Guide to the Human Genome
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Name: ZBTB1 Sequence: fasta or formatted (644aa) NCBI GI: 182509178
Description:

zinc finger and BTB domain containing 1 isoform 2

Referenced in:

Kruppel-related Zinc Finger Proteins

Other entries for this name:
alt prot [713aa] zinc finger and BTB domain containing 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.1         33           2
 C cysteine            4.7         30           2
 D aspartate           6.8         44           2
 E glutamate           9.3         60           2
 F phenylalanine       4.7         30           2
 G glycine             4.5         29           2
 H histidine           3.3         21           1
 I isoleucine          4.3         28           3
 K lysine              7.0         45           2
 L leucine             6.5         42           2
 M methionine          3.3         21           1
 N asparagine          5.4         35           2
 P proline             3.4         22           2
 Q glutamine           5.0         32           2
 R arginine            5.9         38           2
 S serine              9.6         62           3
 T threonine           4.3         28           2
 V valine              3.9         25           2
 W tryptophan          0.3          2           1
 Y tyrosine            2.6         17           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   zinc finger and BTB domain containing 1 isoform 2 [... 
ZBTB1                 0.982   zinc finger and BTB domain containing 1 isoform 1 [...
ZNF238                0.053   zinc finger protein 238 isoform 2 
ZNF238                0.053   zinc finger protein 238 isoform 1 
ZBTB17                0.053   zinc finger and BTB domain containing 17 
ZBTB25                0.048   zinc finger protein 46 
ZBTB2                 0.046   zinc finger and BTB domain containing 2 
ZBTB42                0.044   zinc finger and BTB domain containing 42 
ZNF568                0.044   zinc finger protein 568 
ZNF595                0.044   zinc finger protein 595 
ZBTB3                 0.042   zinc finger and BTB domain containing 3 
ZNF135                0.042   zinc finger protein 135 
ZNF484                0.041   zinc finger protein 484 isoform b 
ZNF484                0.041   zinc finger protein 484 isoform a 
ZNF623                0.041   zinc finger protein 623 isoform 1 
ZNF623                0.041   zinc finger protein 623 isoform 2 
ZNF7                  0.041   zinc finger protein 7 
ZNF652                0.041   zinc finger protein 652 
ZNF652                0.041   zinc finger protein 652 
ZNF480                0.041   zinc finger protein 480 
ZNF510                0.041   zinc finger protein 510 
ZNF175                0.041   zinc finger protein 175 
ZNF157                0.041   zinc finger protein 157 
ZNF649                0.041   zinc finger protein 649 
ZNF502                0.041   zinc finger protein 502 
ZNF502                0.041   zinc finger protein 502 
ZNF502                0.041   zinc finger protein 502 
ZNF502                0.041   zinc finger protein 502 
ZNF81                 0.041   zinc finger protein 81 
ZBTB41                0.041   zinc finger and BTB domain containing 41 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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