Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 38788219
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38788219 zinc finger protein 428 [Homo sapiens]
(188 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38788219 zinc finger protein 428 [Homo sapiens] 403 e-113
gi|24431933 reticulon 4 isoform B [Homo sapiens] 52 4e-07
gi|47519490 reticulon 4 isoform D [Homo sapiens] 52 4e-07
gi|24431935 reticulon 4 isoform A [Homo sapiens] 52 4e-07
gi|23503317 coiled-coil domain containing 96 [Homo sapiens] 49 3e-06
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 48 4e-06
gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens] 48 4e-06
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 48 6e-06
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 47 1e-05
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 47 1e-05
gi|4557719 DNA ligase I [Homo sapiens] 46 2e-05
gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens] 46 2e-05
gi|45359846 Ras-GTPase activating protein SH3 domain-binding pro... 45 3e-05
gi|239757043 PREDICTED: functional smad suppressing element 18 [... 44 6e-05
gi|239751555 PREDICTED: functional smad suppressing element 18 [... 44 6e-05
gi|239746067 PREDICTED: functional smad suppressing element 18 [... 44 6e-05
gi|157266334 tubby like protein 1 [Homo sapiens] 44 6e-05
gi|23346412 cysteine-serine-rich nuclear protein 3 [Homo sapiens] 44 8e-05
gi|17975763 myelin transcription factor 1 [Homo sapiens] 44 8e-05
gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [H... 44 8e-05
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 44 1e-04
gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens] 44 1e-04
gi|122937229 zinc finger protein 629 [Homo sapiens] 44 1e-04
gi|14249488 zinc finger and SCAN domain containing 10 [Homo sapi... 44 1e-04
gi|223941846 zinc finger protein 652 [Homo sapiens] 43 1e-04
gi|7662384 zinc finger protein 652 [Homo sapiens] 43 1e-04
gi|31543392 peroxisome proliferator-activated receptor gamma, co... 43 1e-04
gi|5031855 lymphocyte cytosolic protein 2 [Homo sapiens] 43 2e-04
gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein ... 43 2e-04
gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens] 42 2e-04
>gi|38788219 zinc finger protein 428 [Homo sapiens]
Length = 188
Score = 403 bits (1036), Expect = e-113
Identities = 188/188 (100%), Positives = 188/188 (100%)
Query: 1 MTETREPAETGGYASLEEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPE 60
MTETREPAETGGYASLEEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPE
Sbjct: 1 MTETREPAETGGYASLEEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPE 60
Query: 61 YDPGYKVKQRLGGGRGGPSRRAPRAAQPPAQPCQLCGRSPLGEAPPGTPPCRLCCPATAP 120
YDPGYKVKQRLGGGRGGPSRRAPRAAQPPAQPCQLCGRSPLGEAPPGTPPCRLCCPATAP
Sbjct: 61 YDPGYKVKQRLGGGRGGPSRRAPRAAQPPAQPCQLCGRSPLGEAPPGTPPCRLCCPATAP 120
Query: 121 QEAPAPEGRALGEEEEEPPRAGEGRPAGREEEEEEEEEGTYHCTECEDSFDNLGELHGHF 180
QEAPAPEGRALGEEEEEPPRAGEGRPAGREEEEEEEEEGTYHCTECEDSFDNLGELHGHF
Sbjct: 121 QEAPAPEGRALGEEEEEPPRAGEGRPAGREEEEEEEEEGTYHCTECEDSFDNLGELHGHF 180
Query: 181 MLHARGEV 188
MLHARGEV
Sbjct: 181 MLHARGEV 188
>gi|24431933 reticulon 4 isoform B [Homo sapiens]
Length = 373
Score = 51.6 bits (122), Expect = 4e-07
Identities = 46/151 (30%), Positives = 61/151 (40%), Gaps = 26/151 (17%)
Query: 22 DLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYDPGYKVKQRLGGGRGGPSRR 81
D P P+ + ++ + EP+ EEEE+EEEEE+E D E + ++ G P
Sbjct: 14 DSPPRPQPAFKYQF-VREPEDEEEEEEEEEEDEDEDLEELE--VLERKPAAGLSAAPVPT 70
Query: 82 APRAAQP---------PAQPCQLCGRSPLGEAPPGTP---------PCRLCCPATAPQEA 123
AP A P P P R PL APP P P PA +P A
Sbjct: 71 APAAGAPLMDFGNDFVPPAP-----RGPLPAAPPVAPERQPSWDPSPVSSTVPAPSPLSA 125
Query: 124 PAPEGRALGEEEEEPPRAGEGRPAGREEEEE 154
A L E++E P R PA + E
Sbjct: 126 AAVSPSKLPEDDEPPARPPPPPPASVSPQAE 156
>gi|47519490 reticulon 4 isoform D [Homo sapiens]
Length = 392
Score = 51.6 bits (122), Expect = 4e-07
Identities = 46/151 (30%), Positives = 61/151 (40%), Gaps = 26/151 (17%)
Query: 22 DLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYDPGYKVKQRLGGGRGGPSRR 81
D P P+ + ++ + EP+ EEEE+EEEEE+E D E + ++ G P
Sbjct: 14 DSPPRPQPAFKYQF-VREPEDEEEEEEEEEEDEDEDLEELE--VLERKPAAGLSAAPVPT 70
Query: 82 APRAAQP---------PAQPCQLCGRSPLGEAPPGTP---------PCRLCCPATAPQEA 123
AP A P P P R PL APP P P PA +P A
Sbjct: 71 APAAGAPLMDFGNDFVPPAP-----RGPLPAAPPVAPERQPSWDPSPVSSTVPAPSPLSA 125
Query: 124 PAPEGRALGEEEEEPPRAGEGRPAGREEEEE 154
A L E++E P R PA + E
Sbjct: 126 AAVSPSKLPEDDEPPARPPPPPPASVSPQAE 156
>gi|24431935 reticulon 4 isoform A [Homo sapiens]
Length = 1192
Score = 51.6 bits (122), Expect = 4e-07
Identities = 46/151 (30%), Positives = 61/151 (40%), Gaps = 26/151 (17%)
Query: 22 DLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYDPGYKVKQRLGGGRGGPSRR 81
D P P+ + ++ + EP+ EEEE+EEEEE+E D E + ++ G P
Sbjct: 14 DSPPRPQPAFKYQF-VREPEDEEEEEEEEEEDEDEDLEELE--VLERKPAAGLSAAPVPT 70
Query: 82 APRAAQP---------PAQPCQLCGRSPLGEAPPGTP---------PCRLCCPATAPQEA 123
AP A P P P R PL APP P P PA +P A
Sbjct: 71 APAAGAPLMDFGNDFVPPAP-----RGPLPAAPPVAPERQPSWDPSPVSSTVPAPSPLSA 125
Query: 124 PAPEGRALGEEEEEPPRAGEGRPAGREEEEE 154
A L E++E P R PA + E
Sbjct: 126 AAVSPSKLPEDDEPPARPPPPPPASVSPQAE 156
>gi|23503317 coiled-coil domain containing 96 [Homo sapiens]
Length = 555
Score = 48.5 bits (114), Expect = 3e-06
Identities = 52/178 (29%), Positives = 69/178 (38%), Gaps = 33/178 (18%)
Query: 4 TREPAETGGYASLEEDDEDLSPGPEH--SSDSEYTLSEPDSEEEEDEEEEEEETT----- 56
T++P GG D E L+ P +S T EP E E EEEEEE+
Sbjct: 8 TKDPGGEGG------DGESLAARPSKIKASSGPPTSPEPGELESEPEEEEEEQAASQGGT 61
Query: 57 ---DDPEYDPGYKVKQRLGG-GRGGPSRRAPRAAQP-PAQPCQLCGRSPLGEAPPGTPPC 111
+ E G + G G G P R P QP P +P ++ P + PG P
Sbjct: 62 AADEQAEAPKGLTAAEAAGEEGPGEPGR--PAEPQPEPEEPAEVGAEEP-AQPEPGAGPE 118
Query: 112 RLCCPATAPQEAPAPEGRALG------------EEEEEPPRAGEGRPAGREEEEEEEE 157
L A A + A EG+ + EE P A R G EE++EE +
Sbjct: 119 ELEAEAGAEELEQAAEGKEVRFQASLPLTRIDEEEAAAAPEAETERVEGEEEDKEETQ 176
Score = 30.0 bits (66), Expect = 1.2
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 7/51 (13%)
Query: 32 DSEYTLSEPDSEEE--EDEEEEEEETTDDPEYDPGYKVKQRLGGGRGGPSR 80
D E + P++E E E EEE++EET D G + K+R G GR S+
Sbjct: 150 DEEEAAAAPEAETERVEGEEEDKEETQRD-----GAESKERDGEGRPAKSQ 195
>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 48.1 bits (113), Expect = 4e-06
Identities = 49/174 (28%), Positives = 64/174 (36%), Gaps = 49/174 (28%)
Query: 20 DEDLSPGP---EHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYDPGYKVK-QRLGGGR 75
+ DL PG E +SE E D EEEE++EEE + +D + P Y K +R G
Sbjct: 620 ETDLRPGELSGEEMEESEEDEEEEDEEEEEEDEEESKAGGEDQLWRPYYSYKPKRKAGAA 679
Query: 76 GGPS---RRAPRAAQPPAQPCQLCGRSPLGEAPPGTPPCRLCCPATAPQEAPAPEGRALG 132
GG S PR +PP +L RS +E PA E
Sbjct: 680 GGASVGGSGLPRGRRPPRWRQKLERRS--------------------WEETPAAES---- 715
Query: 133 EEEEEPPRAGEGRPAGREEEEEEEEEGTYHCTECEDSFDNLGELHGHFMLHARG 186
PAGR E + C +C +F L +L H H G
Sbjct: 716 -------------PAGRARTERR-----HRCGDCAQTFTTLRKLRKHQEAHGGG 751
>gi|192807284 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 48.1 bits (113), Expect = 4e-06
Identities = 49/174 (28%), Positives = 64/174 (36%), Gaps = 49/174 (28%)
Query: 20 DEDLSPGP---EHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYDPGYKVK-QRLGGGR 75
+ DL PG E +SE E D EEEE++EEE + +D + P Y K +R G
Sbjct: 620 ETDLRPGELSGEEMEESEEDEEEEDEEEEEEDEEESKAGGEDQLWRPYYSYKPKRKAGAA 679
Query: 76 GGPS---RRAPRAAQPPAQPCQLCGRSPLGEAPPGTPPCRLCCPATAPQEAPAPEGRALG 132
GG S PR +PP +L RS +E PA E
Sbjct: 680 GGASVGGSGLPRGRRPPRWRQKLERRS--------------------WEETPAAES---- 715
Query: 133 EEEEEPPRAGEGRPAGREEEEEEEEEGTYHCTECEDSFDNLGELHGHFMLHARG 186
PAGR E + C +C +F L +L H H G
Sbjct: 716 -------------PAGRARTERR-----HRCGDCAQTFTTLRKLRKHQEAHGGG 751
>gi|155030232 proline, glutamic acid and leucine rich protein 1 [Homo
sapiens]
Length = 1130
Score = 47.8 bits (112), Expect = 6e-06
Identities = 56/194 (28%), Positives = 70/194 (36%), Gaps = 30/194 (15%)
Query: 3 ETREPAETGGYASLEEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEE--------EEEEE 54
E E E EE++ED E + EY E + EEE +EE EEEEE
Sbjct: 890 EEEEEEEEEEEEEEEEEEEDFEE--EEEDEEEYFEEEEEEEEEFEEEFEEEEGELEEEEE 947
Query: 55 TTDDPEYDPGYKVKQRLGGGRGG-------PSRRAPRAAQPPAQPCQLCGRSP------L 101
D+ E + +V+ G GG P P A PP P ++ L
Sbjct: 948 EEDEEEEEELEEVEDLEFGTAGGEVEEGAPPPPTLPPALPPPESPPKVQPEPEPEPGLLL 1007
Query: 102 GEAPPGTPPCRLC--CPATAPQEAPAPEGRALGEEEEEPPRAGEGRPAGREEEEEEEEEG 159
PGT R P AP+ P+ GE E E G P EEE
Sbjct: 1008 EVEEPGTEEERGADTAPTLAPEALPSQ-----GEVEREGESPAAGPPPQELVEEEPSAPP 1062
Query: 160 TYHCTECEDSFDNL 173
T E ED D +
Sbjct: 1063 TLLEEETEDGSDKV 1076
Score = 43.9 bits (102), Expect = 8e-05
Identities = 45/155 (29%), Positives = 62/155 (40%), Gaps = 19/155 (12%)
Query: 11 GGYASLEEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYDPGY----- 65
GG +LEED L+ +SSD E E + EEEE+EEEEEE+ ++ E + Y
Sbjct: 869 GGPPALEED---LTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEEEE 925
Query: 66 --------KVKQRLGGGRGGPSRRAPRAAQPPAQPCQLCGRSPLGEAPPGTPPCRLCCPA 117
+ ++ G + + L + GE G PP PA
Sbjct: 926 EEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLEFGTAGGEVEEGAPPPPTLPPA 985
Query: 118 TAPQEAPAPEGRALGEEEEEPPRAGEGRPAGREEE 152
P E+P + E E EP E G EEE
Sbjct: 986 LPPPESPP---KVQPEPEPEPGLLLEVEEPGTEEE 1017
Score = 36.2 bits (82), Expect = 0.017
Identities = 49/170 (28%), Positives = 58/170 (34%), Gaps = 37/170 (21%)
Query: 41 DSEEEEDEEEEEEETTDD-----PEYDPGYKVKQRLGGGRGGPSRRAPRAAQPPA----Q 91
D EE D E E +DD PE P G + P A PP +
Sbjct: 769 DKEEASDVEISLESDSDDSVVIVPEGLPPLPPPPPSGATPPPIAPTGPPTASPPVPAKEE 828
Query: 92 PCQL-CGRSPLGEAPPGTPPCRLCCPATAPQEAPAPEGRALG------------------ 132
P +L PL PP PP + P T P PEG G
Sbjct: 829 PEELPAAPGPLPPPPPPPPP--VPGPVTLPPPQLVPEGTPGGGGPPALEEDLTVININSS 886
Query: 133 --EEEEEPPRAGEGRPAGREEEEEEEEEGTYHCTECEDSFDNLGELHGHF 180
EEEEE E EEEEEEEE+ + E+ F+ E F
Sbjct: 887 DEEEEEEEEEEEE-----EEEEEEEEEDFEEEEEDEEEYFEEEEEEEEEF 931
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 47.0 bits (110), Expect = 1e-05
Identities = 41/139 (29%), Positives = 57/139 (41%), Gaps = 14/139 (10%)
Query: 28 EHSSDSEYTLSEPDSEEEEDEEEEEEE----TTDDPEYDPGYKVKQRLGGGRGGPSRRAP 83
E + E +SE + EEEE+ +EEEEE +D E D V R G G R +P
Sbjct: 8 EEEEEEEMVVSEEEEEEEEEGDEEEEEEVEAADEDDEEDDDEGVLGRGPGHDRGRDRHSP 67
Query: 84 RAAQ--PPAQPCQLCGRSPLGEAPPGTPPCRLCCPATAPQEAPAPEGRALGEEEEEPPRA 141
PP P PL PP PP + R +++E P
Sbjct: 68 PGCHLFPPPPP----PPPPLPPPPPPPPPDKDDIRLLPSALGVKKRKRGPKKQKENKP-- 121
Query: 142 GEGRPAGREEEEEEEEEGT 160
G+P R++ + EEE G+
Sbjct: 122 --GKPRKRKKRDSEEEFGS 138
Score = 29.3 bits (64), Expect = 2.1
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 13/74 (17%)
Query: 95 LCGRSPLGEAPPGTPPCRLCCPATAPQEAPAPEGRALGEEEEEPPRAGEGRPAGREEEEE 154
+C L AP G C C EG +EEE EG G +EEE+
Sbjct: 463 VCLDPELDRAPEGKWSCPHC----------EKEGVQWEAKEEEEEYEEEGEEEGEKEEED 512
Query: 155 EEEEGTYHCTECED 168
+ E +C C+D
Sbjct: 513 DHME---YCRVCKD 523
Score = 29.3 bits (64), Expect = 2.1
Identities = 42/154 (27%), Positives = 51/154 (33%), Gaps = 43/154 (27%)
Query: 20 DEDLSPGPEHS-----SDSEYTLSEPDSEEEEDEEEEEEETTDDPEYDPGYKVKQRLGGG 74
D +L PE + E E EEEE EEE EEE + E D + GG
Sbjct: 466 DPELDRAPEGKWSCPHCEKEGVQWEAKEEEEEYEEEGEEEGEKEEEDDHMEYCRVCKDGG 525
Query: 75 RGGPSRRAPRAAQPPAQPCQLCGRS--------PLGEAPPGTPPCRLC-CP--------- 116
C C S PL + P G C C CP
Sbjct: 526 E--------------LLCCDACISSYHIHCLNPPLPDIPNGEWLCPRCTCPVLKGRVQKI 571
Query: 117 -----ATAPQEAPAPEGRALGEEEEEPPRAGEGR 145
P PAP+ +A G + PPR +GR
Sbjct: 572 LHWRWGEPPVAVPAPQ-QADGNPDVPPPRPLQGR 604
Score = 28.9 bits (63), Expect = 2.7
Identities = 21/54 (38%), Positives = 25/54 (46%), Gaps = 1/54 (1%)
Query: 133 EEEEEPPRAGEGRPAGREEEEEEEEEGTYHCTECEDSFDNLGELHGHFMLHARG 186
EEEEE E EE +EEEEE E ++ D+ G L G H RG
Sbjct: 9 EEEEEEMVVSEEEEEEEEEGDEEEEEEVEAADEDDEEDDDEGVL-GRGPGHDRG 61
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 46.6 bits (109), Expect = 1e-05
Identities = 47/164 (28%), Positives = 61/164 (37%), Gaps = 19/164 (11%)
Query: 18 EDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYDPGYKVKQRLGGGRGG 77
E++E G + + E E + EEEE E E EEE + E G + ++ G G G
Sbjct: 933 EEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEG-EGEEEEGEGEGE 991
Query: 78 PSRRAPRAAQPPAQPCQLCGRSPLGEAPPGTPPCRLCCPATAPQEAPAPEGRALGEEEE- 136
+ + G E E EG GEEEE
Sbjct: 992 EEEGEEEGEEEGEGEEEGEGEGEEEEE------------GEVEGEVEGEEGEGEGEEEEG 1039
Query: 137 -----EPPRAGEGRPAGREEEEEEEEEGTYHCTECEDSFDNLGE 175
E + GEG R EEEEEEEG Y T E++ GE
Sbjct: 1040 EEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENERQDGE 1083
Score = 38.5 bits (88), Expect = 0.003
Identities = 46/167 (27%), Positives = 61/167 (36%), Gaps = 12/167 (7%)
Query: 18 EDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYDPGYKVKQRLGGGRG- 76
E+ E G E + E E + EEE + E EEEE + E + + ++ G G+G
Sbjct: 863 EEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGE 922
Query: 77 -----GPSRRAPRAAQPPAQPCQLCGRSPLGEAPPGTPPCRLCCPATAPQEAPAPEGRAL 131
G + + + G GE E EG
Sbjct: 923 EEGEEGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGE--GEGEEEGEGEGEEGEGE 980
Query: 132 GEEEEEPPRAGEGRPAGREEEEEEEEEGTYHCTECEDSFDNLGELHG 178
GEEEE GEG EEE EEE EG E E + GE+ G
Sbjct: 981 GEEEE---GEGEGEEEEGEEEGEEEGEGEEE-GEGEGEEEEEGEVEG 1023
Score = 38.1 bits (87), Expect = 0.004
Identities = 49/165 (29%), Positives = 60/165 (36%), Gaps = 15/165 (9%)
Query: 3 ETREPAETGGYASLEEDD-EDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEY 61
E E E G EE + + G E + E E + EEEE E E EEE + E
Sbjct: 838 EEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEE 897
Query: 62 DPGYKVKQRLGGGRG----GPSRRAPRAAQPPAQPCQLCGRSPLGEAPPGTPPCRLCCPA 117
+ G + G G G G + + + + G GE G
Sbjct: 898 EEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGE---GEGEDGEGEGE---EE 951
Query: 118 TAPQEAPAPEGRALGEEEEEPPRAGEGRPAGREEEEE---EEEEG 159
E EG GEEE E EG G EEE E EEEEG
Sbjct: 952 EGEWEGEEEEGEGEGEEEGEG-EGEEGEGEGEEEEGEGEGEEEEG 995
Score = 37.0 bits (84), Expect = 0.010
Identities = 46/175 (26%), Positives = 58/175 (33%), Gaps = 21/175 (12%)
Query: 17 EEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYDPGYKVKQRLGGGR- 75
E +E+ G E D E E + E E EE E EE + E + G + K+ G
Sbjct: 729 EGGEEEHGEGEEEEGDRE---EEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEE 785
Query: 76 -----GGPSRRAPRAAQPPAQPCQLCGRSPLGEAPPGTPPCRLCCPATAPQEAPAPEGRA 130
G + + + G GE G +E E
Sbjct: 786 KGEEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGERE-----EEEEEGEGEEEEG 840
Query: 131 LGEEEEEPPRAGEGRPAGREE-------EEEEEEEGTYHCTECEDSFDNLGELHG 178
GEEEE EG G EE EE EE EG E E + GE G
Sbjct: 841 EGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEG 895
Score = 35.4 bits (80), Expect = 0.029
Identities = 43/178 (24%), Positives = 61/178 (34%), Gaps = 14/178 (7%)
Query: 5 REPAETGGYASLEEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYDPG 64
RE E EE + + G + E E +EE+ EEE ++ ++ E +
Sbjct: 745 REEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGR 804
Query: 65 YKVKQRLGGGRGGPSRRAPRAAQPPAQPCQLCGRSPLGEAPPGTPPCRLCCPATAPQEAP 124
+ K+ G GG + + + GE G +E
Sbjct: 805 GEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGE----------GEEEEG 854
Query: 125 APEGRALGEEEEEPPRAGEGRPAGREEEEE----EEEEGTYHCTECEDSFDNLGELHG 178
+G GEE E EG G EEE E EE EG E E + GE G
Sbjct: 855 EGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEG 912
Score = 33.9 bits (76), Expect = 0.085
Identities = 40/159 (25%), Positives = 58/159 (36%), Gaps = 14/159 (8%)
Query: 3 ETREPAETGGYASLEEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYD 62
E +E E E + E G E + E + + EEE++ E +EE ++ E +
Sbjct: 708 EEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGE 767
Query: 63 PGYKVKQRLGGGRGGPSRRAPRAA-QPPAQPCQLCGRSPLGEAPPGTPPCRLCCPATAPQ 121
+ +R R G + Q + + GR E +
Sbjct: 768 REKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEKE------------EGGEVE 815
Query: 122 EAPAPEGRALGEEEEEPPRAGEGRPAGREEE-EEEEEEG 159
EG+ EEEEE E G EEE E EEEEG
Sbjct: 816 GGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEG 854
Score = 32.7 bits (73), Expect = 0.19
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 18 EDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEE-------EEEEETTDDPEYDPGYKVKQR 70
E++E G E + E + + EEEE+EE EEE E D EY K+K
Sbjct: 1035 EEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETGEEENERQDGEEYKKVSKIKGS 1094
Query: 71 LGGGR 75
+ G+
Sbjct: 1095 VKYGK 1099
Score = 29.3 bits (64), Expect = 2.1
Identities = 19/69 (27%), Positives = 29/69 (42%), Gaps = 1/69 (1%)
Query: 6 EPAETGGYASLEEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEY-DPG 64
E E G E +E G E + E E + E EE+ EEE ++ +Y + G
Sbjct: 1014 EEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEEEEEEGKYQETG 1073
Query: 65 YKVKQRLGG 73
+ +R G
Sbjct: 1074 EEENERQDG 1082
>gi|4557719 DNA ligase I [Homo sapiens]
Length = 919
Score = 46.2 bits (108), Expect = 2e-05
Identities = 46/166 (27%), Positives = 64/166 (38%), Gaps = 26/166 (15%)
Query: 27 PEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYDPGYKVKQRLGG-GRGGPSRRAPRA 85
PE + + +EP + E +D P PG K + LG G +P
Sbjct: 20 PEKEASNSSRETEPPPKAALKEWNGVVSESDSPVKRPGRKAARVLGSEGEEEDEALSPAK 79
Query: 86 AQPPAQPCQ----------------LCGRSPLGEAPPGTPPCRLCCPATAPQEAPAPEGR 129
Q PA C L SP+ +P G P R TA ++ P +
Sbjct: 80 GQKPALDCSQVSPPRPATSPENNASLSDTSPMDSSPSGIPKRR-----TARKQLPKRTIQ 134
Query: 130 ALGEEEEEPPRAGEGRPAGREEEEEEEEEGTYHCTECEDSFDNLGE 175
+ EE+ E E R A R++EEEEEE TE E + + GE
Sbjct: 135 EVLEEQSED----EDREAKRKKEEEEEETPKESLTEAEVATEKEGE 176
Score = 29.6 bits (65), Expect = 1.6
Identities = 28/115 (24%), Positives = 47/115 (40%), Gaps = 29/115 (25%)
Query: 3 ETREPAETGGYASLEEDDED-----LSPGPEHSSDSEY---TLSEPDSEEEEDEEEEEEE 54
ET + + T + E++ ED P P +S +E ++SEP+ +++ +EEEE+
Sbjct: 158 ETPKESLTEAEVATEKEGEDGDQPTTPPKPLKTSKAETPTESVSEPEVATKQELQEEEEQ 217
Query: 55 TTDDPEYDPGYKVKQRLGGGRGGPSRRAPRAAQPPAQPCQLCGRSPLGEAPPGTP 109
T P RRAP+ P + + + E PG P
Sbjct: 218 TK---------------------PPRRAPKTLSSFFTPRKPAVKKEVKEEEPGAP 251
>gi|22035677 AT rich interactive domain 4B isoform 1 [Homo sapiens]
Length = 1312
Score = 45.8 bits (107), Expect = 2e-05
Identities = 24/66 (36%), Positives = 37/66 (56%), Gaps = 6/66 (9%)
Query: 16 LEEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPE------YDPGYKVKQ 69
+E ++E G E + + + E + EEEE+EEEE+E+ D+ E Y PG KV+
Sbjct: 518 VEAEEEKAKSGDETNKEEDEDDEEAEEEEEEEEEEEDEDDDDNNEEEEFECYPPGMKVQV 577
Query: 70 RLGGGR 75
R G G+
Sbjct: 578 RYGRGK 583
Score = 30.4 bits (67), Expect = 0.94
Identities = 12/33 (36%), Positives = 23/33 (69%)
Query: 28 EHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPE 60
E DS + +E + EEE+DE+E+E+ ++++ E
Sbjct: 268 ELKEDSSSSEAEEEEEEEDDEKEKEDNSSEEEE 300
Score = 27.7 bits (60), Expect = 6.1
Identities = 20/52 (38%), Positives = 23/52 (44%), Gaps = 12/52 (23%)
Query: 121 QEAPAPEGRALGEEEEEPPRAGEGRPAGREEEEEEEEEGTYHCTECEDSFDN 172
+E A G +EE+E E EEEEEEEEE ED DN
Sbjct: 521 EEEKAKSGDETNKEEDEDDEEAE-----EEEEEEEEEED-------EDDDDN 560
Score = 27.3 bits (59), Expect = 7.9
Identities = 12/36 (33%), Positives = 23/36 (63%), Gaps = 2/36 (5%)
Query: 28 EHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYDP 63
E SS SE E + EE++++E+E+ + ++ E +P
Sbjct: 271 EDSSSSE--AEEEEEEEDDEKEKEDNSSEEEEEIEP 304
>gi|45359846 Ras-GTPase activating protein SH3 domain-binding
protein 2 isoform b [Homo sapiens]
Length = 449
Score = 45.4 bits (106), Expect = 3e-05
Identities = 38/135 (28%), Positives = 52/135 (38%), Gaps = 20/135 (14%)
Query: 32 DSEYTLSEPDSEEEEDEEEEEEETTDDPEYDP-------GYKVKQRLGGGRGGPSRRAPR 84
D + SEP+ +EE ++E EEE+ P +P GY + G P +
Sbjct: 135 DEVFGDSEPELDEESEDEVEEEQEERQPSPEPVQENANSGYYEAHPVTNGIEEPLEESSH 194
Query: 85 AAQP-PAQPCQLCGRSP---------LGEAPPGTPPCRLCCPATAPQEAPAPEGRALGEE 134
+P P + P L E PP P + PQE P P A E
Sbjct: 195 EPEPEPESETKTEELKPQVEEKNLEELEEKSTTPPPAE---PVSLPQEPPKPRVEAKPEV 251
Query: 135 EEEPPRAGEGRPAGR 149
+ +PPR E RP R
Sbjct: 252 QSQPPRVREQRPRER 266
>gi|239757043 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 996
Score = 44.3 bits (103), Expect = 6e-05
Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 50/195 (25%)
Query: 14 ASLEEDDEDLSPGPEHSSDSEYTLSEPDSEEEE-----DEEEEEEETTDDPEYDPGYKVK 68
+S +EDDE+ E D E P+ EEEE D++EEE+E T+ DP
Sbjct: 731 SSEDEDDEE----EEQEVDVEGH-KPPEGEEEEEGRDPDDDEEEDEETEVLLGDP----- 780
Query: 69 QRLGGGR----GGPSRRAPRAAQPPAQPCQLCGRSPLG------------------EAPP 106
+GGGR GPS + + PA + G PLG + PP
Sbjct: 781 -LVGGGRFLQGRGPSEKGSSRDRAPA----VAGAFPLGLNSSRLLQEDGKLGDPGSDLPP 835
Query: 107 GTPPCRLCCPATAPQEAPAPEGRALGEEEEEPPRAGEGRPAGREEEEEEEEEGTYHCTEC 166
P P APQ+A + G P + E +P+ ++ ++ +E T+
Sbjct: 836 PPP------PPLAPQKASGGGSSSPGSPVHHP--SLEEQPSYKDSQKTKENNQVIVSTKD 887
Query: 167 EDSFDNLGELHGHFM 181
++SF + + H F+
Sbjct: 888 DNSFSDKNKEHSFFI 902
Score = 32.0 bits (71), Expect = 0.32
Identities = 34/131 (25%), Positives = 47/131 (35%), Gaps = 31/131 (23%)
Query: 73 GGRGGPSRRAPRAAQPPAQPCQLCGRSP----------------LGEAPPGTPPCRLCCP 116
GG G + AP PP QP Q+ P L E+PPG
Sbjct: 517 GGAAGSAEAAP----PPGQPPQVVANGPGSGPPPPAGGAGSRDALFESPPGGSGGDCSAG 572
Query: 117 ATAPQEAPAPEGRALGEEEEEPPRAGEGRPAGREE---EEEEEEEGTYHCTEC------E 167
+T P ++ A G P AG PA E + G+YH + +
Sbjct: 573 STPPADSVAAAGAGAAAAGSGP--AGSRVPAPHHPHLLEGRKAGGGSYHHSSAFRPVGGK 630
Query: 168 DSFDNLGELHG 178
D ++L +LHG
Sbjct: 631 DDAESLAKLHG 641
Score = 30.0 bits (66), Expect = 1.2
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 13/92 (14%)
Query: 77 GPSRRAPRAAQPPAQPCQLCGRSPLGEAP-------PGTPPCRLCCPATAPQEAPAPEGR 129
G R P PP P PL + P PG C ++ E E +
Sbjct: 687 GSERHHPAPPPPPPPPPP----PPLAQHPHHRGLLSPGGTSCSYPSEDSSEDEDDEEEEQ 742
Query: 130 ALGEEEEEPPRAGEGRPAGRE-EEEEEEEEGT 160
+ E +PP GE GR+ +++EEE+E T
Sbjct: 743 EVDVEGHKPPE-GEEEEEGRDPDDDEEEDEET 773
>gi|239751555 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 44.3 bits (103), Expect = 6e-05
Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 50/195 (25%)
Query: 14 ASLEEDDEDLSPGPEHSSDSEYTLSEPDSEEEE-----DEEEEEEETTDDPEYDPGYKVK 68
+S +EDDE+ E D E P+ EEEE D++EEE+E T+ DP
Sbjct: 731 SSEDEDDEE----EEQEVDVEGH-KPPEGEEEEEGRDPDDDEEEDEETEVLLGDP----- 780
Query: 69 QRLGGGR----GGPSRRAPRAAQPPAQPCQLCGRSPLG------------------EAPP 106
+GGGR GPS + + PA + G PLG + PP
Sbjct: 781 -LVGGGRFLQGRGPSEKGSSRDRAPA----VAGAFPLGLNSSRLLQEDGKLGDPGSDLPP 835
Query: 107 GTPPCRLCCPATAPQEAPAPEGRALGEEEEEPPRAGEGRPAGREEEEEEEEEGTYHCTEC 166
P P APQ+A + G P + E +P+ ++ ++ +E T+
Sbjct: 836 PPP------PPLAPQKASGGGSSSPGSPVHHP--SLEEQPSYKDSQKTKENNQVIVSTKD 887
Query: 167 EDSFDNLGELHGHFM 181
++SF + + H F+
Sbjct: 888 DNSFSDKNKEHSFFI 902
Score = 32.0 bits (71), Expect = 0.32
Identities = 34/131 (25%), Positives = 47/131 (35%), Gaps = 31/131 (23%)
Query: 73 GGRGGPSRRAPRAAQPPAQPCQLCGRSP----------------LGEAPPGTPPCRLCCP 116
GG G + AP PP QP Q+ P L E+PPG
Sbjct: 517 GGAAGSAEAAP----PPGQPPQVVANGPGSGPPPPAGGAGSRDALFESPPGGSGGDCSAG 572
Query: 117 ATAPQEAPAPEGRALGEEEEEPPRAGEGRPAGREE---EEEEEEEGTYHCTEC------E 167
+T P ++ A G P AG PA E + G+YH + +
Sbjct: 573 STPPADSVAAAGAGAAAAGSGP--AGSRVPAPHHPHLLEGRKAGGGSYHHSSAFRPVGGK 630
Query: 168 DSFDNLGELHG 178
D ++L +LHG
Sbjct: 631 DDAESLAKLHG 641
Score = 31.6 bits (70), Expect = 0.42
Identities = 32/98 (32%), Positives = 36/98 (36%), Gaps = 25/98 (25%)
Query: 77 GPSRRAPRAAQPPAQPCQLCGRSPLGEAP-------PGTPPCRLCCPATAPQEAPAPEGR 129
G R P PP P PL + P PG C C P+ E E
Sbjct: 687 GSERHHPAPPPPPPPPPP----PPLAQHPHHRGLLSPGGTSC--CYPSEDSSEDEDDE-- 738
Query: 130 ALGEEEEEPPRAGEGRPAGREEEE-------EEEEEGT 160
EEE+E G P G EEEE EEE+E T
Sbjct: 739 ---EEEQEVDVEGHKPPEGEEEEEGRDPDDDEEEDEET 773
>gi|239746067 PREDICTED: functional smad suppressing element 18
[Homo sapiens]
Length = 1252
Score = 44.3 bits (103), Expect = 6e-05
Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 50/195 (25%)
Query: 14 ASLEEDDEDLSPGPEHSSDSEYTLSEPDSEEEE-----DEEEEEEETTDDPEYDPGYKVK 68
+S +EDDE+ E D E P+ EEEE D++EEE+E T+ DP
Sbjct: 731 SSEDEDDEE----EEQEVDVEGH-KPPEGEEEEEGRDPDDDEEEDEETEVLLGDP----- 780
Query: 69 QRLGGGR----GGPSRRAPRAAQPPAQPCQLCGRSPLG------------------EAPP 106
+GGGR GPS + + PA + G PLG + PP
Sbjct: 781 -LVGGGRFLQGRGPSEKGSSRDRAPA----VAGAFPLGLNSSRLLQEDGKLGDPGSDLPP 835
Query: 107 GTPPCRLCCPATAPQEAPAPEGRALGEEEEEPPRAGEGRPAGREEEEEEEEEGTYHCTEC 166
P P APQ+A + G P + E +P+ ++ ++ +E T+
Sbjct: 836 PPP------PPLAPQKASGGGSSSPGSPVHHP--SLEEQPSYKDSQKTKENNQVIVSTKD 887
Query: 167 EDSFDNLGELHGHFM 181
++SF + + H F+
Sbjct: 888 DNSFSDKNKEHSFFI 902
Score = 32.0 bits (71), Expect = 0.32
Identities = 34/131 (25%), Positives = 47/131 (35%), Gaps = 31/131 (23%)
Query: 73 GGRGGPSRRAPRAAQPPAQPCQLCGRSP----------------LGEAPPGTPPCRLCCP 116
GG G + AP PP QP Q+ P L E+PPG
Sbjct: 517 GGAAGSAEAAP----PPGQPPQVVANGPGSGPPPPAGGAGSRDALFESPPGGSGGDCSAG 572
Query: 117 ATAPQEAPAPEGRALGEEEEEPPRAGEGRPAGREE---EEEEEEEGTYHCTEC------E 167
+T P ++ A G P AG PA E + G+YH + +
Sbjct: 573 STPPADSVAAAGAGAAAAGSGP--AGSRVPAPHHPHLLEGRKAGGGSYHHSSAFRPVGGK 630
Query: 168 DSFDNLGELHG 178
D ++L +LHG
Sbjct: 631 DDAESLAKLHG 641
Score = 31.6 bits (70), Expect = 0.42
Identities = 32/98 (32%), Positives = 36/98 (36%), Gaps = 25/98 (25%)
Query: 77 GPSRRAPRAAQPPAQPCQLCGRSPLGEAP-------PGTPPCRLCCPATAPQEAPAPEGR 129
G R P PP P PL + P PG C C P+ E E
Sbjct: 687 GSERHHPAPPPPPPPPPP----PPLAQHPHHRGLLSPGGTSC--CYPSEDSSEDEDDE-- 738
Query: 130 ALGEEEEEPPRAGEGRPAGREEEE-------EEEEEGT 160
EEE+E G P G EEEE EEE+E T
Sbjct: 739 ---EEEQEVDVEGHKPPEGEEEEEGRDPDDDEEEDEET 773
>gi|157266334 tubby like protein 1 [Homo sapiens]
Length = 542
Score = 44.3 bits (103), Expect = 6e-05
Identities = 47/159 (29%), Positives = 64/159 (40%), Gaps = 51/159 (32%)
Query: 40 PDSEEEEDEEEEEEETTDDPEYDPGYKV----KQRLGGGRGGPSRRAPRAAQPPAQPCQL 95
PD+E+EE+EEEE+EE ++ + K+ K+ L + AQ P
Sbjct: 112 PDAEDEEEEEEEDEEDEEEEAEEKKEKILLPPKKPLREKSSADLKERRAKAQGP------ 165
Query: 96 CGRSPLGEAPPGTPPCRLCCPATAPQEAPAPEG--------RALGEEEEEP--------- 138
R LG P P R+ +EAPA EG + GE +++P
Sbjct: 166 --RGDLGSPDPPPKPLRV-----RNKEAPAGEGTKMRKTKKKGSGEADKDPSGSPASARK 218
Query: 139 -PRA----GEGRP------------AGREEEEEEEEEGT 160
P A GEG P R+EEEEEEE T
Sbjct: 219 SPAAMFLVGEGSPDKKALKKKGTPKGARKEEEEEEEAAT 257
>gi|23346412 cysteine-serine-rich nuclear protein 3 [Homo sapiens]
Length = 585
Score = 43.9 bits (102), Expect = 8e-05
Identities = 23/46 (50%), Positives = 25/46 (54%)
Query: 17 EEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYD 62
EED G SS SE D EEEE+EEEEEEE DD + D
Sbjct: 346 EEDGSSFCSGVTDSSTQSLAPSESDEEEEEEEEEEEEEDDDDDKGD 391
Score = 39.3 bits (90), Expect = 0.002
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 17 EEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYDPGYKVKQRLG 72
EE++ED S +DS P +EE+EEEEEEE +D + D G + LG
Sbjct: 343 EEEEEDGSSFCSGVTDSSTQSLAPSESDEEEEEEEEEEEEEDDDDDKGDGFVEGLG 398
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 43.9 bits (102), Expect = 8e-05
Identities = 22/57 (38%), Positives = 32/57 (56%)
Query: 4 TREPAETGGYASLEEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPE 60
+ E ++ G S EE+DE+ E + E E + EEEE+EEEEEEE ++ E
Sbjct: 245 SEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEE 301
Score = 42.4 bits (98), Expect = 2e-04
Identities = 22/72 (30%), Positives = 34/72 (47%)
Query: 17 EEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYDPGYKVKQRLGGGRG 76
EE++E+ E + E E + EEEE+EEEEEEE ++ D ++ +
Sbjct: 265 EEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPDVIFQEDTSHTSAQK 324
Query: 77 GPSRRAPRAAQP 88
P R P + P
Sbjct: 325 APELRGPESPSP 336
Score = 42.0 bits (97), Expect = 3e-04
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 17 EEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPE 60
EED+E+ E D E E + EEEE+EEEEEEE ++ E
Sbjct: 259 EEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEE 302
Score = 33.5 bits (75), Expect = 0.11
Identities = 17/47 (36%), Positives = 24/47 (51%)
Query: 14 ASLEEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPE 60
A+ EE + D E E + EE+E+EEEEEEE ++ E
Sbjct: 243 AASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEE 289
Score = 33.1 bits (74), Expect = 0.14
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 7/49 (14%)
Query: 18 EDDEDLSP------GPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPE 60
E +DL P E SS + LS + E+EE+EEEEEEE D+ E
Sbjct: 230 ERSQDLCPQSLEDAASEESSKQKGILSH-EEEDEEEEEEEEEEEEDEEE 277
Score = 30.4 bits (67), Expect = 0.94
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 4/48 (8%)
Query: 115 CPAT----APQEAPAPEGRALGEEEEEPPRAGEGRPAGREEEEEEEEE 158
CP + A +E+ +G EEE+E E EEEEEEEEE
Sbjct: 236 CPQSLEDAASEESSKQKGILSHEEEDEEEEEEEEEEEEDEEEEEEEEE 283
Score = 29.6 bits (65), Expect = 1.6
Identities = 17/38 (44%), Positives = 18/38 (47%)
Query: 121 QEAPAPEGRALGEEEEEPPRAGEGRPAGREEEEEEEEE 158
+E E EEEEE E EEEEEEEEE
Sbjct: 263 EEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEE 300
Score = 29.6 bits (65), Expect = 1.6
Identities = 17/38 (44%), Positives = 18/38 (47%)
Query: 121 QEAPAPEGRALGEEEEEPPRAGEGRPAGREEEEEEEEE 158
+E E EEEEE E EEEEEEEEE
Sbjct: 267 EEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE 304
Score = 29.3 bits (64), Expect = 2.1
Identities = 15/26 (57%), Positives = 15/26 (57%)
Query: 133 EEEEEPPRAGEGRPAGREEEEEEEEE 158
EEEEE E EEEEEEEEE
Sbjct: 280 EEEEEEEEEEEEEEEEEEEEEEEEEE 305
Score = 29.3 bits (64), Expect = 2.1
Identities = 15/26 (57%), Positives = 15/26 (57%)
Query: 133 EEEEEPPRAGEGRPAGREEEEEEEEE 158
EEEEE E EEEEEEEEE
Sbjct: 281 EEEEEEEEEEEEEEEEEEEEEEEEEE 306
Score = 28.5 bits (62), Expect = 3.6
Identities = 15/26 (57%), Positives = 15/26 (57%)
Query: 133 EEEEEPPRAGEGRPAGREEEEEEEEE 158
EEEEE E EEEEEEEEE
Sbjct: 262 EEEEEEEEEEEEDEEEEEEEEEEEEE 287
Score = 28.1 bits (61), Expect = 4.7
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 11/66 (16%)
Query: 6 EPAETGGYASLEEDDEDLSPGPEHSSD-SEYTLSEPDSEE----------EEDEEEEEEE 54
E E G + E+ +E + E S D +L + SEE EE++EEEEEE
Sbjct: 208 EEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEEDEEEEEE 267
Query: 55 TTDDPE 60
++ E
Sbjct: 268 EEEEEE 273
>gi|118601081 heterogeneous nuclear ribonucleoprotein U-like 2 [Homo
sapiens]
Length = 747
Score = 43.9 bits (102), Expect = 8e-05
Identities = 38/123 (30%), Positives = 52/123 (42%), Gaps = 34/123 (27%)
Query: 40 PDSEEEEDEEEEEEE---TTDDPEYDPGYKVKQRLGGGRGGPSRRAPRAAQPPAQPCQLC 96
P +EEEDEEEEEE+ +D + +P P++ +AAQPP +P +
Sbjct: 71 PGGDEEEDEEEEEEDEEALLEDEDEEP-------------PPAQALGQAAQPPPEPPEAA 117
Query: 97 GRSPLGEAPPGTPPCRLCCPATAPQEAPAPEGRALGEEEEEPPRAGEGRPAGREEEEEEE 156
E + P EA A G G EE+ G G+ REE+E EE
Sbjct: 118 AMEAAAEPD----------ASEKPAEATAGSGGVNGGEEQ-----GLGK---REEDEPEE 159
Query: 157 EEG 159
G
Sbjct: 160 RSG 162
Score = 41.6 bits (96), Expect = 4e-04
Identities = 36/138 (26%), Positives = 51/138 (36%), Gaps = 32/138 (23%)
Query: 41 DSEEEEDEEEEEEETTDDPEYDPGYKVKQRLGGGRGGPSRRAPRAAQPPAQPCQLCGRSP 100
+ E+EE+EEE+EE +D + +P P++ +AAQPP +P +
Sbjct: 75 EEEDEEEEEEDEEALLEDEDEEPP-------------PAQALGQAAQPPPEPPEAAAMEA 121
Query: 101 LGEAPPGTPPCRLCCPATAPQEAPAPEGRALGEEEEEPPRAGEGRPAGREEEEEEEEEGT 160
E P EA A G G EE+ G+ EE+E EE
Sbjct: 122 AAEPDASEKPA----------EATAGSGGVNGGEEQG---------LGKREEDEPEERSG 162
Query: 161 YHCTECEDSFDNLGELHG 178
E D E G
Sbjct: 163 DETPGSEVPGDKAAEEQG 180
Score = 30.4 bits (67), Expect = 0.94
Identities = 14/24 (58%), Positives = 15/24 (62%)
Query: 135 EEEPPRAGEGRPAGREEEEEEEEE 158
E P A G P G EEE+EEEEE
Sbjct: 60 EPRPVAASGGGPGGDEEEDEEEEE 83
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 43.5 bits (101), Expect = 1e-04
Identities = 40/120 (33%), Positives = 48/120 (40%), Gaps = 32/120 (26%)
Query: 13 YASLEEDDEDLSP--GPEHSSDS-EYTLSEPDS-------EEEEDEEEEEEETTDDPEYD 62
Y DE SP PE D E T S P S EEEE+EEEEEEE +D E +
Sbjct: 228 YDPFHPTDEAYSPPPAPEQKYDPFEPTGSNPSSSAGTPSPEEEEEEEEEEEEEEEDEEEE 287
Query: 63 PGY-----KVKQRLGG-------GRGGPSRRAPRAAQPPAQPCQLCGRSPLGEAPPGTPP 110
G ++ + L G + P +PR P QP PGTPP
Sbjct: 288 EGLSQSISRISETLAGIYDDNSLSQDFPGDESPRPDAQPTQP----------TPAPGTPP 337
Score = 37.4 bits (85), Expect = 0.008
Identities = 37/111 (33%), Positives = 42/111 (37%), Gaps = 33/111 (29%)
Query: 71 LGGGRGGPSRR-APRAAQPPAQPCQLCGRSPLGEAPPGTPPCRLCCPATAPQEAPAPEGR 129
LG G GGP+ AP +A P SP +P PP P AP PAP
Sbjct: 177 LGTGDGGPAPPPAPSSASSSPSP------SPSSSSPSPPPPP----PPPAPPAPPAPRFD 226
Query: 130 ALG-----EEEEEPPRAGE-----------------GRPAGREEEEEEEEE 158
+E PP A E G P+ EEEEEEEEE
Sbjct: 227 IYDPFHPTDEAYSPPPAPEQKYDPFEPTGSNPSSSAGTPSPEEEEEEEEEE 277
Score = 35.0 bits (79), Expect = 0.038
Identities = 30/77 (38%), Positives = 32/77 (41%), Gaps = 11/77 (14%)
Query: 84 RAAQPPAQPCQLCGRSPLGEAPPGTPPCRLCCPATAPQEAPAPEGRALGEE--EEEPPRA 141
RAA+ P+ P P APP PP T PE L EE EE R
Sbjct: 969 RAAKVPSTP-------PPKAAPP--PPALTPDSQTVDSSCKTPEVSFLPEEATEEAGVRG 1019
Query: 142 GEGRPAGREEEEEEEEE 158
G EEEEEEEEE
Sbjct: 1020 GAEEEEEEEEEEEEEEE 1036
Score = 31.6 bits (70), Expect = 0.42
Identities = 29/81 (35%), Positives = 34/81 (41%), Gaps = 14/81 (17%)
Query: 78 PSRRAPRAAQPPAQPCQLCGRSPLGEAPPGTPPCRLCCPATAPQEAPAPEGRALGEEEEE 137
PS P+AA PP L S ++ TP P+EA G G EEEE
Sbjct: 974 PSTPPPKAAPPPPA---LTPDSQTVDSSCKTPEVSFL-----PEEATEEAGVRGGAEEEE 1025
Query: 138 PPRAGEGRPAGREEEEEEEEE 158
E EEEEEEEE+
Sbjct: 1026 EEEEEE------EEEEEEEEQ 1040
Score = 31.6 bits (70), Expect = 0.42
Identities = 13/22 (59%), Positives = 17/22 (77%)
Query: 42 SEEEEDEEEEEEETTDDPEYDP 63
+EEEE+EEEEEEE ++ E P
Sbjct: 1021 AEEEEEEEEEEEEEEEEEEQQP 1042
Score = 31.2 bits (69), Expect = 0.55
Identities = 13/34 (38%), Positives = 21/34 (61%)
Query: 27 PEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPE 60
PE +++ + EEEE+EEEEEEE ++ +
Sbjct: 1008 PEEATEEAGVRGGAEEEEEEEEEEEEEEEEEEQQ 1041
Score = 31.2 bits (69), Expect = 0.55
Identities = 13/22 (59%), Positives = 16/22 (72%)
Query: 38 SEPDSEEEEDEEEEEEETTDDP 59
+E + EEEE+EEEEEEE P
Sbjct: 1021 AEEEEEEEEEEEEEEEEEEQQP 1042
Score = 28.1 bits (61), Expect = 4.7
Identities = 20/66 (30%), Positives = 26/66 (39%), Gaps = 9/66 (13%)
Query: 39 EPDSEEEEDEEEEEEETTDD--------PEYDPGYKVKQRLGGGRGGPSRRAPR-AAQPP 89
E + EEEE+EEEE++ T P P G GP+ R + PP
Sbjct: 1027 EEEEEEEEEEEEEQQPATTTATSTAAAAPSTAPSAGSTAGDSGAEDGPASRVSQLPTLPP 1086
Query: 90 AQPCQL 95
P L
Sbjct: 1087 PMPWNL 1092
>gi|154759293 cysteine-rich hydrophobic domain 1 [Homo sapiens]
Length = 224
Score = 43.5 bits (101), Expect = 1e-04
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 8 AETGGYASLEEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPE 60
AE + LEE++E+ + S S ++S PD +EE++EEEEEEE ++ E
Sbjct: 9 AEFDTISELEEEEEEEAATSSSSPSSSSSVSGPDDDEEDEEEEEEEEEEEEEE 61
Score = 33.1 bits (74), Expect = 0.14
Identities = 18/51 (35%), Positives = 23/51 (45%)
Query: 3 ETREPAETGGYASLEEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEE 53
E E E +S +S + D E E + EEEE+EEEEEE
Sbjct: 18 EEEEEEEAATSSSSPSSSSSVSGPDDDEEDEEEEEEEEEEEEEEEEEEEEE 68
Score = 28.9 bits (63), Expect = 2.7
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 117 ATAPQEAPAPEGRALGEEEEEPPRAGEGRPAGREEEEEEEEE 158
A +P+ G +++E E EEEEEEEEE
Sbjct: 25 AATSSSSPSSSSSVSGPDDDEEDEEEEEEEEEEEEEEEEEEE 66
>gi|122937229 zinc finger protein 629 [Homo sapiens]
Length = 869
Score = 43.5 bits (101), Expect = 1e-04
Identities = 47/172 (27%), Positives = 61/172 (35%), Gaps = 27/172 (15%)
Query: 26 GPEHSSDSEYTLSEPDSEEEEDEEEE--EEETTDDPEYDPGYKVKQRLGGGRGGPSRRAP 83
GPE S + + +E ++EEE +E EE DP P K + R S + P
Sbjct: 14 GPEQSPNDAHRGAESENEEESPRQESSGEEIIMGDPAQSPESKDSTEMSLER---SSQDP 70
Query: 84 RAAQPPAQPCQLCGRSPLGEAPPGTPPCRLCCPATAPQEAPAPEGRALGEEE-------- 135
Q P P L +PL P PP AP+ P P E
Sbjct: 71 SVPQNP--PTPLGHSNPLDHQIPLDPP--------APEVVPTPSDWTKACEASWQWGALT 120
Query: 136 --EEPPRAGEGRPAGRE--EEEEEEEEGTYHCTECEDSFDNLGELHGHFMLH 183
PP P+ RE + E Y C EC SF +L H +H
Sbjct: 121 TWNSPPVVPANEPSLRELVQGRPAGAEKPYICNECGKSFSQWSKLLRHQRIH 172
Score = 29.3 bits (64), Expect = 2.1
Identities = 41/181 (22%), Positives = 62/181 (34%), Gaps = 30/181 (16%)
Query: 29 HSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYDPGYKVKQRLGGGRGGPSRRAPRAAQP 88
H ++ + S+ E E E+ + P + + G G PS P
Sbjct: 508 HMDENLFVCSDCGKAFLEAHELEQHRVIHERGKTPARRAQGDSLLGLGDPSLLTPPPGAK 567
Query: 89 PAQPCQLCG-------------RSPLGEAPPGTPPCRLCCPATAPQEAPAPEGRALGEEE 135
P + C +CG R +GE P + A P + +P G
Sbjct: 568 PHK-CLVCGKGFNDEGIFMQHQRIHIGENPYKNADGLIAHAAPKPPQLRSPRLPFRGNSY 626
Query: 136 EEPPRAGEGRPA--GREEEEEEEEEG-----------TYHCTECEDSFDNLGELHGHFML 182
P A EGR G+ + E +EG TY C+ C +SF + L H +
Sbjct: 627 ---PGAAEGRAEAPGQPLKPPEGQEGFSQRRGLLSSKTYICSHCGESFLDRSVLLQHQLT 683
Query: 183 H 183
H
Sbjct: 684 H 684
>gi|14249488 zinc finger and SCAN domain containing 10 [Homo
sapiens]
Length = 725
Score = 43.5 bits (101), Expect = 1e-04
Identities = 47/186 (25%), Positives = 67/186 (36%), Gaps = 22/186 (11%)
Query: 6 EPAETGGYASLEEDDEDLSPGPEHSSDS--EYTLSEPDSEEEEDEEEEEEE------TTD 57
+PAE G + + LSPGP+ + + E + P EE ++E T +
Sbjct: 135 QPAEPGQWRLPPSSKQPLSPGPQKTFQALQESSPQGPSPWPEESSRDQELAAVLECLTFE 194
Query: 58 DPEYDPGYKVKQRLGGGRGGPSRRAPRAAQP--PAQPCQLCGRSPLGEAPPGTP--PCRL 113
D + + LG G P + + +P A P + S PG P PC
Sbjct: 195 DVPENKAWPA-HPLGFGSRTPDKEEFKQEEPKGAAWPTPILAESQADS--PGVPGEPCAQ 251
Query: 114 CCPATAPQEAPAPEGRALGEEEEEPPRAGEGRPAGREEEEEEEEEGTYHCTECEDSFDNL 173
A P +G LG E + EG P E E + C +C SF L
Sbjct: 252 SLGRGAAASGPGEDGSLLGSSEILEVKVAEGVP-------EPNPELQFICADCGVSFPQL 304
Query: 174 GELHGH 179
L H
Sbjct: 305 SRLKAH 310
>gi|223941846 zinc finger protein 652 [Homo sapiens]
Length = 606
Score = 43.1 bits (100), Expect = 1e-04
Identities = 51/186 (27%), Positives = 68/186 (36%), Gaps = 36/186 (19%)
Query: 30 SSDSEYTLSEPDSEEEEDEEEEEEETTDDPEY--DPGYKVKQRLGGGRGGPSRRAPRAAQ 87
SS S+ T S EEE+EE EEE T D +Y + K K+++ RR RAA
Sbjct: 138 SSQSKETPVLKTSSEEEEEESEEEATDDSNDYGENEKQKKKEKIVEKVSVTQRRTRRAAS 197
Query: 88 PPAQPCQLCGRSPLGEAPPGTPPCRLCCPATAPQEAPAPEGRALGEEE-----EEPPRAG 142
A R+ G PP R A +E AP +A EE+ E+ PR
Sbjct: 198 VAAATTSPTPRTTRGRRKSVEPPKR---KKRATKEPKAPVQKAKCEEKETLTCEKCPRVF 254
Query: 143 E----------------------GRPAGREEE----EEEEEEGTYHCTECEDSFDNLGEL 176
G+ E E ++ + E C C SF L L
Sbjct: 255 NTRWYLEKHMNVTHRRMQICDKCGKKFVLESELSLHQQTDCEKNIQCVSCNKSFKKLWSL 314
Query: 177 HGHFML 182
H H +
Sbjct: 315 HEHIKI 320
>gi|7662384 zinc finger protein 652 [Homo sapiens]
Length = 606
Score = 43.1 bits (100), Expect = 1e-04
Identities = 51/186 (27%), Positives = 68/186 (36%), Gaps = 36/186 (19%)
Query: 30 SSDSEYTLSEPDSEEEEDEEEEEEETTDDPEY--DPGYKVKQRLGGGRGGPSRRAPRAAQ 87
SS S+ T S EEE+EE EEE T D +Y + K K+++ RR RAA
Sbjct: 138 SSQSKETPVLKTSSEEEEEESEEEATDDSNDYGENEKQKKKEKIVEKVSVTQRRTRRAAS 197
Query: 88 PPAQPCQLCGRSPLGEAPPGTPPCRLCCPATAPQEAPAPEGRALGEEE-----EEPPRAG 142
A R+ G PP R A +E AP +A EE+ E+ PR
Sbjct: 198 VAAATTSPTPRTTRGRRKSVEPPKR---KKRATKEPKAPVQKAKCEEKETLTCEKCPRVF 254
Query: 143 E----------------------GRPAGREEE----EEEEEEGTYHCTECEDSFDNLGEL 176
G+ E E ++ + E C C SF L L
Sbjct: 255 NTRWYLEKHMNVTHRRMQICDKCGKKFVLESELSLHQQTDCEKNIQCVSCNKSFKKLWSL 314
Query: 177 HGHFML 182
H H +
Sbjct: 315 HEHIKI 320
>gi|31543392 peroxisome proliferator-activated receptor gamma,
coactivator 1 beta [Homo sapiens]
Length = 1023
Score = 43.1 bits (100), Expect = 1e-04
Identities = 35/111 (31%), Positives = 47/111 (42%), Gaps = 23/111 (20%)
Query: 15 SLEEDDEDLSPGPEHSS---DSEYTLSE----PDSEEEEDEEEEEEETTDDPEYDPGYKV 67
+LEE+D PE+ + DS + E P+ EEEE EEEEE++ +D P
Sbjct: 774 ALEEEDLASCKSPEYDTVFEDSSSSSGESSFLPEEEEEEGEEEEEDDEEEDSGVSPTC-- 831
Query: 68 KQRLGGGRGGPSRRAPRAAQPPAQPCQLCGRSPLGEAPPGTPPCRLCCPAT 118
S P + P QLC RS + G+ PC PAT
Sbjct: 832 -----------SDHCPYQSPPSKANRQLCSRS---RSSSGSSPCHSWSPAT 868
Score = 30.4 bits (67), Expect = 0.94
Identities = 12/24 (50%), Positives = 18/24 (75%)
Query: 37 LSEPDSEEEEDEEEEEEETTDDPE 60
L + + E+EE+EEEEEEE ++ E
Sbjct: 426 LQQQEEEDEEEEEEEEEEEKEEEE 449
Score = 30.4 bits (67), Expect = 0.94
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 7/54 (12%)
Query: 39 EPDSEEEEDEEEEEEETTDDPEYDPGYKVKQRLGGGRGGPSRRAPRAAQPPAQP 92
+ + +EEE+EEEEEEE ++ E+ R GRG P + R + P
Sbjct: 429 QEEEDEEEEEEEEEEEKEEEEEWG-------RKRPGRGLPWTKLGRKLESSVCP 475
Score = 28.1 bits (61), Expect = 4.7
Identities = 15/42 (35%), Positives = 20/42 (47%)
Query: 117 ATAPQEAPAPEGRALGEEEEEPPRAGEGRPAGREEEEEEEEE 158
+T P+ + P + E P R + EEEEEEEEE
Sbjct: 402 STGPRPSLRPLRLEVKREVRRPARLQQQEEEDEEEEEEEEEE 443
Score = 28.1 bits (61), Expect = 4.7
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 27 PEHSSDSEYTLSEPDSEEEEDEEEEEEE 54
P E E + EEEE+E+EEEEE
Sbjct: 423 PARLQQQEEEDEEEEEEEEEEEKEEEEE 450
Score = 27.3 bits (59), Expect = 7.9
Identities = 31/115 (26%), Positives = 38/115 (33%), Gaps = 23/115 (20%)
Query: 13 YASLEEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYDPGYKVKQRLG 72
+ L+ E+ P S + L + DSE E E + D PE D G L
Sbjct: 58 FGELQWCPENSETEPNQYSPDDSELFQIDSENEALLAELTKTLDDIPEDDVGLAAFPALD 117
Query: 73 GGRGGPSRRAPRAAQPPAQPCQLCGRSPLGEAPPGTPPCRLCCPATAPQEAPAPE 127
GG A C + AP PP PA APAPE
Sbjct: 118 GG--------------DALSC-----TSASPAPSSAPP----SPAPEKPSAPAPE 149
Score = 27.3 bits (59), Expect = 7.9
Identities = 17/42 (40%), Positives = 20/42 (47%), Gaps = 9/42 (21%)
Query: 127 EGRALGEEEEEPPRAGEGRPAGREEEEEEEEEGTYHCTECED 168
E L EEEEE G EEEE++EEE + C D
Sbjct: 801 ESSFLPEEEEEE---------GEEEEEDDEEEDSGVSPTCSD 833
>gi|5031855 lymphocyte cytosolic protein 2 [Homo sapiens]
Length = 533
Score = 42.7 bits (99), Expect = 2e-04
Identities = 39/149 (26%), Positives = 52/149 (34%), Gaps = 26/149 (17%)
Query: 2 TETREPAETGGYASLEEDDEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEY 61
TE+ E + GG++S EEDD + P D E D + E EEEE DD +Y
Sbjct: 95 TESHEE-DNGGWSSFEEDDYE---SPNDDQDGE-----DDGDYESPNEEEEAPVEDDADY 145
Query: 62 DPGYKVKQRLGGGRGGPSRRAPRAAQP---PAQPCQLCGRSPLGEAPPGTPPCRLCCPAT 118
+P P A Q PA+P + P G P + P
Sbjct: 146 EP--------------PPSNDEEALQNSILPAKPFPNSNSMYIDRPPSGKTPQQPPVPPQ 191
Query: 119 APQEAPAPEGRALGEEEEEPPRAGEGRPA 147
P A P PP+ P+
Sbjct: 192 RPMAALPPPPAGRNHSPLPPPQTNHEEPS 220
>gi|4885193 AT rich interactive domain 3A (BRIGHT- like) protein
[Homo sapiens]
Length = 593
Score = 42.7 bits (99), Expect = 2e-04
Identities = 44/133 (33%), Positives = 56/133 (42%), Gaps = 11/133 (8%)
Query: 20 DEDLSPGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYDPGYKVKQRLGGGRGGPS 79
DED+ P E + E L E + EEEED E+EEEE ++ P G G +
Sbjct: 120 DEDMKPKWEEE-EMEEDLGEDEEEEEEDYEDEEEEEDEEGLGPP--------GPASLGTT 170
Query: 80 RRAPRAAQPP-AQPCQLCGRSPLGEAPPGTPPCRLCCPA-TAPQEAPAPEGRALGEEEEE 137
PR AQPP A R G+ PG P A APQ P G EE+ +
Sbjct: 171 ALFPRKAQPPQAFRGDGVPRVLGGQERPGPGPAHPGGAAHVAPQLQPPDHGDWTYEEQFK 230
Query: 138 PPRAGEGRPAGRE 150
+G P +E
Sbjct: 231 QLYELDGDPKRKE 243
Score = 29.3 bits (64), Expect = 2.1
Identities = 42/156 (26%), Positives = 56/156 (35%), Gaps = 21/156 (13%)
Query: 36 TLSEPDSEEEEDEEEEEEETTDDPEYDPGYKVKQRLGGGRGGPSRRAPRAAQPPAQPCQL 95
TL + ++ E ++ D P PG + + R S R RA Q A
Sbjct: 9 TLLQRQQRARQELEARQQLPPDPPAAPPG-RARAAPDEDREPESARMQRA-QMAALAAMR 66
Query: 96 CGRSPLGEAPPGTPPCRLCCPATAPQEAPAPEG---------RALGEEEEEPPRAGEGRP 146
+ LG P +P P + +E A EG GEE E + E
Sbjct: 67 AAAAGLGH--PASPGGSEDGPPGSEEEDAAREGTPGSPGRGREGPGEEHFEDMASDEDMK 124
Query: 147 AGREEEE--------EEEEEGTYHCTECEDSFDNLG 174
EEEE EEEEE Y E E+ + LG
Sbjct: 125 PKWEEEEMEEDLGEDEEEEEEDYEDEEEEEDEEGLG 160
>gi|32455273 WNK lysine deficient protein kinase 2 [Homo sapiens]
Length = 2217
Score = 42.4 bits (98), Expect = 2e-04
Identities = 46/170 (27%), Positives = 61/170 (35%), Gaps = 25/170 (14%)
Query: 6 EPAETGGYASLEEDDEDLS-PGPEHSSDSEYTLSEPDSEEEEDEEEEEEETTDDPEYDPG 64
EP G A + E + PGP+ E + EE E + P P
Sbjct: 16 EPGRGAGPAGMAEPRAKAARPGPQRFLRRSVV-------ESDQEEPPGLEAAEAPGPQPP 68
Query: 65 YKVKQRL-----------GGGRGGPSRRAPRA--AQP--PAQPCQLCGRSPLGEAPPGTP 109
+++R+ RG P+ AP A AQP P P G P+G PG
Sbjct: 69 QPLQRRVLLLCKTRRLIAERARGRPAAPAPAALVAQPGAPGAPAD-AGPEPVGTQEPGPD 127
Query: 110 PCRLCCP-ATAPQEAPAPEGRALGEEEEEPPRAGEGRPAGREEEEEEEEE 158
P A AP P E A +E+E + P +E EEEE
Sbjct: 128 PIAAAVETAPAPDGGPREEAAATVRKEDEGAAEAKPEPGRTRRDEPEEEE 177
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.304 0.131 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,629,636
Number of Sequences: 37866
Number of extensions: 979454
Number of successful extensions: 27292
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 898
Number of HSP's successfully gapped in prelim test: 1053
Number of HSP's that attempted gapping in prelim test: 10524
Number of HSP's gapped (non-prelim): 10826
length of query: 188
length of database: 18,247,518
effective HSP length: 96
effective length of query: 92
effective length of database: 14,612,382
effective search space: 1344339144
effective search space used: 1344339144
T: 11
A: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.