Guide to the Human Genome
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Name: FASTKD2 Sequence: fasta or formatted (710aa) NCBI GI: 209969830
Description:

FAST kinase domains 2

Referenced in:

Additional Serine / Threonine Protein Kinases

Other entries for this name:
alt mRNA [710aa] FAST kinase domains 2
alt mRNA [710aa] FAST kinase domains 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         37           2
 C cysteine            2.4         17           2
 D aspartate           5.8         41           2
 E glutamate           5.1         36           2
 F phenylalanine       5.4         38           2
 G glycine             2.7         19           2
 H histidine           3.2         23           1
 I isoleucine          5.5         39           2
 K lysine              6.8         48           2
 L leucine            13.5         96           2
 M methionine          3.8         27           2
 N asparagine          5.6         40           2
 P proline             3.1         22           1
 Q glutamine           3.7         26           2
 R arginine            4.8         34           1
 S serine              8.0         57           2
 T threonine           5.1         36           2
 V valine              7.2         51           2
 W tryptophan          0.8          6           1
 Y tyrosine            2.4         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   FAST kinase domains 2 
FASTKD2               1.000   FAST kinase domains 2 
FASTKD2               1.000   FAST kinase domains 2 
TBRG4                 0.037   cell cycle progression 2 protein isoform 1 
FASTKD3               0.030   FAST kinase domains 3 
FASTKD5               0.023   FAST kinase domains 5 
FASTKD1               0.023   FAST kinase domains 1 
TBRG4                 0.014   cell cycle progression 2 protein isoform 2 
TBRG4                 0.014   cell cycle progression 2 protein isoform 2 
FASTK                 0.007   Fas-activated serine/threonine kinase isoform 1 [Homo...
FASTK                 0.007   Fas-activated serine/threonine kinase isoform 4 [Hom...
UGCGL2                0.005   UDP-glucose ceramide glucosyltransferase-like 2 [Ho...
TRIP11                0.004   thyroid hormone receptor interactor 11 
MED12                 0.004   mediator complex subunit 12 
CCDC110               0.004   coiled-coil domain containing 110 isoform b 
PSMD5                 0.004   proteasome 26S non-ATPase subunit 5 
IQCH                  0.004   IQ motif containing H isoform 1 
C10orf129             0.004   acyl-coenzyme A synthetase ACSM6, mitochondrial [Ho...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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