Guide to the Human Genome
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Name: TBRG4 Sequence: fasta or formatted (631aa) NCBI GI: 40217812
Description:

cell cycle progression 2 protein isoform 1

Referenced in:

Small RNAs in RNA Processing
Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt prot [521aa] cell cycle progression 2 protein isoform 2
alt prot [521aa] cell cycle progression 2 protein isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.5         60           2
 C cysteine            1.3          8           1
 D aspartate           3.8         24           1
 E glutamate           7.4         47           2
 F phenylalanine       3.6         23           2
 G glycine             4.4         28           2
 H histidine           4.3         27           1
 I isoleucine          2.2         14           1
 K lysine              6.0         38           2
 L leucine            17.4        110           2
 M methionine          1.7         11           2
 N asparagine          1.6         10           1
 P proline             5.4         34           3
 Q glutamine           5.4         34           2
 R arginine            4.9         31           2
 S serine              7.6         48           2
 T threonine           3.6         23           1
 V valine              6.3         40           1
 W tryptophan          1.6         10           1
 Y tyrosine            1.7         11           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cell cycle progression 2 protein isoform 1 
TBRG4                 0.438   cell cycle progression 2 protein isoform 2 
TBRG4                 0.438   cell cycle progression 2 protein isoform 2 
FASTKD3               0.075   FAST kinase domains 3 
FASTKD2               0.042   FAST kinase domains 2 
FASTKD2               0.042   FAST kinase domains 2 
FASTKD2               0.042   FAST kinase domains 2 
FASTKD1               0.036   FAST kinase domains 1 
FASTK                 0.036   Fas-activated serine/threonine kinase isoform 1 [Homo...
FASTK                 0.036   Fas-activated serine/threonine kinase isoform 4 [Hom...
FASTKD5               0.021   FAST kinase domains 5 
SYNE1                 0.006   spectrin repeat containing, nuclear envelope 1 isofo...
SYNE1                 0.006   spectrin repeat containing, nuclear envelope 1 isof...
LOC402509             0.005   PREDICTED: similar to solute carrier family 29 (nuc...
LOC402509             0.005   PREDICTED: similar to solute carrier family 29 (nuc...
RPS6KB2               0.005   ribosomal protein S6 kinase, 70kDa, polypeptide 2 [H...
NIPBL                 0.005   delangin isoform B 
NIPBL                 0.005   delangin isoform A 
FLJ43860              0.005   hypothetical protein LOC389690 
LOC100288255          0.004   PREDICTED: hypothetical protein XP_002343930 
ABCF2                 0.004   ATP-binding cassette, sub-family F, member 2 isoform...
ABCF2                 0.004   ATP-binding cassette, sub-family F, member 2 isoform...
MNT                   0.004   MAX binding protein 
FRG2                  0.004   FSHD region gene 2 
CELSR3                0.004   cadherin EGF LAG seven-pass G-type receptor 3 [Homo...
C15orf55              0.004   nuclear protein in testis 
FRG2B                 0.004   FSHD region gene 2 family, member B 
UBN1                  0.004   ubinuclein 1 
UBN1                  0.004   ubinuclein 1 
CARD14                0.004   caspase recruitment domain protein 14 isoform 1 [Hom...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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