Guide to the Human Genome
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Name: RIPK3 Sequence: fasta or formatted (518aa) NCBI GI: 40254844
Description:

receptor-interacting serine-threonine kinase 3

Referenced in:

Additional Serine / Threonine Protein Kinases

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         27           2
 C cysteine            1.7          9           1
 D aspartate           3.3         17           1
 E glutamate           7.3         38           2
 F phenylalanine       2.9         15           1
 G glycine             8.7         45           2
 H histidine           1.4          7           1
 I isoleucine          1.5          8           1
 K lysine              4.6         24           2
 L leucine             9.7         50           2
 M methionine          2.7         14           1
 N asparagine          5.4         28           2
 P proline             9.3         48           3
 Q glutamine           5.8         30           2
 R arginine            5.2         27           2
 S serine              9.1         47           2
 T threonine           5.2         27           2
 V valine              7.1         37           2
 W tryptophan          2.3         12           1
 Y tyrosine            1.5          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   receptor-interacting serine-threonine kinase 3 [Homo... 
RIPK4                 0.121   ankyrin repeat domain 3 
RIPK2                 0.115   receptor-interacting serine-threonine kinase 2 
RIPK1                 0.111   receptor (TNFRSF)-interacting serine-threonine kinas...
ANKK1                 0.105   ankyrin repeat and kinase domain containing 1 
ACVR2A                0.079   activin A receptor, type IIA precursor 
KIAA1804              0.079   mixed lineage kinase 4 
MAP3K7                0.078   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.078   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.077   mitogen-activated protein kinase kinase kinase 7 iso...
MAP3K7                0.077   mitogen-activated protein kinase kinase kinase 7 isof...
TNNI3K                0.077   TNNI3 interacting kinase isoform b 
TNNI3K                0.077   TNNI3 interacting kinase isoform a 
MAP3K9                0.075   mitogen-activated protein kinase kinase kinase 9 [Ho...
MAP3K10               0.074   mitogen-activated protein kinase kinase kinase 10 [H...
EPHB1                 0.073   ephrin receptor EphB1 precursor 
MAP3K11               0.073   mitogen-activated protein kinase kinase kinase 11 [Ho...
ACVR2B                0.073   activin A receptor, type IIB precursor 
EPHA2                 0.072   ephrin receptor EphA2 
EPHA1                 0.072   ephrin receptor EphA1 
ZAK                   0.069   MLK-related kinase isoform 2 
ZAK                   0.069   MLK-related kinase isoform 1 
EPHB2                 0.069   ephrin receptor EphB2 isoform 1 precursor 
EPHB2                 0.069   ephrin receptor EphB2 isoform 2 precursor 
MAP3K12               0.068   mitogen-activated protein kinase kinase kinase 12 [H...
RAF1                  0.068   v-raf-1 murine leukemia viral oncogene homolog 1 [Hom...
TEC                   0.067   tec protein tyrosine kinase 
SYK                   0.066   spleen tyrosine kinase isoform 2 
SYK                   0.066   spleen tyrosine kinase isoform 1 
TXK                   0.066   TXK tyrosine kinase 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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