Guide to the Human Genome
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Name: FAM3B Sequence: fasta or formatted (235aa) NCBI GI: 46255030
Description:

family with sequence similarity 3, member B isoform a

Not currently referenced in the text

Other entries for this name:
alt prot {187aa} family with sequence similarity 3, member B isoform b
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.4         22           2
 C cysteine            2.6          6           1
 D aspartate           4.3         10           2
 E glutamate           5.5         13           1
 F phenylalanine       3.4          8           1
 G glycine             7.7         18           3
 H histidine           0.9          2           1
 I isoleucine          6.8         16           1
 K lysine              6.4         15           1
 L leucine             8.5         20           2
 M methionine          2.6          6           1
 N asparagine          5.5         13           2
 P proline             5.5         13           1
 Q glutamine           2.1          5           1
 R arginine            6.0         14           1
 S serine              8.5         20           2
 T threonine           3.4          8           1
 V valine              5.1         12           2
 W tryptophan          1.7          4           1
 Y tyrosine            4.3         10           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   family with sequence similarity 3, member B isoform ... 
FAM3B                 0.780   family with sequence similarity 3, member B isoform ...
FAM3C                 0.273   family with sequence similarity 3, member C precurso...
FAM3C                 0.273   family with sequence similarity 3, member C precursor...
FAM3A                 0.253   family 3, member A protein 
FAM3D                 0.240   family with sequence similarity 3, member D 
POMGNT1               0.086   O-linked mannose beta1,2-N-acetylglucosaminyltransf...
KIAA1199              0.053   KIAA1199 
TMEM2                 0.026   transmembrane protein 2 isoform b 
TMEM2                 0.026   transmembrane protein 2 isoform a 
VNN1                  0.011   vanin 1 precursor 
SOS2                  0.007   son of sevenless homolog 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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