Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: ZBTB25 Sequence: fasta or formatted (435aa) NCBI GI: 40217849
Description:

zinc finger protein 46

Referenced in:

Kruppel-related Zinc Finger Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.8         21           2
 C cysteine            3.2         14           1
 D aspartate           4.6         20           2
 E glutamate           7.1         31           2
 F phenylalanine       4.1         18           1
 G glycine             4.6         20           1
 H histidine           4.8         21           1
 I isoleucine          5.3         23           1
 K lysine              4.6         20           1
 L leucine             9.2         40           2
 M methionine          1.6          7           1
 N asparagine          4.1         18           1
 P proline             5.1         22           2
 Q glutamine           7.4         32           2
 R arginine            4.8         21           2
 S serine             10.8         47           2
 T threonine           5.5         24           2
 V valine              5.5         24           2
 W tryptophan          0.2          1           1
 Y tyrosine            2.5         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger protein 46 
ZBTB2                 0.256   zinc finger and BTB domain containing 2 
MYNN                  0.076   myoneurin 
ZBTB1                 0.073   zinc finger and BTB domain containing 1 isoform 1 [...
ZBTB1                 0.073   zinc finger and BTB domain containing 1 isoform 2 [...
ZBTB17                0.069   zinc finger and BTB domain containing 17 
ZFP161                0.055   zinc finger protein 161 homolog 
ZFP161                0.055   zinc finger protein 161 homolog 
ZNF238                0.055   zinc finger protein 238 isoform 2 
ZNF238                0.055   zinc finger protein 238 isoform 1 
ZBTB40                0.051   zinc finger and BTB domain containing 40 
ZBTB40                0.051   zinc finger and BTB domain containing 40 
NACC1                 0.050   transcriptional repressor NAC1 
ZBTB5                 0.050   zinc finger and BTB domain containing 5 
ZBTB42                0.050   zinc finger and BTB domain containing 42 
ZBTB8A                0.049   zinc finger and BTB domain containing 8A 
ZNF131                0.049   zinc finger protein 131 
HIC2                  0.049   hypermethylated in cancer 2 
ZBTB24                0.047   zinc finger and BTB domain containing 24 
HIC1                  0.045   hypermethylated in cancer 1 isoform 2 
HIC1                  0.045   hypermethylated in cancer 1 isoform 1 
ZBTB3                 0.045   zinc finger and BTB domain containing 3 
ZNF509                0.045   zinc finger protein 509 
SALL1                 0.041   sal-like 1 isoform b 
SALL1                 0.041   sal-like 1 isoform a 
ZBTB8B                0.040   zinc finger and BTB domain containing 8B 
ZNF295                0.040   zinc finger protein 295 isoform S 
ZNF295                0.040   zinc finger protein 295 isoform L 
ZNF295                0.040   zinc finger protein 295 isoform L 
ZBTB43                0.040   zinc finger and BTB domain containing 43 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press