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Search of human proteins with 40354216
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens]
(739 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens] 1459 0.0
gi|142976638 sine oculis homeobox homolog 4 [Homo sapiens] 313 5e-85
gi|219275578 SIX homeobox 2 [Homo sapiens] 230 3e-60
gi|5174681 SIX homeobox 1 [Homo sapiens] 223 4e-58
gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens] 223 5e-58
gi|186910311 SIX homeobox 6 [Homo sapiens] 211 1e-54
gi|146219843 Snf2-related CBP activator protein [Homo sapiens] 72 2e-12
gi|7662236 TSC22 domain family, member 2 [Homo sapiens] 69 2e-11
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 67 6e-11
gi|163965366 nascent polypeptide-associated complex alpha subuni... 67 8e-11
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 66 1e-10
gi|110832843 TBP-associated factor 4 [Homo sapiens] 65 2e-10
gi|160707881 formin 2 [Homo sapiens] 64 4e-10
gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 63 9e-10
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 62 2e-09
gi|47132519 Ras association and pleckstrin homology domains 1 is... 62 2e-09
gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens] 62 3e-09
gi|112734870 hypothetical protein LOC57648 [Homo sapiens] 61 4e-09
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 60 6e-09
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 60 6e-09
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 60 6e-09
gi|149773456 hypothetical protein LOC643314 [Homo sapiens] 60 7e-09
gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens] 60 7e-09
gi|194272172 double homeobox, 4 [Homo sapiens] 60 7e-09
gi|163914392 glioma tumor suppressor candidate region gene 1 [Ho... 60 7e-09
gi|194272217 double homeobox, 4-like [Homo sapiens] 60 7e-09
gi|194272216 double homeobox, 4-like [Homo sapiens] 60 7e-09
gi|194272215 double homeobox, 4-like [Homo sapiens] 60 7e-09
gi|194272192 double homeobox, 4-like [Homo sapiens] 60 7e-09
gi|91982772 mucin 17 [Homo sapiens] 60 1e-08
>gi|40354216 sine oculis homeobox homolog 5 [Homo sapiens]
Length = 739
Score = 1459 bits (3776), Expect = 0.0
Identities = 739/739 (100%), Positives = 739/739 (100%)
Query: 1 MATLPAEPSAGPAAGGEAVAAAAATEEEEEEARQLLQTLQAAEGEAAAAAGAGAGAAAAG 60
MATLPAEPSAGPAAGGEAVAAAAATEEEEEEARQLLQTLQAAEGEAAAAAGAGAGAAAAG
Sbjct: 1 MATLPAEPSAGPAAGGEAVAAAAATEEEEEEARQLLQTLQAAEGEAAAAAGAGAGAAAAG 60
Query: 61 AEGPGSPGVPGSPPEAASEPPTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERL 120
AEGPGSPGVPGSPPEAASEPPTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERL
Sbjct: 61 AEGPGSPGVPGSPPEAASEPPTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERL 120
Query: 121 RGSDPVLRARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRAL 180
RGSDPVLRARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRAL
Sbjct: 121 RGSDPVLRARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRAL 180
Query: 181 GAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGL 240
GAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGL
Sbjct: 181 GAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGL 240
Query: 241 SLTQVSNWFKNRRQRDRTGAGGGAPCKSESDGNPTTEDESSRSPEDLERGAAPVSAEAAA 300
SLTQVSNWFKNRRQRDRTGAGGGAPCKSESDGNPTTEDESSRSPEDLERGAAPVSAEAAA
Sbjct: 241 SLTQVSNWFKNRRQRDRTGAGGGAPCKSESDGNPTTEDESSRSPEDLERGAAPVSAEAAA 300
Query: 301 QGSIFLAGTGPPAPCPASSSILVNGSFLAASGSPAVLLNGGPVIINGLALGEASSLGPLL 360
QGSIFLAGTGPPAPCPASSSILVNGSFLAASGSPAVLLNGGPVIINGLALGEASSLGPLL
Sbjct: 301 QGSIFLAGTGPPAPCPASSSILVNGSFLAASGSPAVLLNGGPVIINGLALGEASSLGPLL 360
Query: 361 LTGGGGAPPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEE 420
LTGGGGAPPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEE
Sbjct: 361 LTGGGGAPPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEE 420
Query: 421 VLGPLAQVVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLSPTSPLLNLPQVVP 480
VLGPLAQVVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLSPTSPLLNLPQVVP
Sbjct: 421 VLGPLAQVVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLSPTSPLLNLPQVVP 480
Query: 481 TSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFL 540
TSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFL
Sbjct: 481 TSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFL 540
Query: 541 LANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPETAISVPEGGL 600
LANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPETAISVPEGGL
Sbjct: 541 LANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPETAISVPEGGL 600
Query: 601 PVAPSPALPEAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGLLPNFPAPPPEGLMLSPA 660
PVAPSPALPEAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGLLPNFPAPPPEGLMLSPA
Sbjct: 601 PVAPSPALPEAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGLLPNFPAPPPEGLMLSPA 660
Query: 661 AVPVWSAGLELSAGTEGLLEAEKGLGTQAPHTVLRLPDPDPEGLLLGATAGGEVDEGLEA 720
AVPVWSAGLELSAGTEGLLEAEKGLGTQAPHTVLRLPDPDPEGLLLGATAGGEVDEGLEA
Sbjct: 661 AVPVWSAGLELSAGTEGLLEAEKGLGTQAPHTVLRLPDPDPEGLLLGATAGGEVDEGLEA 720
Query: 721 EAKVLTQLQSVPVEEPLEL 739
EAKVLTQLQSVPVEEPLEL
Sbjct: 721 EAKVLTQLQSVPVEEPLEL 739
>gi|142976638 sine oculis homeobox homolog 4 [Homo sapiens]
Length = 781
Score = 313 bits (801), Expect = 5e-85
Identities = 190/370 (51%), Positives = 232/370 (62%), Gaps = 37/370 (10%)
Query: 5 PAEPSAGPAAGGEAVAAAAATEEEEEEARQLLQTLQAAEGEAAAAAGAGAGAAAAGAEGP 64
P P+ P G+A AAA EE AAAAAGA A +E
Sbjct: 45 PPAPAPFPLEPGDAATAAARVSGEEGAV-------------AAAAAGAAADQVQLHSELL 91
Query: 65 GSPGVPGSPPEAASEPPTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSD 124
G AA+ T L FSP+ VACVCEAL Q G+ RL+RFL +LP ++ LRG++
Sbjct: 92 GR-----HHHAAAAAAQTPLAFSPDHVACVCEALQQGGNLDRLARFLWSLPQSDLLRGNE 146
Query: 125 PVLRARALVAFQRGEYAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVD 184
+L+ARALVAF +G Y ELY +LES F +A+H LQ L+ +ARY EAERARGR LGAVD
Sbjct: 147 SLLKARALVAFHQGIYPELYSILESHSFESANHPLLQQLWYKARYTEAERARGRPLGAVD 206
Query: 185 KYRLRKKFPLPKTIWDGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQ 244
KYRLR+KFPLP+TIWDGEETVYCFKE+SR ALK Y+ NRYP+P EKR LA +TGLSLTQ
Sbjct: 207 KYRLRRKFPLPRTIWDGEETVYCFKEKSRNALKELYKQNRYPSPAEKRHLAKITGLSLTQ 266
Query: 245 VSNWFKNRRQRDRTGAGGGAPCKSESDGNPTTEDESSRSPEDLERGAAPVSAEAAAQGS- 303
VSNWFKNRRQRDR + KSESDGNP+TEDESS+ EDL S++ S
Sbjct: 267 VSNWFKNRRQRDRNPS--ETQSKSESDGNPSTEDESSKGHEDLSPHPLSSSSDGITNLSL 324
Query: 304 ------IFLAGTGPPAPCPASSSILVNGSFLAASGSPAVLLNG-----GP--VIINGLAL 350
+++ G +SS +L+NGS + AS SP V LNG GP VI+NGL +
Sbjct: 325 SSHMEPVYMQQIGNAKISLSSSGVLLNGSLVPASTSP-VFLNGNSFIQGPSGVILNGLNV 383
Query: 351 G--EASSLGP 358
G +A +L P
Sbjct: 384 GNTQAVALNP 393
>gi|219275578 SIX homeobox 2 [Homo sapiens]
Length = 291
Score = 230 bits (587), Expect = 3e-60
Identities = 135/289 (46%), Positives = 173/289 (59%), Gaps = 31/289 (10%)
Query: 86 FSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYR 145
F+ EQVACVCE L Q G+ RL RFL +LP E L ++ VL+A+A+VAF RG + ELY+
Sbjct: 9 FTQEQVACVCEVLQQGGNIERLGRFLWSLPACEHLHKNESVLKAKAVVAFHRGNFRELYK 68
Query: 146 LLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETV 205
+LES F +HA LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP++IWDGEET
Sbjct: 69 ILESHQFSPHNHAKLQQLWLKAHYIEAEKLRGRPLGAVGKYRVRRKFPLPRSIWDGEETS 128
Query: 206 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTGAGGGAP 265
YCFKE+SR+ L+ Y N YP+P EKR LA TGL+ TQVSNWFKNRRQRDR
Sbjct: 129 YCFKEKSRSVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDRA------- 181
Query: 266 CKSESDGNPTTEDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGPPAPCPASSSILVNG 325
+E+ E+ +S S L V + + + P+ P S
Sbjct: 182 --AEAKERENNENSNSNSHNPLNGSGKSVLGSSEDEKT--------PSGTPDHS------ 225
Query: 326 SFLAASGSPAVLLNGGPVIINGL-ALGE--ASSLGPLLLTGGGGAPPPQ 371
S SPA+LL+ P + L +LG S P+ + GGGGA P Q
Sbjct: 226 -----SSSPALLLSPPPPGLPSLHSLGHPPGPSAVPVPVPGGGGADPLQ 269
>gi|5174681 SIX homeobox 1 [Homo sapiens]
Length = 284
Score = 223 bits (569), Expect = 4e-58
Identities = 120/248 (48%), Positives = 159/248 (64%), Gaps = 12/248 (4%)
Query: 86 FSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYR 145
F+ EQVACVCE L Q G+ RL RFL +LP + L ++ VL+A+A+VAF RG + ELY+
Sbjct: 9 FTQEQVACVCEVLQQGGNLERLGRFLWSLPACDHLHKNESVLKAKAVVAFHRGNFRELYK 68
Query: 146 LLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETV 205
+LES F +H LQ L+L+A Y EAE+ RGR LGAV KYR+R+KFPLP+TIWDGEET
Sbjct: 69 ILESHQFSPHNHPKLQQLWLKAHYVEAEKLRGRPLGAVGKYRVRRKFPLPRTIWDGEETS 128
Query: 206 YCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTGAGGGAP 265
YCFKE+SR L+ Y N YP+P EKR LA TGL+ TQVSNWFKNRRQRDR A
Sbjct: 129 YCFKEKSRGVLREWYAHNPYPSPREKRELAEATGLTTTQVSNWFKNRRQRDR--AAEAKE 186
Query: 266 CKSESDGNPTTEDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGPPAPCPASSSILVNG 325
++ + N ++ ++ SP + G P+ + + + S PP +S +L+ G
Sbjct: 187 RENTENNNSSSNKQNQLSPLE---GGKPLMSSSEEEFS-------PPQSPDQNSVLLLQG 236
Query: 326 SFLAASGS 333
+ A S
Sbjct: 237 NMGHARSS 244
>gi|4885597 sine oculis homeobox homolog 3 [Homo sapiens]
Length = 332
Score = 223 bits (568), Expect = 5e-58
Identities = 136/292 (46%), Positives = 170/292 (58%), Gaps = 23/292 (7%)
Query: 44 GEAAAAAGAGAGAAAAGAEGPGSPGVPGS--PPEAAS--EPPTGLRFSPEQVACVCEALL 99
G A +G G GA GA G G G GS PPE S + PT L FSPEQVA VCE L
Sbjct: 42 GGAGGGSGGGNGAGGGGAGGAGGGGGGGSRAPPEELSMFQLPT-LNFSPEQVASVCETLE 100
Query: 100 QAGHAGRLSRFLGALPPA----ERLRGSDPVLRARALVAFQRGEYAELYRLLESRPFPAA 155
+ G RL RFL +LP A E + + +LRARA+VAF G + +LY +LE+ F
Sbjct: 101 ETGDIERLGRFLWSLPVAPGACEAINKHESILRARAVVAFHTGNFRDLYHILENHKFTKE 160
Query: 156 HHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETVYCFKERSRAA 215
H LQ ++L A Y EAE+ RGR LG VDKYR+RKKFPLP+TIWDGE+ +CFKER+R+
Sbjct: 161 SHGKLQAMWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIWDGEQKTHCFKERTRSL 220
Query: 216 LKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTGAG---------GGAPC 266
L+ Y + YP P +KR LA TGL+ TQV NWFKNRRQRDR A G +
Sbjct: 221 LREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAAAAKNRLQHQAIGPSGM 280
Query: 267 KSESD-GNPTTEDESSRSPEDLERGAAPVSA--EAAAQGSIFLAGTGPPAPC 315
+S ++ G PT S+ SP VS+ E A G+ L+ T + C
Sbjct: 281 RSLAEPGCPT--HGSAESPSTAASPTTSVSSLTERADTGTSILSVTSSDSEC 330
>gi|186910311 SIX homeobox 6 [Homo sapiens]
Length = 246
Score = 211 bits (538), Expect = 1e-54
Identities = 112/207 (54%), Positives = 134/207 (64%), Gaps = 16/207 (7%)
Query: 84 LRFSPEQVACVCEALLQAGHAGRLSRFLGALPPA----ERLRGSDPVLRARALVAFQRGE 139
L FSP+QVA VCE L ++G RL RFL +LP A E L ++ VLRARA+VAF G
Sbjct: 7 LNFSPQQVAGVCETLEESGDVERLGRFLWSLPVAPAACEALNKNESVLRARAIVAFHGGN 66
Query: 140 YAELYRLLESRPFPAAHHAFLQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIW 199
Y ELY +LE+ F HA LQ L+L A Y EAE+ RGR LG VDKYR+RKKFPLP+TIW
Sbjct: 67 YRELYHILENHKFTKESHAKLQALWLEAHYQEAEKLRGRPLGPVDKYRVRKKFPLPRTIW 126
Query: 200 DGEETVYCFKERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTG 259
DGE+ +CFKER+R L+ Y + YP P +KR LA TGL+ TQV NWFKNRRQRDR
Sbjct: 127 DGEQKTHCFKERTRHLLREWYLQDPYPNPSKKRELAQATGLTPTQVGNWFKNRRQRDRAA 186
Query: 260 A------------GGGAPCKSESDGNP 274
A G G ++E DG P
Sbjct: 187 AAKNRLQQQVLSQGSGRALRAEGDGTP 213
>gi|146219843 Snf2-related CBP activator protein [Homo sapiens]
Length = 3230
Score = 71.6 bits (174), Expect = 2e-12
Identities = 103/363 (28%), Positives = 140/363 (38%), Gaps = 74/363 (20%)
Query: 358 PLLLTGGGGAPPPQPSPQGASETKTSLVLDPQTGEVRLE-----EAQSEAPET----KGA 408
P L G +P P P+ + +S V P + + + A + AP T
Sbjct: 1404 PSSLPGPASSPMPIPNSSPLASPVSSTVSVPLSSSLPISVPTTLPAPASAPLTIPISAPL 1463
Query: 409 QVAAPGPALGEEVLGPLAQVV---PGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTG 465
V+A GPAL V PLA VV PGPP+ A P G P+ +A + L+ P +
Sbjct: 1464 TVSASGPALLTSVTPPLAPVVPAAPGPPSLA----PSGASPSASA-LTLGLATAPSLSSS 1518
Query: 466 LSPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGV 525
+P PLL + PTS V PG VA A P V
Sbjct: 1519 QTPGHPLL----LAPTSSHV---------------PGLNSTVAPACSPVL-------VPA 1552
Query: 526 TALQLPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLAL 585
+AL P +AP NP A Q ++ A+ + L + + P A
Sbjct: 1553 SALASPFPSAP------NP----------APAQASLLAPASSASQALATPLAPMA----- 1591
Query: 586 PLKPETAISVPEGGLPVAPSPAL-PEAHALGTL-SAQQPPPAAATTSSTSLPFSPDSPGL 643
P+TAI P P+AP P L P A L S+Q P P A +S+ + SP
Sbjct: 1592 --APQTAILAPSPAPPLAPLPVLAPSPGAAPVLASSQTPVPVMAPSSTPGTSLASASPVP 1649
Query: 644 LPNFPAPPPEGLMLSPAAVPVWSAGLELSAGTEGLLEA---EKGLGTQAPHTVLRLPDPD 700
P P + PA VP + L A T+ L A LG +P L L +
Sbjct: 1650 APTPVLAPSSTQTMLPAPVP---SPLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGN 1706
Query: 701 PEG 703
P+G
Sbjct: 1707 PQG 1709
Score = 63.5 bits (153), Expect = 7e-10
Identities = 102/392 (26%), Positives = 150/392 (38%), Gaps = 66/392 (16%)
Query: 268 SESDGNPTTEDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGP--PAPCPASSSILVNG 325
S++ G+P +S L AP + S LA P P P PA +S+L
Sbjct: 1518 SQTPGHPLLLAPTSSHVPGLNSTVAPACSPVLVPASA-LASPFPSAPNPAPAQASLLAP- 1575
Query: 326 SFLAASGSPAVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQPSPQGASETKTSLV 385
A+S S A+ P +A + + L P APP P P V
Sbjct: 1576 ---ASSASQALATPLAP-----MAAPQTAILAP------SPAPPLAPLP----------V 1611
Query: 386 LDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATF-PLP-PG 443
L P G + A S+ P A + PG +L P V P + T P P P
Sbjct: 1612 LAPSPGAAPVL-ASSQTPVPVMAPSSTPGTSLASASPVPAPTPVLAPSSTQTMLPAPVPS 1670
Query: 444 PVPAVAAPQVVPLSPP-----------------PGYPTGLSPTSPLLNLP--QVVPT-SQ 483
P+P+ A+ Q + L+P G P G PT L P +VPT +Q
Sbjct: 1671 PLPSPASTQTLALAPALAPTLGGSSPSQTLSLGTGNPQGPFPTQTLSLTPASSLVPTPAQ 1730
Query: 484 VVTLPQA--VGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFLL 541
++L +GP Q L+ P P+ A+ GPA H + ++ L + + L
Sbjct: 1731 TLSLAPGPPLGPTQTLSLAPAPPLAPASPVGPAPAHTLTLAPASSSASLLAPASVQTLTL 1790
Query: 542 ANPVSGSPIVT-GVAVQQGKIILTAT--FPTSMLVSQVLPPAPGLALPLKPETAISVPE- 597
S +P+ T G A Q + A+ P S S V+ + LP+ + + V +
Sbjct: 1791 ----SPAPVPTLGPAAAQTLALAPASTQSPASQASSLVVSASGAAPLPVTMVSRLPVSKD 1846
Query: 598 --GGLPVAPSPALPEAHAL---GTLSAQQPPP 624
L + P P + A G +QPPP
Sbjct: 1847 EPDTLTLRSGPPSPPSTATSFGGPRPRRQPPP 1878
Score = 56.2 bits (134), Expect = 1e-07
Identities = 124/487 (25%), Positives = 173/487 (35%), Gaps = 101/487 (20%)
Query: 293 PVSAEAAAQGSIFLAGTGPPAPCPASSSILVNGSFLAASGSPAVLLNGGPVIINGLALGE 352
P +A + + T PAP PA ++++ A L G V+ ++G+
Sbjct: 1141 PAAATTTSTTTATATTTAVPAPTPAPQRLILSPDMQAR-------LPSGEVV----SIGQ 1189
Query: 353 ASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLDP---------QTGEVRLEEAQ---- 399
+SL + GG+ P QG T T + Q V L A
Sbjct: 1190 LASLAQRPVANAGGSKPLTFQIQGNKLTLTGAQVRQLAVGQPRPLQRNVVHLVSAGGQHH 1249
Query: 400 --SEAPETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATFPLPPGPVPAVAAPQVVP-- 455
S+ Q AP P GP V T +T P P G +AA QV P
Sbjct: 1250 LISQPAHVALIQAVAPTP-------GPTPVSVLPSSTPSTTPAPTGLSLPLAANQVPPTM 1302
Query: 456 ------------------LSPPPGYPTGLSPTSPLLNLPQV-----------VPTSQVVT 486
L+P P P +P P LP V +PT + T
Sbjct: 1303 VNNTGVVKIVVRQAPRDGLTPVP--PLAPAPRPPSSGLPAVLNPRPTLTPGRLPTPTLGT 1360
Query: 487 ------LPQAVGPLQLLAAGPGSPVKVAA-AAGPANV----HLINSGVGVTALQLPSATA 535
P V PL L P V +A A P + H+ +S G + +P
Sbjct: 1361 ARAPMPTPTLVRPLLKLVHSPSPEVSASAPGAAPLTISSPLHVPSSLPGPASSPMP---I 1417
Query: 536 PGNFLLANPVSGS---PIVTGVAVQQGKII-LTATFPTSMLVS---QVLPPAPGLALPLK 588
P + LA+PVS + P+ + + + + A+ P ++ +S V P L +
Sbjct: 1418 PNSSPLASPVSSTVSVPLSSSLPISVPTTLPAPASAPLTIPISAPLTVSASGPALLTSVT 1477
Query: 589 PETAISVPEGGLP--VAPSPALPEAHALGTLSAQQPPPAAATTSSTSLPFSPDS---PGL 643
P A VP P +APS A P A AL A P +++ T L +P S PGL
Sbjct: 1478 PPLAPVVPAAPGPPSLAPSGASPSASALTLGLATAPSLSSSQTPGHPLLLAPTSSHVPGL 1537
Query: 644 LPNF-PAPPPEGLMLSPAAVPVWSAGLELSAGTEGLL---EAEKGLGT-----QAPHTVL 694
PA P + S A P SA A L A + L T AP T +
Sbjct: 1538 NSTVAPACSPVLVPASALASPFPSAPNPAPAQASLLAPASSASQALATPLAPMAAPQTAI 1597
Query: 695 RLPDPDP 701
P P P
Sbjct: 1598 LAPSPAP 1604
Score = 53.1 bits (126), Expect = 9e-07
Identities = 67/272 (24%), Positives = 95/272 (34%), Gaps = 48/272 (17%)
Query: 368 PPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVL-GPLA 426
PPP+P P + + Q G + AP PGP L + GP+
Sbjct: 983 PPPRPKPVKMKVNRMLQPVPKQEGRTVVVVNNPRAPLGPVPVRPPPGPELSAQPTPGPVP 1042
Query: 427 QVVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLSPTSPLL-NLPQVVPTSQVV 485
QV+P + P A P ++P S PPG P L P P +LPQV+P+ V
Sbjct: 1043 QVLPASLMVSASP---------AGPPLIPASRPPG-PVLLPPLQPNSGSLPQVLPSPLGV 1092
Query: 486 TLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFLLANPV 545
+ P L+ P P V +L A PG+ L P+
Sbjct: 1093 LSGTSRPPTPTLSLKPTPPAPV---------------------RLSPAPPPGSSSLLKPL 1131
Query: 546 SGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPG-LALPLKPETAISVPEGGLPVAP 604
+ P G T+T + + V P P L L P+ +P G
Sbjct: 1132 TVPP---GYTFPPAAATTTSTTTATATTTAVPAPTPAPQRLILSPDMQARLPSG------ 1182
Query: 605 SPALPEAHALGTLSAQQPPPAAATTSSTSLPF 636
E ++G L++ P A S L F
Sbjct: 1183 -----EVVSIGQLASLAQRPVANAGGSKPLTF 1209
Score = 49.3 bits (116), Expect = 1e-05
Identities = 81/320 (25%), Positives = 122/320 (38%), Gaps = 73/320 (22%)
Query: 367 APPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLA 426
AP P+P+P A +LV P + V ++AP P V
Sbjct: 2440 APRPRPTPASAPAAIPALVPVPVSAPV---------------PISAPNPITILPV----- 2479
Query: 427 QVVPGPPTAATFPLPPGPVPAVAAPQVVPL---------SPPPGYPTGLSPTSPLLNLPQ 477
++P PP PP +P ++P P +PPP ++P+SPLL P
Sbjct: 2480 HILPSPP-------PPSQIPPCSSPACTPPPACTPPPAHTPPPAQTCLVTPSSPLLLGPP 2532
Query: 478 VVPTSQVVT-LPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAP 536
VP S VT LP + P L A A A P ++ L + V + S P
Sbjct: 2533 SVPISASVTNLPLGLRPEAELCA--------QALASPESLEL--ASVASSETSSLSLVPP 2582
Query: 537 GNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPE--TAIS 594
+ L PV+ V + V + + LT + P+ L + +P P E T
Sbjct: 2583 KDLL---PVA----VEILPVSEKNLSLTPSAPSLTLEAGSIPNGQEQEAPDSAEGTTLTV 2635
Query: 595 VPEG-GLPVAPSPALPEAHALGTLSAQQPPPAAATTSSTSLPFSPD------SPGLLPNF 647
+PEG LP+ S E++ L + PP+AA+ P D + P
Sbjct: 2636 LPEGEELPLCVS----ESNGL------ELPPSAASDEPLQEPLEADRTSEELTEAKTPTS 2685
Query: 648 PAPPPEGLMLSPAAVPVWSA 667
P+ L+ + A P S+
Sbjct: 2686 SPEKPQELVTAEVAAPSTSS 2705
Score = 45.1 bits (105), Expect = 2e-04
Identities = 81/307 (26%), Positives = 115/307 (37%), Gaps = 47/307 (15%)
Query: 209 KERSRAALKACYRGNRYP-TPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTGAGGG-APC 266
+ R+ A ++ +G P P + L L G +T V RR+R + GA P
Sbjct: 2721 RRRTSADVEIRGQGTGRPGQPPGPKVLRKLPGRLVTVVEEKELVRRRRQQRGAASTLVPG 2780
Query: 267 KSESDGNPTTEDESSRS-PEDLERGAAPVSAEAAAQGSIFLAGTGPPAPCPASSSILV-- 323
SE+ +P + S S PE P EAA S+ T P P A I +
Sbjct: 2781 VSETSASPGSPSVRSMSGPESSPPIGGP--CEAAPSSSL---PTPPQQPFIARRHIELGV 2835
Query: 324 ---------NGSFLAASGSPAVLLNGGPVIIN------GLALGEASSLGPLLLTGGGGAP 368
+G+ LA + G P N G + EA S L G
Sbjct: 2836 TGGGSPENGDGALLAITPPAVKRRRGRPPKKNRSPADAGRGVDEAPSS---TLKGKTNGA 2892
Query: 369 PPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQ-VAAPGPALGEEVLGPLAQ 427
P P P+ T +V DP LE P+ G Q V P P +L P+ +
Sbjct: 2893 DPVPGPE------TLIVADPV-----LEPQLIPGPQPLGPQPVHRPNP-----LLSPVEK 2936
Query: 428 VVPG-PPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVT 486
G PP A P+P G + + + PP +P+ L+P PLL P + V T
Sbjct: 2937 RRRGRPPKARDLPIP-GTISSAGDGNSESRTQPPPHPSPLTPLPPLLVCPTATVANTVTT 2995
Query: 487 LPQAVGP 493
+ + P
Sbjct: 2996 VTISTSP 3002
Score = 35.0 bits (79), Expect = 0.25
Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 6/72 (8%)
Query: 370 PQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVL-GPLAQV 428
P P+ +T +V D TG + A S +P + GA +P + L GP
Sbjct: 5 PSPAHPQLPVLQTQMVSDGMTGSNPVSPASSSSPASSGAGGISPQHIAQDSSLDGP---- 60
Query: 429 VPGPPTAATFPL 440
PGPP AT PL
Sbjct: 61 -PGPPDGATVPL 71
Score = 30.8 bits (68), Expect = 4.7
Identities = 51/184 (27%), Positives = 72/184 (39%), Gaps = 32/184 (17%)
Query: 287 LERGAAPVSAEAAAQGSIFLAGTGPPAPCPASSSILVNGSFLAASGSPAVLLNGGPVIIN 346
L P AAAQ ++ LA +P +SS++V+ S A+ P +++ PV +
Sbjct: 1790 LSPAPVPTLGPAAAQ-TLALAPASTQSPASQASSLVVSAS--GAAPLPVTMVSRLPVSKD 1846
Query: 347 G---LALGEASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAP 403
L L P T GG P+P Q ++ LD E + + +SE
Sbjct: 1847 EPDTLTLRSGPPSPPSTATSFGG---PRPRRQPPPPPRSPFYLDSL--EEKRKRQRSERL 1901
Query: 404 ETKGAQVAAPG---PALGEEVLGPLAQVVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPP 460
E A G P G EVL T P P VA+P + P SP P
Sbjct: 1902 ERIFQLSEAHGALAPVYGTEVLD-----------FCTLPQP------VASP-IGPRSPGP 1943
Query: 461 GYPT 464
+PT
Sbjct: 1944 SHPT 1947
>gi|7662236 TSC22 domain family, member 2 [Homo sapiens]
Length = 780
Score = 68.6 bits (166), Expect = 2e-11
Identities = 93/333 (27%), Positives = 124/333 (37%), Gaps = 62/333 (18%)
Query: 366 GAPPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPL 425
G P P P P G + ++S L P G A P AQ + P A GP
Sbjct: 272 GQPQPPPPPVGGAVAQSSAPLPPFPG-----AATGPQPMMAAAQPSQPQGA------GPG 320
Query: 426 AQVVPGPPTAAT-----FPLPPGPVPAVAAPQVVPLSPPPGYPTGLSPTSPLLNLPQVVP 480
Q + PPT T LPP P PAV AP YP P P +L V P
Sbjct: 321 GQTL--PPTNVTLAQPAMSLPPQPGPAVGAP-AAQQPQQFAYP---QPQIPPGHLLPVQP 374
Query: 481 TSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTA----LQLPSATAP 536
+ Q L Q V LQ P P AAA PA + G G A QL A++
Sbjct: 375 SGQSEYLQQHVAGLQ--PPSPAQPSSTGAAASPATAATLPVGTGQNASSVGAQLMGASSQ 432
Query: 537 GNFLLA---NPVSGSPIV----TGV-AVQQGKIILTATFPTSMLVSQVLPPAPGLALPLK 588
+ +A P G + TGV G ++ P Q +PP
Sbjct: 433 PSEAMAPRTGPAQGGQVAPCQPTGVPPATVGGVVQPCLGPAGAGQPQSVPP--------- 483
Query: 589 PETAISVPEGGLPVAPSPALPEAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGLLPNFP 648
P+ S P +P P +P + + A P P+ + S+TS+ +PN P
Sbjct: 484 PQMGGSGPLSAVPGGPHAVVP---GVPNVPAAVPAPSVPSVSTTSV--------TMPNVP 532
Query: 649 APPPEGLMLSP------AAVPVWSAGLELSAGT 675
AP + LS ++ + GL L+ GT
Sbjct: 533 APLAQSQQLSSHTPVSRSSSIIQHVGLPLAPGT 565
Score = 43.5 bits (101), Expect = 7e-04
Identities = 94/371 (25%), Positives = 122/371 (32%), Gaps = 78/371 (21%)
Query: 314 PCPASSSILVNGSFLAASGSPAVLLNGGPVIINGLALGEASSL---------------GP 358
P S ++L++G AA+ +PA NGG V+ G +S GP
Sbjct: 81 PGTVSPNLLLDGQLAAAAAAPA---NGGGVVSARSVSGALASTLAAAATSAPAPGAPGGP 137
Query: 359 LLLTGGGG---APPPQPSPQGASETKTSLVLDPQTGE---------VRLEEAQSEAPETK 406
L G A P QP P S + LD +GE + E S++
Sbjct: 138 QLAGSSAGPVTAAPSQP-PTTCSSRFRVIKLDHGSGEPYRRGRWTCMEYYERDSDSSVLT 196
Query: 407 GA-----------QVAAPGPALGEEVLGPLAQVVPGPPTAATFPLPPGPVPAVAAPQVVP 455
+ Q A LG G VV A P G ++ A +P
Sbjct: 197 RSGDCIRHSSTFDQTAERDSGLG--ATGGSVVVVVASMQGAHGP-ESGTDSSLTAVSQLP 253
Query: 456 LSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPAN 515
S PT P S + PQ P + Q+ PL P + AAA P+
Sbjct: 254 PSEKMSQPTPAQPQSFSVGQPQPPPPPVGGAVAQSSAPLPPFPGAATGPQPMMAAAQPSQ 313
Query: 516 VHLINSGVGVTALQLPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQ 575
G G LP P N LA P P G AV P + Q
Sbjct: 314 ----PQGAGPGGQTLP----PTNVTLAQPAMSLPPQPGPAVGA---------PAAQQPQQ 356
Query: 576 VLPPAPGLALPLKPETAISVPEGG-LPVAPSPALPEAHALGTLSAQQPPPAAATTSSTSL 634
P P +P G LPV PS ++ L A PP+ A SST
Sbjct: 357 FAYPQP------------QIPPGHLLPVQPS---GQSEYLQQHVAGLQPPSPAQPSSTGA 401
Query: 635 PFSPDSPGLLP 645
SP + LP
Sbjct: 402 AASPATAATLP 412
Score = 30.4 bits (67), Expect = 6.2
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 8/73 (10%)
Query: 6 AEPSAGPAAGGEAVAAAAATEEEEEEARQLLQTLQAAEGEAAAAAGAGAGAAAAGAEGPG 65
A +A PA GG V+A + + L + AA +A A GA G AG+
Sbjct: 95 AAAAAAPANGGGVVSARSVSGA--------LASTLAAAATSAPAPGAPGGPQLAGSSAGP 146
Query: 66 SPGVPGSPPEAAS 78
P PP S
Sbjct: 147 VTAAPSQPPTTCS 159
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 67.0 bits (162), Expect = 6e-11
Identities = 85/311 (27%), Positives = 116/311 (37%), Gaps = 58/311 (18%)
Query: 367 APPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLA 426
+PP PS S+ SL P L+ S + A P P + P
Sbjct: 682 SPPVSPSATPPSQAPPSLAAPP------LQVPPSPPASPPMSPSATPPPQAPPPLAAPPL 735
Query: 427 QVVPGPPTAATFPLPPGPVPAVAAPQVV---PLSPPPGYPTGLSPTSPLLNLPQVVPTSQ 483
QV P PP A+ P+ P P P ++ PL PP P L P SPL P P +
Sbjct: 736 QVPPSPP--ASPPMSPSATPPPRVPPLLAAPPLQVPPSPPASL-PMSPLAKPPPQAPPA- 791
Query: 484 VVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFLLAN 543
A PLQ L + P S A + PSA+ P + L
Sbjct: 792 -----LATPPLQALPSPPASFPGQAPFS-------------------PSASLPMSPLATP 827
Query: 544 PVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPETAISVPEGGLPVA 603
P P++ +Q + + + L + PP PG P+T++S P L +A
Sbjct: 828 PPQAPPVLAAPLLQ----VPPSPPASPTLQAPRRPPTPG------PDTSVSGPRLTLALA 877
Query: 604 PSPALPEAHA-LGTLSAQQPPPAAATTSSTSLP-----FSPDSPGLLPNFPAPPPEGLML 657
P P P + + TLS P A ++S+TS P + G P P E
Sbjct: 878 PGPPPPPSRSPSSTLSG--PDLAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAAC 935
Query: 658 SPAAVPVWSAG 668
PAA WS G
Sbjct: 936 HPAA---WSRG 943
Score = 65.9 bits (159), Expect = 1e-10
Identities = 116/468 (24%), Positives = 160/468 (34%), Gaps = 83/468 (17%)
Query: 292 APVSAEAAAQGSIFLAGTGPPAPCPASSSILVNGSFLAASGSPAVLLNGGPVIINGL--- 348
+P +A+ A T P +P + L L S SPAV P+ I+ L
Sbjct: 433 SPRQTQASLTSPSRPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQAL 492
Query: 349 -ALGEASSLGPL-------LLTGGGGAPPPQPSPQGASETKT-----SLVLDP-QTGEVR 394
+L S PL L T APP +P + T SL P QT
Sbjct: 493 SSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAP 552
Query: 395 LEEAQSEAPETKG-------------------AQVAAPGPALGEEVLGPLAQVVPGPPTA 435
L E P + +A P P + P Q +P PP +
Sbjct: 553 LTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLS 612
Query: 436 ATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLPQA----- 490
PP P +A P PL PP P P SPL P + V L QA
Sbjct: 613 PLATPPPQAPPXLALP---PLQAPPS-PPASPPLSPLATPSPQAPNALAVHLLQAPFSPP 668
Query: 491 -VGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFLLANPVSGSP 549
P+Q + P SP +A P+ + + P A+ P + P P
Sbjct: 669 PSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPP 728
Query: 550 IVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPETA--------ISVPEGGLP 601
+ +Q +PP+P + P+ P ++ P +P
Sbjct: 729 PLAAPPLQ-------------------VPPSPPASPPMSPSATPPPRVPPLLAAPPLQVP 769
Query: 602 VAPSPALPEAHALGTLSAQQPPPAAATTSSTSLPFSPDS-PGLLPNFPAPPPEGLMLSPA 660
+P +LP + Q PPA AT +LP P S PG P P L +SP
Sbjct: 770 PSPPASLPMSPL--AKPPPQAPPALATPPLQALPSPPASFPG---QAPFSPSASLPMSPL 824
Query: 661 AVPVWSAGLELSAGTEGLLEAEKGLGT-QAPHTVLRLPDPDPEGLLLG 707
A P A L+A + + T QAP R P P P+ + G
Sbjct: 825 ATPPPQAPPVLAAPLLQVPPSPPASPTLQAPR---RPPTPGPDTSVSG 869
Score = 63.9 bits (154), Expect = 5e-10
Identities = 86/364 (23%), Positives = 124/364 (34%), Gaps = 35/364 (9%)
Query: 362 TGGGGAPPPQPSPQGASETKTSLVL--DPQTGEVRLEEAQSEAPETKGAQVAAP------ 413
+ GGG P +S T S P A P+ KG Q P
Sbjct: 229 SAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPP 288
Query: 414 ----GPALGEEVLGPLAQVVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLSPT 469
PALG PLA P P P+PP A P +P SPP P L+P
Sbjct: 289 RKDAAPALGPLSSSPLA--TPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPP 346
Query: 470 SPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQ 529
S P P+ Q + P A P Q + P++ + + + +LQ
Sbjct: 347 S-----PSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSLQ 401
Query: 530 LPSATAPGNFLLANPVSGSPIVTG------VAVQQGKIILTATFPTSMLVSQVLPPAPGL 583
P + + L A GSP + ++ +Q + LT+ + P L
Sbjct: 402 APPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPASTPPDSPPLQAPL 461
Query: 584 ALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGL 643
+LP P S+ P++ + AL +L++ P A SS +P L
Sbjct: 462 SLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSP---QAPLSSLIMPPLETQSSL 518
Query: 644 LPNFPAPPPEGLMLSP-------AAVPVWSAGLELSAGTEGLLEAEKGLGTQAPHTVLRL 696
P PP L P A P+ +A L+ QAP + L
Sbjct: 519 APPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTT 578
Query: 697 PDPD 700
P P+
Sbjct: 579 PPPE 582
Score = 55.5 bits (132), Expect = 2e-07
Identities = 117/461 (25%), Positives = 160/461 (34%), Gaps = 97/461 (21%)
Query: 290 GAAPVSAEAAAQGSIFLAGTGPPAPCP--ASSSILVNGSFLAASGSPAVLLNGGPVIING 347
GAA + A A G + G P P P +++ V G+ A P GG I G
Sbjct: 11 GAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGG---IGG 67
Query: 348 LALGEASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKG 407
+ E+ AP P+ + ++ P +G E A T
Sbjct: 68 ATIPES-------------APRAGPTRSAGTSSRNPASRPPASGR---GERAPPAKNTSP 111
Query: 408 AQVAAPGPALGEEVLGPLAQ----------VVPGPPTAA--------------TFPLPPG 443
V++PG A G GPL Q V G T A + P P
Sbjct: 112 GPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPTPGT 171
Query: 444 PVPAVA---------------APQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLP 488
P PA+A AP P P G +S S P+ P
Sbjct: 172 PSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSAS---EHSTTEPSPAARRRP 228
Query: 489 QAVGPLQLLA----AGPGSPVKVAAAAGP-------ANVHLIN-SGVGVTALQLPSATAP 536
A G LQ A + +P+ A +GP A H G+ AL+ P T P
Sbjct: 229 SAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPP 288
Query: 537 GNFL--LANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLA--LPLKPETA 592
P+S SP+ T + + + LPP+P LA LPL P +
Sbjct: 289 RKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLATPLPLAPPSP 348
Query: 593 ISVPEGGLPVAPS-PALPEAHALGTLSA--QQPPPAAATTSSTSLPFSPDSPGLLPNFPA 649
+ P L PS PA P + A +++ Q PP+ T +P S SP L A
Sbjct: 349 SAPP--SLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPIQVPHSLTSPSL----QA 402
Query: 650 PPPEGLMLSPAAVPVWSAGLELSAGTEGLLEAEKGLGTQAP 690
PP SP A+ A L + T L+A T +P
Sbjct: 403 PP------SPLALSSLQATTSLGSPT---LQATHSFLTMSP 434
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 66.6 bits (161), Expect = 8e-11
Identities = 118/453 (26%), Positives = 161/453 (35%), Gaps = 52/453 (11%)
Query: 272 GNPTTEDESSRSPED-----LERGA--APVSAEAAAQGSIFLAGTGPP--APC-PASSSI 321
G PTT + SP+ +GA P + + +G + T PP AP PA++
Sbjct: 1124 GAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGGL---ATPPPKGAPTTPAATPP 1180
Query: 322 LVNGSFLAAS--GSPAVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQ-----PSP 374
G S G+P P GLA T P P+ PSP
Sbjct: 1181 SPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPT---TPAATPPSPKGGLATPSP 1237
Query: 375 QGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQV--AAPGPALGEEVLGPLAQVVPGP 432
+GA T + P+ G P KGA AA P+L + P + P P
Sbjct: 1238 KGAPTTPAATPPSPKGGPA--------TPPPKGAPTPPAATPPSLKGGLATPPHKGAPNP 1289
Query: 433 PTAATFPLPPGPVPAVAAPQVVPLSPP--PGYPTGLSPTSPLLNLPQVVPTSQVVTLPQA 490
A P P PA + P+ P P P P G T P P+ PT VT P
Sbjct: 1290 --AVVTPPSPKGGPATSPPKGAPTPPAATPPSPKGSPGTPP----PKGAPTPPAVTPPSP 1343
Query: 491 VGPLQLLAAGP---GSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFLLANPVSG 547
G L A P G P ++ GP S G A+ PS
Sbjct: 1344 KGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPT 1403
Query: 548 SPIVTGVAVQQGKII-LTATFPTSMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSP 606
SP V ++ ++ +T + + PPA + LK A S P+GG S
Sbjct: 1404 SPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAV-TPVSLKKAPATSAPKGGPATPSSK 1462
Query: 607 ALPEAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGLL--PNFPAPPPEGLMLSPAAVPV 664
P A+ S ++PP +S+S +P +P + P PA P SP VP
Sbjct: 1463 GDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPS----SPKEVPA 1518
Query: 665 WSAGLELSAGTEGLLEAEKGLGTQAPHTVLRLP 697
+ L ++K T AP L P
Sbjct: 1519 TPSSRRDPIAPTATLLSKKTPATLAPKEALIPP 1551
Score = 65.5 bits (158), Expect = 2e-10
Identities = 114/457 (24%), Positives = 169/457 (36%), Gaps = 75/457 (16%)
Query: 227 TPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTGAGGGAPCKSESDGNPTTEDESSRSPED 286
TP + AT + LT + + ++ T A G P S G+PT + SP++
Sbjct: 1418 TPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKE 1477
Query: 287 ------LERGAAPVSAEA--AAQGSIFLAGTGPPAP--CPASSSI----LVNGSFLAASG 332
+ ++P A A A G+ L P +P PA+ S + + L +
Sbjct: 1478 PPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKK 1537
Query: 333 SPAVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLDPQTGE 392
+PA L + + + P + P P+P+ A T +S
Sbjct: 1538 TPATLAP------------KEALIPPAMTVPSPKKTPAIPTPKEAPATPSS--------- 1576
Query: 393 VRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATFP--LPPGPV--PAV 448
+EA S T AP P +E+L P A P P A T P PP P PA
Sbjct: 1577 ---KEASSPPAVTPSTYKGAPSP---KELLIPPAVTSPSPKEAPTPPAVTPPSPEKGPAT 1630
Query: 449 AAPQVVPLSPPPGYPTGL--SPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVK 506
AP+ P SPP P+ L SPTS P V T+PQA L GP + +
Sbjct: 1631 PAPKGTPTSPPV-TPSSLKDSPTS-----PASVTCKMGATVPQASKGLP-AKKGPTALKE 1683
Query: 507 VAAAAGPANVHLINSGVGV-TALQLPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILTA 565
V A P + +I + + SAT+P P+ P + +G + A
Sbjct: 1684 VLVAPAPESTPIITAPTRKGPQTKKSSATSP-------PICPDPSAKNGS--KGPLSTVA 1734
Query: 566 TFPTSMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSPA-----LPEAHALGTLSAQ 620
P + A G P+ ++ PE + A LP+ + +A
Sbjct: 1735 PAPLLPVQKDSSKTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAP 1794
Query: 621 QPP------PAAATTSSTSLPFSPDSPGLLPNFPAPP 651
PP P+ T F P SPGL+ P+ P
Sbjct: 1795 SPPVSLPLAPSPVPTLPPKQQFLPSSPGLVLESPSKP 1831
Score = 63.5 bits (153), Expect = 7e-10
Identities = 106/405 (26%), Positives = 144/405 (35%), Gaps = 61/405 (15%)
Query: 283 SPEDLERGAAPVSAEAAAQGSI-FLAGTGPPAPCPASSSILVNGSFLAASGSPAVLLNGG 341
SP++ + SA A+++G++ +LA + P S + ++G + N
Sbjct: 766 SPKECPTEDSGASATASSKGTLTYLADSPSPLGVSVSPQTKRPPTKKGSAGPDTPIGN-- 823
Query: 342 PVIINGLALGEASSL--GPLLLTGGGGAP-----PPQPSPQGASETKTSLVLDPQTGEVR 394
+ + ++ EAS L L G +P P PSP+GA L P+ V
Sbjct: 824 --LSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKG--VT 879
Query: 395 LEEAQSEAPETKGAQVAAPGPALGEEVLGP-LAQVVPGPPTAATFPLPPGPVPAVAAPQV 453
L ++ P GPA P L+ P A P P G +PA +P+
Sbjct: 880 LPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKARATPAPKG-IPASPSPKG 938
Query: 454 VPLSPP--PGYPTGLSPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAA 511
P P P P G P +P P+ PT T P G GP +P A
Sbjct: 939 APTPPAATPPSPKG-GPATPS---PKWAPTPPAATPPSPKG-------GPATPSPKGAPT 987
Query: 512 GPANVHLINSGVGVTALQLPSATAPGNFLLANPVS--GSPIVTGVAVQQGKIILTATFPT 569
PA G T + T P P S GSP T +G A P
Sbjct: 988 PPAATPPSPKGGPATPSPKGAPTPPA----VTPPSPKGSPAAT--PFPKGASTPPAATPP 1041
Query: 570 SMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQPPPAAATT 629
S S P P A P P + P+GG PA P +L PPAA
Sbjct: 1042 SPKGSPAATPLPKGA-PTTPAATLPSPKGG------PATP------SLKGAPTPPAATPP 1088
Query: 630 SSTSLPFSPD------SPGLLPNFP-----APPPEGLMLSPAAVP 663
S P +P P P P PP +G +PAA P
Sbjct: 1089 SPKGGPATPSPKGAPMPPAATPPSPKGGLATPPHKGAPTTPAATP 1133
Score = 55.5 bits (132), Expect = 2e-07
Identities = 100/432 (23%), Positives = 146/432 (33%), Gaps = 63/432 (14%)
Query: 310 GPPAPCPASSSILVNGSFLA----ASGSPAVLL----NGGPVIINGLALGEASSLGPLLL 361
G P P PA++ + G + +PAV+ GGP + P
Sbjct: 1262 GAPTP-PAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPKGAPTPPAATPPSP 1320
Query: 362 TGGGGAPPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEV 421
G G PPP+ +P + T S P + P T ++ PA
Sbjct: 1321 KGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATT--PSSKGGPTTPSSKEGPTPPAATPSH 1378
Query: 422 LGPLAQVVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLSPTSPLLNLPQVVPT 481
G A P P P P G +P V+PLSP +P +P+ P+
Sbjct: 1379 KGGPAMTPPSPKRGPAIPSPKGDP---TSPAVIPLSPKK------APATPVTREGAATPS 1429
Query: 482 SQVVTLPQAVGPLQLLAA--------GPGSPVKVAAAAGPANVHLINSGVGVTALQLPSA 533
+T P AV P+ L A GP +P PA V + Q+ ++
Sbjct: 1430 KGDLT-PPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPA-VTPPSPKEPPAPKQVATS 1487
Query: 534 TAPGNFLLANPVSGSPIVTGVAVQQGKIILTATF-------PTSMLVSQVLPPAPGLALP 586
++P G+P + V K + PT+ L+S+ P
Sbjct: 1488 SSPKKAPATPAPMGAPTLPAVIPSSPKEVPATPSSRRDPIAPTATLLSKKTPAT------ 1541
Query: 587 LKPETAISVPEGGLPVAP-SPALP---EAHALGTLSAQQPPPAAATTSSTSLPFSPDSPG 642
L P+ A+ P +P +PA+P EA A + PPA ++ P SP
Sbjct: 1542 LAPKEALIPPAMTVPSPKKTPAIPTPKEAPATPSSKEASSPPAVTPSTYKGAP-SPKELL 1600
Query: 643 LLPNFPAPPPEGLMLSPAAVPVWSAGLELSAGTEGLLEAEKGLGTQAPHTVLRLPDPDPE 702
+ P +P P+ PA P EKG T AP P P
Sbjct: 1601 IPPAVTSPSPKEAPTPPAVTPP---------------SPEKGPATPAPKGTPTSPPVTPS 1645
Query: 703 GLLLGATAGGEV 714
L T+ V
Sbjct: 1646 SLKDSPTSPASV 1657
Score = 52.0 bits (123), Expect = 2e-06
Identities = 66/253 (26%), Positives = 98/253 (38%), Gaps = 45/253 (17%)
Query: 426 AQVVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGL--------SPTSPLLNLPQ 477
A P P T A+ PL P P ++ +PL P PT L SP + L P
Sbjct: 64 ASPFPSPSTIASTPLEV-PFPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAALALASPM 122
Query: 478 VVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAA-----AAGPANVHLINSGVGVTALQLPS 532
+ PT + P + PL L+A P S K +A P +V + SG +T
Sbjct: 123 IAPTLKGT--PSSSAPLALVALAPHSVQKSSAFPPNLLTSPPSVAVAESGSVIT------ 174
Query: 533 ATAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPETA 592
L+ P++ S T + +++ S PP +P T
Sbjct: 175 --------LSAPIAPSEPKTNLNKVPSEVVPNPKGTPS-------PPCIVSTVPYHCVTP 219
Query: 593 ISVPEGGLPVAPSPALPEAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGLLP-NFPAPP 651
++ + G+ +LP+ TL+ P T SS + SP +PG L P P
Sbjct: 220 MASIQSGVA-----SLPQTTPTTTLAIASPQVKDTTISSVLI--SPQNPGSLSLKGPVSP 272
Query: 652 PEGLMLSPAAVPV 664
P L LS ++PV
Sbjct: 273 PAALSLSTQSLPV 285
Score = 52.0 bits (123), Expect = 2e-06
Identities = 94/358 (26%), Positives = 121/358 (33%), Gaps = 49/358 (13%)
Query: 311 PPAPCPASSSILVNGSFLAASGSPAVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPP 370
PPA P + + S +A A P +G A ASS G L
Sbjct: 740 PPAGTPPGTKKVDGISHTSALAPVASSPKECPTEDSG-ASATASSKGTLTYLADS----- 793
Query: 371 QPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLAQVVP 430
PSP G S + PQT ++ S P+T +++P + L +
Sbjct: 794 -PSPLGVS-------VSPQTKRPPTKKG-SAGPDTPIGNLSSPVSPVEASFLPENSLSFQ 844
Query: 431 GP---PTAATFPLPPGPVPAVAAPQVVPLSPPP-GYPTGLSPTSPLLNLPQVVPTSQVVT 486
G P P PP P A V PLSP P +PT ++NLP P T
Sbjct: 845 GSKDSPATTHSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLP--FPKEGPAT 902
Query: 487 LPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFLLANPVS 546
P L+ SP K A P + S G A P+AT P P +
Sbjct: 903 PAPKQAPA--LSMTSSSPKKARATPAPKGIPASPSPKG--APTPPAATPPSP--KGGPAT 956
Query: 547 GSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSP 606
SP A P S P G P P P+GG P
Sbjct: 957 PSPKWAPTP--------PAATPPSPKGGPATPSPKGAPTP--PAATPPSPKGG------P 1000
Query: 607 ALPEAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGLLPNFPAPPPEGLMLSPAAVPV 664
A P T A PP + ++T P +P P P P+G SPAA P+
Sbjct: 1001 ATPSPKGAPTPPAVTPPSPKGSPAATPFPKGASTP---PAATPPSPKG---SPAATPL 1052
Score = 47.8 bits (112), Expect = 4e-05
Identities = 104/444 (23%), Positives = 140/444 (31%), Gaps = 69/444 (15%)
Query: 311 PPAPCPAS-----SSILVNGSFLAASGSPAVLLNGGPVIINGLALGEASSLGPLLLTGGG 365
PP P P SS+LV + L G P + G + P +L
Sbjct: 507 PPLPDPEDLKNLPSSVLVKFPTQKDLQTVPASLEGAP--FSPAQAGLTTKKDPTVLPLVQ 564
Query: 366 GAPPPQPSPQGASETKTSLVLDPQTGEVRLEEAQ------------SEAPETKGAQVAAP 413
AP PS Q S + + L P+ + + S A V
Sbjct: 565 AAPKNSPSFQSTSSSP-EIPLSPEATLAKKSLGEPLPIGKPASSMTSPLGVNSSASVIKT 623
Query: 414 GPALGEEVLGPLAQVVPGPPTAATFPL----PPGPVPAVA---APQVVPLSP-------- 458
G + GPL + PT A FPL P G P A + SP
Sbjct: 624 DSYAGPDSAGPLLKSSLITPTVAAFPLESADPAGVAPTTAKGTSTYTTTASPFLEGTVSL 683
Query: 459 -PPGYPTGLSPTSPLLNLPQVVPTSQVVTLPQ-AVGPLQLLAAGPGSPVKVAA-----AA 511
P +P + L +P V PQ PL L P P V + A
Sbjct: 684 APKNHPVKEGTLTTLPLVPTASENCPVAPSPQNTCAPLATLVLAPEIPKSVPSPSLPPAG 743
Query: 512 GPANVHLINSGVGVTALQLPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSM 571
P ++ G+ T+ P A++P P S + A +G + A P+ +
Sbjct: 744 TPPGTKKVD-GISHTSALAPVASSPKEC----PTEDSG-ASATASSKGTLTYLADSPSPL 797
Query: 572 LVSQVLP----------------PAPGLALPLKPETAISVPEGGLPVAPSPALPEAHALG 615
VS V P P L+ P+ P A +PE L S P
Sbjct: 798 GVS-VSPQTKRPPTKKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPAT---- 852
Query: 616 TLSAQQPPPAAATTSSTSLPFSPDSPGLLPNFPAPPPEGLMLSPAAVPVWSAGLELSAGT 675
T S P P A T S P SP L P P + P P A + A +
Sbjct: 853 THSPTPPSPKGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALS 912
Query: 676 EGLLEAEKGLGTQAPHTVLRLPDP 699
+K T AP + P P
Sbjct: 913 MTSSSPKKARATPAPKGIPASPSP 936
Score = 46.2 bits (108), Expect = 1e-04
Identities = 77/317 (24%), Positives = 114/317 (35%), Gaps = 56/317 (17%)
Query: 348 LALGEASSLGPLLLTGGGGAPPP-QPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETK 406
L + A S+ L G PPP P+PQ + L A +P
Sbjct: 26 LPMSSALSVTAALGQPGPTLPPPCSPAPQ----------------QCPLSAANQASPFPS 69
Query: 407 GAQVAA-----PGPALGEEVLGPLAQVVPGP---PTAATFPLPPGPVPAVAAPQVVPLSP 458
+ +A+ P P PL P P P+ P + A+A+P + P
Sbjct: 70 PSTIASTPLEVPFPQSSSGTALPLGTAPEAPTFLPNLIGPPISPAAL-ALASPMIAPTLK 128
Query: 459 PPGYPTGLSPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHL 518
G P+ +P + + P V S P + A GS + ++A P+
Sbjct: 129 --GTPSSSAPLALVALAPHSVQKSSAFPPNLLTSPPSVAVAESGSVITLSAPIAPSEPKT 186
Query: 519 INSGVGVTALQLPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLP 578
+ V + P T P + + V + ++Q G L T PT+ L
Sbjct: 187 NLNKVPSEVVPNPKGT-PSPPCIVSTVPYHCVTPMASIQSGVASLPQTTPTTTL------ 239
Query: 579 PAPGLALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQP--PPAAATTSSTSLPF 636
+A P +T IS V SP P G+LS + P PPAA + S+ SLP
Sbjct: 240 ---AIASPQVKDTTIS------SVLISPQNP-----GSLSLKGPVSPPAALSLSTQSLPV 285
Query: 637 SPDS-----PGLLPNFP 648
S P P+FP
Sbjct: 286 VTSSQKTAGPNTPPDFP 302
Score = 40.4 bits (93), Expect = 0.006
Identities = 95/401 (23%), Positives = 146/401 (36%), Gaps = 50/401 (12%)
Query: 283 SPEDLERGAAPVSAEAAAQGSIFLAGTGPPAPCPASSSILVNGSFLAASGSPAVLLNGGP 342
SP+ + + V GS+ L G P PA+ S+ + S GP
Sbjct: 243 SPQVKDTTISSVLISPQNPGSLSLKG---PVSPPAALSLSTQSLPVVTSSQKTA----GP 295
Query: 343 VIINGLALGEASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEA 402
+ S L PL + G S Q +T S + DP + ++ + + A
Sbjct: 296 NTPPDFPISLGSHLAPLHQSSFG-------SVQLLGQTGPSALSDPTVKTISVDHSSTGA 348
Query: 403 PETKGAQVAAPGPALGEEVLGPLA-------QVVPGPPTAATFPLPPGPVPAVAAPQVVP 455
V P P+ E V +A V GP T ++ P VA
Sbjct: 349 SYPSQRSVIPPLPSRNEVVPATVAAFPVVAPSVDKGPSTISSITCSPSGSLNVATS--FS 406
Query: 456 LSPPPGYPTGLSPTSPLLNLPQV--VPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGP 513
LSP SP + + P V +P S V T P V +AA P + +VA P
Sbjct: 407 LSPTTSLILKSSPNATY-HYPLVAQMPVSSVGTTPLVVTNPCTIAAAPTTTFEVATCVSP 465
Query: 514 ANVHLINSGVGVTALQLPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLV 573
++SG + T+P ++A PV+ T VA +I ++ P +
Sbjct: 466 P----MSSG----PISNIEPTSPAALVMA-PVAPKEPSTQVATTL-RIPVSPPLPDPEDL 515
Query: 574 SQVLPPAPGLALPLKPETAISVPEG--GLPVAPSPA------LPEAHALGTLSAQQPPPA 625
LP + + P + + +VP G P +P+ A P L + + P
Sbjct: 516 KN-LPSSVLVKFPTQKDLQ-TVPASLEGAPFSPAQAGLTTKKDPTVLPLVQAAPKNSPSF 573
Query: 626 AATTSSTSLPFSPDS----PGLLPNFPAPPPEGLMLSPAAV 662
+T+SS +P SP++ L P P M SP V
Sbjct: 574 QSTSSSPEIPLSPEATLAKKSLGEPLPIGKPASSMTSPLGV 614
Score = 37.7 bits (86), Expect = 0.039
Identities = 40/141 (28%), Positives = 59/141 (41%), Gaps = 25/141 (17%)
Query: 568 PTSMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQPPPAAA 627
P + VLP + L++ A+ P LP SPA P+ L + P P+ +
Sbjct: 17 PQPQAETAVLPMSSALSVT----AALGQPGPTLPPPCSPA-PQQCPLSAANQASPFPSPS 71
Query: 628 TTSSTSL--PF-------------SPDSPGLLPNFPAPPPEGLMLSPAAVPVWSAGLELS 672
T +ST L PF +P++P LPN PP +SPAA+ + S + +
Sbjct: 72 TIASTPLEVPFPQSSSGTALPLGTAPEAPTFLPNLIGPP-----ISPAALALASPMIAPT 126
Query: 673 AGTEGLLEAEKGLGTQAPHTV 693
A L APH+V
Sbjct: 127 LKGTPSSSAPLALVALAPHSV 147
Score = 37.7 bits (86), Expect = 0.039
Identities = 66/268 (24%), Positives = 93/268 (34%), Gaps = 34/268 (12%)
Query: 265 PCKSESDGNPTTEDESSRSPEDLERGAAPVSAEAAA---QGSIFL-AGTGPPA------- 313
P G PT+ + S +D A V+ + A Q S L A GP A
Sbjct: 1628 PATPAPKGTPTSPPVTPSSLKDSPTSPASVTCKMGATVPQASKGLPAKKGPTALKEVLVA 1687
Query: 314 PCPASSSILV----NGSFLAASGSPAVLLNGGPVIINGLALGEASSLGPLLL-------- 361
P P S+ I+ G S + + + P NG + G S++ P L
Sbjct: 1688 PAPESTPIITAPTRKGPQTKKSSATSPPICPDPSAKNG-SKGPLSTVAPAPLLPVQKDSS 1746
Query: 362 --TGGGGAPPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSE----APETKGAQVAAPGP 415
G A P E+K S L E L + +S AP + AP P
Sbjct: 1747 KTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASVSAAPSPPVSLPLAPSP 1806
Query: 416 ALGEEVLGPLAQVVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLSPTSPLLNL 475
L P Q +P P P P+ +++PL PP G+ S L+N+
Sbjct: 1807 V---PTLPPKQQFLPSSP-GLVLESPSKPLAPADEDELLPLIPPEPISGGVPFQSVLVNM 1862
Query: 476 PQVVPTSQVVTLPQAVGPLQLLAAGPGS 503
P V P A P+ G G+
Sbjct: 1863 PTPKSAGIPVPTPSAKQPVTKNNKGSGT 1890
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 66.2 bits (160), Expect = 1e-10
Identities = 128/471 (27%), Positives = 176/471 (37%), Gaps = 111/471 (23%)
Query: 280 SSRSPEDLERGAAPVSAEAAAQGSIFLAGTGPPAPCPAS---SSILVNGSFLAASGSPAV 336
+S S D +G+ S ++Q S+ L AP PA S + G L S P++
Sbjct: 611 ASDSTFDSGQGSTVYSDSQSSQQSVMLGSLADAAPSPAQCVCSPPVSEGPVLPQS-LPSL 669
Query: 337 LLNGGPVIINGLALGE-----------------ASSLGPLLL-------TGGGG-APPPQ 371
P GL +G A S P+L TG G APP Q
Sbjct: 670 GAYQQPTAAPGLPVGSVPAPACPPSLQQHFPDPAMSFAPVLPPPSTPMPTGPGQPAPPGQ 729
Query: 372 PSPQGASETKTSLVLDPQTGEVRLEEAQSEAPE--TKGAQVAAPGPA----LGEEVLGPL 425
P A T VL PQ V L+ P +QV AP + + L PL
Sbjct: 730 QPPPLAQPTPLPQVLAPQP-VVPLQPVPPHLPPYLAPASQVGAPAQLKPLQMPQAPLQPL 788
Query: 426 AQV-------------------------VPGPPTAATFPLPPGP-------VPAVAAP-- 451
AQV +P PTA P+PP +P++AAP
Sbjct: 789 AQVPPQMPPIPVVPPITPLAGIDGLPPALPDLPTATVPPVPPPQYFSPAVILPSLAAPLP 848
Query: 452 --------QVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLPQAVGPLQL---LAAG 500
Q V L PPG P + + + N P +P V P V L + +A
Sbjct: 849 PASPALPLQAVKLPHPPGAPLAMPCRTIVPNAPATIPLLAVA--PPGVAALSIHSAVAQL 906
Query: 501 PGSPV------KVAAAAGPANVHLINSGVGVTALQL---PSATAPGNFLLANP--VSGSP 549
PG PV ++A P + H + T Q P T P +L + P
Sbjct: 907 PGQPVYPAAFPQMAPTDVPPSPHHTVQNMRATPPQPALPPQPTLPPQPVLPPQPTLPPQP 966
Query: 550 IVTGVAVQQGKIILTATFPTSMLVSQ-VLPPAPGLALPLKPETAIS-VPEGGLPVA-PSP 606
++ + + +L P ML Q VLPP P ALP++PE +PE P A P
Sbjct: 967 VLPPQPTRPPQPVLP---PQPMLPPQPVLPPQP--ALPVRPEPLQPHLPEQAAPAATPGS 1021
Query: 607 AL----PEAHALGTLSAQQP----PPAAATTSSTSLPFSPDSPGLLPNFPA 649
+ P +A+ ++AQ P PPAA + P +P LLP FP+
Sbjct: 1022 QILLGHPAPYAVD-VAAQVPTVPVPPAAVLSPPLPEVLLPAAPELLPQFPS 1071
Score = 65.5 bits (158), Expect = 2e-10
Identities = 119/410 (29%), Positives = 155/410 (37%), Gaps = 96/410 (23%)
Query: 277 EDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGPPAPCPASSS--ILVNGSFLAASGSP 334
E E + + L P SA + A S F +G G + SS ++ GS A+ SP
Sbjct: 588 EPEEPEADQHLLPPTLPTSATSLASDSTFDSGQGSTVYSDSQSSQQSVMLGSLADAAPSP 647
Query: 335 AVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQPSPQ-GASETKTSLVLDPQTGEV 393
A + PV S GP+L PQ P GA + T+
Sbjct: 648 AQCVCSPPV-----------SEGPVL---------PQSLPSLGAYQQPTA---------- 677
Query: 394 RLEEAQSEAPETKGAQVAAPG--PALGEEVLGP---LAQVVPGP----PTAATFPLPPG- 443
AP V AP P+L + P A V+P P PT P PPG
Sbjct: 678 --------APGLPVGSVPAPACPPSLQQHFPDPAMSFAPVLPPPSTPMPTGPGQPAPPGQ 729
Query: 444 ---------PVPAVAAPQ-VVPLSP-PPGYPTGLSPTSPLLNLPQVVPTSQVVTLPQAVG 492
P+P V APQ VVPL P PP P L+P S + Q+ P + +PQA
Sbjct: 730 QPPPLAQPTPLPQVLAPQPVVPLQPVPPHLPPYLAPASQVGAPAQLKP----LQMPQA-- 783
Query: 493 PLQLLAAGPGS--PVKVAAAAGP-ANVHLINSGVGVTALQLPSATAPGNFLLANPVSGSP 549
PLQ LA P P+ V P A + G+ LP+AT P + P SP
Sbjct: 784 PLQPLAQVPPQMPPIPVVPPITPLAGI----DGLPPALPDLPTATVPP---VPPPQYFSP 836
Query: 550 IVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSPALP 609
V I+ + P LPPA ALPL+ P L + +P
Sbjct: 837 AV---------ILPSLAAP--------LPPASP-ALPLQAVKLPHPPGAPLAMPCRTIVP 878
Query: 610 EAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGLLPNFPAPPPEGLMLSP 659
A A L A PP AA + +++ P P FP P + SP
Sbjct: 879 NAPATIPLLAVAPPGVAALSIHSAVAQLPGQPVYPAAFPQMAPTDVPPSP 928
Score = 52.8 bits (125), Expect = 1e-06
Identities = 85/341 (24%), Positives = 112/341 (32%), Gaps = 64/341 (18%)
Query: 342 PVIINGLALGEASSLGPLLLTGGGGAPPPQPSPQGASET----KTSLVLDPQTGEVRLEE 397
PV+ L L P L PP P PQ S + L P + + L+
Sbjct: 799 PVVPPITPLAGIDGLPPALPDLPTATVPPVPPPQYFSPAVILPSLAAPLPPASPALPLQA 858
Query: 398 AQSEAPETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATFP-------LPPGPVPAVAA 450
+ P GA +A P + + + PP A LP PV A
Sbjct: 859 VK--LPHPPGAPLAMPCRTIVPNAPATIPLLAVAPPGVAALSIHSAVAQLPGQPVYPAAF 916
Query: 451 PQVVPLSPPPGY-----------------------PTGLSPTSPLLNLPQVVPTSQVVTL 487
PQ+ P PP P + P P L PQ V Q
Sbjct: 917 PQMAPTDVPPSPHHTVQNMRATPPQPALPPQPTLPPQPVLPPQPTLP-PQPVLPPQPTRP 975
Query: 488 PQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFLLANPVSG 547
PQ V P Q + P PV A P + + A P+AT LL +P
Sbjct: 976 PQPVLPPQPML--PPQPVLPPQPALPVRPEPLQPHLPEQAA--PAATPGSQILLGHP--- 1028
Query: 548 SPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSPA 607
+P VA Q + T P + ++S PP P + LP PE P
Sbjct: 1029 APYAVDVAAQ----VPTVPVPPAAVLS---PPLPEVLLPAAPELL-------------PQ 1068
Query: 608 LPEAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGLLPNFP 648
P + A + S Q P AT + P P PG+ P
Sbjct: 1069 FPSSLATVSASVQSVPTQTATLLPPANPPLPGGPGIASPCP 1109
Score = 43.1 bits (100), Expect = 0.001
Identities = 78/331 (23%), Positives = 110/331 (33%), Gaps = 64/331 (19%)
Query: 405 TKGAQVAAPGPALGEE-------------------------------------------- 420
T AQ PGP EE
Sbjct: 576 TYHAQAGQPGPPEPEEPEADQHLLPPTLPTSATSLASDSTFDSGQGSTVYSDSQSSQQSV 635
Query: 421 VLGPLAQVVPGP-PTAATFPLPPGPVPAVAAPQVVPLSPP---PGYPTGLSPTSPL-LNL 475
+LG LA P P + P+ GPV + P + P PG P G P +L
Sbjct: 636 MLGSLADAAPSPAQCVCSPPVSEGPVLPQSLPSLGAYQQPTAAPGLPVGSVPAPACPPSL 695
Query: 476 PQVVPTSQVVTLPQAVGPLQLLAAGPGSPV----KVAAAAGPANVHLINSGVGVTALQLP 531
Q P + P P + GPG P + A P + + + V LQ
Sbjct: 696 QQHFPDPAMSFAPVLPPPSTPMPTGPGQPAPPGQQPPPLAQPTPLPQVLAPQPVVPLQPV 755
Query: 532 SATAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLA-LPLKPE 590
P A+ V + + + Q + A P M V+PP LA + P
Sbjct: 756 PPHLPPYLAPASQVGAPAQLKPLQMPQAPLQPLAQVPPQMPPIPVVPPITPLAGIDGLPP 815
Query: 591 TAISVPEGGLPVAPSPA-LPEAHALGTLSAQQPPPA-AATTSSTSLPFSPDSP------G 642
+P +P P P A L +L+A PP + A + LP P +P
Sbjct: 816 ALPDLPTATVPPVPPPQYFSPAVILPSLAAPLPPASPALPLQAVKLPHPPGAPLAMPCRT 875
Query: 643 LLPNFPAPPPEGLMLSP--AAVPVWSAGLEL 671
++PN PA P + P AA+ + SA +L
Sbjct: 876 IVPNAPATIPLLAVAPPGVAALSIHSAVAQL 906
Score = 41.2 bits (95), Expect = 0.004
Identities = 43/159 (27%), Positives = 53/159 (33%), Gaps = 22/159 (13%)
Query: 360 LLTGGGGAPPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALG- 418
LL+ G + PP P + + + PQ G E +Q PG G
Sbjct: 1367 LLSQAGPSNPPGAPPAPLAPSSPPVTALPQDGAAPATSTMPEPASGTASQAGGPGTPQGL 1426
Query: 419 ---EEVLGPLAQVVPGPPTAATFPLPPGPVPAVAAPQVV----------PLSPPPGYPTG 465
E PLA+ P A PL G P AP+ PL PP P
Sbjct: 1427 TSELETSQPLAETHEAP--LAVQPLVVGLAPCTPAPEAASTRDASAPREPLPPPAPEP-- 1482
Query: 466 LSPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSP 504
SP PQ LP AVG + L + SP
Sbjct: 1483 ----SPHSGTPQPALGQPAPLLPAAVGAVSLATSQLPSP 1517
Score = 38.5 bits (88), Expect = 0.023
Identities = 50/203 (24%), Positives = 70/203 (34%), Gaps = 34/203 (16%)
Query: 452 QVVPLSPPPGYPTGLSPTSPLLN-LPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAA 510
Q P +PP P L+P+SP + LPQ T+P+ A GPG+P
Sbjct: 1370 QAGPSNPPGAPPAPLAPSSPPVTALPQDGAAPATSTMPEPASGTASQAGGPGTPQ----- 1424
Query: 511 AGPANVHLINSGVGVTA-LQLPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPT 569
G+T+ L+ A + P++ P+V G+A +T
Sbjct: 1425 -------------GLTSELETSQPLAETH---EAPLAVQPLVVGLAPCTPAPEAASTRDA 1468
Query: 570 SMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQPPPAAATT 629
S + PPAP + P + P G P PA A +L T PP
Sbjct: 1469 SAPREPLPPPAPEPS----PHSGTPQPALGQPAPLLPAAVGAVSLATSQLPSPPLGPTVP 1524
Query: 630 SSTSLPFSPDSPGLLPNFPAPPP 652
D G PPP
Sbjct: 1525 PQPPSALESDGEG-------PPP 1540
Score = 32.3 bits (72), Expect = 1.6
Identities = 43/143 (30%), Positives = 51/143 (35%), Gaps = 13/143 (9%)
Query: 529 QLPSATAPGNFLLANPVS---GSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLAL 585
QL S P N A P SP VT + Q G T+T P + PG
Sbjct: 1366 QLLSQAGPSNPPGAPPAPLAPSSPPVTALP-QDGAAPATSTMPEPASGTASQAGGPGTPQ 1424
Query: 586 PLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQPPPAAATTSSTSLP---FSPDSPG 642
L E S P AP P L + P P AA+T S P P +P
Sbjct: 1425 GLTSELETSQPLAETHEAPLAVQPLVVGLAPCT---PAPEAASTRDASAPREPLPPPAPE 1481
Query: 643 LLPNFPAPPP---EGLMLSPAAV 662
P+ P P + L PAAV
Sbjct: 1482 PSPHSGTPQPALGQPAPLLPAAV 1504
Score = 32.0 bits (71), Expect = 2.1
Identities = 37/135 (27%), Positives = 51/135 (37%), Gaps = 30/135 (22%)
Query: 369 PPQPS--PQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLA 426
PPQP PQ + +L + P+ + L E Q+ T G+Q+ PA +
Sbjct: 981 PPQPMLPPQPVLPPQPALPVRPEPLQPHLPE-QAAPAATPGSQILLGHPAPYAVDVAAQV 1039
Query: 427 QVVPGPPTAATFP------LPPGP-------------------VPAVAAPQVVPLSPP-P 460
VP PP A P LP P VP A + P +PP P
Sbjct: 1040 PTVPVPPAAVLSPPLPEVLLPAAPELLPQFPSSLATVSASVQSVPTQTATLLPPANPPLP 1099
Query: 461 GYPTGLSPTSPLLNL 475
G P G++ P + L
Sbjct: 1100 GGP-GIASPCPTVQL 1113
Score = 30.4 bits (67), Expect = 6.2
Identities = 17/49 (34%), Positives = 21/49 (42%)
Query: 48 AAAGAGAGAAAAGAEGPGSPGVPGSPPEAASEPPTGLRFSPEQVACVCE 96
A G AA A A PG PG+P +A EP P+ +A E
Sbjct: 86 AERARGRPAAPAPAALVAQPGAPGAPADAGPEPVGTQEPGPDPIAAAVE 134
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 65.5 bits (158), Expect = 2e-10
Identities = 95/371 (25%), Positives = 127/371 (34%), Gaps = 37/371 (9%)
Query: 331 SGSPAVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLDPQT 390
SGSPA GP A G A P GG P +P P P
Sbjct: 64 SGSPAGAAGAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPA 123
Query: 391 GEVRLE---EAQSEAPETKGAQVAA-PGPALGEEVLGPLAQVVPGPPTAATFPLPPGPVP 446
++R A S AP A VAA P PA P P P A PGP P
Sbjct: 124 AKLRPPPEGSAGSCAPVPAAAAVAAGPEPA-------PAGPAKPAGPAALAARAGPGPGP 176
Query: 447 AVAAPQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVK 506
P P P PG P G L ++ + A + L+ GP + +
Sbjct: 177 ---GPGPGP-GPGPGKPAGPGAAQTLNGSAALLNSHHA-----AAPAVSLVNNGPAALLP 227
Query: 507 VAAAAGPANVHLINSGVGVTALQLPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILTAT 566
+ A P V VG A P+A +P P + +P A
Sbjct: 228 LPKPAAPGTVIQTPPFVGAAAPPAPAAPSP-------PAAPAPAAPAAAPPP-----PPP 275
Query: 567 FPTSMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQPPPAA 626
P ++ P P A P P A + G AP+PA P A +S Q P AA
Sbjct: 276 APATLARPPGHPAGPPTAAPAVPPPAAAQNGGSAGAAPAPA-PAAGGPAGVSGQPGPGAA 334
Query: 627 ATTSSTSLPFSPDSPGLLPNFPAPPPEGLMLSPAAVPVWSAGLELSAGTEGLLEAEKGLG 686
A + + +SP + A PP L+ + +A + + +G L + +
Sbjct: 335 AAAPAPGV--KAESPKRV--VQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVP 390
Query: 687 TQAPHTVLRLP 697
AP T LP
Sbjct: 391 PPAPGTPTGLP 401
Score = 64.7 bits (156), Expect = 3e-10
Identities = 103/424 (24%), Positives = 139/424 (32%), Gaps = 70/424 (16%)
Query: 259 GAGGGAPCKSESDGNPTTEDESSRSPEDLERGAAPVS-AEAAAQGSIFLAGTGPPA---- 313
GA G P + ++G P E + G P + + + AG PPA
Sbjct: 69 GAAGAGPA-APAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLR 127
Query: 314 PCPASSSILVNGSFLAASGSPAVLLNGGPVIINGLALGEASSLGPLLLT-------GGGG 366
P P S+ GS + AV P G A GP L G G
Sbjct: 128 PPPEGSA----GSCAPVPAAAAVAAGPEPA-----PAGPAKPAGPAALAARAGPGPGPGP 178
Query: 367 APPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAA----PGPALGEEVL 422
P P P P + + L+ + A + A AA P PA V+
Sbjct: 179 GPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLPLPKPAAPGTVI 238
Query: 423 ---------GPLAQVVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLSPTSPLL 473
P A P PP AA P P P P L+ PPG+P G +P +
Sbjct: 239 QTPPFVGAAAPPAPAAPSPP-AAPAPAAPAAAPPPPPPAPATLARPPGHPAGPPTAAPAV 297
Query: 474 NLPQVVPTSQVVTLPQAVGPLQLLAAGP----GSPVKVAAAAGPANVHLINSGVGVTALQ 529
P A P A GP G P AAAA PA GV + +
Sbjct: 298 PPPAAAQNGGSAGAAPAPAP---AAGGPAGVSGQPGPGAAAAAPA------PGVKAESPK 348
Query: 530 LPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALPLKP 589
AP P + + +G A +++ T ++ P+P P P
Sbjct: 349 RVVQAAP-------PAAQTLAASGPASTAASMVIGPTMQGAL-------PSPAAVPPPAP 394
Query: 590 ETAISVPEG--GLPVAPSPALPEAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGLLPNF 647
T +P+G G P A G + P T + LP P +P + NF
Sbjct: 395 GTPTGLPKGAAGAVTQSLSRTPTATTSGIRATLTP-----TVLAPRLPQPPQNPTNIQNF 449
Query: 648 PAPP 651
PP
Sbjct: 450 QLPP 453
Score = 60.8 bits (146), Expect = 4e-09
Identities = 103/424 (24%), Positives = 149/424 (35%), Gaps = 53/424 (12%)
Query: 257 RTGAGGGAPCKSESDGNPTTEDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGP----P 312
R G G G P G + + + L AA +++ AA ++ L GP P
Sbjct: 169 RAGPGPG-PGPGPGPGPGPGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALLP 227
Query: 313 APCPAS-SSILVNGSFLAASGSPAVLLNGGPVIINGLALGEASSLGP-----LLLTGGGG 366
P PA+ +++ F+ A+ PA P A A P L G
Sbjct: 228 LPKPAAPGTVIQTPPFVGAAAPPAPAAPSPPAAPAPAAPAAAPPPPPPAPATLARPPGHP 287
Query: 367 APPPQPSPQ----GASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVL 422
A PP +P A++ S P A GA AAP P + E
Sbjct: 288 AGPPTAAPAVPPPAAAQNGGSAGAAPAPAPAAGGPAGVSGQPGPGAAAAAPAPGVKAESP 347
Query: 423 GPLAQVVP---------GPP-TAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGL------ 466
+ Q P GP TAA+ + P A+ +P VP P PG PTGL
Sbjct: 348 KRVVQAAPPAAQTLAASGPASTAASMVIGPTMQGALPSPAAVP-PPAPGTPTGLPKGAAG 406
Query: 467 SPTSPLLNLPQVVPTSQVVTL-PQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVG- 524
+ T L P + TL P + P L P +P + P + L+ S G
Sbjct: 407 AVTQSLSRTPTATTSGIRATLTPTVLAPR--LPQPPQNPTNIQNFQLPPGMVLVRSENGQ 464
Query: 525 --------VTALQLPSATAPGNFLL---ANPVSGSPIVTGVAVQQGKIILTATFPTSMLV 573
+ +Q + P + A P S P+ G I+ + ++
Sbjct: 465 LLMIPQQALAQMQAQAHAQPQTTMAPRPATPTSAPPVQISTVQAPGTPIIARQVTPTTII 524
Query: 574 SQVLPPA----PGLALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQPPPAAATT 629
QV P L P + GG A + +L A A+ T + Q+ P A TT
Sbjct: 525 KQVSQAQTTVQPSATLQRSPGVQPQLVLGG--AAQTASLGTATAVQTGTPQRTVPGATTT 582
Query: 630 SSTS 633
SS +
Sbjct: 583 SSAA 586
Score = 47.0 bits (110), Expect = 6e-05
Identities = 80/283 (28%), Positives = 100/283 (35%), Gaps = 67/283 (23%)
Query: 402 APETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPG 461
AP T + AA G ALG V V G P A P P A AP P PP G
Sbjct: 44 APRTPEVRAAAAG-ALGNHV-------VSGSPAGAAGAGPAAP--AEGAPGAAPEPPPAG 93
Query: 462 Y----------PTGLSPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAA- 510
P SP PL+ P +++ P+ +AG +PV AAA
Sbjct: 94 RARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKLRPPPEG-------SAGSCAPVPAAAAV 146
Query: 511 --------AGPANVHLINSGVGVTALQLPSATAPGNFLLANPVSGSPIVTGVAVQQGKII 562
AGPA +G A + PG P G P G A
Sbjct: 147 AAGPEPAPAGPAKP----AGPAALAARAGPGPGPGPGPGPGPGPGKPAGPGAA------- 195
Query: 563 LTATFPTSMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQP 622
++ S L + A P A+S+ G P A P LP+ A GT+ P
Sbjct: 196 ------QTLNGSAALLNSHHAAAP-----AVSLVNNG-PAALLP-LPKPAAPGTVIQTPP 242
Query: 623 ------PPAAATTSSTSLPFSPDSPGLLPNFPAPPPEGLMLSP 659
PPA A S + P +P +P P P P P L P
Sbjct: 243 FVGAAAPPAPAAPSPPAAP-APAAPAAAPPPPPPAPATLARPP 284
Score = 35.4 bits (80), Expect = 0.19
Identities = 32/103 (31%), Positives = 37/103 (35%), Gaps = 5/103 (4%)
Query: 5 PAEPSAGPAAGGEAVAAAAATEEEEEEARQLLQTLQAAEGEAAAAAGAGAGAAAAGAEGP 64
P E SAG A A AA AA E A AA AG G G GP
Sbjct: 129 PPEGSAGSCAPVPAAAAVAAGPEPAPAG----PAKPAGPAALAARAGPGPGPGPGPGPGP 184
Query: 65 GSPGVPGSPPEAASEPPTGLRFSPEQVACVCEALLQAGHAGRL 107
G PG P P A + + + A +L+ G A L
Sbjct: 185 G-PGKPAGPGAAQTLNGSAALLNSHHAAAPAVSLVNNGPAALL 226
Score = 32.3 bits (72), Expect = 1.6
Identities = 41/136 (30%), Positives = 49/136 (36%), Gaps = 25/136 (18%)
Query: 2 ATLPAEPSAGPAAGGEAVAAAAATEEEEEEARQLLQTLQAAEGEAAAAAGAGAGAAAAGA 61
A PA P+A P A A A A AAA G AGAA A A
Sbjct: 260 APAPAAPAAAPPPPPPAPATLARPPGHPAGPPT---AAPAVPPPAAAQNGGSAGAAPAPA 316
Query: 62 EGPGSP----GVPGSPPEAASEPPTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPA 117
G P G PG AA+ P SP++V +QA A P A
Sbjct: 317 PAAGGPAGVSGQPGPGAAAAAPAPGVKAESPKRV-------VQA-----------APPAA 358
Query: 118 ERLRGSDPVLRARALV 133
+ L S P A ++V
Sbjct: 359 QTLAASGPASTAASMV 374
Score = 32.0 bits (71), Expect = 2.1
Identities = 35/117 (29%), Positives = 45/117 (38%), Gaps = 7/117 (5%)
Query: 22 AAATEEEEEEARQLLQTLQAAEGEAA--AAAGAGAGAAAAGAEGP--GSPGVPGSPPEAA 77
AA+ A + + AA G +G+ AGAA AG P G+PG PP A
Sbjct: 34 AASAAHHHHLAPRTPEVRAAAAGALGNHVVSGSPAGAAGAGPAAPAEGAPGAAPEPPPAG 93
Query: 78 SEPPTGLRFSPEQVACVCEALLQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVA 134
P G L+ AG A ++ PP E GS + A A VA
Sbjct: 94 RARPGGGGPQRPGPPSPRRPLVPAGPAPPAAKL---RPPPEGSAGSCAPVPAAAAVA 147
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 64.3 bits (155), Expect = 4e-10
Identities = 102/377 (27%), Positives = 131/377 (34%), Gaps = 68/377 (18%)
Query: 358 PLLLTGGGGAPPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPAL 417
PL G G PPP P P A L P G + L P GA + P P
Sbjct: 933 PLPPLPGAGIPPPPPLPGAAIPPPPPL---PGAG-IPL------PPPLPGAGIPPPPPLP 982
Query: 418 GEEVLGPL----AQVVPGPPTAATFPLPPGPVPAVAAPQVVPL-----SPPPGYP-TGLS 467
G + P A + P PP PP P+P P PL PPP P G+
Sbjct: 983 GAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP 1042
Query: 468 PTSPL----LNLPQVVPTSQVVTLPQAVG-----PLQLLAAGPGSPVKVAAAAGPANVHL 518
P PL + P +P + + P G P L AG P + A P L
Sbjct: 1043 PPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPL 1102
Query: 519 INSGVGVTALQLPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQV-- 576
GVG+ P PG + P + G + + A P + +V
Sbjct: 1103 --PGVGIP----PPPPLPG-----AGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGI 1151
Query: 577 --LPPAPGLALPLKPETAISVPEGGL---PVAPSPALPEAHALGTLSAQQPPPAAATTSS 631
PP PG +P P +P G+ P P +P L + PPP
Sbjct: 1152 PPPPPLPGAGIPPPP----PLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPP----LPG 1203
Query: 632 TSLPFSPDSPGL-LPNFPAP--PPEGLML-SPAAVPVWSAGLELSAGTEGLLEAEKGLGT 687
+P P PG+ +P PAP PP G + P +PV L G+ L
Sbjct: 1204 AGIPPPPPLPGMGIPPAPAPPLPPPGTGIPPPPLLPVSGPPLLPQVGSSTL--------- 1254
Query: 688 QAPHTVLRLPDPDPEGL 704
P LP P P GL
Sbjct: 1255 PTPQVCGFLPPPLPSGL 1271
Score = 61.2 bits (147), Expect = 3e-09
Identities = 96/369 (26%), Positives = 124/369 (33%), Gaps = 53/369 (14%)
Query: 306 LAGTGPPAPCPASSSILVNGSFLAASGSPAVLLNGGPVIINGLALGEASSLGPLLLTGGG 365
L G G P P P + + L +G P G I L A P L G G
Sbjct: 937 LPGAGIPPPPPLPGAAIPPPPPLPGAGIPLPPPLPGAGIPPPPPLPGAGIPPPPPLPGAG 996
Query: 366 GAPPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPL 425
PPP P P L P G P GA + P P G + P
Sbjct: 997 -IPPPPPLPGAGIPPPPPL---PGAGI-------PPPPPLPGAGIPPPPPLPGAGIPPPP 1045
Query: 426 ----AQVVPGPPTAATFPLPPGPVPAVAAPQVVPLS-----PPPGYP-TGLSPTSPLLNL 475
A + P PP PP P+P P PL PPP P G+ P PL +
Sbjct: 1046 PLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGV 1105
Query: 476 ----PQVVPTSQVVTLPQAVG-----PLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVT 526
P +P + + P G P L AG P + P L +G+
Sbjct: 1106 GIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPRVGIPPPPPLPGAGIPPP 1165
Query: 527 ALQLPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALP 586
+ P L + P + GV + + A P PP PG+ +P
Sbjct: 1166 PPLPGAGIPPPPPLPGVGIPPPPPLPGVGIPPPPPLPGAGIPPP-------PPLPGMGIP 1218
Query: 587 LKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGLLPN 646
P + P G+P P P LP + PP S++LP +P G L
Sbjct: 1219 PAPAPPLPPPGTGIP--PPPLLPVS----------GPPLLPQVGSSTLP-TPQVCGFL-- 1263
Query: 647 FPAPPPEGL 655
P P P GL
Sbjct: 1264 -PPPLPSGL 1271
Score = 55.8 bits (133), Expect = 1e-07
Identities = 85/350 (24%), Positives = 117/350 (33%), Gaps = 65/350 (18%)
Query: 367 APPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLA 426
+PPP P + +S ++ P + P + P P G E+L P
Sbjct: 857 SPPPLPCTESSSSMPGLGMVPPPPPPL----PGMTVPTLPSTAIPQPPPLQGTEMLPP-- 910
Query: 427 QVVPGPPTAATFPLPPGPVPAVAAPQVVPLS-----PPPGYP-TGLSPTSPL----LNLP 476
P PP PP P+P + PL PPP P + P PL + LP
Sbjct: 911 ---PPPPLPGAGIPPPPPLPGAGILPLPPLPGAGIPPPPPLPGAAIPPPPPLPGAGIPLP 967
Query: 477 QVVPTSQVVTLPQAVG-----PLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLP 531
+P + + P G P L AG P + A P L +G+ P
Sbjct: 968 PPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIPPPPPLPGAGIP------P 1021
Query: 532 SATAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPET 591
PG + P + G + + A P PP PG +P P
Sbjct: 1022 PPPLPG-----AGIPPPPPLPGAGIPPPPPLPGAGIPPP-------PPLPGAGIPPPP-- 1067
Query: 592 AISVPEGGLPVAPSPALPEAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGLLPNFPAPP 651
+P G+P P P LP A PPP +P P PG+ P PP
Sbjct: 1068 --PLPGAGIP--PPPPLPGA------GIPPPPP----LPGAGIPPPPPLPGV--GIPPPP 1111
Query: 652 PEGLMLSPAAVPVWSAGLELSAGTEGLLEAEKGLGTQAPHTVLRLPDPDP 701
P P P+ AG+ G G+ P + +P P P
Sbjct: 1112 PLPGAGIPPPPPLPGAGIPPPPPLPG-----AGIPPPPPLPRVGIPPPPP 1156
Score = 33.9 bits (76), Expect = 0.56
Identities = 64/252 (25%), Positives = 89/252 (35%), Gaps = 37/252 (14%)
Query: 485 VTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFLLANP 544
VT P GP + G V AAG + +SG SAT + L +
Sbjct: 141 VTGPGGPGPAEARVGGRPIAEDVETAAGAQDGQRTSSGSDTDIYSFHSATEQEDLL--SD 198
Query: 545 VSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPETAISV------PEG 598
+ + + QQ ++ L L P AP A+ +P + + P G
Sbjct: 199 IQQAIRLQQQQQQQLQLQLQQQQQQQQLQGAEEPAAPPTAVSPQPGAFLGLDRFLLGPSG 258
Query: 599 GLPVAP-SP----------ALPEAHALGTLSAQQPPP------AAATTSSTSLPFSPDSP 641
G AP SP LPE+ A QQPP + A + + P + DSP
Sbjct: 259 GAGEAPGSPDTEQALSALSDLPESLAAEPREPQQPPSPGGLPVSEAPSLPAAQPAAKDSP 318
Query: 642 GLLPNFPAPPPEGLMLSPAAVPVWSAGLELSAGTEGLLE-AEKG---------LGTQAPH 691
FP P G A PV AG G E E A +G +G AP
Sbjct: 319 SSTA-FPF-PEAGPGEEAAGAPVRGAGDTDEEGEEDAFEDAPRGSPGEEWAPEVGEDAPQ 376
Query: 692 TVLRLPDPDPEG 703
+ P+ + +G
Sbjct: 377 RLGEEPEEEAQG 388
Score = 32.7 bits (73), Expect = 1.2
Identities = 33/105 (31%), Positives = 45/105 (42%), Gaps = 14/105 (13%)
Query: 1 MATLPAEPSAGPAAGGEAVAAAAATEEEEEEARQLLQTL-----QAAEGEAAAAA---GA 52
+A P EP P+ GG V+ A + + A+ + +A GE AA A GA
Sbjct: 283 LAAEPREPQQPPSPGGLPVSEAPSLPAAQPAAKDSPSSTAFPFPEAGPGEEAAGAPVRGA 342
Query: 53 G----AGAAAAGAEGP-GSPGVPGSPPEAASEPPTGLRFSPEQVA 92
G G A + P GSPG + PE + P L PE+ A
Sbjct: 343 GDTDEEGEEDAFEDAPRGSPGEEWA-PEVGEDAPQRLGEEPEEEA 386
Score = 30.4 bits (67), Expect = 6.2
Identities = 66/269 (24%), Positives = 96/269 (35%), Gaps = 52/269 (19%)
Query: 259 GAGGGAPCKSESDGNPTTEDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGPPAP--CP 316
G GGA E+ G+P TE S + DL A E PP+P P
Sbjct: 255 GPSGGA---GEAPGSPDTEQALS-ALSDLPESLAAEPREPQQ----------PPSPGGLP 300
Query: 317 ASSSILVNGSFLAASGSPAVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQPSPQG 376
S + + + AA SP+ S+ P G G P +G
Sbjct: 301 VSEAPSLPAAQPAAKDSPS------------------STAFPFPEAGPGEEAAGAPV-RG 341
Query: 377 ASETKTSLVLDPQTGEVRLEEAQSEAPETKGA-QVAAPGPA-LGEEVLGPLAQVVPGPPT 434
A +T D + E E+A +P + A +V P LGEE + GP
Sbjct: 342 AGDT------DEEGEEDAFEDAPRGSPGEEWAPEVGEDAPQRLGEEP----EEEAQGPDA 391
Query: 435 AATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLPQAVGPL 494
A LP P P+ + PL P + T+ L+ P P+ P+ +
Sbjct: 392 PAAASLPGSPAPSQRCFKPYPLIT----PCYIKTTTRQLSSPNHSPSQSPNQSPR-IKRR 446
Query: 495 QLLAAGPGSPVKVAAAAGPANVHLINSGV 523
+ GS +A+ A PA H + G+
Sbjct: 447 PEPSLSRGSRTALASVAAPAKKHRADGGL 475
>gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens]
Length = 1003
Score = 63.2 bits (152), Expect = 9e-10
Identities = 116/429 (27%), Positives = 143/429 (33%), Gaps = 93/429 (21%)
Query: 263 GAPCKSESDGNPTTEDESSRSP-EDLERGAAPVSAEAAAQGSIFLAGTGPPAPCPASSSI 321
GAP + P +SP E L GA P G G P P P
Sbjct: 474 GAPAPPAASKAPVVPSPVLQSPSEGLGMGAGPACPLPPLAG-----GEAFPFPSPEQGLA 528
Query: 322 LVNGSFLAASGS-PAVLLNGGPV---IINGLALGEASSLGPLLLTGGGGAPPPQPSPQGA 377
L F G+ P L G P ++N G +LTGGGG PPP+P
Sbjct: 529 LSGAGFPGMLGALPLPLSLGQPPPSPLLNHSLFG--------VLTGGGGQPPPEP----- 575
Query: 378 SETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLAQVVP-GPPTAA 436
+L P G PGP PLA P GP
Sbjct: 576 -------LLPPPGG---------------------PGP--------PLAPGEPEGPSLLV 599
Query: 437 TFPLPPGPVPAVAAPQVVPLSPPPGYPTG--LSPTSPLLNLPQVVPTSQVVTLPQAVGPL 494
LPP P L PPP P L+ PLL L + + A GP
Sbjct: 600 ASLLPPPP---------SDLLPPPSAPPSNLLASFLPLLALGPTAGDGE-GSAEGAGGPS 649
Query: 495 QLLAAGPG--SPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFLLANPVSGSPI-- 550
+G G SP+ + P + +NS + L PS T P +L+ P G P
Sbjct: 650 GEPFSGLGDLSPLLFPPLSAPPTLIALNSALLAATLDPPSGTPPQPCVLSAPQPGPPTSS 709
Query: 551 VTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSP---- 606
VT G L S Q+L P G +L L ++++ G LP P
Sbjct: 710 VTTATTDPGASSLGKAPSNSGRPPQLLSPLLGASL-LGDLSSLTSSPGALPSLLQPPGPL 768
Query: 607 --------ALPEAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGLLPNFPA----PPPEG 654
LP A LS P A S P P++P L P PA P P
Sbjct: 769 LSGQLGLQLLPGGGAPPPLSEASSPLACLLQSLQIPPEQPEAPCLPPESPASALEPEPAR 828
Query: 655 LMLSPAAVP 663
LS A P
Sbjct: 829 PPLSALAPP 837
Score = 49.3 bits (116), Expect = 1e-05
Identities = 128/501 (25%), Positives = 171/501 (34%), Gaps = 142/501 (28%)
Query: 265 PCKSESDG--NPTTEDESSRSPEDLERGAAPV-------SAEAAAQGSIFLAGTGPPAPC 315
P S SDG N D P L G+ P S GS+ G PAP
Sbjct: 421 PGPSHSDGSFNLLGSDAHLPPPPTLSSGSPPQPRHPIQPSLPGTTSGSLSSV-PGAPAPP 479
Query: 316 PASSSILVNGSFLAASGSPAVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQPSP- 374
AS + +V L SP+ L G+ G A L PL GG P PSP
Sbjct: 480 AASKAPVVPSPVLQ---SPSEGL--------GMGAGPACPLPPL----AGGEAFPFPSPE 524
Query: 375 QGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLAQVVPGPPT 434
QG + + G + L + + P P P L + G L PP
Sbjct: 525 QGLALSGAGF--PGMLGALPLPLSLGQPP---------PSPLLNHSLFGVLTGGGGQPPP 573
Query: 435 AATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLS---------PTSPLLNLPQVVPTSQVV 485
P P GP P +A PG P G S P S LL P P++ +
Sbjct: 574 EPLLPPPGGPGPPLA----------PGEPEGPSLLVASLLPPPPSDLLPPPSAPPSNLLA 623
Query: 486 TLPQAVGPLQLLAAGPGS---PVKVAAAAGPANVHLINSGVG-VTALQLPSATAPGNFLL 541
+ L LLA GP + A GP+ SG+G ++ L P +AP +
Sbjct: 624 SF------LPLLALGPTAGDGEGSAEGAGGPSGEPF--SGLGDLSPLLFPPLSAPPTLIA 675
Query: 542 ANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPETAISVPEGGLP 601
N S L++ L P G
Sbjct: 676 LN--------------------------SALLAATLDPPSG------------------- 690
Query: 602 VAPSPALPEAHALGTLSAQQP-PPAAATTSSTSLPFSPDSPGLLPNFPAPPPEGLMLSPA 660
P P + LSA QP PP ++ T++T+ P S G P+ PP+ +LSP
Sbjct: 691 TPPQPCV--------LSAPQPGPPTSSVTTATTDP-GASSLGKAPSNSGRPPQ--LLSPL 739
Query: 661 AVPVWSAGLELSAGTEGLLEAEKGLGTQAPHTVLRLPDPDPEG-----LLLGATAGGEVD 715
G L L + L ++L+ P P G LL G A +
Sbjct: 740 ------LGASLLGDLSSLTSSPGAL-----PSLLQPPGPLLSGQLGLQLLPGGGAPPPLS 788
Query: 716 EGLEAEAKVLTQLQSVPVEEP 736
E A +L LQ +P E+P
Sbjct: 789 EASSPLACLLQSLQ-IPPEQP 808
Score = 45.1 bits (105), Expect = 2e-04
Identities = 96/411 (23%), Positives = 137/411 (33%), Gaps = 55/411 (13%)
Query: 272 GNPTTEDESSRSPED--LERGAAPVSAEAAAQGSIFLAGTGPPAPCPASSSILVNGSFLA 329
G+P SS P D L + ++ + A GP + P SS+ + L
Sbjct: 243 GSPPAPHASSSPPSDPPLFHCSDALTPPPLPPSNNLPAHPGPASQPPVSSATMHLPLVLG 302
Query: 330 A-SGSPAVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLDP 388
G+P V G P + L A+ P P PS +
Sbjct: 303 PLGGAPTVEGPGAPPFLASSLLSAAAK--------AQHPPLPPPSTLQGRRPRAQAPSAS 354
Query: 389 QTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATFPLPPGPV-PA 447
+ +R + + P T + GP VP P + P P P+ P+
Sbjct: 355 HSSSLRPSQRRPRRPPTVFRLLEGRGPQTPRRSRPRAPAPVPQP---FSLPEPSQPILPS 411
Query: 448 VAAPQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLPQAVGPLQ---------LLA 498
V + +P P + +LP PT + PQ P+Q L+
Sbjct: 412 VLSLLGLPTPGPSHSDGSFNLLGSDAHLPPP-PTLSSGSPPQPRHPIQPSLPGTTSGSLS 470
Query: 499 AGPGSPVKVAAAAGPANVHLINSGVGVTALQLPS---ATAPGNFLLANPVSGSPIVTGVA 555
+ PG+P AA+ P V LQ PS G P++G +
Sbjct: 471 SVPGAPAPPAASKAPV--------VPSPVLQSPSEGLGMGAGPACPLPPLAGGEAFPFPS 522
Query: 556 VQQGKIILTATFPTSMLVSQVLPPAPGLALP---LKPETAISVPEGGLPVAPSPALPEAH 612
+QG + A FP ML + LP + G P L + GG P P LP
Sbjct: 523 PEQGLALSGAGFP-GMLGALPLPLSLGQPPPSPLLNHSLFGVLTGGGGQPPPEPLLPPPG 581
Query: 613 ALGTLSAQQPPPAAATTSSTSLPFSPDSPGLLPNFPAPPPEGLMLSPAAVP 663
G PP A P P+ P LL PPP +L P + P
Sbjct: 582 GPG-------PPLA--------PGEPEGPSLLVASLLPPPPSDLLPPPSAP 617
Score = 35.0 bits (79), Expect = 0.25
Identities = 63/234 (26%), Positives = 78/234 (33%), Gaps = 31/234 (13%)
Query: 428 VVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLSPTSPLLNLP-QVVPTSQVVT 486
V PGPP+A PP VP P S PP P +S P L P + P
Sbjct: 138 VSPGPPSAR----PPCRVPPTTPLNGGPGSLPP-EPPSVSQAFPTLAGPGGLFPPRLADP 192
Query: 487 LPQ--AVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPS--ATAPGNFLLA 542
+P + P L SP A N N G + + +PS + P +
Sbjct: 193 VPSGGSSSPRFLPRGNAPSPAPPPPPAISLNAPSYNWGAALRSSLVPSDLGSPPAPHASS 252
Query: 543 NPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLAL--PLKPET----AISVP 596
+P S P+ A P + S LP PG A P+ T + P
Sbjct: 253 SPPSDPPLFH---------CSDALTPPPLPPSNNLPAHPGPASQPPVSSATMHLPLVLGP 303
Query: 597 EGGLPVAPSPALPEAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGLLPNFPAP 650
GG P P P A LS AAA LP G P AP
Sbjct: 304 LGGAPTVEGPGAPPFLASSLLS------AAAKAQHPPLPPPSTLQGRRPRAQAP 351
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 62.0 bits (149), Expect = 2e-09
Identities = 99/387 (25%), Positives = 128/387 (33%), Gaps = 51/387 (13%)
Query: 367 APPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGP----------- 415
A P QP P+G + V P+ S +P + A P P
Sbjct: 258 AHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPS 317
Query: 416 -----------ALGEEVLGPLAQVVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPT 464
+LG L +P PP + PP PA+A P PL PP P
Sbjct: 318 PPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALP---PLQAPPS-PP 373
Query: 465 GLSPTSPLLNLPQVVPTSQVVTLPQA------VGPLQLLAAGPGSPVKVAAAAGPANVHL 518
P SPL P + V L QA P+Q + P SP +A P+
Sbjct: 374 ASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPP 433
Query: 519 INSGVGVTALQLPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLP 578
+ + P A+ P + P P + +Q K A + Q LP
Sbjct: 434 SLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALP 493
Query: 579 PAPGLALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQ--QPPPAAATTSSTSLPF 636
P P A P LP++P A P A L+A Q PP+ + + P
Sbjct: 494 SPPASF----PGQAPFSPSASLPMSPL-ATPPPQAPPVLAAPLLQVPPSPPASPTLQAPR 548
Query: 637 SPDSPGLLPNFPAPPPE---GLMLSPAAVPVWSAGLELSAGTEGLLEAEKGLGTQAPHTV 693
P +PG P+ P L P P S LS L T P
Sbjct: 549 RPPTPG--PDTSVSGPRLTLALAPGPPPPPSRSPSSTLSGPD---LAGHSSSATSTPEE- 602
Query: 694 LRLPDPDPEGLLLGATAGGEVDEGLEA 720
LR D PEG GA A D L A
Sbjct: 603 LRGYDSGPEG---GAAASPPPDAELAA 626
Score = 55.1 bits (131), Expect = 2e-07
Identities = 82/322 (25%), Positives = 120/322 (37%), Gaps = 45/322 (13%)
Query: 370 PQPSPQGASETKTSLVLDPQTGEVRLEEAQS--EAPETKGAQVAAPGPALGEEVLGPLAQ 427
P+ S ASE T+ +P R A + P ++ +A P GP A+
Sbjct: 196 PRKSVSSASEHSTT---EPSPAARRRPSAGGGLQRPASRSLSSSAT-PLSSPARSGPSAR 251
Query: 428 VVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTL 487
P P + P P G + A+ PQV P G PL + P P+
Sbjct: 252 GTPRAPAHPSQPKPKG-LQALRPPQVTPPRKDAAPALG-----PLSSSPLATPSPSAPPS 305
Query: 488 PQAVGPLQLLAAGPGSPVKVAAAA-GPANVHLINSGV--------------GVTALQLPS 532
P A LQ L + P +P A + G + +S + AL LP
Sbjct: 306 PSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPP 365
Query: 533 ATAPGNFLLANPVSGSPIVTGVAVQQGKI---ILTATF---PTSMLVSQVLPPA-----P 581
AP + + P+S P+ T + +L A F P+ + + PPA P
Sbjct: 366 LQAPPSPPASPPLS--PLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSP 423
Query: 582 GLALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQPPPAAATTSSTSLPFSPDSP 641
P + +++ P +P +P PA P T Q PPP AA + P P +P
Sbjct: 424 SATPPSQAPPSLAAPPLQVPPSP-PASPPMSPSATPPPQAPPPLAAPPLQLAKP-PPQAP 481
Query: 642 GLLPNFPAPPPEGLMLSPAAVP 663
P PP + L PA+ P
Sbjct: 482 ---PALATPPLQALPSPPASFP 500
Score = 54.3 bits (129), Expect = 4e-07
Identities = 167/710 (23%), Positives = 229/710 (32%), Gaps = 171/710 (24%)
Query: 48 AAAGAGAGAAAAGAEGPGSPGVPGSPPEAASEPPTGLRFSPEQVACVCEALLQAGHAGRL 107
A AGA A AA A G +P PGSP P LR V A+ + A R
Sbjct: 8 AKAGAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALR-----VLGAAGAVGRKPLAERA 62
Query: 108 SRFLGALPPAERLRGSDPVLRARALVAFQRGEYAELYRLLE-------------SRPFPA 154
GA P R R A RGE A + +RP P
Sbjct: 63 GGIGGATIPESAPRAGPT--RTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPL 120
Query: 155 AHHAF---LQDLYLRARYHEAERARGRALGAVDKYRLRKKFPLPKTIWDGEETVYCFKER 211
++ R + EA + + GA R P P T R
Sbjct: 121 GQKGLRISAEETVARGKATEAPKRSALSAGA----RRDTSGPTPGT------PSPAMARR 170
Query: 212 SRAA-------LKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNR--------RQRD 256
SRAA A R PT ++ +++ + S T+ S + R R
Sbjct: 171 SRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPAS 230
Query: 257 RTGAGGGAPCKSESDGNPTTEDE-------SSRSPEDLE-----------RGAAPVSAEA 298
R+ + P S + P+ S P+ L+ + AAP
Sbjct: 231 RSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPL 290
Query: 299 AAQGSIFLAGTGPPAPCPASSSILVNGSFLAASGSPAVLLNGGPVIINGLALGEASSLGP 358
++ + + PP+P A S+ S A S A G P + + + L P
Sbjct: 291 SSSPLATPSPSAPPSPS-APPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSP 349
Query: 359 LLLTGGGGAPPPQ-------------PSPQGASETKTSLVLDPQTGE---VRLEEAQSEA 402
L PPPQ PSP + PQ V L +A
Sbjct: 350 L------ATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSP 403
Query: 403 PETKGAQV-------------AAPGPALGEEVLGPLAQVVPGPPTA-----ATFPLPPGP 444
P + Q A P + P QV P PP + + P P P
Sbjct: 404 PPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAP 463
Query: 445 VPAVAAPQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSP 504
P +AAP + PPP P L+ T PL LP P A P Q P S
Sbjct: 464 PP-LAAPPLQLAKPPPQAPPALA-TPPLQALPS----------PPASFPGQ----APFS- 506
Query: 505 VKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILT 564
PSA+ P + L P P++ +Q +
Sbjct: 507 --------------------------PSASLPMSPLATPPPQAPPVLAAPLLQ----VPP 536
Query: 565 ATFPTSMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSPALPEAHA-LGTLSAQQPP 623
+ + L + PP PG P+T++S P L +AP P P + + TLS P
Sbjct: 537 SPPASPTLQAPRRPPTPG------PDTSVSGPRLTLALAPGPPPPPSRSPSSTLSG--PD 588
Query: 624 PAAATTSSTSLP-----FSPDSPGLLPNFPAPPPEGLMLSPAAVPVWSAG 668
A ++S+TS P + G P P E PAA WS G
Sbjct: 589 LAGHSSSATSTPEELRGYDSGPEGGAAASPPPDAELAACHPAA---WSRG 635
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 62.0 bits (149), Expect = 2e-09
Identities = 86/326 (26%), Positives = 110/326 (33%), Gaps = 69/326 (21%)
Query: 368 PPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGE------EV 421
PPP PS S + + + RL+ A + GA P P + + ++
Sbjct: 646 PPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHS----GALFKPPTPPVMQSQSVKPQI 701
Query: 422 LGPLAQVVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLSPTSPL--------- 472
L P VVP PP P PP P P A Q+ P P P +P PL
Sbjct: 702 LVPPNGVVPPPP-----PPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQVQHIT 756
Query: 473 --------------LNLPQVVPTSQVVTLP-----QAVGPLQLLAA--GPGSPVKVAAAA 511
LP P +VT+P + V P+ AA P PV A
Sbjct: 757 QVAPPTPPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQ 816
Query: 512 GPANVHLINSGVGVTALQLPSATAP--GNFLLANPVSGSPIVTGVAVQQGKIILTATFPT 569
I + +P T P +F P S V V Q P
Sbjct: 817 PAFPASYIPPSPPTPPVPVPPPTLPKQQSFCAKPPPSPLSPVPSVVKQIASQFPPPPTPP 876
Query: 570 SMLVSQVLPPAPGLALPLKPETAISVPE---GGLPVAPSPALPEAHALGTLSAQQPPPAA 626
+M SQ L P P P P + P+ +PV PSP P PPP
Sbjct: 877 AM-ESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPV-PSPDFP------------PPP-- 920
Query: 627 ATTSSTSLPFSPDSPGLLPNFPAPPP 652
+SL F P P +P P PPP
Sbjct: 921 ---PESSLVFPPPPPSPVPAPPPPPP 943
Score = 52.8 bits (125), Expect = 1e-06
Identities = 86/362 (23%), Positives = 118/362 (32%), Gaps = 62/362 (17%)
Query: 352 EASSLGP-LLLTGGGGAPPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKG--- 407
++ S+ P +L+ G PPP P P + L P L + + P K
Sbjct: 693 QSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPSLPQFSAPPPPLKIHQV 752
Query: 408 ---AQVAAPGPALGEEVLGPLAQVVPGPP---------TAATFPLPPGPVPAVAAPQVVP 455
QVA P P + PL P P T P+ P P V P
Sbjct: 753 QHITQVAPPTPPPPPPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTPTPPVPP 812
Query: 456 LSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPAN 515
P +P P SP PT V P + Q A P P+
Sbjct: 813 AKKQPAFPASYIPPSP--------PTPPVPVPPPTLPKQQSFCAKP----------PPSP 854
Query: 516 VHLINSGVGVTALQLPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILTAT--FPTSMLV 573
+ + S V A Q P P + + P+ P+ VA Q + P+S+ V
Sbjct: 855 LSPVPSVVKQIASQFPPPPTP-PAMESQPL--KPVPANVAPQSPPAVKAKPKWQPSSIPV 911
Query: 574 -SQVLPPAP---GLALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSA-------QQP 622
S PP P L P P + + P P SP ++ + G ++ ++P
Sbjct: 912 PSPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKP 971
Query: 623 PPAAATTSSTSL--------PFSPDSPGLLPNFPAPPPEGL----MLSPAAVPVWSAGLE 670
PP SS P P L+ F P G L P A P L
Sbjct: 972 PPTPQRNSSIKSSSGAEHPEPKRPSVDSLVSKFTPPAESGSPSKETLPPPAAPPKPGKLN 1031
Query: 671 LS 672
LS
Sbjct: 1032 LS 1033
Score = 50.1 bits (118), Expect = 8e-06
Identities = 70/296 (23%), Positives = 104/296 (35%), Gaps = 23/296 (7%)
Query: 366 GAPPPQPSPQGASETKTSLVLDPQTGE-VRLEEAQSEAPETKGAQVAAPGPALGEE--VL 422
G QP+ S++ S V +LEE+ E+ + P L + ++
Sbjct: 557 GVSDTQPAGHVRSQSIVSSVFSEAWKRGTQLEESSKARMESMNRPYTSLVPPLSPQPKIV 616
Query: 423 GPLAQVVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTS 482
P P PP LPP P P P P PPP P+ +P++ P V S
Sbjct: 617 TPYTASQPSPP------LPPPPPPPPPPPPPPP-PPPPPLPSQSAPSAGSA-APMFVKYS 668
Query: 483 QVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFLL- 541
+ L A L P PV + + P + + +GV P PG+ +
Sbjct: 669 TITRLQNASQHSGALFKPPTPPVMQSQSVKP-QILVPPNGVVPPPPPPPPPPTPGSAMAQ 727
Query: 542 ANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPETAISVPEGGLP 601
P +P + + + + + + PP P + PL P+ P L
Sbjct: 728 LKPAPCAPSLPQFSAPPPPLKIHQVQHITQVAPPTPPPPPPIPAPLPPQ----APPKPLV 783
Query: 602 VAPSPALPEAHALGTLSAQQP---PPAAATTSSTSLPFS--PDSPGLLPNFPAPPP 652
P+P + A A P PP + P S P SP P P PPP
Sbjct: 784 TIPAPTSTKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPPSPP-TPPVPVPPP 838
Score = 44.3 bits (103), Expect = 4e-04
Identities = 83/361 (22%), Positives = 127/361 (35%), Gaps = 49/361 (13%)
Query: 369 PPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLAQV 428
PP P+P S L P V + + + K + P P+ P + +
Sbjct: 870 PPPPTPPAME----SQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSL 925
Query: 429 VPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYPTGLS--------PTSPLLNLPQVVP 480
V PP + P PP P P A+P S PG T + P +P N +
Sbjct: 926 VFPPPPPSPVPAPPPPPPPTASP-TPDKSGSPGKKTSKTSSPGGKKPPPTPQRN--SSIK 982
Query: 481 TSQVVTLPQAVGPL--QLLA-----AGPGSPVKVAA---AAGPANVHLINSGVGVTALQL 530
+S P+ P L++ A GSP K AA P L SGV +
Sbjct: 983 SSSGAEHPEPKRPSVDSLVSKFTPPAESGSPSKETLPPPAAPPKPGKLNLSGVNL----- 1037
Query: 531 PSATAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPE 590
PG + +P+++G +GK + FP+ S PP P LPL P
Sbjct: 1038 -----PGVLQQGCVSAKAPVLSG----RGKDSVVE-FPSPPSDSDFPPPPPETELPLPPI 1087
Query: 591 TAISVPEGGLPVAPSPALPEAHALGTLSAQQPPPA-------AATTSSTSLPFSPDSPGL 643
+V G + P+ +S ++ PP + + + P +
Sbjct: 1088 EIPAVFSGNTSPKVAVVNPQPQQWSKMSVKKAPPPTRPKRNDSTRLTQAEISEQPTMATV 1147
Query: 644 LPNFPAPPPEGLMLSPAAVPVWSAGLELSAGT-EGLLEAEKGLG-TQAPHTVLRLPDPDP 701
+P P P L + P + + L+ + T G L + A + LP P P
Sbjct: 1148 VPQVPTSPKSSLSVQPGFLADLNRTLQRKSITRHGSLSSRMSRAEPTATMDDMALPPPPP 1207
Query: 702 E 702
E
Sbjct: 1208 E 1208
>gi|33286442 BCL6 co-repressor-like 1 [Homo sapiens]
Length = 1711
Score = 61.6 bits (148), Expect = 3e-09
Identities = 106/420 (25%), Positives = 163/420 (38%), Gaps = 53/420 (12%)
Query: 311 PPAPCPASSSILVNGSFLAASGSPAVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPP 370
PPAP AS V +F PA + + G V + +A + PL AP P
Sbjct: 205 PPAPGSASVPHSVPDAFQVPLSVPAPVPHSGLVPVQ-VATSVPAPSPPL-------APVP 256
Query: 371 QPSPQGASETKTSLVLDPQTGEVR---LEEAQSEAPETKGAQVAAPGPA-LGEEVLGPLA 426
+P A + +L+ D V L + AP + ++AP PA L V P
Sbjct: 257 ALAP--APPSVPTLISDSNPLSVSASVLVPVPASAPPSGPVPLSAPAPAPLSVPVSAPPL 314
Query: 427 QVV--PGPPTAATFPLPPGPVPAVA-----APQVVPLSPPPGYPTGLSPTSPLLNLPQVV 479
++ P PP+A T L P P P +A P P P PT +P+S + P ++
Sbjct: 315 ALIQAPVPPSAPTLVLAPVPTPVLAPMPASTPPAAPAPPSVPMPTP-TPSSGPPSTPTLI 373
Query: 480 PTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNF 539
P +P A P + P +P+ A A I + ++ + P+A AP
Sbjct: 374 PAFAPTPVP-APTPAPIFTPAP-TPMPAATPAAIPTSAPIPASFSLSRVCFPAAQAPA-- 429
Query: 540 LLANPVS---------GSPIVTGVAVQQGKIILTATFPTSMLVSQ--VLPPAPGLALPLK 588
+ P+S P+V G+ + AT PT++ VS LP P
Sbjct: 430 MQKVPLSFQPGTVLTPSQPLVYIPPPSCGQPLSVATLPTTLGVSSTLTLPVLPSYLQDRC 489
Query: 589 PETAISVPE-GGLPVAPSPALP--EAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGLLP 645
++ PE P A S A P L +L + P + + S+T+ P PG L
Sbjct: 490 LPGVLASPELRSYPYAFSVARPLTSDSKLVSLEVNRLPCTSPSGSTTTQPAPDGVPGPLA 549
Query: 646 NFP--------APPPEGLMLSPAAVPVWSAGLELSAGTEGLLEAEKGLGTQAPHTVLRLP 697
+ P P+ L+ +P+ ++ +GTE E GT + L+ P
Sbjct: 550 DTSLVTASAKVLPTPQPLLPAPSGSSAPPHPAKMPSGTEQQTE-----GTSVTFSPLKSP 604
>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
Length = 1094
Score = 60.8 bits (146), Expect = 4e-09
Identities = 106/409 (25%), Positives = 143/409 (34%), Gaps = 106/409 (25%)
Query: 353 ASSLGPLLLTGGGGAPPPQP----SPQGASETKTSLVLDPQTG----EVRLEEAQSEAPE 404
A+S P L GG PP P SP +++ P G +AQ PE
Sbjct: 555 ANSWVPGLSPGGSRRPPRSPERTLSPSSGYSSQSGTPTLPPKGLAGPPASPGKAQPPKPE 614
Query: 405 ------TKGAQVAAPGPALGEEVLGPLAQVVPGP----PTAATFPLPPGP-VPAVAAPQV 453
+ GA V++ +L P GP P F +PP P VPA
Sbjct: 615 RVTSLRSPGASVSSSLTSLCSSSSDPAPSDRSGPQILTPLGDRFVIPPHPKVPA------ 668
Query: 454 VPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGP 513
P SPPP P +P +P L P VVP GP+ A P SP P
Sbjct: 669 -PFSPPPSKPRSPNPAAPALAAPAVVP-----------GPVSTTDASPQSPPTPQTTLTP 716
Query: 514 ANVHLINSGVGVTALQLPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLV 573
+ ++ Q P + P ++ P + P V V+ TA P L
Sbjct: 717 -----LQESPVISKDQSPPPSPPPSYHPPPPPTKKP---EVVVEAPSASETAEEP---LQ 765
Query: 574 SQVLPPAPGLALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQP----------- 622
PP P P PE E L +A P P A ++++ +P
Sbjct: 766 DPNWPPPP----PPAPE------EQDLSMADFP--PPEEAFFSVASPEPAGPSGSPELVS 813
Query: 623 PPAAATTSSTSLPFSPDSPGLLPNFPAPPPEGLMLSPAAVPVWSAGLELSAGTEGLLEAE 682
PAA+++S+T+L P P P PPP PA P
Sbjct: 814 SPAASSSSATALQIQP------PGSPDPPP----APPAPAP------------------- 844
Query: 683 KGLGTQAPHTVLRLPDPDPEGLLLGATAGGEVDEGLEAEAKVLTQLQSV 731
+ AP V +LP +P G G GG E + A + LQ V
Sbjct: 845 ---ASSAPGHVAKLPQKEPVGCSKG---GGPPREDVGAPLVTPSLLQMV 887
Score = 38.1 bits (87), Expect = 0.030
Identities = 75/332 (22%), Positives = 112/332 (33%), Gaps = 46/332 (13%)
Query: 292 APVSAEAAAQGSIFLAGTGPPAPCPASSSILV-------NGSFLAASGSPAVLLNGGPVI 344
AP ++E A + PP P P + + F AS PA +G P +
Sbjct: 753 APSASETAEEPLQDPNWPPPPPPAPEEQDLSMADFPPPEEAFFSVASPEPAGP-SGSPEL 811
Query: 345 INGLALGEASSLGPLLLTGGGGAPPP-QPSPQGASETKTSLVLDPQTGEVRLEEAQSEAP 403
++ A +S+ + G PPP P+P AS + PQ V +
Sbjct: 812 VSSPAASSSSATALQIQPPGSPDPPPAPPAPAPASSAPGHVAKLPQKEPVGCSKGGGPPR 871
Query: 404 ETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATFP-LPPGPVPAVAAPQVVPLSPPPGY 462
E GA + P+L + V G PT A P P P+ + + SP P
Sbjct: 872 EDVGAPLVT--PSLLQMVRLRSVGAPGGAPTPALGPSAPQKPLRRALSGRA---SPVPAP 926
Query: 463 PTGLSPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSG 522
+GL L + S+ ++ Q GP + P SP A+
Sbjct: 927 SSGLHAAVRLKACS--LAASEGLSSAQPNGPPEAEPRPPQSPASTAS---------FIFS 975
Query: 523 VGVTALQLPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPG 582
G LQL +P T +Q+ + + +S+ PP
Sbjct: 976 KGSRKLQLERPVSP--------------ETQADLQRNLVAELRS------ISEQRPPQAP 1015
Query: 583 LALPLKPETAISVPEGGLPVAPSPALPEAHAL 614
P P P G+P SP+ P A L
Sbjct: 1016 KKSPKAPPPVARKPSVGVPPPASPSYPRAEPL 1047
Score = 36.6 bits (83), Expect = 0.086
Identities = 29/89 (32%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Query: 577 LPPAPGLA----LPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQPPPAAATTSST 632
LPP P LP P T S G P P+PA L +++PP + T S
Sbjct: 521 LPPKPERKQQPQLPRPPTTGGSEGAGAAPCPPNPANSWVPGLSPGGSRRPPRSPERTLSP 580
Query: 633 SLPFSPDSPGLLPNFPAPPPEGLMLSPAA 661
S +S S P PP+GL PA+
Sbjct: 581 SSGYSSQS-----GTPTLPPKGLAGPPAS 604
Score = 33.1 bits (74), Expect = 0.95
Identities = 37/146 (25%), Positives = 54/146 (36%), Gaps = 17/146 (11%)
Query: 578 PPAPGLALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQPPPAAATTSSTSLPFS 637
PP P + ++VP+G L + P P + L +PP + + + P
Sbjct: 497 PPPPPRRTHSLHQRGLAVPDGPLGLPPKPERKQQPQL-----PRPPTTGGSEGAGAAPCP 551
Query: 638 PDS-----PGLLPNFPAPPPEGLMLSPAAVPVWSAGLELSAGTEGLLEAEKGLGTQAPHT 692
P+ PGL P PP SP S+G +GT L KGL P +
Sbjct: 552 PNPANSWVPGLSPGGSRRPPR----SPERTLSPSSGYSSQSGTPTL--PPKGL-AGPPAS 604
Query: 693 VLRLPDPDPEGLLLGATAGGEVDEGL 718
+ P PE + + G V L
Sbjct: 605 PGKAQPPKPERVTSLRSPGASVSSSL 630
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 60.5 bits (145), Expect = 6e-09
Identities = 83/318 (26%), Positives = 112/318 (35%), Gaps = 50/318 (15%)
Query: 368 PPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGA---QVAAPGPALGEEVL-- 422
P PQ + + + +L Q ++ + AP + Q+ PGP +
Sbjct: 162 PSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPP 221
Query: 423 --GPLAQVVPGPPTAATFPLPPGPVPAVAA--PQVVPLSPPPGYPTGLSPTSPLLNLPQV 478
P A P P A T P+P + A PQ P PP +P+ P PL
Sbjct: 222 QGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGS--- 278
Query: 479 VPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGN 538
P A Q G G P + AGP L+ LP + G
Sbjct: 279 ------AGQPSAPSHAQPPLHGQGPPGPHSLQAGP----LLQHPGPPQPFGLPPQASQGQ 328
Query: 539 FLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALP-LKPETAISVPE 597
L + + T + + + L + P Q LPPAP LA+P +KP +P+
Sbjct: 329 APLGTSPAAAYPHTSLQLPASQSALQSQQPPR---EQPLPPAP-LAMPHIKPPPTTPIPQ 384
Query: 598 GGLPVA---------PSPA-----LPEAHALGTLSA--------QQPPPAAATTSSTSLP 635
P A PSP LP AL LS+ PPP S LP
Sbjct: 385 LPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLP 444
Query: 636 FSP-DSPGLLPNFPAPPP 652
SP PGL + PPP
Sbjct: 445 SSPAQPPGLTQSQNLPPP 462
Score = 35.8 bits (81), Expect = 0.15
Identities = 96/384 (25%), Positives = 125/384 (32%), Gaps = 73/384 (19%)
Query: 272 GNPTTEDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGP-PAPCPASSSILVNGSFLAA 330
G+PT +S++P + APV Q P P P P S +
Sbjct: 223 GSPT----ASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGS 278
Query: 331 SGSPAVLLNGGPVIINGLALGEAS-SLGPLLLTGGGGAP---PPQPSPQGASETKTSLVL 386
+G P+ + P + G S GPLL G P PPQ S QG + TS
Sbjct: 279 AGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQAS-QGQAPLGTSPAA 337
Query: 387 DPQTGEVRLEEAQS--EAPETKGAQVAAPGPALGEEVLGPLAQVVPG------------- 431
++L +QS ++ + Q P P + P +P
Sbjct: 338 AYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHL 397
Query: 432 ------------PPTAATFPL-------PPG--PVPAVAAPQVVPLSPPPGYPTGLSPTS 470
PP A PL PP P P PQ PL P P GL+ +
Sbjct: 398 SGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQ 457
Query: 471 PLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQL 530
NLP P S T V P A P P GP +T
Sbjct: 458 ---NLPP-PPASHPPTGLHQVAPQPPFAQHPFVP------GGPP---------PITPPTC 498
Query: 531 PSATAPGNFLLANP-VSGSPIVTGVAVQQGKII--LTATFPTSMLVSQVLPPAPGLALPL 587
PS + P A P S P +G A G I + PT + + L A P
Sbjct: 499 PSTSTPP----AGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPP 554
Query: 588 KPETAISVPEGGLPVAPSPALPEA 611
P + S PE + PS A A
Sbjct: 555 PPPRSPS-PEPTVVDTPSHASQSA 577
Score = 30.0 bits (66), Expect = 8.1
Identities = 38/150 (25%), Positives = 51/150 (34%), Gaps = 12/150 (8%)
Query: 568 PTSMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQPPPAAA 627
P ++ + PAP A P P+ P P P A + + QP A
Sbjct: 184 PPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTA----SQAPNQPQAPTA 239
Query: 628 TTSSTSLPFSPDSPGLLPNFPAPPPEGLMLSPAAVPVWSAGLELSAGTEGLLEAEKGLGT 687
T + +P P P PPP P SAG + SA + G G
Sbjct: 240 PVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAG-QPSAPSHAQPPLH-GQGP 297
Query: 688 QAPHTVLRLP------DPDPEGLLLGATAG 711
PH++ P P P GL A+ G
Sbjct: 298 PGPHSLQAGPLLQHPGPPQPFGLPPQASQG 327
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 60.5 bits (145), Expect = 6e-09
Identities = 83/318 (26%), Positives = 112/318 (35%), Gaps = 50/318 (15%)
Query: 368 PPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGA---QVAAPGPALGEEVL-- 422
P PQ + + + +L Q ++ + AP + Q+ PGP +
Sbjct: 716 PSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPP 775
Query: 423 --GPLAQVVPGPPTAATFPLPPGPVPAVAA--PQVVPLSPPPGYPTGLSPTSPLLNLPQV 478
P A P P A T P+P + A PQ P PP +P+ P PL
Sbjct: 776 QGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGS--- 832
Query: 479 VPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGN 538
P A Q G G P + AGP L+ LP + G
Sbjct: 833 ------AGQPSAPSHAQPPLHGQGPPGPHSLQAGP----LLQHPGPPQPFGLPPQASQGQ 882
Query: 539 FLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALP-LKPETAISVPE 597
L + + T + + + L + P Q LPPAP LA+P +KP +P+
Sbjct: 883 APLGTSPAAAYPHTSLQLPASQSALQSQQPPR---EQPLPPAP-LAMPHIKPPPTTPIPQ 938
Query: 598 GGLPVA---------PSPA-----LPEAHALGTLSA--------QQPPPAAATTSSTSLP 635
P A PSP LP AL LS+ PPP S LP
Sbjct: 939 LPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLP 998
Query: 636 FSP-DSPGLLPNFPAPPP 652
SP PGL + PPP
Sbjct: 999 SSPAQPPGLTQSQNLPPP 1016
Score = 35.8 bits (81), Expect = 0.15
Identities = 96/384 (25%), Positives = 125/384 (32%), Gaps = 73/384 (19%)
Query: 272 GNPTTEDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGP-PAPCPASSSILVNGSFLAA 330
G+PT +S++P + APV Q P P P P S +
Sbjct: 777 GSPT----ASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGS 832
Query: 331 SGSPAVLLNGGPVIINGLALGEAS-SLGPLLLTGGGGAP---PPQPSPQGASETKTSLVL 386
+G P+ + P + G S GPLL G P PPQ S QG + TS
Sbjct: 833 AGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQAS-QGQAPLGTSPAA 891
Query: 387 DPQTGEVRLEEAQS--EAPETKGAQVAAPGPALGEEVLGPLAQVVPG------------- 431
++L +QS ++ + Q P P + P +P
Sbjct: 892 AYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHL 951
Query: 432 ------------PPTAATFPL-------PPG--PVPAVAAPQVVPLSPPPGYPTGLSPTS 470
PP A PL PP P P PQ PL P P GL+ +
Sbjct: 952 SGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQ 1011
Query: 471 PLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQL 530
NLP P S T V P A P P GP +T
Sbjct: 1012 ---NLPP-PPASHPPTGLHQVAPQPPFAQHPFVP------GGPP---------PITPPTC 1052
Query: 531 PSATAPGNFLLANP-VSGSPIVTGVAVQQGKII--LTATFPTSMLVSQVLPPAPGLALPL 587
PS + P A P S P +G A G I + PT + + L A P
Sbjct: 1053 PSTSTPP----AGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPP 1108
Query: 588 KPETAISVPEGGLPVAPSPALPEA 611
P + S PE + PS A A
Sbjct: 1109 PPPRSPS-PEPTVVDTPSHASQSA 1131
Score = 30.0 bits (66), Expect = 8.1
Identities = 38/150 (25%), Positives = 51/150 (34%), Gaps = 12/150 (8%)
Query: 568 PTSMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQPPPAAA 627
P ++ + PAP A P P+ P P P A + + QP A
Sbjct: 738 PPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTA----SQAPNQPQAPTA 793
Query: 628 TTSSTSLPFSPDSPGLLPNFPAPPPEGLMLSPAAVPVWSAGLELSAGTEGLLEAEKGLGT 687
T + +P P P PPP P SAG + SA + G G
Sbjct: 794 PVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAG-QPSAPSHAQPPLH-GQGP 851
Query: 688 QAPHTVLRLP------DPDPEGLLLGATAG 711
PH++ P P P GL A+ G
Sbjct: 852 PGPHSLQAGPLLQHPGPPQPFGLPPQASQG 881
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 60.5 bits (145), Expect = 6e-09
Identities = 83/318 (26%), Positives = 112/318 (35%), Gaps = 50/318 (15%)
Query: 368 PPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGA---QVAAPGPALGEEVL-- 422
P PQ + + + +L Q ++ + AP + Q+ PGP +
Sbjct: 716 PSPQDNESDSDSSAQQQMLQAQPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPP 775
Query: 423 --GPLAQVVPGPPTAATFPLPPGPVPAVAA--PQVVPLSPPPGYPTGLSPTSPLLNLPQV 478
P A P P A T P+P + A PQ P PP +P+ P PL
Sbjct: 776 QGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGS--- 832
Query: 479 VPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGN 538
P A Q G G P + AGP L+ LP + G
Sbjct: 833 ------AGQPSAPSHAQPPLHGQGPPGPHSLQAGP----LLQHPGPPQPFGLPPQASQGQ 882
Query: 539 FLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLALP-LKPETAISVPE 597
L + + T + + + L + P Q LPPAP LA+P +KP +P+
Sbjct: 883 APLGTSPAAAYPHTSLQLPASQSALQSQQPPR---EQPLPPAP-LAMPHIKPPPTTPIPQ 938
Query: 598 GGLPVA---------PSPA-----LPEAHALGTLSA--------QQPPPAAATTSSTSLP 635
P A PSP LP AL LS+ PPP S LP
Sbjct: 939 LPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLP 998
Query: 636 FSP-DSPGLLPNFPAPPP 652
SP PGL + PPP
Sbjct: 999 SSPAQPPGLTQSQNLPPP 1016
Score = 35.8 bits (81), Expect = 0.15
Identities = 96/384 (25%), Positives = 125/384 (32%), Gaps = 73/384 (19%)
Query: 272 GNPTTEDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGP-PAPCPASSSILVNGSFLAA 330
G+PT +S++P + APV Q P P P P S +
Sbjct: 777 GSPT----ASQAPNQPQAPTAPVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGS 832
Query: 331 SGSPAVLLNGGPVIINGLALGEAS-SLGPLLLTGGGGAP---PPQPSPQGASETKTSLVL 386
+G P+ + P + G S GPLL G P PPQ S QG + TS
Sbjct: 833 AGQPSAPSHAQPPLHGQGPPGPHSLQAGPLLQHPGPPQPFGLPPQAS-QGQAPLGTSPAA 891
Query: 387 DPQTGEVRLEEAQS--EAPETKGAQVAAPGPALGEEVLGPLAQVVPG------------- 431
++L +QS ++ + Q P P + P +P
Sbjct: 892 AYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMPHIKPPPTTPIPQLPAPQAHKHPPHL 951
Query: 432 ------------PPTAATFPL-------PPG--PVPAVAAPQVVPLSPPPGYPTGLSPTS 470
PP A PL PP P P PQ PL P P GL+ +
Sbjct: 952 SGPSPFSMNANLPPPPALKPLSSLSTHHPPSAHPPPLQLMPQSQPLPSSPAQPPGLTQSQ 1011
Query: 471 PLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQL 530
NLP P S T V P A P P GP +T
Sbjct: 1012 ---NLPP-PPASHPPTGLHQVAPQPPFAQHPFVP------GGPP---------PITPPTC 1052
Query: 531 PSATAPGNFLLANP-VSGSPIVTGVAVQQGKII--LTATFPTSMLVSQVLPPAPGLALPL 587
PS + P A P S P +G A G I + PT + + L A P
Sbjct: 1053 PSTSTPP----AGPGTSAQPPCSGAAASGGSIAGGSSCPLPTVQIKEEALDDAEEPESPP 1108
Query: 588 KPETAISVPEGGLPVAPSPALPEA 611
P + S PE + PS A A
Sbjct: 1109 PPPRSPS-PEPTVVDTPSHASQSA 1131
Score = 30.0 bits (66), Expect = 8.1
Identities = 38/150 (25%), Positives = 51/150 (34%), Gaps = 12/150 (8%)
Query: 568 PTSMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQPPPAAA 627
P ++ + PAP A P P+ P P P A + + QP A
Sbjct: 738 PPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTA----SQAPNQPQAPTA 793
Query: 628 TTSSTSLPFSPDSPGLLPNFPAPPPEGLMLSPAAVPVWSAGLELSAGTEGLLEAEKGLGT 687
T + +P P P PPP P SAG + SA + G G
Sbjct: 794 PVPHTHIQQAPALHPQRPPSPHPPPHPSPHPPLQPLTGSAG-QPSAPSHAQPPLH-GQGP 851
Query: 688 QAPHTVLRLP------DPDPEGLLLGATAG 711
PH++ P P P GL A+ G
Sbjct: 852 PGPHSLQAGPLLQHPGPPQPFGLPPQASQG 881
>gi|149773456 hypothetical protein LOC643314 [Homo sapiens]
Length = 1427
Score = 60.1 bits (144), Expect = 7e-09
Identities = 116/496 (23%), Positives = 161/496 (32%), Gaps = 73/496 (14%)
Query: 277 EDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGPPAPCPASSSILVNGSFLAASGSPAV 336
ED ++ + ER P + +G+ +A P A A
Sbjct: 894 EDVTAAAVSAPERATVPAVTVSVPEGTAAVAAVSSPEE--------------TAPAVAAA 939
Query: 337 LLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLDPQTGEVRLE 396
+ G + G + A+ + +T G P +P T +P T VR+
Sbjct: 940 ITQEGMSAVAGFSPEWAALAITVPITEEDGTPEGPVTPA----TTVHAPEEPDTAAVRV- 994
Query: 397 EAQSEAPETKGAQVAAPGPALGEEVLGPLAQV-VPGPPTAATFPLPP-----GPVPAVAA 450
+ E P + A V P EE P A V P PT+ +PP P AV
Sbjct: 995 -STPEEPASPAAAVPTP-----EEPTSPAAAVPTPEEPTSPAAAVPPPEEPTSPAAAVPT 1048
Query: 451 PQVVPLSPPPGYPTGLSPTSPLLNLP---------QVVPTSQVVTLPQAVGPLQLLAAGP 501
P+ P SP PT PTSP +P VPT + T P A P P
Sbjct: 1049 PEE-PTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSPAAAVPTPEEPTSP 1107
Query: 502 GSPVKV------AAAAGPANVHLINSGVGVTALQLPSATAPGNFLLANPVSGSPIVTGVA 555
+ V AAA P + V + P+ AP + P + V
Sbjct: 1108 AAAVPTPEEPASPAAAVPTPEEPASPAAAVPTPEEPAFPAPA---VPTPEESASAAVAVP 1164
Query: 556 VQQGKIILTATFPTSMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSPALPE--AHA 613
+ A PT + L P P A SVP P A L E + A
Sbjct: 1165 TPEESASPAAAVPTPAESASFAAVVATLEEPTSP--AASVP---TPAAMVATLEEFTSPA 1219
Query: 614 LGTLSAQQPPPAAATTSSTSLPFSPDSPGLLPNFPAP--------PPEGLMLSPAAVPVW 665
++++P AA S+ P SP +P P PE L A+VP
Sbjct: 1220 ASVPTSEEPASLAAAVSNPEEPTSP--AAAVPTLEEPTSSAAAVLTPEELSSPAASVPTP 1277
Query: 666 SAGLELSAGTEGLLEAEKGLGTQAPHTVLRLPD---PDPEGLLLGATAGGEVDEGLEAEA 722
+A L E V +P P PE + A A ++E
Sbjct: 1278 EEPASPAAAVSNLEEPASPAAAVPTPEVAAIPAASVPTPEVPAIPAAAVPPMEEVSPIGV 1337
Query: 723 KVL---TQLQSVPVEE 735
L SVP+ E
Sbjct: 1338 PFLGVSAHTDSVPISE 1353
>gi|239742468 PREDICTED: double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 60.1 bits (144), Expect = 7e-09
Identities = 122/466 (26%), Positives = 166/466 (35%), Gaps = 75/466 (16%)
Query: 43 EGEAAAAAGAGAGAAAAGAEGPGSPGVPGSPPEAASEPPTGLRFSPEQVACVC----EAL 98
+G A AG AA A V GSPP + P+ ++F P A ++
Sbjct: 13 QGRLAGWLAVRAGLLAAPAAVHSPAEVHGSPPASLCPRPS-VKFRPGLTAMALPTPSDST 71
Query: 99 LQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEY---AELYRLLESR--PFP 153
L A GR R P++ LRA F+R Y A RL ++ P P
Sbjct: 72 LPAEARGRGRRRRLVWTPSQ-----SEALRA----CFERNPYPGIATRERLAQAIGIPEP 122
Query: 154 AAHHAFLQDLYLRARYHEAERA-----RGRALGAVDKYRLRKKFPLPKTIWDGEETVYCF 208
F + + R H E RG G R+K +T G +T
Sbjct: 123 RVQIWFQNERSRQLRQHRRESRPWPGRRGPPEG-------RRK----RTAVTGSQT---- 167
Query: 209 KERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTGAGGGAPCKS 268
A L + +R+P + LA TGL +++ WF+NRR R G GG AP ++
Sbjct: 168 -----ALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR-HPGQGGRAPAQA 221
Query: 269 ESDGNPTTEDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGPPAP-CPASSSILVNGSF 327
G + P AP A G+ GTG PAP P + L G+F
Sbjct: 222 ---GGLCSAAPGGGHP-------APSWVAFAHTGA---WGTGLPAPHVPCAPGALPQGAF 268
Query: 328 LAASGSPAVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLD 387
++ + A P + A P G P P P GA +
Sbjct: 269 VSQAARAA------PALQPSQAAPAEGVSQPAPARGDFAYAAPAP-PDGALSHPQAPRWP 321
Query: 388 PQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATFP---LPPGP 444
P G+ R + VA PGPA GP Q V PPT+ P GP
Sbjct: 322 PHPGKSREDRDPQRDGLPGPCAVAQPGPAQA----GPQGQGVLAPPTSQGSPWWGWGRGP 377
Query: 445 VPAVAA--PQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLP 488
A AA PQ PP P S ++ + + SQ + P
Sbjct: 378 QVAGAAWEPQAGAAPPPQPAPPDASASARQGQMQGIPAPSQALQEP 423
>gi|194272172 double homeobox, 4 [Homo sapiens]
Length = 485
Score = 60.1 bits (144), Expect = 7e-09
Identities = 122/466 (26%), Positives = 166/466 (35%), Gaps = 75/466 (16%)
Query: 43 EGEAAAAAGAGAGAAAAGAEGPGSPGVPGSPPEAASEPPTGLRFSPEQVACVC----EAL 98
+G A AG AA A V GSPP + P+ ++F P A ++
Sbjct: 13 QGRLAGWLAVRAGLLAAPAAVHSPAEVHGSPPASLCPRPS-VKFRPGLTAMALPTPSDST 71
Query: 99 LQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEY---AELYRLLESR--PFP 153
L A GR R P++ LRA F+R Y A RL ++ P P
Sbjct: 72 LPAEARGRGRRRRLVWTPSQ-----SEALRA----CFERNPYPGIATRERLAQAIGIPEP 122
Query: 154 AAHHAFLQDLYLRARYHEAERA-----RGRALGAVDKYRLRKKFPLPKTIWDGEETVYCF 208
F + + R H E RG G R+K +T G +T
Sbjct: 123 RVQIWFQNERSRQLRQHRRESRPWPGRRGPPEG-------RRK----RTAVTGSQT---- 167
Query: 209 KERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTGAGGGAPCKS 268
A L + +R+P + LA TGL +++ WF+NRR R G GG AP ++
Sbjct: 168 -----ALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR-HPGQGGRAPAQA 221
Query: 269 ESDGNPTTEDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGPPAP-CPASSSILVNGSF 327
G + P AP A G+ GTG PAP P + L G+F
Sbjct: 222 ---GGLCSAAPGGGHP-------APSWVAFAHTGA---WGTGLPAPHVPCAPGALPQGAF 268
Query: 328 LAASGSPAVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLD 387
++ + A P + A P G P P P GA +
Sbjct: 269 VSQAARAA------PALQPSQAAPAEGVSQPAPARGDFAYAAPAP-PDGALSHPQAPRWP 321
Query: 388 PQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATFP---LPPGP 444
P G+ R + VA PGPA GP Q V PPT+ P GP
Sbjct: 322 PHPGKSREDRDPQRDGLPGPCAVAQPGPAQA----GPQGQGVLAPPTSQGSPWWGWGRGP 377
Query: 445 VPAVAA--PQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLP 488
A AA PQ PP P S ++ + + SQ + P
Sbjct: 378 QVAGAAWEPQAGAAPPPQPAPPDASASARQGQMQGIPAPSQALQEP 423
>gi|163914392 glioma tumor suppressor candidate region gene 1 [Homo
sapiens]
Length = 1560
Score = 60.1 bits (144), Expect = 7e-09
Identities = 116/433 (26%), Positives = 155/433 (35%), Gaps = 91/433 (21%)
Query: 307 AGTGPPAPCP-ASSSILVNGSFLAA----SGSPAVLLNGGPVIINGLALGEAS---SLGP 358
+ GP P AS+ + G+ L S + A LNG V A + S P
Sbjct: 265 SAAGPSEPVTLASAGVSPQGAGLVIQKNLSAAVATTLNGNSVFGGAGAASAPTGTPSGQP 324
Query: 359 LLLTGGGGAPPPQPSPQ-------GASETKTSLVLDPQT------------------GEV 393
L + G G+ P P+P + K + VL P+ GE
Sbjct: 325 LAVAPGLGSSPLVPAPNVILHRTPTPIQPKPAGVLPPKLYQLTPKPFAPAGATLTIQGEP 384
Query: 394 RLEEAQSEAPETKGAQVAA-----------PGPALGEEVLGPLAQVVPGPPTAATFPLPP 442
Q +AP+ A P PAL A V PP T PP
Sbjct: 385 GALPQQPKAPQNLTFMAAGKAGQNVVLSGFPAPALQ-------ANVFKQPPATTTGAAPP 437
Query: 443 GPVPAVAAPQVVPLSPP------------PGYPTGLSPTSPLLNLPQVVPTSQVVTLPQA 490
P A++ P V L PG L P +P + LPQ Q+ LP
Sbjct: 438 QPPGALSKPMSVHLLNQGSSIVIPAQHMLPGQNQFLLPGAPAVQLPQ-----QLSALPAN 492
Query: 491 VGPLQLLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFL-LANPVSGSP 549
VG L AA P + ++ A N +L L L AP + A+ +S +P
Sbjct: 493 VGGQILAAAAPHTGGQLIANPILTNQNLAGP------LSLGPVLAPHSGAHSAHILSAAP 546
Query: 550 IVTGV-AVQQGKIILTA-TFPTSMLVSQVLPPAP-------GLALPLKPETAISVPEGGL 600
I G A+ Q + L A + PT SQ P P G+ LP ++ P+G +
Sbjct: 547 IQVGQPALFQMPVSLAAGSLPTQ---SQPAPAGPAATTVLQGVTLPPSAVAMLNTPDGLV 603
Query: 601 -PVAPSPALPEAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGLLPNFPAPPPEGLMLSP 659
P P+ A EA + T+ QP P A ST LP P AP P+
Sbjct: 604 QPATPAAATGEAAPVLTV---QPAPQAPPAVSTPLPLGLQQPQAQQPPQAPTPQAAAPPQ 660
Query: 660 AAVPVWSAGLELS 672
A P S GL S
Sbjct: 661 ATTPQPSPGLASS 673
Score = 56.2 bits (134), Expect = 1e-07
Identities = 105/411 (25%), Positives = 149/411 (36%), Gaps = 99/411 (24%)
Query: 367 APPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLA 426
APPP P A+ L PQ + S+A Q+ A P G
Sbjct: 726 APPPAQDPAPATPVAKGAGLGPQAPD-------SQASPAPAPQIPAAAPLKG-------- 770
Query: 427 QVVPGPPTAATFP--LPPGPVPAVAAPQVV-PLSPPPGYPTGLS--PTSPLLNL---PQV 478
PGP ++ + P P G P + +P P S PP P +S P+ P L+ PQ
Sbjct: 771 ---PGPSSSPSLPHQAPLGDSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPCPPPQA 827
Query: 479 VPTSQVVTL---------------PQAVGP----LQLLAAGPGSPVKVAAAAGPANVHLI 519
PT + + P A GP L+ + P P+ A P++
Sbjct: 828 PPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQPPLRPQSQPPEGPLPPAPHLPPSSTSSA 887
Query: 520 NSGVGVTALQLPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILTATFPTSMLVSQVLPP 579
+ T+ +LP+ T P +F L P S P + PT LV P
Sbjct: 888 VASSSETSSRLPAPT-PSDFQLQFPPSQGPHKSPTPP-----------PTLHLV-----P 930
Query: 580 APGLALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQP-----------PPAAAT 628
P P P T V P PALP+ AL Q P PAA
Sbjct: 931 EPAAPPPPPPRTFQMV------TTPFPALPQPKALLERFHQVPSGIILQNKAGGAPAAPQ 984
Query: 629 TSSTSLPFSPDSPGLLPNFPAP--PPEGLMLSPAAVPVWSAGLELSAGTEGLLEAE-KGL 685
TS++ P + + +L + AP P +PA P+ + GL LL AE K
Sbjct: 985 TSTSLGPLTSPAASVLVSGQAPSGTPTAPSHAPAPAPMAATGL------PPLLPAENKAF 1038
Query: 686 GTQAPHTVLRLPDPDPEGLLLGATAGGEVDEGLEAEAKVLTQLQSVPVEEP 736
+ P + A++G GL+ E+K L+ L+ P +P
Sbjct: 1039 ASNLPTL----------NVAKAASSGPGKPSGLQYESK-LSGLKKPPTLQP 1078
Score = 53.1 bits (126), Expect = 9e-07
Identities = 109/451 (24%), Positives = 155/451 (34%), Gaps = 76/451 (16%)
Query: 269 ESDGNPTTEDESSRSPE-DLERGAAPVSAEAAAQGSIFLAGTGPPAPCPASSSILVNGSF 327
E+ GN + + +P DL+ + A G +G G PC L +
Sbjct: 55 EASGNHLNPEPNQPAPSVDLDFLEDDILGSPATGGGGGGSG-GADQPCDILQQSLQEANI 113
Query: 328 LAASGSPAVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLD 387
+ L+ GP + L + + GP TG GGA PQ T L+
Sbjct: 114 TEQTLEAEAELDLGPFQLPTLQPADGGA-GP---TGAGGAAAVAAGPQALFPGSTDLL-- 167
Query: 388 PQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATFPLPPG---- 443
G Q P L + L P VV + F P G
Sbjct: 168 -------------------GLQ--GPPTVLTHQALVPPQDVVNKALSVQPFLQPVGLGNV 206
Query: 444 ---PVPAVAAPQVVPLSPPPGYPTGLSPTSPLLNLPQVV-----PTSQVVTLPQAVGPLQ 495
P+P + Q +P P G +P+ + Q V PTSQ++ V
Sbjct: 207 TLQPIPGL---QGLPNGSPGGATAATLGLAPIQVVGQPVMALNTPTSQLLAKQVPVSGYL 263
Query: 496 LLAAGPGSPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFLLANPVSGSPIVTGVA 555
AAGP PV +A+A + G G+ + SA +A ++G+ + G
Sbjct: 264 ASAAGPSEPVTLASAG------VSPQGAGLVIQKNLSAA------VATTLNGNSVFGGAG 311
Query: 556 VQQGKIILTATFPTSMLVSQVLPPAPGL-ALPLKPETAISVPEGGLPVAPSPALPEAHAL 614
A+ PT Q L APGL + PL P + + P+ P PA L
Sbjct: 312 --------AASAPTGTPSGQPLAVAPGLGSSPLVPAPNVILHRTPTPIQPKPAGVLPPKL 363
Query: 615 GTLSAQQPPPAAATTSSTSLPFSPDSPGLLPNFPAPPPEGLMLSPAAVPVWSAGLELSAG 674
L+ + PA AT + PG LP P P L+ A + LS
Sbjct: 364 YQLTPKPFAPAGATLTIQG------EPGALPQQPKAPQN---LTFMAAGKAGQNVVLSGF 414
Query: 675 TEGLLEAEKGLGTQAPHTVLRLPDPDPEGLL 705
L+A + Q P T P P G L
Sbjct: 415 PAPALQA--NVFKQPPATTTGAAPPQPPGAL 443
Score = 50.8 bits (120), Expect = 4e-06
Identities = 104/415 (25%), Positives = 146/415 (35%), Gaps = 80/415 (19%)
Query: 293 PVSAEAAAQGSIFLAGTGPPAPCPASSSILVNGSFLAASGSPAVLLNGGPVIINGLALGE 352
PVS A + L PAP +++ ++ G L S +LN ++
Sbjct: 558 PVSLAAGS-----LPTQSQPAPAGPAATTVLQGVTLPPSA--VAMLNTPDGLVQPATPAA 610
Query: 353 ASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPETKGAQVAA 412
A+ +LT QP+PQ T L L Q + + + P+ Q AA
Sbjct: 611 ATGEAAPVLT-------VQPAPQAPPAVSTPLPLGLQQPQAQ------QPPQAPTPQAAA 657
Query: 413 PGPALGEEVLGPLA----QVVPGPPTAAT--------------------FPLPP-GPVPA 447
P A + LA ++V G P +AT PL GP +
Sbjct: 658 PPQATTPQPSPGLASSPEKIVLGQPPSATPTAILTQDSLQMFLPQERSQQPLSAEGPHLS 717
Query: 448 VAAPQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKV 507
V A +V PP P +P + L P SQ P P GPG
Sbjct: 718 VPASVIVSAPPPAQDPAPATPVAKGAGLGPQAPDSQASPAPAPQIPAAAPLKGPG----- 772
Query: 508 AAAAGPANVHLINSGVGVTALQLPSATAPGNFLLANPVSGS-----------------PI 550
++ P+ H G L P T P + + P S S P
Sbjct: 773 -PSSSPSLPHQAPLG-DSPHLPSPHPTRPPSRPPSRPQSVSRPPSEPPLHPCPPPQAPPT 830
Query: 551 VTGVAVQQGKIILTATFPTSMLVSQVLPPAPGLAL-PLKPETAISVPEGGLPVAPS-PAL 608
+ G+ V Q ++ + S P APG PL+P++ PEG LP AP P
Sbjct: 831 LPGIFVIQNQLGVPPP------ASNPAPTAPGPPQPPLRPQS--QPPEGPLPPAPHLPPS 882
Query: 609 PEAHALGTLSAQQPPPAAATTSSTSLPFSPDSPGLLPNFPAPPPEGLMLSPAAVP 663
+ A+ + S A T S L F P S G + PP L+ PAA P
Sbjct: 883 STSSAVASSSETSSRLPAPTPSDFQLQF-PPSQGPHKSPTPPPTLHLVPEPAAPP 936
Score = 32.3 bits (72), Expect = 1.6
Identities = 29/89 (32%), Positives = 38/89 (42%), Gaps = 20/89 (22%)
Query: 5 PAEPSAGPAAGG---------EAVAAAAATEEEEEEARQL------LQTLQAAEGEAAAA 49
PA G +GG +++ A TE+ E +L L TLQ A+G A
Sbjct: 85 PATGGGGGGSGGADQPCDILQQSLQEANITEQTLEAEAELDLGPFQLPTLQPADGGAGPT 144
Query: 50 AGAGAGAAAAGAEG--PGSP---GVPGSP 73
GA A AAG + PGS G+ G P
Sbjct: 145 GAGGAAAVAAGPQALFPGSTDLLGLQGPP 173
Score = 30.4 bits (67), Expect = 6.2
Identities = 57/219 (26%), Positives = 75/219 (34%), Gaps = 43/219 (19%)
Query: 308 GTGPPAPC--PASSSILVNGSFLAASGSPAVLLNGGPVIINGLALGEASSLGP--LLLTG 363
G PPAP P+S+S V S +S PA + + S P L L
Sbjct: 871 GPLPPAPHLPPSSTSSAVASSSETSSRLPAPTPSDFQLQFPPSQGPHKSPTPPPTLHLVP 930
Query: 364 GGGAPPPQPSPQGASETKTSLVLDPQTGEV--RLEEAQS------------EAPETKGAQ 409
APPP P P+ T PQ + R + S AP+T +
Sbjct: 931 EPAAPPPPP-PRTFQMVTTPFPALPQPKALLERFHQVPSGIILQNKAGGAPAAPQTSTSL 989
Query: 410 VAAPGPALGEEVLGPLAQVVPGPPTAATFPLPPGPVPAVAAPQVVP-------------- 455
PA V G Q G PTA + P P+ A P ++P
Sbjct: 990 GPLTSPAASVLVSG---QAPSGTPTAPSHAPAPAPMAATGLPPLLPAENKAFASNLPTLN 1046
Query: 456 ----LSPPPGYPTGLSPTSPLLNL---PQVVPTSQVVTL 487
S PG P+GL S L L P + P+ + L
Sbjct: 1047 VAKAASSGPGKPSGLQYESKLSGLKKPPTLQPSKEACFL 1085
>gi|194272217 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 60.1 bits (144), Expect = 7e-09
Identities = 122/466 (26%), Positives = 166/466 (35%), Gaps = 75/466 (16%)
Query: 43 EGEAAAAAGAGAGAAAAGAEGPGSPGVPGSPPEAASEPPTGLRFSPEQVACVC----EAL 98
+G A AG AA A V GSPP + P+ ++F P A ++
Sbjct: 13 QGRLAGWLAVRAGLLAAPAAVHSPAEVHGSPPASLCPRPS-VKFRPGLTAMALPTPSDST 71
Query: 99 LQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEY---AELYRLLESR--PFP 153
L A GR R P++ LRA F+R Y A RL ++ P P
Sbjct: 72 LPAEARGRGRRRRLVWTPSQ-----SEALRA----CFERNPYPGIATRERLAQAIGIPEP 122
Query: 154 AAHHAFLQDLYLRARYHEAERA-----RGRALGAVDKYRLRKKFPLPKTIWDGEETVYCF 208
F + + R H E RG G R+K +T G +T
Sbjct: 123 RVQIWFQNERSRQLRQHRRESRPWPGRRGPPEG-------RRK----RTAVTGSQT---- 167
Query: 209 KERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTGAGGGAPCKS 268
A L + +R+P + LA TGL +++ WF+NRR R G GG AP ++
Sbjct: 168 -----ALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR-HPGQGGRAPAQA 221
Query: 269 ESDGNPTTEDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGPPAP-CPASSSILVNGSF 327
G + P AP A G+ GTG PAP P + L G+F
Sbjct: 222 ---GGLCSAAPGGGHP-------APSWVAFAHTGA---WGTGLPAPHVPCAPGALPQGAF 268
Query: 328 LAASGSPAVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLD 387
++ + A P + A P G P P P GA +
Sbjct: 269 VSQAARAA------PALQPSQAAPAEGVSQPAPARGDFAYAAPAP-PDGALSHPQAPRWP 321
Query: 388 PQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATFP---LPPGP 444
P G+ R + VA PGPA GP Q V PPT+ P GP
Sbjct: 322 PHPGKSREDRDPQRDGLPGPCAVAQPGPAQA----GPQGQGVLAPPTSQGSPWWGWGRGP 377
Query: 445 VPAVAA--PQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLP 488
A AA PQ PP P S ++ + + SQ + P
Sbjct: 378 QVAGAAWEPQAGAAPPPQPAPPDASASARQGQMQGIPAPSQALQEP 423
>gi|194272216 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 60.1 bits (144), Expect = 7e-09
Identities = 122/466 (26%), Positives = 166/466 (35%), Gaps = 75/466 (16%)
Query: 43 EGEAAAAAGAGAGAAAAGAEGPGSPGVPGSPPEAASEPPTGLRFSPEQVACVC----EAL 98
+G A AG AA A V GSPP + P+ ++F P A ++
Sbjct: 13 QGRLAGWLAVRAGLLAAPAAVHSPAEVHGSPPASLCPRPS-VKFRPGLTAMALPTPSDST 71
Query: 99 LQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEY---AELYRLLESR--PFP 153
L A GR R P++ LRA F+R Y A RL ++ P P
Sbjct: 72 LPAEARGRGRRRRLVWTPSQ-----SEALRA----CFERNPYPGIATRERLAQAIGIPEP 122
Query: 154 AAHHAFLQDLYLRARYHEAERA-----RGRALGAVDKYRLRKKFPLPKTIWDGEETVYCF 208
F + + R H E RG G R+K +T G +T
Sbjct: 123 RVQIWFQNERSRQLRQHRRESRPWPGRRGPPEG-------RRK----RTAVTGSQT---- 167
Query: 209 KERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTGAGGGAPCKS 268
A L + +R+P + LA TGL +++ WF+NRR R G GG AP ++
Sbjct: 168 -----ALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR-HPGQGGRAPAQA 221
Query: 269 ESDGNPTTEDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGPPAP-CPASSSILVNGSF 327
G + P AP A G+ GTG PAP P + L G+F
Sbjct: 222 ---GGLCSAAPGGGHP-------APSWVAFAHTGA---WGTGLPAPHVPCAPGALPQGAF 268
Query: 328 LAASGSPAVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLD 387
++ + A P + A P G P P P GA +
Sbjct: 269 VSQAARAA------PALQPSQAAPAEGVSQPAPARGDFAYAAPAP-PDGALSHPQAPRWP 321
Query: 388 PQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATFP---LPPGP 444
P G+ R + VA PGPA GP Q V PPT+ P GP
Sbjct: 322 PHPGKSREDRDPQRDGLPGPCAVAQPGPAQA----GPQGQGVLAPPTSQGSPWWGWGRGP 377
Query: 445 VPAVAA--PQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLP 488
A AA PQ PP P S ++ + + SQ + P
Sbjct: 378 QVAGAAWEPQAGAAPPPQPAPPDASASARQGQMQGIPAPSQALQEP 423
>gi|194272215 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 60.1 bits (144), Expect = 7e-09
Identities = 122/466 (26%), Positives = 166/466 (35%), Gaps = 75/466 (16%)
Query: 43 EGEAAAAAGAGAGAAAAGAEGPGSPGVPGSPPEAASEPPTGLRFSPEQVACVC----EAL 98
+G A AG AA A V GSPP + P+ ++F P A ++
Sbjct: 13 QGRLAGWLAVRAGLLAAPAAVHSPAEVHGSPPASLCPRPS-VKFRPGLTAMALPTPSDST 71
Query: 99 LQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEY---AELYRLLESR--PFP 153
L A GR R P++ LRA F+R Y A RL ++ P P
Sbjct: 72 LPAEARGRGRRRRLVWTPSQ-----SEALRA----CFERNPYPGIATRERLAQAIGIPEP 122
Query: 154 AAHHAFLQDLYLRARYHEAERA-----RGRALGAVDKYRLRKKFPLPKTIWDGEETVYCF 208
F + + R H E RG G R+K +T G +T
Sbjct: 123 RVQIWFQNERSRQLRQHRRESRPWPGRRGPPEG-------RRK----RTAVTGSQT---- 167
Query: 209 KERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTGAGGGAPCKS 268
A L + +R+P + LA TGL +++ WF+NRR R G GG AP ++
Sbjct: 168 -----ALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR-HPGQGGRAPAQA 221
Query: 269 ESDGNPTTEDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGPPAP-CPASSSILVNGSF 327
G + P AP A G+ GTG PAP P + L G+F
Sbjct: 222 ---GGLCSAAPGGGHP-------APSWVAFAHTGA---WGTGLPAPHVPCAPGALPQGAF 268
Query: 328 LAASGSPAVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLD 387
++ + A P + A P G P P P GA +
Sbjct: 269 VSQAARAA------PALQPSQAAPAEGVSQPAPARGDFAYAAPAP-PDGALSHPQAPRWP 321
Query: 388 PQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATFP---LPPGP 444
P G+ R + VA PGPA GP Q V PPT+ P GP
Sbjct: 322 PHPGKSREDRDPQRDGLPGPCAVAQPGPAQA----GPQGQGVLAPPTSQGSPWWGWGRGP 377
Query: 445 VPAVAA--PQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLP 488
A AA PQ PP P S ++ + + SQ + P
Sbjct: 378 QVAGAAWEPQAGAAPPPQPAPPDASASARQGQMQGIPAPSQALQEP 423
>gi|194272192 double homeobox, 4-like [Homo sapiens]
Length = 485
Score = 60.1 bits (144), Expect = 7e-09
Identities = 122/466 (26%), Positives = 166/466 (35%), Gaps = 75/466 (16%)
Query: 43 EGEAAAAAGAGAGAAAAGAEGPGSPGVPGSPPEAASEPPTGLRFSPEQVACVC----EAL 98
+G A AG AA A V GSPP + P+ ++F P A ++
Sbjct: 13 QGRLAGWLAVRAGLLAAPAAVHSPAEVHGSPPASLCPRPS-VKFRPGLTAMALPTPSDST 71
Query: 99 LQAGHAGRLSRFLGALPPAERLRGSDPVLRARALVAFQRGEY---AELYRLLESR--PFP 153
L A GR R P++ LRA F+R Y A RL ++ P P
Sbjct: 72 LPAEARGRGRRRRLVWTPSQ-----SEALRA----CFERNPYPGIATRERLAQAIGIPEP 122
Query: 154 AAHHAFLQDLYLRARYHEAERA-----RGRALGAVDKYRLRKKFPLPKTIWDGEETVYCF 208
F + + R H E RG G R+K +T G +T
Sbjct: 123 RVQIWFQNERSRQLRQHRRESRPWPGRRGPPEG-------RRK----RTAVTGSQT---- 167
Query: 209 KERSRAALKACYRGNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTGAGGGAPCKS 268
A L + +R+P + LA TGL +++ WF+NRR R G GG AP ++
Sbjct: 168 -----ALLLRAFEKDRFPGIAAREELARETGLPESRIQIWFQNRRAR-HPGQGGRAPAQA 221
Query: 269 ESDGNPTTEDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGPPAP-CPASSSILVNGSF 327
G + P AP A G+ GTG PAP P + L G+F
Sbjct: 222 ---GGLCSAAPGGGHP-------APSWVAFAHTGA---WGTGLPAPHVPCAPGALPQGAF 268
Query: 328 LAASGSPAVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLD 387
++ + A P + A P G P P P GA +
Sbjct: 269 VSQAARAA------PALQPSQAAPAEGVSQPAPARGDFAYAAPAP-PDGALSHPQAPRWP 321
Query: 388 PQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATFP---LPPGP 444
P G+ R + VA PGPA GP Q V PPT+ P GP
Sbjct: 322 PHPGKSREDRDPQRDGLPGPCAVAQPGPAQA----GPQGQGVLAPPTSQGSPWWGWGRGP 377
Query: 445 VPAVAA--PQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLP 488
A AA PQ PP P S ++ + + SQ + P
Sbjct: 378 QVAGAAWEPQAGAAPPPQPAPPDASASARQGQMQGIPAPSQALQEP 423
>gi|91982772 mucin 17 [Homo sapiens]
Length = 4493
Score = 59.7 bits (143), Expect = 1e-08
Identities = 84/384 (21%), Positives = 148/384 (38%), Gaps = 43/384 (11%)
Query: 275 TTEDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGPPAPCPASSSILVNGSFLAASGSP 334
TT E++ SP E + P S + GT P P S +++ N S +P
Sbjct: 2252 TTSTEATSSPTTAEGTSIPTSTLSE--------GTTPLTSIPVSHTLVANSEVSTLSTTP 2303
Query: 335 AVLLNGGPVIINGLALGEASSLGPLLLTGGGGAPPPQPSPQGASE-----TKTSLVLDPQ 389
+ P + EASS P T G + P S +G + T++V +
Sbjct: 2304 VD--SNTPFTTST----EASSPPP---TAEGTSMPTSTSSEGNTPLTRMPVSTTMVASFE 2354
Query: 390 TGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATFPLPPGPVPAVA 449
T + A + P T +Q A P ++ P + G + P+ +P V+
Sbjct: 2355 TSTLSTTPADTSTPVTTYSQ-AGSSPTTADDTSMPTSTYSEGSTPLTSVPV--STMPVVS 2411
Query: 450 APQVVPLSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAA 509
+ + P T ++ ++ + P + + T P + G L + + V++
Sbjct: 2412 SEASTHSTTPVDTSTPVTTSTEASSSPTTAEGTSIPTSPPSEGTTPLASMPVSTTPVVSS 2471
Query: 510 AAGPANVHLINSGVGVTA-------------LQLPSATAP-GNFLLAN-PVSGSPIVTGV 554
AG + +++ +T + +P +TA G+ LL + PVS +P+ +
Sbjct: 2472 EAGTLSTTPVDTSTPMTTSTEASSSPTTAEDIVVPISTASEGSTLLTSIPVSTTPVASPE 2531
Query: 555 AVQQGKIILTATFP--TSMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSP-ALPEA 611
A + + P TS +S A G ++P + S P +PV+ P A EA
Sbjct: 2532 ASTLSTTPVDSNSPVVTSTEISSSATSAEGTSMPTSTYSEGSTPLRSMPVSTKPLASSEA 2591
Query: 612 HALGTLSAQQPPPAAATTSSTSLP 635
L T P +T ++S P
Sbjct: 2592 STLSTTPVDTSIPVTTSTETSSSP 2615
Score = 55.8 bits (133), Expect = 1e-07
Identities = 88/400 (22%), Positives = 147/400 (36%), Gaps = 36/400 (9%)
Query: 268 SESDGNPTTEDESSRSPEDLERGAAPVSAEAAAQGSIFLAGTGPPAPCPASSSILVNGSF 327
+E+ +PTT + +S + P+++ + + G + P +S V S
Sbjct: 2786 TEASSSPTTAEVTSMPTSTPSETSTPLTSMPVNHTPVASSEAGTLSTTPVDTSTPVTTST 2845
Query: 328 LAASGSPAVLLNGGPVIINGLALG-EASSLGPLLLTGGGGAPPPQPSPQGASETKT--SL 384
A+S P G+ + +S G LLT + P +P +SE T +
Sbjct: 2846 KASSS---------PTTAEGIVVPISTASEGSTLLT----SIPVSTTPVASSEASTLSTT 2892
Query: 385 VLDPQTGEVRLEEAQSEAPETKGAQVAAPGPALGEEVLGPLAQV-VPGPPTAATFPLPPG 443
+D E S +G + P+ EV PL + V P A +
Sbjct: 2893 PVDTSIPVTTSTEGSSSPTTAEGTSMPISTPS---EVSTPLTSILVSTVPVAGSEASTLS 2949
Query: 444 PVPAVAAPQVVPLSPPPGYPTGLSPTSPLLNLP----QVVPTSQVVTLPQAVGPLQLLAA 499
P V + PT TS ++ P + + V T+P A L+
Sbjct: 2950 TTPVDTRTPVTTSAEASSSPTTAEGTSMPISTPGERRTPLTSMSVSTMPVASSEASTLSR 3009
Query: 500 GPG---SPVKVAAAAGPANVHLINSGVGVTALQLPSATAPGNFLLANPVSGSPIVTGVAV 556
P +PV + A + +G+ ++ S L + PVS +P+ A
Sbjct: 3010 TPADTSTPVTTSTEASSSPTTAEGTGIPISTPSEGSTP-----LTSIPVSTTPVAIPEAS 3064
Query: 557 QQGKIILTATFP--TSMLVSQVLPPAPGLALPLKPETAISVPEGGLPVAPSPALPEAHAL 614
+ + P TS VS PA G ++P+ + S P G+PV+ +P + A+
Sbjct: 3065 TLSTTPVDSNSPVVTSTEVSSSPTPAEGTSMPISTYSEGSTPLTGVPVSTTPV--TSSAI 3122
Query: 615 GTLSAQQPPPAAATTSSTSLPFSPDSPGLLPNFPAPPPEG 654
TLS + T+ST SP + + P EG
Sbjct: 3123 STLSTTPVDTSTPVTTSTEAHSSPTTSEGTSMPTSTPSEG 3162
Score = 42.7 bits (99), Expect = 0.001
Identities = 83/441 (18%), Positives = 152/441 (34%), Gaps = 43/441 (9%)
Query: 227 TPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTGAGGGAPCKSESDGNPTTEDESSRSPED 286
TP E+R T +S V++ + R +E+ +PTT + +
Sbjct: 2981 TPGERRTPLTSMSVSTMPVASSEASTLSRTPADTSTPVTTSTEASSSPTTAEGTGIPIST 3040
Query: 287 LERGAAPVSAEAAAQGSIFLAGTGPPAPCPA-SSSILVNGSFLAASGSPAVLLNGGPVII 345
G+ P+++ + + + + P S+S +V + +++S +PA G + I
Sbjct: 3041 PSEGSTPLTSIPVSTTPVAIPEASTLSTTPVDSNSPVVTSTEVSSSPTPA---EGTSMPI 3097
Query: 346 NGLALGEASSLGPLLLTGGGGAPPPQPSPQGASETKTSLVLDPQTGEVRLEEAQSEAPET 405
+ + G G + T P A T ++ +D T EA S +
Sbjct: 3098 STYSEGSTPLTGVPVST--------TPVTSSAISTLSTTPVDTSTPVTTSTEAHSSPTTS 3149
Query: 406 KGAQVAAPGPALGEEVLG--PLAQVVPGPPTAATFPLPPGPVPAVAAPQVVPLSPPPGYP 463
+G + P+ G L P++ ++ +T P S
Sbjct: 3150 EGTSMPTSTPSEGSTPLTYMPVSTMLVVSSEDSTLSATPVDTSTPVTTSTEATSSTTAEG 3209
Query: 464 TGLSPTSPLLNLPQV--VPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPANVHLINS 521
T + ++P + + VP S L +P+ + A +S
Sbjct: 3210 TSIPTSTPSEGMTPLTSVPVSNTPVASSEASILSTTPVDSNTPLTTSTEAS-------SS 3262
Query: 522 GVGVTALQLPSATAPGNFLLANPVSGSPI-VTGVAVQQGKIILTATFPTSMLV------S 574
+P++T + P++ P+ T VA + + T TS V S
Sbjct: 3263 PPTAEGTSMPTSTPSEG---STPLTSMPVSTTTVASSETSTLSTTPADTSTPVTTYSQAS 3319
Query: 575 QVLPPAPGLALPLKPETAISVPEGGLPVAPSPAL-PEAHALGTLSAQQPPPAAATTSS-- 631
P A G ++P + S P + + +P + EA L T P +T +
Sbjct: 3320 SSPPIADGTSMPTSTYSEGSTPLTNMSFSTTPVVSSEASTLSTTPVDTSTPVTTSTEASL 3379
Query: 632 -------TSLPFSPDSPGLLP 645
TS+P S S G P
Sbjct: 3380 SPTTAEGTSIPTSSPSEGTTP 3400
Score = 42.0 bits (97), Expect = 0.002
Identities = 85/440 (19%), Positives = 146/440 (33%), Gaps = 32/440 (7%)
Query: 222 GNRYPTPDEKRRLATLTGLSLTQVSNWFKNRRQRDRTGAGGGAPC--KSESDGNPTTEDE 279
G PT + LT + ++ T P +E+ +P T +
Sbjct: 3209 GTSIPTSTPSEGMTPLTSVPVSNTPVASSEASILSTTPVDSNTPLTTSTEASSSPPTAEG 3268
Query: 280 SSRSPEDLERGAAPVSAEAAAQGSIFLAGTGPPAPCPASSSILVNGSFLAASGSPAVLLN 339
+S G+ P+++ + ++ + T + PA +S V ++ AS SP
Sbjct: 3269 TSMPTSTPSEGSTPLTSMPVSTTTVASSETSTLSTTPADTSTPVT-TYSQASSSPP---- 3323
Query: 340 GGPVIINGLALGEAS-SLGPLLLTGGGGAPPPQPSPQGASETKTSLVLDPQTGEVRLEEA 398
I +G ++ ++ S G LT + P S + ++ + T + D T EA
Sbjct: 3324 ----IADGTSMPTSTYSEGSTPLTNMSFSTTPVVSSEASTLSTTPV--DTSTPVTTSTEA 3377
Query: 399 QSEAPETKGAQVAAPGPALGEEVLGPLAQVVPGPPTAATFPLPPGPVPA---VAAPQVVP 455
+G + P+ G L + ++ L PV + V
Sbjct: 3378 SLSPTTAEGTSIPTSSPSEGTTPLASMPVSTTPVVSSEVNTLSTTPVDSNTLVTTSTEAS 3437
Query: 456 LSPPPGYPTGLSPTSPLLNLPQVVPTSQVVTLPQAVGPLQLLAAGPGSPVKVAAAAGPAN 515
SP T L PTS + + T P A L+ P + P N
Sbjct: 3438 SSPTIAEGTSL-PTSTTSEGSTPLSIMPLSTTPVASSEASTLSTTPVDTSTPVTTSSPTN 3496
Query: 516 ----------VHLINSGVGVTAL-QLPSATAPGNFLLANPVSGSPIVTGVAVQQGKIILT 564
+ +G G T L +P +T P A+ +S +P+ + V +
Sbjct: 3497 SSPTTAEVTSMPTSTAGEGSTPLTNMPVSTTPVASSEASTLSTTPVDSNTFVTSSSQASS 3556
Query: 565 ATFPTSMLVSQVLPPAPG---LALPLKPETAISVPEGGLPVAPSPALPEAHALGTLSAQQ 621
+ + ++ P+ G L L T ++ E P PS T S
Sbjct: 3557 SPATLQVTTMRMSTPSEGSSSLTTMLLSSTYVTSSEASTPSTPSVDRSTPVTTSTQSNST 3616
Query: 622 PPPAAATTSSTSLPFSPDSP 641
P P T S P +P
Sbjct: 3617 PTPPEVITLPMSTPSEVSTP 3636
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.131 0.383
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,193,600
Number of Sequences: 37866
Number of extensions: 2551341
Number of successful extensions: 31075
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 495
Number of HSP's successfully gapped in prelim test: 1517
Number of HSP's that attempted gapping in prelim test: 16603
Number of HSP's gapped (non-prelim): 11906
length of query: 739
length of database: 18,247,518
effective HSP length: 110
effective length of query: 629
effective length of database: 14,082,258
effective search space: 8857740282
effective search space used: 8857740282
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.