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Search of human proteins with 40538736
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40538736 RAN binding protein 10 [Homo sapiens]
(620 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40538736 RAN binding protein 10 [Homo sapiens] 1274 0.0
gi|39812378 RAN binding protein 9 [Homo sapiens] 848 0.0
gi|14249554 SPRY domain containing 3 [Homo sapiens] 85 2e-16
gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens] 62 1e-09
gi|37588869 ring finger protein 123 [Homo sapiens] 58 3e-08
gi|169658378 trinucleotide repeat containing 18 [Homo sapiens] 57 5e-08
gi|95147342 chromodomain helicase DNA binding protein 9 [Homo sa... 54 4e-07
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 50 6e-06
gi|161016767 mucin 21 [Homo sapiens] 50 8e-06
gi|167234419 thyroid hormone receptor associated protein 3 [Homo... 49 1e-05
gi|4826686 DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Homo sapiens] 49 2e-05
gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithora... 49 2e-05
gi|33356174 pinin, desmosome associated protein [Homo sapiens] 49 2e-05
gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithor... 48 2e-05
gi|58530876 melanoma antigen family C, 1 [Homo sapiens] 47 5e-05
gi|8923106 zinc finger, CCHC domain containing 10 [Homo sapiens] 47 7e-05
gi|8923557 chromosome 20 open reading frame 11 [Homo sapiens] 47 7e-05
gi|126032338 ryanodine receptor 3 [Homo sapiens] 46 9e-05
gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo ... 45 2e-04
gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo ... 45 2e-04
gi|157412282 ash2-like isoform b [Homo sapiens] 45 3e-04
gi|157412280 ash2-like isoform a [Homo sapiens] 45 3e-04
gi|58219064 Src homology 2 domain containing E [Homo sapiens] 45 3e-04
gi|112799847 cardiac muscle ryanodine receptor [Homo sapiens] 44 3e-04
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 44 4e-04
gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [H... 44 6e-04
gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens] 44 6e-04
gi|169166609 PREDICTED: similar to ribonucleic acid binding prot... 43 8e-04
gi|113415994 PREDICTED: similar to ribonucleic acid binding prot... 43 8e-04
gi|113415504 PREDICTED: similar to ribonucleic acid binding prot... 43 8e-04
>gi|40538736 RAN binding protein 10 [Homo sapiens]
Length = 620
Score = 1274 bits (3296), Expect = 0.0
Identities = 620/620 (100%), Positives = 620/620 (100%)
Query: 1 MAAATADPGAGNPQPGDSSGGGAGGGLPSPGEQELSRRLQRLYPAVNQQETPLPRSWSPK 60
MAAATADPGAGNPQPGDSSGGGAGGGLPSPGEQELSRRLQRLYPAVNQQETPLPRSWSPK
Sbjct: 1 MAAATADPGAGNPQPGDSSGGGAGGGLPSPGEQELSRRLQRLYPAVNQQETPLPRSWSPK 60
Query: 61 DKYNYIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGI 120
DKYNYIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGI
Sbjct: 61 DKYNYIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGI 120
Query: 121 GLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTC 180
GLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTC
Sbjct: 121 GLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTC 180
Query: 181 FYTKNGHSLGIAFTDLPANLYPTVGLQTPGEIVDANFGQQPFLFDIEDYMREWRAKVQGT 240
FYTKNGHSLGIAFTDLPANLYPTVGLQTPGEIVDANFGQQPFLFDIEDYMREWRAKVQGT
Sbjct: 181 FYTKNGHSLGIAFTDLPANLYPTVGLQTPGEIVDANFGQQPFLFDIEDYMREWRAKVQGT 240
Query: 241 VHCFPISARLGEWQAVLQNMVSSYLVHHGYCATATAFARMTETPIQEEQASIKNRQKIQK 300
VHCFPISARLGEWQAVLQNMVSSYLVHHGYCATATAFARMTETPIQEEQASIKNRQKIQK
Sbjct: 241 VHCFPISARLGEWQAVLQNMVSSYLVHHGYCATATAFARMTETPIQEEQASIKNRQKIQK 300
Query: 301 LVLEGRVGEAIETTQRFYPGLLEHNPNLLFMLKCRQFVEMVNGTDSEVRSLSSRSPKSQD 360
LVLEGRVGEAIETTQRFYPGLLEHNPNLLFMLKCRQFVEMVNGTDSEVRSLSSRSPKSQD
Sbjct: 301 LVLEGRVGEAIETTQRFYPGLLEHNPNLLFMLKCRQFVEMVNGTDSEVRSLSSRSPKSQD 360
Query: 361 SYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSS 420
SYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSS
Sbjct: 361 SYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSS 420
Query: 421 SSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPNGVLGSMSTRIVNGAYK 480
SSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPNGVLGSMSTRIVNGAYK
Sbjct: 421 SSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPNGVLGSMSTRIVNGAYK 480
Query: 481 HEDLQTDESSMDDRHPRRQLCGGNQAATERIILFGRELQALSEQLGREYGKNLAHTEMLQ 540
HEDLQTDESSMDDRHPRRQLCGGNQAATERIILFGRELQALSEQLGREYGKNLAHTEMLQ
Sbjct: 481 HEDLQTDESSMDDRHPRRQLCGGNQAATERIILFGRELQALSEQLGREYGKNLAHTEMLQ 540
Query: 541 DAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLALGQASECLR 600
DAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLALGQASECLR
Sbjct: 541 DAFSLLAYSDPWSCPVGQQLDPIQREPVCAALNSAILESQNLPKQPPLMLALGQASECLR 600
Query: 601 LMARAGLGSCSFARVDDYLH 620
LMARAGLGSCSFARVDDYLH
Sbjct: 601 LMARAGLGSCSFARVDDYLH 620
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 848 bits (2191), Expect = 0.0
Identities = 435/658 (66%), Positives = 499/658 (75%), Gaps = 61/658 (9%)
Query: 3 AATADPGAGNPQP-GDSSGGGAGGGLPSPG---------------------EQELSRRLQ 40
A+ A P +G P P G ++G G GG P+P E+EL RRL+
Sbjct: 93 ASAAAPASGPPAPPGLAAGPGPAGGAPTPALVAGSSAAAPFPHGDSALNEQEKELQRRLK 152
Query: 41 RLYPAVNQQETPLPRSWSPKDKYNYIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAAC 100
RLYPAV++QETPLPRSWSPKDK++YIGLSQ NLRVHYKGHGK KDAASVRATHPIPAAC
Sbjct: 153 RLYPAVDEQETPLPRSWSPKDKFSYIGLSQNNLRVHYKGHGKTPKDAASVRATHPIPAAC 212
Query: 101 GIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYG 160
GIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYG
Sbjct: 213 GIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYG 272
Query: 161 PTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPANLYPTVGLQTPGEIVDANFGQQ 220
PTFTTGDVIGCCVNLIN TCFYTKNGHSLGIAFTDLP NLYPTVGLQTPGE+VDANFGQ
Sbjct: 273 PTFTTGDVIGCCVNLINNTCFYTKNGHSLGIAFTDLPPNLYPTVGLQTPGEVVDANFGQH 332
Query: 221 PFLFDIEDYMREWRAKVQGTVHCFPISARLGEWQAVLQNMVSSYLVHHGYCATATAFARM 280
PF+FDIEDYMREWR K+Q + FPI R GEWQ ++Q MVSSYLVHHGYCATA AFAR
Sbjct: 333 PFVFDIEDYMREWRTKIQAQIDRFPIGDREGEWQTMIQKMVSSYLVHHGYCATAEAFARS 392
Query: 281 TETPIQEEQASIKNRQKIQKLVLEGRVGEAIETTQRFYPGLLEHNPNLLFMLKCRQFVEM 340
T+ + EE ASIKNRQ+IQKLVL GR+GEAIETTQ+ YP LLE NPNLLF LK RQF+EM
Sbjct: 393 TDQTVLEELASIKNRQRIQKLVLAGRMGEAIETTQQLYPSLLERNPNLLFTLKVRQFIEM 452
Query: 341 VNGTDSEVRSLSSRSPKSQDSYP------GSPSLSPRHGPS--------SSHMHNTGADS 386
VNGTDSEVR L RSPKSQDSYP SPS+SP HG + S H +G +
Sbjct: 453 VNGTDSEVRCLGGRSPKSQDSYPVSPRPFSSPSMSPSHGMNIHNLASGKGSTAHFSGFE- 511
Query: 387 PSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQH-HSST 445
SCSNGV S K+ Q++ S+ S++N E NS + ++SQ ++ T
Sbjct: 512 -SCSNGVISNKAHQSY-------------CHSNKHQSSNLNVPELNSINMSRSQQVNNFT 557
Query: 446 SNQETSDSEMEMEAEHYPNGVLGSMSTRIVNGAYKHEDLQTD---ESSMDDRHPRRQLCG 502
SN +++ME +HY NGV + S +NG+ KH+ D E +D RRQLCG
Sbjct: 558 SN------DVDMETDHYSNGVGETSSNGFLNGSSKHDHEMEDCDTEMEVDSSQLRRQLCG 611
Query: 503 GNQAATERIILFGRELQALSEQLGREYGKNLAHTEMLQDAFSLLAYSDPWSCPVGQQLDP 562
G+QAA ER+I FGRELQA+SEQL R+ GKN A+ +ML+DAFSLLAYSDPW+ PVG QLDP
Sbjct: 612 GSQAAIERMIHFGRELQAMSEQLRRDCGKNTANKKMLKDAFSLLAYSDPWNSPVGNQLDP 671
Query: 563 IQREPVCAALNSAILESQNLPKQPPLMLALGQASECLRLMARAGLGSCSFARVDDYLH 620
IQREPVC+ALNSAILE+ NLPKQPPL LA+GQA++CL LMAR+G+GSC+FA V+DYLH
Sbjct: 672 IQREPVCSALNSAILETHNLPKQPPLALAMGQATQCLGLMARSGIGSCAFATVEDYLH 729
>gi|14249554 SPRY domain containing 3 [Homo sapiens]
Length = 442
Score = 85.1 bits (209), Expect = 2e-16
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 75 VHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG 134
+ Y G GK+ D +A HP+ +YFEV+IV G Y+ +GL+ + NR PG
Sbjct: 233 LEYLGKGKSIVDVGLAQARHPLSTRS--HYFEVEIVDPGEKCYIALGLARKDYPKNRHPG 290
Query: 135 WDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGC 171
W + S YH DDG F SG G P+GP GD++GC
Sbjct: 291 WSRGSVAYHADDGKIFHGSGVGDPFGPRCYKGDIMGC 327
Score = 78.2 bits (191), Expect = 2e-14
Identities = 49/165 (29%), Positives = 81/165 (49%), Gaps = 12/165 (7%)
Query: 104 YFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTF 163
YFEV IV G G + +GL Q +++ PGW S YH DDG + G+ +G
Sbjct: 80 YFEVSIVDSGVRGTIAVGLVPQYYSLDHQPGWLPDSVAYHADDGKLYNGRAKGRQFGSKC 139
Query: 164 TTGDVIGCCVNLIN-----GTCFYTKNGHSLGIAFTDL-PANLYPTVGLQTPGEIV---- 213
+GD IGC + ++ F+TKNG +G + P L+P VG+ + GE V
Sbjct: 140 NSGDRIGCGIEPVSFDVQTAQIFFTKNGKRVGSTIMPMSPDGLFPAVGMHSLGEEVRLHL 199
Query: 214 DANFGQQ-PFLFDIEDYMREWRAKVQGTVHCFPISARLGEWQAVL 257
+A G++ + ++ Y EW ++ C + LG+ ++++
Sbjct: 200 NAELGREDDSVMMVDSYEDEW-GRLHDVRVCGTLLEYLGKGKSIV 243
>gi|89001107 dentin sialophosphoprotein preproprotein [Homo sapiens]
Length = 1301
Score = 62.4 bits (150), Expect = 1e-09
Identities = 49/150 (32%), Positives = 76/150 (50%), Gaps = 4/150 (2%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNT-GADSPSCSNGVASTKSKQ 400
N +DS S SS S S DS + S S SS +++ +DS S+G S S +
Sbjct: 799 NSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNR 858
Query: 401 NHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAE 460
+ S + SS SS SS+SS SS SS + SNS+DS+ S S++S+ ++SDS ++
Sbjct: 859 SDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDS---SNSSDSDSSDSSNSSDSS 915
Query: 461 HYPNGVLGSMSTRIVNGAYKHEDLQTDESS 490
N S S+ + + + + +SS
Sbjct: 916 DSSNSSDSSESSNSSDNSNSSDSSNSSDSS 945
Score = 61.6 bits (148), Expect = 2e-09
Identities = 48/150 (32%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
N +DS S SS S S DS S S SS N+ S S + +S S +
Sbjct: 1017 NSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSS 1076
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSN-QETSDSEMEMEAE 460
S + SS SS SS+SS SS SS + S+S+DS+ S S +SN ++SDS ++
Sbjct: 1077 DSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSS 1136
Query: 461 HYPNGVLGSMSTRIVNGAYKHEDLQTDESS 490
N S S+ + + + + +SS
Sbjct: 1137 DSSNSSDSSDSSESSDSSDSSDSSDSSDSS 1166
Score = 60.1 bits (144), Expect = 6e-09
Identities = 49/155 (31%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
+ +DS S SS S S DS S S SS+ ++ S S + +S S +
Sbjct: 1143 DSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSS 1202
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSN-QETSDSEMEMEAE 460
S + SS SS SS SS SS SS + + S+DS+ S S +SN ++SDS ++
Sbjct: 1203 DSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSSDSSDSSDST 1262
Query: 461 HYPNGVLGSMSTRIVNGAYKHEDLQTDESSMDDRH 495
N S S + NG D +D D H
Sbjct: 1263 SDSNDESDSQS-KSGNGNNNGSDSDSDSEGSDSNH 1296
Score = 59.7 bits (143), Expect = 8e-09
Identities = 47/147 (31%), Positives = 69/147 (46%), Gaps = 1/147 (0%)
Query: 344 TDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHS 403
+DS RS SS S S DS S S S S S+ + +DS SN S S ++S
Sbjct: 853 SDSSNRSDSSNSSDSSDSSDSSNS-SDSSDSSDSNESSNSSDSSDSSNSSDSDSSDSSNS 911
Query: 404 KYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYP 463
+ SS+SS SS SS+SS +S + SNS+DS+ S S++S+ S
Sbjct: 912 SDSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDS 971
Query: 464 NGVLGSMSTRIVNGAYKHEDLQTDESS 490
N S S+ + + + + +SS
Sbjct: 972 NSSDSSDSSNSSDSSDSSDSSDSSDSS 998
Score = 59.3 bits (142), Expect = 1e-08
Identities = 44/148 (29%), Positives = 68/148 (45%)
Query: 346 SEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKY 405
S S S S S DS S S SS+ ++ S S ++ +S S + S
Sbjct: 719 SNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSD 778
Query: 406 PAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPNG 465
+ SS S+ SS+SS SS SS + SNS+DS+ S S + + +SDS ++ N
Sbjct: 779 SSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNS 838
Query: 466 VLGSMSTRIVNGAYKHEDLQTDESSMDD 493
S S+ +G+ ++D S+ D
Sbjct: 839 SDSSDSSDSSDGSDSDSSNRSDSSNSSD 866
Score = 58.9 bits (141), Expect = 1e-08
Identities = 47/149 (31%), Positives = 73/149 (48%), Gaps = 7/149 (4%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
N +DS S S+ S S DS S S S S + +DS SN +S S+ +
Sbjct: 875 NSSDSSDSSDSNESSNSSDSSDSSNS-----SDSDSSDSSNSSDSSDSSN--SSDSSESS 927
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEH 461
+S + SS SS+SS SS SS SS + SNS+DS+ S S +++ ++SDS ++
Sbjct: 928 NSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSNSSDSSDSSNSSDSSD 987
Query: 462 YPNGVLGSMSTRIVNGAYKHEDLQTDESS 490
+ S S+ N + + + +SS
Sbjct: 988 SSDSSDSSDSSDSSNSSDSSDSSDSSDSS 1016
Score = 58.9 bits (141), Expect = 1e-08
Identities = 46/150 (30%), Positives = 73/150 (48%), Gaps = 1/150 (0%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
+ +DS S SS S S DS S S + SS+ ++ S S + +S S +
Sbjct: 987 DSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSS 1046
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSN-QETSDSEMEMEAE 460
S + SS+SS SS SS SS SS + S+S+DS++S S +SN ++SDS ++
Sbjct: 1047 DSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSS 1106
Query: 461 HYPNGVLGSMSTRIVNGAYKHEDLQTDESS 490
+ S S+ N + + + +SS
Sbjct: 1107 DSSDSSDSSDSSDSSNSSDSSDSSDSSDSS 1136
Score = 58.5 bits (140), Expect = 2e-08
Identities = 44/119 (36%), Positives = 60/119 (50%), Gaps = 7/119 (5%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
+ +DS S SS S S DS S S + S S ++ +DS S S+ S+ S N
Sbjct: 594 DSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDN 653
Query: 402 -------HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDS 453
+S + SS SS SS SSSSS SS + S+S+DS+ S S +S+ SDS
Sbjct: 654 SDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDS 712
Score = 58.5 bits (140), Expect = 2e-08
Identities = 43/128 (33%), Positives = 62/128 (48%)
Query: 344 TDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHS 403
+DS S SS S S DS S S + SS N+ S S + +S S + S
Sbjct: 726 SDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDS 785
Query: 404 KYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYP 463
+ SS SS SS+SS SS SS + S+S+DS S S+++ ++SDS ++
Sbjct: 786 NDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSS 845
Query: 464 NGVLGSMS 471
+ GS S
Sbjct: 846 DSSDGSDS 853
Score = 58.5 bits (140), Expect = 2e-08
Identities = 41/115 (35%), Positives = 60/115 (52%), Gaps = 1/115 (0%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
+ +DS S SS S S D+ S S + SS N+ +DS + S+ S+ S +
Sbjct: 913 DSSDSSNSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNS-SDSSNSSDSSNSSDSSDS 971
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEME 456
+S + SS+SS SS SS SS SS + SNS+DS+ S S +SN S + +
Sbjct: 972 NSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSD 1026
Score = 58.2 bits (139), Expect = 2e-08
Identities = 47/153 (30%), Positives = 69/153 (45%), Gaps = 1/153 (0%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
+ +DS S SS S S DS S S SS ++ + S SN S S +
Sbjct: 673 DSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSS 732
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHS-STSNQETSDSEMEMEAE 460
S + SS SS SS SS+SS SS + SNS+DS+ S S S+ + +SDS +
Sbjct: 733 DSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSS 792
Query: 461 HYPNGVLGSMSTRIVNGAYKHEDLQTDESSMDD 493
+ S S+ + + + +D S+ D
Sbjct: 793 DSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSD 825
Score = 58.2 bits (139), Expect = 2e-08
Identities = 41/115 (35%), Positives = 58/115 (50%), Gaps = 1/115 (0%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
N +DS S SS + S DS S S +SS N+ +DS + S+ S S +
Sbjct: 919 NSSDSSESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNS-SDSSNSSDSSDSNSSDSS 977
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEME 456
S + SS SS SS SS SS SS + S+S+DS+ S + S +SN S + +
Sbjct: 978 DSSNSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSD 1032
Score = 57.8 bits (138), Expect = 3e-08
Identities = 43/116 (37%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Query: 339 EMVNGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKS 398
E N +D+ S SS S S DS S S + SS+ ++ +DS S + +S S
Sbjct: 925 ESSNSSDNSNSSDSSNSSDSSDSSDSSNSSDSSNSSDSSNSSDS-SDSNSSDSSDSSNSS 983
Query: 399 KQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTS-NQETSDS 453
+ S + SS SS SS+SS SS SS + SNS+DS+ S S++S + ++SDS
Sbjct: 984 DSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDS 1039
Score = 56.2 bits (134), Expect = 9e-08
Identities = 46/150 (30%), Positives = 70/150 (46%), Gaps = 1/150 (0%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
N +DS S SS S S +S S S SSS N+ S S + +S S +
Sbjct: 646 NSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSSDSSNSSESSDSS 705
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSN-QETSDSEMEMEAE 460
S S SS SS+S+SS S SS + S+S++S+ S S +SN ++SDS +
Sbjct: 706 DSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSS 765
Query: 461 HYPNGVLGSMSTRIVNGAYKHEDLQTDESS 490
+ S S+ N + ++ + +SS
Sbjct: 766 DSSDSSDSSDSSDSSNSSDSNDSSNSSDSS 795
Score = 56.2 bits (134), Expect = 9e-08
Identities = 45/151 (29%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
Query: 344 TDSEVRSLSSRSPKSQ-DSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNH 402
+DS S SS S S DS S S + SS ++ S S + +S S +
Sbjct: 710 SDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDSSNSSDSSD 769
Query: 403 SKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHY 462
S + SS SS+SS S+ SS SS + SNS+DS+ S S +S+ SDS ++ +
Sbjct: 770 SSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSSNSSDSSNS 829
Query: 463 PNGVLGSMSTRIVNGAYKHEDLQTDESSMDD 493
+ S S+ + + + +D S+ D
Sbjct: 830 SDSSDSSNSSDSSDSSDSSDGSDSDSSNRSD 860
Score = 56.2 bits (134), Expect = 9e-08
Identities = 40/120 (33%), Positives = 60/120 (50%), Gaps = 8/120 (6%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTG--------ADSPSCSNGV 393
N +DS S SS S S DS S S + S+ N+ +DS + S+
Sbjct: 751 NSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSS 810
Query: 394 ASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDS 453
S+ S + S + SS+SS SS SS+SS SS + S+ +DS S S+++ ++SDS
Sbjct: 811 DSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSSDSSDSSDGSDSDSSNRSDSSNSSDSSDS 870
Score = 55.8 bits (133), Expect = 1e-07
Identities = 43/147 (29%), Positives = 62/147 (42%)
Query: 344 TDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHS 403
+DS S S S S S S + SS N+ S S + +S S + S
Sbjct: 702 SDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSSNSSDSSDSSDS 761
Query: 404 KYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYP 463
+ SS SS SS SS SS SS + SNS+DS+ S + S +SN S +
Sbjct: 762 SNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSSNSSDSSDSSDSSDSDSS 821
Query: 464 NGVLGSMSTRIVNGAYKHEDLQTDESS 490
N S S+ + + + + +SS
Sbjct: 822 NSSDSSNSSDSSDSSNSSDSSDSSDSS 848
Score = 55.1 bits (131), Expect = 2e-07
Identities = 49/150 (32%), Positives = 70/150 (46%), Gaps = 7/150 (4%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
N +DS S SS S S DS S S + SS +DS SN +S S +
Sbjct: 972 NSSDSSDSSNSSDSSDSSDSSDSSDSSDSSNSSDSSD----SSDSSDSSN--SSDSSNSS 1025
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHS-STSNQETSDSEMEMEAE 460
S + SS SS SS SS SS SS + SNS+DS+ S S S+ + ++SDS E+
Sbjct: 1026 DSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSESS 1085
Query: 461 HYPNGVLGSMSTRIVNGAYKHEDLQTDESS 490
+ S S+ + + + + +SS
Sbjct: 1086 DSSDSSNSSDSSDSSDSSDSSDSSDSSDSS 1115
Score = 54.7 bits (130), Expect = 3e-07
Identities = 47/149 (31%), Positives = 72/149 (48%), Gaps = 5/149 (3%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
N +DS S SS S S DS S S + SS ++ S S ++ +S S+ +
Sbjct: 1092 NSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSSDSSESS 1151
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEH 461
S + SS SS SS SS SS SS + SNS+DS+ S S +S ++SDS ++
Sbjct: 1152 DS---SDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSSDSS--DSSDSSDSSDSSD 1206
Query: 462 YPNGVLGSMSTRIVNGAYKHEDLQTDESS 490
+ S S+ + + + ++ESS
Sbjct: 1207 SSDSSDSSDSSDSSDSSDSSDSSDSNESS 1235
Score = 54.3 bits (129), Expect = 3e-07
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 2/150 (1%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
+ +DS+ +S SS S S DS S S + +SS ++ S S S+ +S S +
Sbjct: 632 DSSDSDSKSDSSDS-NSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSS 690
Query: 402 HSKYPAPSSSSSSSSSSSSSSPS-SVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAE 460
S + SS SS SS SS S S S + S SNS+DS S S+ + +SDS ++
Sbjct: 691 DSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSSDSSDSS 750
Query: 461 HYPNGVLGSMSTRIVNGAYKHEDLQTDESS 490
+ + S S+ + + + + +SS
Sbjct: 751 NSSDSSDSSDSSNSSDSSDSSDSSDSSDSS 780
Score = 53.9 bits (128), Expect = 4e-07
Identities = 47/158 (29%), Positives = 70/158 (44%), Gaps = 9/158 (5%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSS---------SHMHNTGADSPSCSNG 392
N +DS S SS S +S DS S S S SS S+ ++ S S +
Sbjct: 685 NSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSDSSNSSDSSDSSNSSDSS 744
Query: 393 VASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSD 452
+S S + S + SS+SS SS SS SS SS + + S+S DS+ S S +SN S
Sbjct: 745 DSSDSSNSSDSSDSSDSSNSSDSSDSSDSSDSSDSSNSSDSNDSSNSSDSSDSSNSSDSS 804
Query: 453 SEMEMEAEHYPNGVLGSMSTRIVNGAYKHEDLQTDESS 490
+ + + S S+ N + + + +SS
Sbjct: 805 NSSDSSDSSDSSDSDSSNSSDSSNSSDSSDSSNSSDSS 842
Score = 52.8 bits (125), Expect = 1e-06
Identities = 40/113 (35%), Positives = 57/113 (50%), Gaps = 1/113 (0%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
+ +DS S SS S S +S S S SS ++ S S ++ +S S +
Sbjct: 1074 DSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDSSDSS 1133
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSN-QETSDS 453
S + SS SS SS SS SS SS + S+S+DS+ S S +SN ++SDS
Sbjct: 1134 DSSDSSNSSDSSDSSESSDSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSSDS 1186
Score = 52.0 bits (123), Expect = 2e-06
Identities = 39/118 (33%), Positives = 58/118 (49%), Gaps = 7/118 (5%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
NG D +S S + DS S S SS + +DS S S+ +S +
Sbjct: 532 NGNDDNDKSDSGKG--KSDSSDSDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSD 589
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEA 459
S S SS SS+SS SS SS + S+S+DS+ S+ SS S ++SDS+ + ++
Sbjct: 590 SS-----DSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDS 642
Score = 52.0 bits (123), Expect = 2e-06
Identities = 37/109 (33%), Positives = 57/109 (52%), Gaps = 1/109 (0%)
Query: 346 SEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKY 405
S+ +S SS+S +S S S S S S S ++ +DS + SN S+ S +
Sbjct: 620 SDSKSDSSKS-ESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSS 678
Query: 406 PAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSE 454
+ SS+SS SS SS S +S S+S+ + + S S +SN +SDS+
Sbjct: 679 SSSDSSNSSDSSDSSDSSNSSESSDSSDSSDSDSSDSSDSSNSNSSDSD 727
Score = 51.6 bits (122), Expect = 2e-06
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 2/148 (1%)
Query: 343 GTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNH 402
G S SS S S DS S S S SSS ++ +DS S+ +S S +
Sbjct: 545 GKSDSSDSDSSDSSNSSDSSDSSDSDSSDSN-SSSDSDSSDSDSSDSSDSDSSDSSNSSD 603
Query: 403 SKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHY 462
S + SS SS SS SS S S + SES+S+DS S +++ ++SD+ ++ +
Sbjct: 604 SS-DSSDSSDSSDSSDSSDSKSDSSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNS 662
Query: 463 PNGVLGSMSTRIVNGAYKHEDLQTDESS 490
N S S+ + + + + +SS
Sbjct: 663 SNSSDSSDSSDSSDSSSSSDSSNSSDSS 690
Score = 51.2 bits (121), Expect = 3e-06
Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
N +DS S SS S S DS S S S +SS N+ +DS SN S+ S +
Sbjct: 790 NSSDSSDSSNSSDSSNSSDSSDSSDS-SDSDSSNSSDSSNS-SDSSDSSN---SSDSSDS 844
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSN-QETSDSEMEMEAE 460
S SS+ S SS+SS SS + SNS+DS+ S + +SN ++SDS +++
Sbjct: 845 SDSSDGSDSDSSNRSDSSNSSDSSDSSDSSNSSDSSDSSDSNESSNSSDSSDSSNSSDSD 904
Score = 50.8 bits (120), Expect = 4e-06
Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 1/150 (0%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
N +DS S SS S S DS S S + SS ++ S S + +S S +
Sbjct: 1002 NSSDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSNSSDSS 1061
Query: 402 HSKYPAPSSSSSSSS-SSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAE 460
S + SS SS SS SS SS S + S ++S S S S+ + ++SDS ++
Sbjct: 1062 DSSDSSDSSDSSDSSDSSDSSESSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSDSS 1121
Query: 461 HYPNGVLGSMSTRIVNGAYKHEDLQTDESS 490
+ + S S+ + + + + ESS
Sbjct: 1122 NSSDSSDSSDSSDSSDSSNSSDSSDSSESS 1151
Score = 48.5 bits (114), Expect = 2e-05
Identities = 43/146 (29%), Positives = 63/146 (43%), Gaps = 9/146 (6%)
Query: 352 SSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSS 411
SS S S DS S SS N+ S S + +S S + SK S
Sbjct: 571 SSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSK-----SD 625
Query: 412 SSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSN----QETSDSEMEMEAEHYPNGVL 467
SS S S SS S S + S+SNS+DS+ + S +SN ++SDS ++ +
Sbjct: 626 SSKSESDSSDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSN 685
Query: 468 GSMSTRIVNGAYKHEDLQTDESSMDD 493
S S+ + + E + +SS D
Sbjct: 686 SSDSSDSSDSSNSSESSDSSDSSDSD 711
Score = 48.5 bits (114), Expect = 2e-05
Identities = 43/149 (28%), Positives = 67/149 (44%), Gaps = 6/149 (4%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
+ +DS S SS S S DS S S S + SS N+ S S + +S S +
Sbjct: 943 DSSDSSDSSNSSDSSNSSDSSNSSDS-SDSNSSDSSDSSNSSDSSDSSDSSDSSDSSDSS 1001
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEH 461
+S S SS SS SS SS+ S + S +S S S S+ + ++SDS ++ +
Sbjct: 1002 NS-----SDSSDSSDSSDSSNSSDSSNSSDSSNSSDSSDSSDSSDSSDSSDSSDSSDSSN 1056
Query: 462 YPNGVLGSMSTRIVNGAYKHEDLQTDESS 490
+ S S+ + + + + ESS
Sbjct: 1057 SSDSSDSSDSSDSSDSSDSSDSSDSSESS 1085
Score = 48.1 bits (113), Expect = 2e-05
Identities = 31/103 (30%), Positives = 49/103 (47%)
Query: 352 SSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSS 411
S S +S+D+ GS S S S +DS N K + K + SS
Sbjct: 492 SYNSDESKDNGNGSDSKGAEDDDSDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSD 551
Query: 412 SSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSE 454
S SS SS+SS S + S+S+ ++S+ S + + ++SDS+
Sbjct: 552 SDSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSD 594
Score = 48.1 bits (113), Expect = 2e-05
Identities = 43/132 (32%), Positives = 64/132 (48%), Gaps = 9/132 (6%)
Query: 350 SLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPS 409
S SS S DS S S S+S + +DS S+ S+ SK + SK + S
Sbjct: 574 SNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSDSSDSSDSSDSKSDSSKSESDS 633
Query: 410 SSS--------SSSSSSSSSSPSSVNYSESNSTDSTKSQHHS-STSNQETSDSEMEMEAE 460
S S S+SS SS +S SS + + SNS+DS+ S S S+S+ ++S+S ++
Sbjct: 634 SDSDSKSDSSDSNSSDSSDNSDSSDSSNSSNSSDSSDSSDSSDSSSSSDSSNSSDSSDSS 693
Query: 461 HYPNGVLGSMST 472
N S S+
Sbjct: 694 DSSNSSESSDSS 705
Score = 46.6 bits (109), Expect = 7e-05
Identities = 39/152 (25%), Positives = 68/152 (44%), Gaps = 4/152 (2%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
N +S+ S S ++D S S + S+ + +N D+ +G + S +
Sbjct: 494 NSDESKDNGNGSDSKGAEDDDSDSTS-DTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDS 552
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEH 461
S + SS SS SS S SS +S + S+S+ +DS+ S S+ + +SDS ++
Sbjct: 553 DSSDSSNSSDSSDSSDSDSSDSNSSSDSDSSDSDSSDSSDSDSSDSSNSSDSSDSSDSSD 612
Query: 462 YPNGVLGSMSTRIVNGAYKHEDLQTDESSMDD 493
+ S S+ + + K E +D S D
Sbjct: 613 SSD---SSDSSDSKSDSSKSESDSSDSDSKSD 641
Score = 41.2 bits (95), Expect = 0.003
Identities = 27/128 (21%), Positives = 55/128 (42%), Gaps = 12/128 (9%)
Query: 345 DSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHM------------HNTGADSPSCSNG 392
D + +S+ P S D G+ + +SS + G+DS +
Sbjct: 454 DFDDKSMQGDDPNSSDESNGNDDANSESDNNSSSRGDASYNSDESKDNGNGSDSKGAEDD 513
Query: 393 VASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSD 452
+ + S N+S ++ + + S S + S+S+S+DS+ S S +S+ ++SD
Sbjct: 514 DSDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDSSDSSNSSDSSDSSDSDSSD 573
Query: 453 SEMEMEAE 460
S +++
Sbjct: 574 SNSSSDSD 581
Score = 39.3 bits (90), Expect = 0.011
Identities = 32/107 (29%), Positives = 47/107 (43%), Gaps = 1/107 (0%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
+ +DS S SS S S DS S S SS + + S S + +S S +
Sbjct: 1194 DSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSSDSNESSDSSDSSDSSDSSNSSDSS 1253
Query: 402 HSKYPAPSSSSSSS-SSSSSSSPSSVNYSESNSTDSTKSQHHSSTSN 447
S + S+S S+ S S S S + N + +DS S + STS+
Sbjct: 1254 DSSDSSDSTSDSNDESDSQSKSGNGNNNGSDSDSDSEGSDSNHSTSD 1300
Score = 33.1 bits (74), Expect = 0.78
Identities = 30/112 (26%), Positives = 43/112 (38%), Gaps = 10/112 (8%)
Query: 352 SSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKS----KQNHSKYPA 407
S + DSY P+SS N D+ S S+ +S++ + SK
Sbjct: 443 SDSNSDGYDSYDFDDKSMQGDDPNSSDESNGNDDANSESDNNSSSRGDASYNSDESKDNG 502
Query: 408 PSSSSSSSSSSSSSSPSSVNYSESN------STDSTKSQHHSSTSNQETSDS 453
S S + S S S N S+SN + D+ KS S+ SDS
Sbjct: 503 NGSDSKGAEDDDSDSTSDTNNSDSNGNGNNGNDDNDKSDSGKGKSDSSDSDS 554
Score = 30.0 bits (66), Expect = 6.6
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 12/86 (13%)
Query: 381 NTGADSPSCSNGVASTKSKQNHSKYPAPS--------SSSSSSSSSSSSSPSSVNYSES- 431
NTG+DS S K P S ++S S ++SSS +S N ES
Sbjct: 440 NTGSDSNSDGYDSYDFDDKSMQGDDPNSSDESNGNDDANSESDNNSSSRGDASYNSDESK 499
Query: 432 ---NSTDSTKSQHHSSTSNQETSDSE 454
N +DS ++ S S +T++S+
Sbjct: 500 DNGNGSDSKGAEDDDSDSTSDTNNSD 525
>gi|37588869 ring finger protein 123 [Homo sapiens]
Length = 1314
Score = 57.8 bits (138), Expect = 3e-08
Identities = 47/152 (30%), Positives = 72/152 (47%), Gaps = 14/152 (9%)
Query: 84 HKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPG-WDKH-SYG 141
H + ++R+T + G + +EV I S+G M IG N+ G D H SY
Sbjct: 118 HSNFGTIRSTTCVYK--GKWLYEVLISSQG---LMQIGWCTISCRFNQEEGVGDTHNSYA 172
Query: 142 YHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPANL- 200
Y G+ + + T YG + GD++ C ++L +GT + NG SLG AF +L L
Sbjct: 173 YDGNRVRKWNVTTTN--YGKAWAAGDIVSCLIDLDDGTLSFCLNGVSLGTAFENLSRGLG 230
Query: 201 ---YPTVGLQTPGEIVDANFGQQPFLFDIEDY 229
+P + L E V NFG +P + + Y
Sbjct: 231 MAYFPAISLSFK-ESVAFNFGSRPLRYPVAGY 261
>gi|169658378 trinucleotide repeat containing 18 [Homo sapiens]
Length = 2968
Score = 57.0 bits (136), Expect = 5e-08
Identities = 48/142 (33%), Positives = 64/142 (45%), Gaps = 16/142 (11%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTG---------------ADS 386
+G + S SS S S S S S S G + G A S
Sbjct: 2552 DGAEESESSSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAAS 2611
Query: 387 PSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTS 446
P+ S+ +S+ S + S + SSSSSSSSSSSSSS SS + S S+S+ S+ S SS+S
Sbjct: 2612 PASSSSSSSSSSSSSSSS-SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2670
Query: 447 NQETSDSEMEMEAEHYPNGVLG 468
+ DS + E P G
Sbjct: 2671 STTDEDSSCSSDDEAAPAPTAG 2692
Score = 44.3 bits (103), Expect = 3e-04
Identities = 38/117 (32%), Positives = 52/117 (44%), Gaps = 8/117 (6%)
Query: 343 GTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNH 402
G + S + SP S S S S S SSS S S S+ +S+ S +
Sbjct: 2599 GRNCSAASSRAASPASSSSSSSSSSSSSSSSSSSS--------SSSSSSSSSSSSSSSSS 2650
Query: 403 SKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEA 459
S + SSSSSSSSSSSSSS ++ S +S D + S Q ++ +A
Sbjct: 2651 SSSSSSSSSSSSSSSSSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQA 2707
Score = 41.6 bits (96), Expect = 0.002
Identities = 30/112 (26%), Positives = 49/112 (43%)
Query: 352 SSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSS 411
SSR+ S S S S SSS ++ + S S S+ +S+ S + S + SSS
Sbjct: 2606 SSRAASPASSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2665
Query: 412 SSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYP 463
SSSSSS++ S + E+ + ++ + T + + H P
Sbjct: 2666 SSSSSSTTDEDSSCSSDDEAAPAPTAGPSAQAALPTKATKQAGKARPSAHSP 2717
Score = 37.7 bits (86), Expect = 0.032
Identities = 42/183 (22%), Positives = 64/183 (34%), Gaps = 39/183 (21%)
Query: 350 SLSSRSPKSQDSYPGSP-------SLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNH 402
SL S P + S P +P L+ GP + + SP + +
Sbjct: 2500 SLGSYPPAAGSSEPKAPWPKATDGDLAQEPGPGLTFEDSGNPKSPDKAQAEQDGAEESES 2559
Query: 403 SKYPAPSSSSSSSSSSSS--------------------------------SSPSSVNYSE 430
S + SSSSSSSSSSS +SP+S + S
Sbjct: 2560 SSSSSSGSSSSSSSSSSSGSETEGEEEGDKNGDGGCGTGGRNCSAASSRAASPASSSSSS 2619
Query: 431 SNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPNGVLGSMSTRIVNGAYKHEDLQTDESS 490
S+S+ S+ S SS+S+ +S S + + S S+ + + D S
Sbjct: 2620 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTTDEDSSC 2679
Query: 491 MDD 493
D
Sbjct: 2680 SSD 2682
Score = 30.0 bits (66), Expect = 6.6
Identities = 27/99 (27%), Positives = 38/99 (38%), Gaps = 6/99 (6%)
Query: 354 RSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSS 413
+S S SYP + S P A P + + ++ K A +
Sbjct: 2496 KSLLSLGSYPPAAGSSEPKAPWPKATDGDLAQEPGPGLTFEDSGNPKSPDKAQAEQDGAE 2555
Query: 414 SSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSD 452
S SSSSSS S S+S+ S+ S S T +E D
Sbjct: 2556 ESESSSSSS------SGSSSSSSSSSSSGSETEGEEEGD 2588
>gi|95147342 chromodomain helicase DNA binding protein 9 [Homo
sapiens]
Length = 2881
Score = 53.9 bits (128), Expect = 4e-07
Identities = 43/125 (34%), Positives = 64/125 (51%), Gaps = 6/125 (4%)
Query: 333 KCRQFVEMVNG-TDSEVRSLSSRSPK--SQDSYPGSPSLSPRHGPSSSHMHNTGADSPSC 389
KC MV T+ + +S+ P+ + S S S S S S ++ + S SC
Sbjct: 2097 KCETDRRMVAARTEPLTPNPASKKPRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSC 2156
Query: 390 SNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQE 449
S+ + + S + S A SSSSSS+SSSSSSS SS SE + +D ++Q ST++ +
Sbjct: 2157 SHSRSGSSSSSSSSCSSASSSSSSSTSSSSSSSSSS---SEESDSDEEEAQKRESTTHMK 2213
Query: 450 TSDSE 454
D E
Sbjct: 2214 AYDEE 2218
Score = 53.9 bits (128), Expect = 4e-07
Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 363 PGSPSLSPR---HGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSS 419
P S PR G SS ++ ++ SCS+ +S+ S + S + SSSSSSSS SS
Sbjct: 2114 PNPASKKPRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSS 2173
Query: 420 SSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPNGVLGSMST 472
+SS SS + S S+S+ S+ S+ S + +E E + Y + S+ST
Sbjct: 2174 ASSSSSSSTSSSSSSSSSSSE-ESDSDEEEAQKRESTTHMKAYDEESVASLST 2225
Score = 52.0 bits (123), Expect = 2e-06
Identities = 34/90 (37%), Positives = 49/90 (54%), Gaps = 1/90 (1%)
Query: 368 LSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSS-SSPSSV 426
L+P +H G++S S S+ + S + S + SSS S S S SS SS SS
Sbjct: 2112 LTPNPASKKPRVHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSC 2171
Query: 427 NYSESNSTDSTKSQHHSSTSNQETSDSEME 456
+ + S+S+ ST S SS+S+ E SDS+ E
Sbjct: 2172 SSASSSSSSSTSSSSSSSSSSSEESDSDEE 2201
Score = 45.1 bits (105), Expect = 2e-04
Identities = 40/132 (30%), Positives = 54/132 (40%), Gaps = 3/132 (2%)
Query: 348 VRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPA 407
V S S DS S S R SSS + + S S S+ +S S + S
Sbjct: 2123 VHKRGSESSSDSDSDSERSSCSSRSSSSSSSSSCSHSRSGSSSSSSSSCSSASSSSSSST 2182
Query: 408 PSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPNGVL 467
SSSSSSSSSS S + ST K+ S ++ T+ E + ++ NG
Sbjct: 2183 SSSSSSSSSSSEESDSDEEEAQKRESTTHMKAYDEESVASLSTTQDETQ-DSFQMNNGT- 2240
Query: 468 GSMSTRIVNGAY 479
S I+ G Y
Sbjct: 2241 -PESAYILQGGY 2251
Score = 30.0 bits (66), Expect = 6.6
Identities = 38/175 (21%), Positives = 74/175 (42%), Gaps = 12/175 (6%)
Query: 340 MVNGTDSEVRSLSSRSPKSQDSY-PGSPSLSP-RHGPSSSHMHNTGADSPSCSNGVASTK 397
+ + + + S RS +++++ PG SLS ++ + S H + P ++++
Sbjct: 164 LFQANEQQTQCTSLRSQQNRNNLNPGQNSLSQSKNFMNVSGPHRVNVNHPPQMTNASNSQ 223
Query: 398 ---SKQNHSKYPAPSS-----SSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQE 449
S Q S+ PS+ SS + + SP+ + S SNS S H+S +SN
Sbjct: 224 QSISMQQFSQTSNPSAHFHKCSSHQEGNFNGPSPNMTSCSVSNSQQF--SSHYSFSSNHI 281
Query: 450 TSDSEMEMEAEHYPNGVLGSMSTRIVNGAYKHEDLQTDESSMDDRHPRRQLCGGN 504
+ +S ++ A N ++S + ++ ES+ +P L N
Sbjct: 282 SPNSLLQSSAVLASNHTNQTLSDFTGSNSFSPHRGIKQESTQHILNPNTSLNSNN 336
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 50.1 bits (118), Expect = 6e-06
Identities = 43/122 (35%), Positives = 56/122 (45%), Gaps = 15/122 (12%)
Query: 347 EVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSP--------SCSNGVASTKS 398
E RS SS S S S S S S SS + G+ P + + K
Sbjct: 2529 ERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKE 2588
Query: 399 KQNHSKYPAPS-------SSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETS 451
+ P P+ SSSSSSSSSSSSS SS + S S+S+ S+ S SS+S+ +S
Sbjct: 2589 AVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2648
Query: 452 DS 453
S
Sbjct: 2649 PS 2650
Score = 43.9 bits (102), Expect = 4e-04
Identities = 33/77 (42%), Positives = 41/77 (53%), Gaps = 9/77 (11%)
Query: 363 PGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSS 422
PG P P+S TGA PS + K +++ S + SSSSSSSSSSSSSS
Sbjct: 2499 PGVPHSDVGEPPAS-----TGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSS 2553
Query: 423 PSSVNYSESNSTDSTKS 439
S S S+S+DS S
Sbjct: 2554 SS----SGSSSSDSEGS 2566
Score = 41.2 bits (95), Expect = 0.003
Identities = 36/134 (26%), Positives = 58/134 (43%), Gaps = 3/134 (2%)
Query: 338 VEMVNGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTK 397
++ V T S RS S+ SP+ +D P +PS R G SS G+ +PS + S+
Sbjct: 1407 LDAVPRTPSRERSSSASSPEMKDGLPRTPSRRSRSG--SSPGLRDGSGTPSRHSLSGSSP 1464
Query: 398 SKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEM 457
++ + P+ S SS + P + S S S + + T +E S SE +
Sbjct: 1465 GMKDIPRTPSRGRSECDSSPEPKALPQTPR-PRSRSPSSPELNNKCLTPQRERSGSESSV 1523
Query: 458 EAEHYPNGVLGSMS 471
+ + LG S
Sbjct: 1524 DQKTVARTPLGQRS 1537
Score = 35.8 bits (81), Expect = 0.12
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 1/104 (0%)
Query: 359 QDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSS 418
++ P P+ + R SSS ++ + S S S+ +S+ S + S + SSSSSSSSS
Sbjct: 2591 REGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS-SSSSSSSSSSSSP 2649
Query: 419 SSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHY 462
S + P + S S S ++ DS + + Y
Sbjct: 2650 SPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSLSY 2693
Score = 33.9 bits (76), Expect = 0.46
Identities = 42/159 (26%), Positives = 64/159 (40%), Gaps = 47/159 (29%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHG----------PSSSHMHNTGADSPSCSN 391
+ +DSE SL + + P SP+ +P+ P+ ++ + S S S+
Sbjct: 2559 SSSDSEGSSLPVQPEVALKRVP-SPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSS 2617
Query: 392 GVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPS--------------------------- 424
+S+ S + S + SSSSSSSSSSSSSSPS
Sbjct: 2618 SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRS 2677
Query: 425 ------SVNYSESNSTDSTKSQHHS---STSNQETSDSE 454
S+ S S S + + S S +Q++S SE
Sbjct: 2678 PRKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSE 2716
Score = 32.7 bits (73), Expect = 1.0
Identities = 28/113 (24%), Positives = 50/113 (44%), Gaps = 11/113 (9%)
Query: 350 SLSSRSP--------KSQDSYPGSPSLSPRHG---PSSSHMHNTGADSPSCSNGVASTKS 398
S SSRSP K +D S S SPR S H + ++S + + KS
Sbjct: 177 SSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTPKS 236
Query: 399 KQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETS 451
K+ S S++ + S + S + ++S+D+++S+ S+ + T+
Sbjct: 237 KRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTT 289
Score = 32.7 bits (73), Expect = 1.0
Identities = 30/110 (27%), Positives = 45/110 (40%), Gaps = 19/110 (17%)
Query: 346 SEVRSLSSRSPKSQDSYPG----SPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
S R+ + RS +S+ P S S +PR G S S + + ++
Sbjct: 669 SRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSR---------------SLVRRGRS 713
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETS 451
HS+ P S SSS + S +S S SNS+ K SS ++ S
Sbjct: 714 HSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLS 763
Score = 31.6 bits (70), Expect = 2.3
Identities = 32/111 (28%), Positives = 42/111 (37%), Gaps = 9/111 (8%)
Query: 353 SRSPKSQDSYPGSPS-------LSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKY 405
+R+P Q S GS LSPR S S D P + S K
Sbjct: 1569 TRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVK--DKPRAAPRAQSGSDSSPEPKA 1626
Query: 406 PAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEME 456
PAP + S S SSS + S+ST+S+ S + + S S E
Sbjct: 1627 PAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPE 1677
Score = 30.4 bits (67), Expect = 5.1
Identities = 39/144 (27%), Positives = 56/144 (38%), Gaps = 28/144 (19%)
Query: 353 SRSP----KSQDSY----PGSPSL-----------SPRHGPSSSHMHNTGADSPSCSNGV 393
S+SP KS+DS PGS SL G SS + SP +
Sbjct: 1012 SKSPCPQEKSKDSLVQSCPGSLSLCAGVKSSTPPGESYFGVSSLQLKGQSQTSPDHRSDT 1071
Query: 394 ASTKSKQNHSKYPA-PSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSST----SNQ 448
+S + +Q+HS+ P+ S S +S S S S V S S S++ S
Sbjct: 1072 SSPEVRQSHSESPSLQSKSQTSPKGGRSRSSSPVTELASRSPIRQDRGEFSASPMLKSGM 1131
Query: 449 ETSDSEMEMEAEHYP----NGVLG 468
S + ++ YP N +LG
Sbjct: 1132 SPEQSRFQSDSSSYPTVDSNSLLG 1155
Score = 30.4 bits (67), Expect = 5.1
Identities = 33/128 (25%), Positives = 53/128 (41%), Gaps = 4/128 (3%)
Query: 353 SRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCS--NGVASTKSKQNHSKYPAPSS 410
S SP ++S+ GSP GP + M NTG S NG + + + S S
Sbjct: 1318 SNSPLRENSF-GSPLEFRNSGPLGTEM-NTGFSSEVKEDLNGPFLNQLETDPSLDMKEQS 1375
Query: 411 SSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPNGVLGSM 470
+ SS SSS SP +V + +S S S + + + + +G+ +
Sbjct: 1376 TRSSGHSSSELSPDAVEKAGMSSNQSISSPVLDAVPRTPSRERSSSASSPEMKDGLPRTP 1435
Query: 471 STRIVNGA 478
S R +G+
Sbjct: 1436 SRRSRSGS 1443
Score = 30.0 bits (66), Expect = 6.6
Identities = 30/126 (23%), Positives = 49/126 (38%), Gaps = 16/126 (12%)
Query: 344 TDSEVRSLSSRSP------KSQDSYPGSPSLSPRHGPSSSHMH-NTGADSPSCSN----- 391
++SE + RSP KS+D S S P S H +T ADS S S+
Sbjct: 220 SESESKKRKHRSPTPKSKRKSKDK-KRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSR 278
Query: 392 ---GVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQ 448
A T + + P+P+S + S P + + +S ++ Q S ++
Sbjct: 279 SRSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPSSPETATKQPSSPYEDK 338
Query: 449 ETSDSE 454
+ E
Sbjct: 339 DKDKKE 344
Score = 30.0 bits (66), Expect = 6.6
Identities = 24/89 (26%), Positives = 39/89 (43%), Gaps = 9/89 (10%)
Query: 367 SLSPRHGPSSSHMHNTGADSPSCSNGVASTKS----KQNHSKYPAPSSSSSSS-----SS 417
S +P PS S M + A SPS G A ++S Q+ + P PS+ S S +
Sbjct: 2407 SRTPPSAPSQSRMTSERAPSPSSRMGQAPSQSLLPPAQDQPRSPVPSAFSDQSRCLIAQT 2466
Query: 418 SSSSSPSSVNYSESNSTDSTKSQHHSSTS 446
+ + S++ +T S+ H+ S
Sbjct: 2467 TPVAGSQSLSSGAVATTTSSAGDHNGMLS 2495
Score = 29.6 bits (65), Expect = 8.6
Identities = 29/113 (25%), Positives = 47/113 (41%), Gaps = 4/113 (3%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLS--PRHGPSSSHMHNTGADSPSCSNGVASTKSK 399
+G+ EV S S SP+ S SP + PR P + ++ + + + +S+
Sbjct: 1579 SGSSPEVDSKSRLSPRRSRS-GSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSR 1637
Query: 400 Q-NHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETS 451
+ SK PS SSS+ SS P + S S + + S T + S
Sbjct: 1638 SGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRS 1690
>gi|161016767 mucin 21 [Homo sapiens]
Length = 566
Score = 49.7 bits (117), Expect = 8e-06
Identities = 34/110 (30%), Positives = 58/110 (52%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
N S S +S + S+ S P S + + + SS+ G + S S+ V+S S
Sbjct: 227 NSESSTTSSGASTATNSESSTPSSGAGTATNSESSTTSSGAGTATNSESSTVSSGISTVT 286
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETS 451
+S+ PSS ++++++S SS+ SS + +NS ST S S+ +N E+S
Sbjct: 287 NSESSTPSSGANTATNSESSTTSSGANTATNSDSSTTSSGASTATNSESS 336
Score = 46.6 bits (109), Expect = 7e-05
Identities = 32/110 (29%), Positives = 56/110 (50%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
N S V S +S + S+ S S + + + S + + G + S S+ +S S
Sbjct: 182 NSESSTVSSRASTATNSESSTTSSGASTATNSESRTTSNGAGTATNSESSTTSSGASTAT 241
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETS 451
+S+ PSS + ++++S SS+ SS + +NS ST S S+ +N E+S
Sbjct: 242 NSESSTPSSGAGTATNSESSTTSSGAGTATNSESSTVSSGISTVTNSESS 291
Score = 45.8 bits (107), Expect = 1e-04
Identities = 35/116 (30%), Positives = 62/116 (53%), Gaps = 8/116 (6%)
Query: 336 QFVEMVNGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVAS 395
+F + +G S SS + + S S +P G S++ T +DS + S+G AS
Sbjct: 94 EFSTVSSGISIATNSESSTTSSGASTATNSESSTPSSGASTA----TNSDSSTTSSG-AS 148
Query: 396 TKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETS 451
T + + S + +S++++S SS++SS +S + +NS ST S S+ +N E+S
Sbjct: 149 TATNSDSSTTSSEASTATNSESSTTSSGAS---TATNSESSTVSSRASTATNSESS 201
Score = 44.7 bits (104), Expect = 3e-04
Identities = 31/109 (28%), Positives = 54/109 (49%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
N S S +S + S+ S P S + + + SS+ + S S+ +S S
Sbjct: 107 NSESSTTSSGASTATNSESSTPSSGASTATNSDSSTTSSGASTATNSDSSTTSSEASTAT 166
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQET 450
+S+ SS +S++++S SS+ SS + +NS ST S S+ +N E+
Sbjct: 167 NSESSTTSSGASTATNSESSTVSSRASTATNSESSTTSSGASTATNSES 215
Score = 44.7 bits (104), Expect = 3e-04
Identities = 33/110 (30%), Positives = 54/110 (49%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
N S V S S S+ S P S + + + SS+ + S S+ +S S
Sbjct: 272 NSESSTVSSGISTVTNSESSTPSSGANTATNSESSTTSSGANTATNSDSSTTSSGASTAT 331
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETS 451
+S+ SS +S++++S SS+ SS + +NS ST S S+ +N E+S
Sbjct: 332 NSESSTTSSGASTATNSESSTTSSGASTATNSGSSTTSSGTSTATNSESS 381
Score = 42.7 bits (99), Expect = 0.001
Identities = 32/108 (29%), Positives = 60/108 (55%), Gaps = 12/108 (11%)
Query: 344 TDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHS 403
T+SE ++SSR+ + +S + S G S++ T ++S + SNG + + ++ +
Sbjct: 181 TNSESSTVSSRASTATNSESSTTS----SGASTA----TNSESRTTSNGAGTATNSESST 232
Query: 404 KYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETS 451
SS +S++++S SS+PSS + +NS ST S + +N E+S
Sbjct: 233 T----SSGASTATNSESSTPSSGAGTATNSESSTTSSGAGTATNSESS 276
Score = 42.4 bits (98), Expect = 0.001
Identities = 31/110 (28%), Positives = 54/110 (49%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
N S S +S + S+ S S + + + SS+ + S S+ +S S
Sbjct: 317 NSDSSTTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNSGSSTTSSGTSTAT 376
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETS 451
+S+ SS +S++++S SS+ SS + +NS ST S S+ +N E+S
Sbjct: 377 NSESSTVSSGASTATTSESSTTSSGASTATNSESSTVSSGASTATNSESS 426
Score = 41.6 bits (96), Expect = 0.002
Identities = 26/86 (30%), Positives = 46/86 (53%), Gaps = 4/86 (4%)
Query: 375 SSSHMHNTGADSPSCSNGVASTKSK----QNHSKYPAPSSSSSSSSSSSSSSPSSVNYSE 430
++S H T + + +N ST S +S+ SS +S++++S SS+PSS +
Sbjct: 76 TNSEFHTTSSGISTATNSEFSTVSSGISIATNSESSTTSSGASTATNSESSTPSSGASTA 135
Query: 431 SNSTDSTKSQHHSSTSNQETSDSEME 456
+NS ST S S+ +N ++S + E
Sbjct: 136 TNSDSSTTSSGASTATNSDSSTTSSE 161
Score = 40.8 bits (94), Expect = 0.004
Identities = 30/110 (27%), Positives = 53/110 (48%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
N S S +S + S S S + + + SS+ + S S+ V+S S
Sbjct: 137 NSDSSTTSSGASTATNSDSSTTSSEASTATNSESSTTSSGASTATNSESSTVSSRASTAT 196
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETS 451
+S+ SS +S++++S S + S+ + +NS ST S S+ +N E+S
Sbjct: 197 NSESSTTSSGASTATNSESRTTSNGAGTATNSESSTTSSGASTATNSESS 246
Score = 40.8 bits (94), Expect = 0.004
Identities = 30/113 (26%), Positives = 57/113 (50%), Gaps = 7/113 (6%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
+G + S SS + S S +P G +++ T ++S + S+G + + +
Sbjct: 265 SGAGTATNSESSTVSSGISTVTNSESSTPSSGANTA----TNSESSTTSSGANTATNSDS 320
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTD---STKSQHHSSTSNQETS 451
+ S++++S SS++SS S+ SES++T ST + SST++ TS
Sbjct: 321 STTSSGASTATNSESSTTSSGASTATNSESSTTSSGASTATNSGSSTTSSGTS 373
Score = 40.0 bits (92), Expect = 0.006
Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 4/119 (3%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
+G ++ S SS + + S S + G S++ T ++S + S+G ++ + +
Sbjct: 310 SGANTATNSDSSTTSSGASTATNSESSTTSSGASTA----TNSESSTTSSGASTATNSGS 365
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAE 460
+ S++++S SS+ SS S+ SES++T S S +S S+ +S + +E
Sbjct: 366 STTSSGTSTATNSESSTVSSGASTATTSESSTTSSGASTATNSESSTVSSGASTATNSE 424
Score = 38.5 bits (88), Expect = 0.019
Identities = 27/112 (24%), Positives = 57/112 (50%), Gaps = 4/112 (3%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
+G + S SS + + S S + G S++ T ++S + S+G ++ + ++
Sbjct: 340 SGASTATNSESSTTSSGASTATNSGSSTTSSGTSTA----TNSESSTVSSGASTATTSES 395
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDS 453
+ S++++S SS+ SS S+ SES++T S + +S S+ ++ S
Sbjct: 396 STTSSGASTATNSESSTVSSGASTATNSESSTTSSGANTATNSGSSVTSAGS 447
Score = 38.1 bits (87), Expect = 0.024
Identities = 28/110 (25%), Positives = 52/110 (47%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQN 401
N S S +S + S+ S S + + + SS+ + S S+ +S S
Sbjct: 152 NSDSSTTSSEASTATNSESSTTSSGASTATNSESSTVSSRASTATNSESSTTSSGASTAT 211
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETS 451
+S+ S+ + ++++S SS+ SS + +NS ST S + +N E+S
Sbjct: 212 NSESRTTSNGAGTATNSESSTTSSGASTATNSESSTPSSGAGTATNSESS 261
Score = 37.0 bits (84), Expect = 0.054
Identities = 23/86 (26%), Positives = 46/86 (53%)
Query: 375 SSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNST 434
SS T ++S + S+G ++ + + + S++++S SS++SS S+ SES++T
Sbjct: 114 SSGASTATNSESSTPSSGASTATNSDSSTTSSGASTATNSDSSTTSSEASTATNSESSTT 173
Query: 435 DSTKSQHHSSTSNQETSDSEMEMEAE 460
S S +S S+ +S + +E
Sbjct: 174 SSGASTATNSESSTVSSRASTATNSE 199
Score = 35.0 bits (79), Expect = 0.21
Identities = 26/108 (24%), Positives = 53/108 (49%), Gaps = 4/108 (3%)
Query: 344 TDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHS 403
T S + ++ ++ + G+ + S SS T ++S + S+G + + ++ +
Sbjct: 203 TSSGASTATNSESRTTSNGAGTATNSESSTTSSGASTATNSESSTPSSGAGTATNSESST 262
Query: 404 KYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETS 451
++++S SS+ SS S+V SES ST S ++ +N E+S
Sbjct: 263 TSSGAGTATNSESSTVSSGISTVTNSES----STPSSGANTATNSESS 306
Score = 34.3 bits (77), Expect = 0.35
Identities = 31/109 (28%), Positives = 53/109 (48%), Gaps = 1/109 (0%)
Query: 344 TDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHN-TGADSPSCSNGVASTKSKQNH 402
T+S S S+ + S S S + + +SS + T + S SNGV+ + + H
Sbjct: 22 TNSNETSTSANTGSSVISSGASTATNSGSSVTSSGVSTATISGSSVTSNGVSIVTNSEFH 81
Query: 403 SKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETS 451
+ S++++S S+ SS S SES++T S S +S S+ +S
Sbjct: 82 TTSSGISTATNSEFSTVSSGISIATNSESSTTSSGASTATNSESSTPSS 130
>gi|167234419 thyroid hormone receptor associated protein 3 [Homo
sapiens]
Length = 955
Score = 48.9 bits (115), Expect = 1e-05
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 6/123 (4%)
Query: 349 RSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAP 408
++ S R +S+ P S SPR S SH N+ S S +S++S NHS+ +
Sbjct: 116 QAYSPRRGRSRSRSPKRRSPSPR---SRSHSRNSDKSSSDRSRRSSSSRSSSNHSRVESS 172
Query: 409 SSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPNGVLG 468
S+ SSS + N D K Q S ++Q+T SE ++ +P+ G
Sbjct: 173 KRKSAKEKKSSSKDSRPSQAAGDNQGDEAKEQTFSGGTSQDTKASE---SSKPWPDATYG 229
Query: 469 SMS 471
+ S
Sbjct: 230 TGS 232
Score = 33.5 bits (75), Expect = 0.60
Identities = 39/170 (22%), Positives = 61/170 (35%), Gaps = 26/170 (15%)
Query: 346 SEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHM----------HNTGADSPSC------ 389
S RSLS + S S S SP H +H HN G P
Sbjct: 32 SRSRSLSRSRKRRLSSRSRSRSYSPAHNRERNHPRVYQNRDFRGHNRGYRRPYYFRGRNR 91
Query: 390 ---------SNGVASTKSK-QNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKS 439
G + +S QN+ + +P S S S SPS + S S ++D + S
Sbjct: 92 GFYPWGQYNRGGYGNYRSNWQNYRQAYSPRRGRSRSRSPKRRSPSPRSRSHSRNSDKSSS 151
Query: 440 QHHSSTSNQETSDSEMEMEAEHYPNGVLGSMSTRIVNGAYKHEDLQTDES 489
+S+ +S + +E+ + S++ + D Q DE+
Sbjct: 152 DRSRRSSSSRSSSNHSRVESSKRKSAKEKKSSSKDSRPSQAAGDNQGDEA 201
>gi|4826686 DEAD (Asp-Glu-Ala-Asp) box polypeptide 1 [Homo sapiens]
Length = 740
Score = 48.5 bits (114), Expect = 2e-05
Identities = 39/133 (29%), Positives = 63/133 (47%), Gaps = 15/133 (11%)
Query: 101 GIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYG 160
G +Y+EV +G +G S +++ G DK +G+ G S YG
Sbjct: 131 GKHYYEVSCHDQG---LCRVGWSTMQASLDL--GTDKFGFGFGGTGKKSHNKQFDN--YG 183
Query: 161 PTFTTGDVIGCCVNLINGTCFYTKNGHSLGIAFTDLPAN-----LYPTVGLQTPGEIVDA 215
FT D IGC +++ G ++KNG LG+AF ++P + L+P L+ +
Sbjct: 184 EEFTMHDTIGCYLDIDKGHVKFSKNGKDLGLAF-EIPPHMKNQALFPACVLKNAE--LKF 240
Query: 216 NFGQQPFLFDIED 228
NFG++ F F +D
Sbjct: 241 NFGEEEFKFPPKD 253
>gi|21361272 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 1 [Homo sapiens]
Length = 559
Score = 48.5 bits (114), Expect = 2e-05
Identities = 51/182 (28%), Positives = 70/182 (38%), Gaps = 47/182 (25%)
Query: 351 LSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSS 410
L S SPK G P P P +S ADSP S S + P S
Sbjct: 263 LESTSPK------GGPPPPPPPPPRASSKRPATADSPKPSAKKQKKSSSKGSRSAPGTSP 316
Query: 411 SSSSSSSSSSSSPS----------------------SVNYSESNSTD--------STKSQ 440
+SSSSS S P+ ++ ESNS D + S
Sbjct: 317 RTSSSSSFSDKKPAKDKSSTRGEKVKAESEPREAKKALEVEESNSEDEASFKSESAQSSP 376
Query: 441 HHSSTSNQETSDSEMEMEAEHYPNGVLGSMSTRIVNGAYKHEDLQTDESSMDDRHPRRQL 500
+SS+S+ +SDS+ E ++++ G L SM EDLQ++ES DD +
Sbjct: 377 SNSSSSSDSSSDSDFE-PSQNHSQGPLRSMV----------EDLQSEESDEDDSSSGEEA 425
Query: 501 CG 502
G
Sbjct: 426 AG 427
>gi|33356174 pinin, desmosome associated protein [Homo sapiens]
Length = 717
Score = 48.5 bits (114), Expect = 2e-05
Identities = 30/78 (38%), Positives = 42/78 (53%)
Query: 388 SCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSN 447
S S G A K+ ++ S+ + SSSSSSS+SSSS S SS S S S+ S+ S S+S
Sbjct: 560 SRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSR 619
Query: 448 QETSDSEMEMEAEHYPNG 465
+S + E+ G
Sbjct: 620 DSSSSTSSSSESRSRSRG 637
Score = 45.4 bits (106), Expect = 2e-04
Identities = 35/100 (35%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 362 YPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSS 421
+P S S + S N + S S S+ +S+ S S + SSS SSSS SSSS
Sbjct: 549 HPESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSS 608
Query: 422 SPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEH 461
S SS S S+S DS+ S SS S + + +H
Sbjct: 609 SSSST--SGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKH 646
Score = 42.4 bits (98), Expect = 0.001
Identities = 31/116 (26%), Positives = 53/116 (45%)
Query: 338 VEMVNGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTK 397
VE V E +S + +S+ S S SSS ++ S S S+ + +
Sbjct: 542 VEPVLTVHPESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSS 601
Query: 398 SKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDS 453
S ++ S + +S SSS SSSS+S SS + S S + + H + +++ D+
Sbjct: 602 SSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRDRKHRRSVDRKRRDT 657
Score = 41.2 bits (95), Expect = 0.003
Identities = 31/112 (27%), Positives = 53/112 (47%)
Query: 338 VEMVNGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTK 397
VE V T+ V + + P+S+ R +S + + S S S+ S+
Sbjct: 532 VESVKLTEVPVEPVLTVHPESKSKTKTRSRSRGRARNKTSKSRSRSSSSSSSSSSSTSSS 591
Query: 398 SKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQE 449
S + S + S SSSSSSSS+S S S + S ++S+ ++S+ N++
Sbjct: 592 SGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTSSSSESRSRSRGRGHNRD 643
>gi|156104889 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 3 [Homo sapiens]
Length = 568
Score = 48.1 bits (113), Expect = 2e-05
Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 3/92 (3%)
Query: 401 NHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAE 460
N S + + SSSSSSSSSSSSSS SS + S S+S+ S+ S SS+S+ + ++ E
Sbjct: 143 NRSIHTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKE 202
Query: 461 HYPNGVLGSMSTRIVNGAYKHEDLQTDESSMD 492
H S +R A+K ++SS +
Sbjct: 203 HKEK---PSKDSREHKSAFKEPSRDHNKSSKE 231
Score = 44.3 bits (103), Expect = 3e-04
Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 9/87 (10%)
Query: 373 GPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYS--- 429
G + +H + + S S S+ +S+ S + S + SSSSSSSSSSSSSS SS ++S
Sbjct: 140 GDPNRSIHTSSSSSSSSSSSSSSSSSSSSSSS--SSSSSSSSSSSSSSSSSSSTSFSKPH 197
Query: 430 ----ESNSTDSTKSQHHSSTSNQETSD 452
E S S+ H S + + D
Sbjct: 198 KLMKEHKEKPSKDSREHKSAFKEPSRD 224
Score = 43.5 bits (101), Expect = 6e-04
Identities = 28/72 (38%), Positives = 41/72 (56%)
Query: 387 PSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTS 446
P+ S +S+ S + S + SSSSSSSSSSSSSS SS + S S+S+ ++ S+ H
Sbjct: 142 PNRSIHTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMK 201
Query: 447 NQETSDSEMEME 458
+ S+ E
Sbjct: 202 EHKEKPSKDSRE 213
Score = 42.4 bits (98), Expect = 0.001
Identities = 31/84 (36%), Positives = 43/84 (51%), Gaps = 2/84 (2%)
Query: 383 GADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHH 442
G D + +S+ S + S + SSSSSSSSSSSSSS SS + S S+S+ S H
Sbjct: 139 GGDPNRSIHTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHK 198
Query: 443 SSTSNQE--TSDSEMEMEAEHYPN 464
++E + DS A P+
Sbjct: 199 LMKEHKEKPSKDSREHKSAFKEPS 222
Score = 32.3 bits (72), Expect = 1.3
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 4/78 (5%)
Query: 398 SKQNHSKYPAP-SSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEME 456
S ++ S+ P+P SSSSSSSSS + S S D + + E +D++ E
Sbjct: 371 SSKSDSEQPSPASSSSSSSSSFTPSQTRQQGPLRSIMKDLHSDDNEEESDEVEDNDNDSE 430
Query: 457 MEAEHYPNGVLGSMSTRI 474
ME P GS S R+
Sbjct: 431 MER---PVNRGGSRSRRV 445
Score = 32.0 bits (71), Expect = 1.7
Identities = 25/103 (24%), Positives = 43/103 (41%), Gaps = 2/103 (1%)
Query: 349 RSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHS--KYP 406
RS+ + S S S S S S SSS ++ + S S S+ +ST + H K
Sbjct: 144 RSIHTSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSTSFSKPHKLMKEH 203
Query: 407 APSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQE 449
S S S+ S ++++S+ S K + + ++
Sbjct: 204 KEKPSKDSREHKSAFKEPSRDHNKSSKESSKKPKENKPLKEEK 246
Score = 31.6 bits (70), Expect = 2.3
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 17/157 (10%)
Query: 287 EEQASIKNRQKIQKLVLEGRVGEAIETTQRFYPGLLEHNPNLLFMLKCRQFVEMVNG-TD 345
++Q K+ K+ K+ +E E ++T + +++ N + E ++ +D
Sbjct: 324 KKQIKDKSHVKMGKVKIESETSEKKKSTLPPFDDIVDPNDS--------DVEENISSKSD 375
Query: 346 SEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKY 405
SE S +S S S S+ +PS + + GP S M + +D + + N S+
Sbjct: 376 SEQPSPASSSSSSSSSF--TPSQTRQQGPLRSIMKDLHSDDNEEESD--EVEDNDNDSEM 431
Query: 406 PAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHH 442
P + S S S S S+S S+ ++ HH
Sbjct: 432 ERPVNRGGSRSRRVSLSDG----SDSESSSASSPLHH 464
>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
Length = 1142
Score = 47.0 bits (110), Expect = 5e-05
Identities = 47/155 (30%), Positives = 65/155 (41%), Gaps = 14/155 (9%)
Query: 350 SLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGA-------DSP-SCSNGVASTKSKQN 401
SL P+S S P P+ SP P SS T A +SP S G A + +
Sbjct: 754 SLPQSFPESPQSPPEGPAQSPLQRPVSSFFSYTLASLLQSSHESPQSPPEGPAQSPLQSP 813
Query: 402 HSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEH 461
S +P+ +SSS S SS SS PSS + S S S+ + Q + + TS S E+
Sbjct: 814 VSSFPSSTSSSLSQSSPVSSFPSSTSSSLSKSSPESPLQSPVISFSSSTSLSPFSEESSS 873
Query: 462 YPNGVLGSMSTRIVNGAYKHEDLQTDESSMDDRHP 496
+ S T + D TD S+ + P
Sbjct: 874 PVDEYTSSSDTLL------ESDSLTDSESLIESEP 902
Score = 31.2 bits (69), Expect = 3.0
Identities = 35/126 (27%), Positives = 47/126 (37%), Gaps = 16/126 (12%)
Query: 339 EMVNGTDSEVRSLSSRSPKS-QDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTK 397
E + S V SS +P S S+P S S SP GP S +H+ +
Sbjct: 620 EFQSSLQSPVSICSSSTPSSLPQSFPES-SQSPPEGPVQSPLHS------------PQSP 666
Query: 398 SKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEM 457
+ HS+ P S S+ S SP + S DS S H S E DS +
Sbjct: 667 PEGMHSQSPL-QSPESAPEGEDSLSPLQIPQSPLEGEDSLSSLHFPQ-SPPEWEDSLSPL 724
Query: 458 EAEHYP 463
+P
Sbjct: 725 HFPQFP 730
>gi|8923106 zinc finger, CCHC domain containing 10 [Homo sapiens]
Length = 170
Score = 46.6 bits (109), Expect = 7e-05
Identities = 33/80 (41%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 375 SSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNST 434
SSS ++ A S + ST S S SSSSSSS+SS++SS SS + S+S+S+
Sbjct: 89 SSSSSSDSSASDSSSESEETSTSSSSEDSDTDESSSSSSSSASSTTSSSSSDSDSDSSSS 148
Query: 435 DSTKSQHHSSTSNQETSDSE 454
S SSTS +SD E
Sbjct: 149 SS------SSTSTDSSSDDE 162
Score = 43.5 bits (101), Expect = 6e-04
Identities = 30/103 (29%), Positives = 50/103 (48%), Gaps = 12/103 (11%)
Query: 397 KSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEME 456
K+K+ SK SSSSSS SS+S SS S S S+S++ + + SS+S+ S +
Sbjct: 77 KAKKKRSKSVTSSSSSSSDSSASDSSSESEETSTSSSSEDSDTDESSSSSSSSASSTTSS 136
Query: 457 MEAEHYPNGVLGSMSTRIVNGAYKHEDLQTDESSMDDRHPRRQ 499
++ + S S+ + +SS DD P+++
Sbjct: 137 SSSDSDSDSSSSSSSS------------TSTDSSSDDEPPKKK 167
Score = 42.7 bits (99), Expect = 0.001
Identities = 25/75 (33%), Positives = 41/75 (54%)
Query: 384 ADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHS 443
+ S S S+ AS S ++ + SS S + SSSSS SS + + S+S+ + S S
Sbjct: 88 SSSSSSSDSSASDSSSESEETSTSSSSEDSDTDESSSSSSSSASSTTSSSSSDSDSDSSS 147
Query: 444 STSNQETSDSEMEME 458
S+S+ ++DS + E
Sbjct: 148 SSSSSTSTDSSSDDE 162
Score = 39.7 bits (91), Expect = 0.008
Identities = 23/75 (30%), Positives = 40/75 (53%)
Query: 386 SPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSST 445
S S S+ +S + S+ + SSSS S + SSS SS + S + S+ S+ S SS+
Sbjct: 88 SSSSSSSDSSASDSSSESEETSTSSSSEDSDTDESSSSSSSSASSTTSSSSSDSDSDSSS 147
Query: 446 SNQETSDSEMEMEAE 460
S+ ++ ++ + E
Sbjct: 148 SSSSSTSTDSSSDDE 162
Score = 39.3 bits (90), Expect = 0.011
Identities = 29/102 (28%), Positives = 43/102 (42%)
Query: 339 EMVNGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKS 398
+ + T+ E ++ RS S S S S S +T + S +S+ S
Sbjct: 67 QSIGETNVERKAKKKRSKSVTSSSSSSSDSSASDSSSESEETSTSSSSEDSDTDESSSSS 126
Query: 399 KQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQ 440
+ S + SSS S S SSSSSS S+ S S+ K +
Sbjct: 127 SSSASSTTSSSSSDSDSDSSSSSSSSTSTDSSSDDEPPKKKK 168
>gi|8923557 chromosome 20 open reading frame 11 [Homo sapiens]
Length = 228
Score = 46.6 bits (109), Expect = 7e-05
Identities = 24/94 (25%), Positives = 50/94 (53%)
Query: 254 QAVLQNMVSSYLVHHGYCATATAFARMTETPIQEEQASIKNRQKIQKLVLEGRVGEAIET 313
+A + ++ +YLV G+ A F + + ++ R KI++++L+G++ EAI
Sbjct: 26 RADMNRLIMNYLVTEGFKEAAEKFRMESGIEPSVDLETLDERIKIREMILKGQIQEAIAL 85
Query: 314 TQRFYPGLLEHNPNLLFMLKCRQFVEMVNGTDSE 347
+P LL+ N L F L+ + +E++ ++E
Sbjct: 86 INSLHPELLDTNRYLYFHLQQQHLIELIRQRETE 119
Score = 35.8 bits (81), Expect = 0.12
Identities = 26/84 (30%), Positives = 39/84 (46%), Gaps = 6/84 (7%)
Query: 505 QAATERIILFGRELQALSEQLGREYGKNLAHTEMLQDAFSLLAYSDPWSCPVGQQLDPIQ 564
Q TE + F + A + RE TEM + +LLA+ P P G L +Q
Sbjct: 115 QRETEAALEFAQTQLAEQGEESRE-----CLTEM-ERTLALLAFDSPEESPFGDLLHTMQ 168
Query: 565 REPVCAALNSAILESQNLPKQPPL 588
R+ V + +N A+L+ +N P L
Sbjct: 169 RQKVWSEVNQAVLDYENRESTPKL 192
>gi|126032338 ryanodine receptor 3 [Homo sapiens]
Length = 4870
Score = 46.2 bits (108), Expect = 9e-05
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 5/89 (5%)
Query: 101 GIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYG 160
G +YFE ++V+ G M +G + G + G D ++ + G+ G + G+G +G
Sbjct: 1085 GKWYFEFEVVTGGD---MRVGWARPGCRPDVELGADDQAFVFEGNRGQRW-HQGSGY-FG 1139
Query: 161 PTFTTGDVIGCCVNLINGTCFYTKNGHSL 189
T+ GDV+GC +NL + + +T NG L
Sbjct: 1140 RTWQPGDVVGCMINLDDASMIFTLNGELL 1168
>gi|113204617 skeletal muscle ryanodine receptor isoform 2 [Homo
sapiens]
Length = 5033
Score = 45.4 bits (106), Expect = 2e-04
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 14/137 (10%)
Query: 91 RATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSF 150
RA G +YFE + V+ G M +G + + + G D+ +Y ++G G +
Sbjct: 1075 RAEKSYTVQSGRWYFEFEAVTTGE---MRVGWARPELRPDVELGADELAYVFNGHRGQRW 1131
Query: 151 CSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSL------GIAFTDLPA--NLYP 202
+P+G + GDV+GC ++L T +T NG L AF ++ P
Sbjct: 1132 HLGS--EPFGRPWQPGDVVGCMIDLTENTIIFTLNGEVLMSDSGSETAFREIEIGDGFLP 1189
Query: 203 TVGLQTPGEIVDANFGQ 219
L PG++ N GQ
Sbjct: 1190 VCSL-GPGQVGHLNLGQ 1205
>gi|113204615 skeletal muscle ryanodine receptor isoform 1 [Homo
sapiens]
Length = 5038
Score = 45.4 bits (106), Expect = 2e-04
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 14/137 (10%)
Query: 91 RATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSF 150
RA G +YFE + V+ G M +G + + + G D+ +Y ++G G +
Sbjct: 1075 RAEKSYTVQSGRWYFEFEAVTTGE---MRVGWARPELRPDVELGADELAYVFNGHRGQRW 1131
Query: 151 CSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSL------GIAFTDLPA--NLYP 202
+P+G + GDV+GC ++L T +T NG L AF ++ P
Sbjct: 1132 HLGS--EPFGRPWQPGDVVGCMIDLTENTIIFTLNGEVLMSDSGSETAFREIEIGDGFLP 1189
Query: 203 TVGLQTPGEIVDANFGQ 219
L PG++ N GQ
Sbjct: 1190 VCSL-GPGQVGHLNLGQ 1205
>gi|157412282 ash2-like isoform b [Homo sapiens]
Length = 534
Score = 44.7 bits (104), Expect = 3e-04
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 25/176 (14%)
Query: 4 ATADPGAGNPQPGDSSGGGAGGGLPSPGEQELSRRLQRLYPAVNQQETPLPRSWSPKDKY 63
A DP A +P+ + G P PG+ + +R+ A++ + L S D+
Sbjct: 252 AEPDPHAPDPEKLELD---CWAGKPIPGDLYRACLYERVLLALHDRAPQLKIS---DDRL 305
Query: 64 NYIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLS 123
+G K + VRA+H + G +YFE+ + D +G S
Sbjct: 306 TVVG----------------EKGYSMVRASHGVRK--GAWYFEITVDEMPPDTAARLGWS 347
Query: 124 AQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGT 179
N+ G+DK SY + G F S G+ Y + GDV+G +NL T
Sbjct: 348 QPLGNLQAPLGYDKFSYSWRSKKGTKFHQS-IGKHYSSGYGQGDVLGFYINLPEDT 402
>gi|157412280 ash2-like isoform a [Homo sapiens]
Length = 628
Score = 44.7 bits (104), Expect = 3e-04
Identities = 45/176 (25%), Positives = 71/176 (40%), Gaps = 25/176 (14%)
Query: 4 ATADPGAGNPQPGDSSGGGAGGGLPSPGEQELSRRLQRLYPAVNQQETPLPRSWSPKDKY 63
A DP A +P+ + G P PG+ + +R+ A++ + L S D+
Sbjct: 346 AEPDPHAPDPEKLELD---CWAGKPIPGDLYRACLYERVLLALHDRAPQLKIS---DDRL 399
Query: 64 NYIGLSQGNLRVHYKGHGKNHKDAASVRATHPIPAACGIYYFEVKIVSKGRDGYMGIGLS 123
+G K + VRA+H + G +YFE+ + D +G S
Sbjct: 400 TVVG----------------EKGYSMVRASHGVRK--GAWYFEITVDEMPPDTAARLGWS 441
Query: 124 AQGVNMNRLPGWDKHSYGYHGDDGHSFCSSGTGQPYGPTFTTGDVIGCCVNLINGT 179
N+ G+DK SY + G F S G+ Y + GDV+G +NL T
Sbjct: 442 QPLGNLQAPLGYDKFSYSWRSKKGTKFHQS-IGKHYSSGYGQGDVLGFYINLPEDT 496
>gi|58219064 Src homology 2 domain containing E [Homo sapiens]
Length = 495
Score = 44.7 bits (104), Expect = 3e-04
Identities = 31/79 (39%), Positives = 39/79 (49%), Gaps = 10/79 (12%)
Query: 358 SQDSYPGSPSLSPRHGPSSSHM-----HNTGADSPSCSNGV-----ASTKSKQNHSKYPA 407
S+DS G + G +S H S CS + T+ K S YP+
Sbjct: 104 SRDSLQGLIQAAAGKGRKNSRATEEEPHRGATKSSGCSTYINRLIKVDTQEKNGKSNYPS 163
Query: 408 PSSSSSSSSSSSSSSPSSV 426
SSSSSSSSSS+SSSPSS+
Sbjct: 164 SSSSSSSSSSSASSSPSSL 182
>gi|112799847 cardiac muscle ryanodine receptor [Homo sapiens]
Length = 4967
Score = 44.3 bits (103), Expect = 3e-04
Identities = 28/99 (28%), Positives = 46/99 (46%), Gaps = 5/99 (5%)
Query: 91 RATHPIPAACGIYYFEVKIVSKGRDGYMGIGLSAQGVNMNRLPGWDKHSYGYHGDDGHSF 150
RA G +YFE + V+ G M +G S G ++ G D+ ++ + G +
Sbjct: 1089 RAEKTYAVKAGRWYFEFETVTAGD---MRVGWSRPGCQPDQELGSDERAFAFDGFKAQRW 1145
Query: 151 CSSGTGQPYGPTFTTGDVIGCCVNLINGTCFYTKNGHSL 189
+ YG ++ GDV+GC V++ T +T NG L
Sbjct: 1146 HQGN--EHYGRSWQAGDVVGCMVDMNEHTMMFTLNGEIL 1182
>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
Length = 953
Score = 43.9 bits (102), Expect = 4e-04
Identities = 33/97 (34%), Positives = 46/97 (47%), Gaps = 5/97 (5%)
Query: 353 SRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCS-----NGVASTKSKQNHSKYPA 407
S+SPK + SPS + R +S+ + S S S +G S++S+ S Y +
Sbjct: 522 SKSPKKKLGVSVSPSRARRRRKTSASSASASNSSRSSSRSSSYSGSGSSRSRSRSSSYSS 581
Query: 408 PSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSS 444
SS SS SS S S S ++S S S T S H S
Sbjct: 582 YSSRSSRHSSFSGSRSRSRSFSSSPSPSPTPSPHRPS 618
Score = 35.4 bits (80), Expect = 0.16
Identities = 23/68 (33%), Positives = 36/68 (52%)
Query: 386 SPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSST 445
SP GV+ + S+ + + SS+S+S+SS SSS SS + S S+ + S S + S +
Sbjct: 524 SPKKKLGVSVSPSRARRRRKTSASSASASNSSRSSSRSSSYSGSGSSRSRSRSSSYSSYS 583
Query: 446 SNQETSDS 453
S S
Sbjct: 584 SRSSRHSS 591
>gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [Homo
sapiens]
Length = 747
Score = 43.5 bits (101), Expect = 6e-04
Identities = 37/125 (29%), Positives = 56/125 (44%), Gaps = 20/125 (16%)
Query: 134 GWDKHSYGYHGDDGHSF-CSSGTGQPYGPTFTTGDVIGCCVNLING--TCFYTKNGHSLG 190
G D+ SYG+ DG +G + +G TF DVIGC N ++KNG LG
Sbjct: 328 GEDEFSYGF---DGRGLKAENGQFEEFGQTFGENDVIGCFANFETEEVELSFSKNGEDLG 384
Query: 191 IAF---TDLPANLYPTVGLQTPGEIVDANFGQ--QPFLFDIEDYMREWRAKVQGTVHCFP 245
+AF D A+ + +V+ NFGQ +PF E+++ +H P
Sbjct: 385 VAFWISKDSLADRALLPHVLCKNCVVELNFGQKEEPFFPPPEEFV---------FIHAVP 435
Query: 246 ISARL 250
+ R+
Sbjct: 436 VEERV 440
>gi|15055543 splicing factor, arginine/serine-rich 2B [Homo sapiens]
Length = 282
Score = 43.5 bits (101), Expect = 6e-04
Identities = 33/105 (31%), Positives = 52/105 (49%), Gaps = 3/105 (2%)
Query: 349 RSLSSRSPKSQDSYPGSPSLSPRHGPS---SSHMHNTGADSPSCSNGVASTKSKQNHSKY 405
RS SRSP S+ Y SP R+ S SH ++G + S +S ++ S
Sbjct: 157 RSPYSRSPYSRSRYSRSPYSRSRYRESRYGGSHYSSSGYSNSRYSRYHSSRSHSKSGSST 216
Query: 406 PAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQET 450
+ S+S+S SSS+ S SSV+ S S S S+ ++ S +++
Sbjct: 217 SSRSASTSKSSSARRSKSSSVSRSRSRSRSSSMTRSPPRVSKRKS 261
Score = 37.4 bits (85), Expect = 0.041
Identities = 37/139 (26%), Positives = 59/139 (42%), Gaps = 18/139 (12%)
Query: 371 RHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYP-APSSSSSSSSSSSSSSPSS---- 425
R S H + + PSCS + ++S+ S+Y +P S S S S S SP S
Sbjct: 123 RRSRSPRRRHRSRSRGPSCSR--SRSRSRYRGSRYSRSPYSRSPYSRSRYSRSPYSRSRY 180
Query: 426 -------VNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPNGVLGSMSTRIVNGA 478
+YS S ++S S++HSS S+ ++ S A + S + R + +
Sbjct: 181 RESRYGGSHYSSSGYSNSRYSRYHSSRSHSKSGSSTSSRSASTSKS----SSARRSKSSS 236
Query: 479 YKHEDLQTDESSMDDRHPR 497
++ SSM PR
Sbjct: 237 VSRSRSRSRSSSMTRSPPR 255
>gi|169166609 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 6 [Homo sapiens]
Length = 305
Score = 43.1 bits (100), Expect = 8e-04
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSP----SCSNGVASTK 397
N S R+ S K + + S + G D S S+G +ST+
Sbjct: 17 NNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTR 76
Query: 398 SKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTS 446
S+ + + S+S+ SSS SSSSS SS + S S S S+ S S S
Sbjct: 77 SRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPS 125
Score = 38.5 bits (88), Expect = 0.019
Identities = 25/79 (31%), Positives = 36/79 (45%)
Query: 375 SSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNST 434
S + GA S K+++ S SS+ S SSS+SSS S+ S S S+
Sbjct: 39 SKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSS 98
Query: 435 DSTKSQHHSSTSNQETSDS 453
S+ S S+S +S S
Sbjct: 99 SSSASSRSGSSSTSRSSSS 117
Score = 36.6 bits (83), Expect = 0.071
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Query: 352 SSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSS 411
SS + +D S S + S +T + S S G +S S SSS
Sbjct: 52 SSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSS----------SSS 101
Query: 412 SSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAE 460
+SS S SSS+S SS + S S S ++ +H + ++ S E E
Sbjct: 102 ASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKE 150
Score = 36.2 bits (82), Expect = 0.092
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 3/119 (2%)
Query: 349 RSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAP 408
+SL ++ S +PS + R S + D + + + K +
Sbjct: 9 KSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSA 68
Query: 409 SSSSSSS---SSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPN 464
SS SSS+ SSS+SSS SS + S+ + S+ + S +S+ S S P+
Sbjct: 69 SSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPS 127
Score = 35.8 bits (81), Expect = 0.12
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 357 KSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSS 416
+S + G R SS S + S+G +++ + S + SS S SSS
Sbjct: 51 ESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSS 110
Query: 417 SSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEME 456
+S SSS SS + S S S ++ S + ++ E E
Sbjct: 111 TSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKE 150
Score = 30.8 bits (68), Expect = 3.9
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
Query: 354 RSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSS 413
++ K + + GS S R +SS +T S S+G +S+ + SSSS
Sbjct: 61 KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGS---SSGSSSSSASSRSGSSSTSRSSSS 117
Query: 414 SSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDS 453
SSSS S S + + S +K + S S
Sbjct: 118 SSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPS 157
>gi|113415994 PREDICTED: similar to ribonucleic acid binding protein
S1 isoform 2 [Homo sapiens]
Length = 305
Score = 43.1 bits (100), Expect = 8e-04
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSP----SCSNGVASTK 397
N S R+ S K + + S + G D S S+G +ST+
Sbjct: 17 NNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTR 76
Query: 398 SKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTS 446
S+ + + S+S+ SSS SSSSS SS + S S S S+ S S S
Sbjct: 77 SRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPS 125
Score = 38.5 bits (88), Expect = 0.019
Identities = 25/79 (31%), Positives = 36/79 (45%)
Query: 375 SSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNST 434
S + GA S K+++ S SS+ S SSS+SSS S+ S S S+
Sbjct: 39 SKDRSKDKGATKESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSS 98
Query: 435 DSTKSQHHSSTSNQETSDS 453
S+ S S+S +S S
Sbjct: 99 SSSASSRSGSSSTSRSSSS 117
Score = 36.6 bits (83), Expect = 0.071
Identities = 31/109 (28%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Query: 352 SSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSS 411
SS + +D S S + S +T + S S G +S S SSS
Sbjct: 52 SSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSS----------SSS 101
Query: 412 SSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAE 460
+SS S SSS+S SS + S S S ++ +H + ++ S E E
Sbjct: 102 ASSRSGSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKE 150
Score = 36.2 bits (82), Expect = 0.092
Identities = 29/119 (24%), Positives = 49/119 (41%), Gaps = 3/119 (2%)
Query: 349 RSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAP 408
+SL ++ S +PS + R S + D + + + K +
Sbjct: 9 KSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRRSA 68
Query: 409 SSSSSSS---SSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPN 464
SS SSS+ SSS+SSS SS + S+ + S+ + S +S+ S S P+
Sbjct: 69 SSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPSPS 127
Score = 35.8 bits (81), Expect = 0.12
Identities = 27/100 (27%), Positives = 43/100 (43%)
Query: 357 KSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSS 416
+S + G R SS S + S+G +++ + S + SS S SSS
Sbjct: 51 ESSEKDRGRDKTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSS 110
Query: 417 SSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEME 456
+S SSS SS + S S S ++ S + ++ E E
Sbjct: 111 TSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKE 150
Score = 30.8 bits (68), Expect = 3.9
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 3/100 (3%)
Query: 354 RSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSS 413
++ K + + GS S R +SS +T S S+G +S+ + SSSS
Sbjct: 61 KTRKRRSASSGSSSTRSRSSSTSSSGSSTSTGS---SSGSSSSSASSRSGSSSTSRSSSS 117
Query: 414 SSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDS 453
SSSS S S + + S +K + S S
Sbjct: 118 SSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPS 157
>gi|113415504 PREDICTED: similar to ribonucleic acid binding protein
S1 [Homo sapiens]
Length = 305
Score = 43.1 bits (100), Expect = 8e-04
Identities = 33/109 (30%), Positives = 47/109 (43%), Gaps = 4/109 (3%)
Query: 342 NGTDSEVRSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSP----SCSNGVASTK 397
N S R+ S K + + S + G D S S+G +ST+
Sbjct: 17 NNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRHSASSGSSSTR 76
Query: 398 SKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTS 446
S+ + + S+S+ SSS SSSSS SS + S S S S+ S S S
Sbjct: 77 SRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSGSPS 125
Score = 41.6 bits (96), Expect = 0.002
Identities = 26/79 (32%), Positives = 37/79 (46%)
Query: 375 SSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSSSSSSSSPSSVNYSESNST 434
S + GA S K+++ HS SS+ S SSS+SSS S+ S S S+
Sbjct: 39 SKDRSKDKGATKESSEKDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSS 98
Query: 435 DSTKSQHHSSTSNQETSDS 453
S+ S S+S +S S
Sbjct: 99 SSSASSRSGSSSTSRSSSS 117
Score = 38.9 bits (89), Expect = 0.014
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 4/104 (3%)
Query: 357 KSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSS 416
+S + G RH SS S + S+G +++ + S SSS+SS S
Sbjct: 51 ESSEKDRGRDKTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSS----SSSASSRS 106
Query: 417 SSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAE 460
SSS+S SS + S S S ++ +H + ++ S E E
Sbjct: 107 GSSSTSRSSSSSSSSGSPSPSRRRHDNRRRSRSKSKPPKRDEKE 150
Score = 35.8 bits (81), Expect = 0.12
Identities = 30/117 (25%), Positives = 47/117 (40%), Gaps = 3/117 (2%)
Query: 349 RSLSSRSPKSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAP 408
+SL ++ S +PS + R S + D + + + K +
Sbjct: 9 KSLLGVKENNKKSSTRAPSPTKRKDRSDEKSKDRSKDKGATKESSEKDRGRDKTRKRHSA 68
Query: 409 SSSSSSSSSSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDSEMEMEAEHYPNG 465
SS SSS+ S SSS+ SS S ST S+ SS S++ S S + +G
Sbjct: 69 SSGSSSTRSRSSSTSSS---GSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSSSG 122
Score = 30.8 bits (68), Expect = 3.9
Identities = 24/97 (24%), Positives = 37/97 (38%)
Query: 357 KSQDSYPGSPSLSPRHGPSSSHMHNTGADSPSCSNGVASTKSKQNHSKYPAPSSSSSSSS 416
K++ + S S SSS + + S S+G +S+ + SSSSSSS
Sbjct: 61 KTRKRHSASSGSSSTRSRSSSTSSSGSSTSTGSSSGSSSSSASSRSGSSSTSRSSSSSSS 120
Query: 417 SSSSSSPSSVNYSESNSTDSTKSQHHSSTSNQETSDS 453
S S S + + S +K + S S
Sbjct: 121 SGSPSPSRRRHDNRRRSRSKSKPPKRDEKERKRRSPS 157
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,655,275
Number of Sequences: 37866
Number of extensions: 1364917
Number of successful extensions: 16727
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 456
Number of HSP's that attempted gapping in prelim test: 10032
Number of HSP's gapped (non-prelim): 4060
length of query: 620
length of database: 18,247,518
effective HSP length: 108
effective length of query: 512
effective length of database: 14,157,990
effective search space: 7248890880
effective search space used: 7248890880
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.