Guide to the Human Genome
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Name: KIAA1199 Sequence: fasta or formatted (1361aa) NCBI GI: 38638698
Description:

KIAA1199

Not currently referenced in the text

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.4         73           3
 C cysteine            2.0         27           1
 D aspartate           6.2         85           2
 E glutamate           4.6         62           2
 F phenylalanine       5.0         68           2
 G glycine             9.0        123           2
 H histidine           4.1         56           2
 I isoleucine          5.8         79           2
 K lysine              6.2         84           4
 L leucine             7.6        103           3
 M methionine          2.1         28           2
 N asparagine          4.4         60           3
 P proline             5.1         70           2
 Q glutamine           3.6         49           2
 R arginine            4.9         67           1
 S serine              6.6         90           3
 T threonine           5.3         72           2
 V valine              6.4         87           3
 W tryptophan          2.0         27           1
 Y tyrosine            3.7         51           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   KIAA1199 
TMEM2                 0.308   transmembrane protein 2 isoform a 
TMEM2                 0.285   transmembrane protein 2 isoform b 
PKHD1L1               0.041   fibrocystin L 
POMGNT1               0.015   O-linked mannose beta1,2-N-acetylglucosaminyltransf...
PKHD1                 0.013   fibrocystin isoform 2 
PKHD1                 0.013   fibrocystin isoform 1 
FAM3C                 0.012   family with sequence similarity 3, member C precurso...
FAM3C                 0.012   family with sequence similarity 3, member C precursor...
FAM3D                 0.011   family with sequence similarity 3, member D 
FAM3A                 0.009   family 3, member A protein 
FAM3B                 0.008   family with sequence similarity 3, member B isoform ...
FAM3B                 0.008   family with sequence similarity 3, member B isoform ...
MUC5AC                0.007   mucin 5AC 
MUC5B                 0.007   mucin 5, subtype B, tracheobronchial 
CILP                  0.006   cartilage intermediate layer protein 
CILP2                 0.006   cartilage intermediate layer protein 2 
APC                   0.005   adenomatous polyposis coli 
APC                   0.005   adenomatous polyposis coli 
APC                   0.005   adenomatous polyposis coli 
LOC100132635          0.003   PREDICTED: similar to mucin 5, partial 
GALC                  0.003   galactosylceramidase isoform a precursor 
GALC                  0.003   galactosylceramidase isoform b precursor 
LOC100293983          0.003   PREDICTED: similar to mucin, partial 
PPWD1                 0.003   peptidylprolyl isomerase domain and WD repeat contai...
POTEE                 0.002   protein expressed in prostate, ovary, testis, and p...
LOC653781             0.002   PREDICTED: similar to protein expressed in prostate...
LOC653269             0.002   PREDICTED: similar to protein expressed in prostate,...
CHADL                 0.002   chondroadherin-like 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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