finger C isoform 2 ZXDC 0.018 ZXD family zinc finger C isoform 1 FN1 0.016 fibronectin 1 isoform 3 preproprotein FN1 0.016 fibronectin 1 isoform 1 preproprotein FN1 0.016 fibronectin 1 isoform 4 preproprotein FN1 0.016 fibronectin 1 isoform 5 preproprotein FN1 0.016 fibronectin 1 isoform 2 preproprotein FN1 0.016 fibronectin 1 isoform 6 preproprotein FJX1 0.016 four jointed box 1 QSOX2 0.016 quiescin Q6 sulfhydryl oxidase 2 LOC100130716 0.016 PREDICTED: similar to mucin 11 Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.