Guide to the Human Genome
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Name: TBRG4 Sequence: fasta or formatted (521aa) NCBI GI: 40217810
Description:

cell cycle progression 2 protein isoform 2

Referenced in:

Small RNAs in RNA Processing
Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt mRNA [521aa] cell cycle progression 2 protein isoform 2
alt prot [631aa] cell cycle progression 2 protein isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         49           2
 C cysteine            1.2          6           1
 D aspartate           4.0         21           1
 E glutamate           8.1         42           2
 F phenylalanine       3.3         17           2
 G glycine             4.8         25           2
 H histidine           4.4         23           1
 I isoleucine          2.5         13           1
 K lysine              6.1         32           2
 L leucine            16.9         88           2
 M methionine          1.7          9           2
 N asparagine          1.7          9           1
 P proline             5.6         29           3
 Q glutamine           5.4         28           2
 R arginine            5.0         26           2
 S serine              7.1         37           2
 T threonine           3.6         19           1
 V valine              6.0         31           1
 W tryptophan          1.7          9           1
 Y tyrosine            1.5          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   cell cycle progression 2 protein isoform 2 
TBRG4                 1.000   cell cycle progression 2 protein isoform 2 
TBRG4                 0.530   cell cycle progression 2 protein isoform 1 
FASTKD3               0.051   FAST kinase domains 3 
FASTK                 0.050   Fas-activated serine/threonine kinase isoform 1 [Homo...
FASTKD1               0.044   FAST kinase domains 1 
FASTK                 0.039   Fas-activated serine/threonine kinase isoform 4 [Hom...
FASTKD5               0.012   FAST kinase domains 5 
C1orf65               0.012   hypothetical protein LOC164127 
MYH8                  0.010   myosin, heavy chain 8, skeletal muscle, perinatal [...
MYH2                  0.009   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH2                  0.009   myosin, heavy chain 2, skeletal muscle, adult [Homo...
MYH1                  0.008   myosin, heavy chain 1, skeletal muscle, adult [Homo...
MYH4                  0.008   myosin, heavy polypeptide 4, skeletal muscle 
MYH3                  0.007   myosin, heavy chain 3, skeletal muscle, embryonic [H...
TPR                   0.007   nuclear pore complex-associated protein TPR 
LOC402509             0.006   PREDICTED: similar to solute carrier family 29 (nuc...
LOC402509             0.006   PREDICTED: similar to solute carrier family 29 (nuc...
RPS6KB2               0.006   ribosomal protein S6 kinase, 70kDa, polypeptide 2 [H...
NIPBL                 0.006   delangin isoform B 
NIPBL                 0.006   delangin isoform A 
FLJ43860              0.006   hypothetical protein LOC389690 
LOC100288255          0.005   PREDICTED: hypothetical protein XP_002343930 
ABCF2                 0.005   ATP-binding cassette, sub-family F, member 2 isoform...
ABCF2                 0.005   ATP-binding cassette, sub-family F, member 2 isoform...
MNT                   0.005   MAX binding protein 
FRG2                  0.005   FSHD region gene 2 
CELSR3                0.005   cadherin EGF LAG seven-pass G-type receptor 3 [Homo...
C15orf55              0.005   nuclear protein in testis 
FRG2B                 0.005   FSHD region gene 2 family, member B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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