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Search of human proteins with 38488727
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens]
(334 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens] 644 0.0
gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo s... 100 2e-21
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi... 96 6e-20
gi|154146223 splicing factor, arginine/serine-rich 130 [Homo sap... 95 8e-20
gi|116089325 splicing factor, arginine/serine-rich 12 isoform a ... 95 8e-20
gi|21040255 splicing factor, arginine/serine-rich 12 isoform b [... 95 8e-20
gi|154146193 splicing factor, arginine/serine-rich 130 [Homo sap... 95 8e-20
gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens] 93 4e-19
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 92 5e-19
gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo s... 92 5e-19
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens] 89 5e-18
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens] 87 2e-17
gi|224548936 hypothetical protein LOC100170229 [Homo sapiens] 87 2e-17
gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens] 87 3e-17
gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain ... 85 1e-16
gi|42560244 peptidylprolyl isomerase G [Homo sapiens] 84 1e-16
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 82 5e-16
gi|52426743 cisplatin resistance-associated overexpressed protei... 81 1e-15
gi|19923485 cisplatin resistance-associated overexpressed protei... 81 1e-15
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 80 2e-15
gi|239747891 PREDICTED: hypothetical protein [Homo sapiens] 79 4e-15
gi|116812577 LUC7-like 2 [Homo sapiens] 79 6e-15
gi|134152708 arginine and glutamate rich 1 [Homo sapiens] 79 7e-15
gi|239749449 PREDICTED: hypothetical protein [Homo sapiens] 78 1e-14
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens] 78 1e-14
gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapi... 78 1e-14
gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens] 77 2e-14
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens] 77 3e-14
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens] 76 4e-14
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens] 76 4e-14
>gi|38488727 arginine/serine-rich coiled-coil 1 [Homo sapiens]
Length = 334
Score = 644 bits (1662), Expect = 0.0
Identities = 334/334 (100%), Positives = 334/334 (100%)
Query: 1 MGRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSH 60
MGRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSH
Sbjct: 1 MGRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSH 60
Query: 61 SYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRS 120
SYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRS
Sbjct: 61 SYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRS 120
Query: 121 SERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPA 180
SERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPA
Sbjct: 121 SERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPA 180
Query: 181 EQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIEAIESDSF 240
EQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIEAIESDSF
Sbjct: 181 EQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIEAIESDSF 240
Query: 241 VQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKEIDPTSIPTAIKYQDDNSL 300
VQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKEIDPTSIPTAIKYQDDNSL
Sbjct: 241 VQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKEIDPTSIPTAIKYQDDNSL 300
Query: 301 AHPNLFIEKADAEEKWFKRLIALRQERLMGSPVA 334
AHPNLFIEKADAEEKWFKRLIALRQERLMGSPVA
Sbjct: 301 AHPNLFIEKADAEEKWFKRLIALRQERLMGSPVA 334
>gi|38146107 arginine/serine-rich coiled-coil 2 isoform a [Homo
sapiens]
Length = 434
Score = 100 bits (249), Expect = 2e-21
Identities = 73/236 (30%), Positives = 122/236 (51%), Gaps = 21/236 (8%)
Query: 12 SRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSW----SRDLQPRSHSYDRRRR 67
SRS+ + + R+R S + R+ SR K GR+ SK +S S + + HS D+ R
Sbjct: 41 SRSRSRSRERKRKSDNEGRKHRSRSRSKEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRE 100
Query: 68 HRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSERSSHR 127
+SS + +++ R SRGR S RSRS+ R RSRSR R +S SRS ER +
Sbjct: 101 RLNSSENGEDRHKRKERKSSRGRSHS----RSRSRERRHRSRSRERKKSRSRSRER---K 153
Query: 128 RTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIK-------RGESGNIKAGLEHLPPA 180
++RSRSR+R++ + R +E++ + + + + + H + R S + K +E
Sbjct: 154 KSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRTRSRSRTRSRSRDRKKRIEKPRRF 213
Query: 181 EQAKARLQL--VLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIEA 234
++ +R A +A +A R E AK+ +E+ + +VE+ K+ +EI A
Sbjct: 214 SRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQEQREKEMVEKQKQ-QEIAA 268
Score = 95.9 bits (237), Expect = 4e-20
Identities = 81/235 (34%), Positives = 114/235 (48%), Gaps = 23/235 (9%)
Query: 2 GRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHS 61
GRR ++ S+ + ++H + SS R S + G + + K R SR + S S
Sbjct: 70 GRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRG-RSHSRS 128
Query: 62 YDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSS 121
R RRHRS S RK+SRSRSR R KS R R KSR+R + R+RS SRS
Sbjct: 129 RSRERRHRSRSRE-----RKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSR 183
Query: 122 ERSSHRRTRSRSRDRERRKGRDKEKR-EKEKDKGKDKELHNIKRGESGNIKAGLEHLPPA 180
R H RTRSRSR R R RD++KR EK + + ++ R S G A
Sbjct: 184 SRHRH-RTRSRSRTRSR--SRDRKKRIEKPR-----RFSRSLSRTPSPPPFRGRNTAMDA 235
Query: 181 EQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIEAI 235
++A AR LE A K E +R +E +++K+++ A V + A+
Sbjct: 236 QEALARR---LERAKKLQE-----QREKEMVEKQKQQEIAAAAATGGSVLNVAAL 282
Score = 66.6 bits (161), Expect = 3e-11
Identities = 65/292 (22%), Positives = 119/292 (40%), Gaps = 29/292 (9%)
Query: 9 EEESRSKRKKKHRRRSSSSSSSDSRTYSRKKG-GRKSRSKSRSWSRDLQPRSHSYD-RRR 66
E+ S + KKK + S S + YSR + R+ + KS + R + RS S + RR
Sbjct: 14 EKTSPDRDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKHRSRSRSKEGRRH 73
Query: 67 RHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSERSSH 126
+ SS + S + S +G R + + S++ R + + R S RS RS
Sbjct: 74 ESKDKSSKKHKSEEHNDKEHSSDKG---RERLNSSENGEDRHKRKERKSSRGRSHSRSRS 130
Query: 127 RRTRSRSRDRERRKGRDKEK---------REKEKDKGKDKELHNIKRGESGNIKAGLEHL 177
R R RSR RER+K R + + RE++K + + +E R S +
Sbjct: 131 RERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRHRT 190
Query: 178 PPAEQAKARLQLVLEAAAKADEALKAKERNEE----EAKRRKEEDQATLVEQVKRVKEIE 233
+ ++R + + K ++ R + + Q L +++R K+++
Sbjct: 191 RSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAKKLQ 250
Query: 234 AIESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKEIDP 285
+ KE+ + + E+ A +T G VA ++ ++ P
Sbjct: 251 E-----------QREKEMVEKQKQQEIAAAAATGGSVLNVAALLASGTQVTP 291
Score = 42.7 bits (99), Expect = 5e-04
Identities = 42/222 (18%), Positives = 93/222 (41%), Gaps = 9/222 (4%)
Query: 63 DRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRT--RRSRSRPRLRSHSRS 120
D R + +S +K+ +S ++ + SRS+SR+ R+ +S R H
Sbjct: 5 DTERDGLAPEKTSPDRDKKKEQSEVSVSPRASKHHYSRSRSRSRERKRKSDNEGRKHRSR 64
Query: 121 SERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPA 180
S RR S+ + ++ K + +E DKG+++ L++ + GE + + +
Sbjct: 65 SRSKEGRRHESKDKSSKKHKSEEHNDKEHSSDKGRER-LNSSENGEDRHKRKERKSSRGR 123
Query: 181 EQAKARLQLVLEAAAKADEALKAKERNEEEAK-----RRKEEDQATLVEQVKRVKEIEAI 235
+++R + +++ E K++ R+ E K R +++ ++ E+ +R++
Sbjct: 124 SHSRSRSR-ERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRS 182
Query: 236 ESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPP 277
S + RS + +++ S S PP
Sbjct: 183 RSRHRHRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPP 224
>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
sapiens]
Length = 674
Score = 95.5 bits (236), Expect = 6e-20
Identities = 84/268 (31%), Positives = 116/268 (43%), Gaps = 33/268 (12%)
Query: 2 GRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGG-----RKSRSKSRSWSRDLQ 56
GR +S S S R SSS SSS S + SR+ GG R +RS+SRSWSR +
Sbjct: 368 GRNASARRRSSSSSSSSSASRTSSSRSSSRSSSRSRRGGGYYRSGRHARSRSRSWSRS-R 426
Query: 57 PRSHSYDRRR---RHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPR 113
RS Y R R R S S G R RS +R G G R RSRS S R R
Sbjct: 427 SRSRRYSRSRSRGRRHSGGGSRDGHRYSRSPARRGGYGPRRR-SRSRSHSGDRYRRGGRG 485
Query: 114 LRSHSRSSERSSHRRTRSRSRDRERRKGRD---KEKREKEKDKGKD-------------- 156
LR HS S RSS + SRSR R + + R + + + +
Sbjct: 486 LRHHSSSRSRSSWSLSPSRSRSLTRSRSHSPSPSQSRSRSRSRSQSPSPSPAREKLTRPA 545
Query: 157 ------KELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEE 210
++L + A L P E+ K R+Q L KAD+ ++ ++E
Sbjct: 546 ASPAVGEKLKKTEPAAGKETGAAKPKLTPQEKLKLRMQKALNRQFKADKKAAQEKMIQQE 605
Query: 211 AKRRKEEDQATLVEQVKRVKEIEAIESD 238
+R++ ED+ + + R+KE E E +
Sbjct: 606 HERQEREDELRAMARKIRMKERERREKE 633
Score = 59.3 bits (142), Expect = 5e-09
Identities = 72/265 (27%), Positives = 93/265 (35%), Gaps = 84/265 (31%)
Query: 2 GRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSR-KKGGRKSRSKSRSWSRDLQPR-- 58
GRRS E R KR + + S + DS TY K+ +S S+SRS SR P
Sbjct: 264 GRRSRRQRREFREKRLRGRKISPPSYARRDSPTYDPYKRSPSESSSESRSRSRSPTPGRE 323
Query: 59 --------------------------------------------SHSYDRRRRHRSSSSS 74
+ RRR SSSSS
Sbjct: 324 EKITFITSFGGSDEEAAAAAAAAAASGVTTGKPPAPPQPGGPAPGRNASARRRSSSSSSS 383
Query: 75 SYGSRRKRSRSRSRGRGKSYRV-------------QRSRSKSRTRR---SRSRPRLRSHS 118
S SR SRS SR +S R RS S+SR+R SRSR R R HS
Sbjct: 384 SSASRTSSSRSSSRSSSRSRRGGGYYRSGRHARSRSRSWSRSRSRSRRYSRSRSRGRRHS 443
Query: 119 RSSERSSHR-----------------RTRSRSRDRERRKGRDKEKREKEKDKGKDKELHN 161
R HR R+RS S DR RR GR + + + +
Sbjct: 444 GGGSRDGHRYSRSPARRGGYGPRRRSRSRSHSGDRYRRGGRGL----RHHSSSRSRSSWS 499
Query: 162 IKRGESGNIKAGLEHLPPAEQAKAR 186
+ S ++ H P Q+++R
Sbjct: 500 LSPSRSRSLTRSRSHSPSPSQSRSR 524
Score = 46.6 bits (109), Expect = 3e-05
Identities = 43/166 (25%), Positives = 74/166 (44%), Gaps = 17/166 (10%)
Query: 4 RSSDTEEESRSKRKKKHRRRSSSSSS-------SDSRTYSRKKGGRKSRSKSRSWSRDLQ 56
RS + R R +H S S SS S S T SR S+S+SRS SR
Sbjct: 472 RSHSGDRYRRGGRGLRHHSSSRSRSSWSLSPSRSRSLTRSRSHSPSPSQSRSRSRSRSQS 531
Query: 57 PRSHSYDRRRRHRSSSSSSYGSRRKRSR---SRSRGRGKSYRVQRSRSKSRTRRSRSRPR 113
P S S R + R ++S + G + K++ + G K + + K R +++ +R
Sbjct: 532 P-SPSPAREKLTRPAASPAVGEKLKKTEPAAGKETGAAKPKLTPQEKLKLRMQKALNRQF 590
Query: 114 LRSHSRSSERSSHRRTRSRSRDRERR------KGRDKEKREKEKDK 153
+ E+ + + R+ E R + +++E+REKE+++
Sbjct: 591 KADKKAAQEKMIQQEHERQEREDELRAMARKIRMKERERREKEREE 636
Score = 35.4 bits (80), Expect = 0.072
Identities = 55/218 (25%), Positives = 73/218 (33%), Gaps = 64/218 (29%)
Query: 7 DTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRR 66
D EE K K + S SR R+ ++ R + S + S +YD +
Sbjct: 242 DKEEAEAIKHAKALEEEKAMYSGRRSRRQRREFREKRLRGRKISPPSYARRDSPTYDPYK 301
Query: 67 RHRSSSSSSYGSRRKRSRSRSRGR------------------------------------ 90
R S SSS R RSRS + GR
Sbjct: 302 RSPSESSS---ESRSRSRSPTPGREEKITFITSFGGSDEEAAAAAAAAAASGVTTGKPPA 358
Query: 91 ---------GKSYRVQRSRSKSRTRRSRSR-PRLRSHSRSSERS--------------SH 126
G++ +R S S + S SR RS SRSS RS S
Sbjct: 359 PPQPGGPAPGRNASARRRSSSSSSSSSASRTSSSRSSSRSSSRSRRGGGYYRSGRHARSR 418
Query: 127 RRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKR 164
R+ SRSR R RR R + R + G ++ H R
Sbjct: 419 SRSWSRSRSRSRRYSRSR-SRGRRHSGGGSRDGHRYSR 455
Score = 35.4 bits (80), Expect = 0.072
Identities = 20/52 (38%), Positives = 28/52 (53%)
Query: 1 MGRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWS 52
M R+ E E R K +++ R+ S S S S YSR+ + RS+SRS S
Sbjct: 618 MARKIRMKERERREKEREEWERQYSRQSRSPSPRYSREYSSSRRRSRSRSRS 669
Score = 34.7 bits (78), Expect = 0.12
Identities = 26/98 (26%), Positives = 41/98 (41%), Gaps = 5/98 (5%)
Query: 42 RKSRSKSRSWSRDLQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRS 101
R ++ +R + D + ++ R + ++ R + R R + R + R
Sbjct: 581 RMQKALNRQFKADKKAAQEKMIQQEHERQEREDELRAMARKIRMKERERREKEREEWERQ 640
Query: 102 KSRTRRSRSRPRLRSHSRSSERSSHRRTRSRSRDRERR 139
SR RS S R +S SS RR+RSRSR R
Sbjct: 641 YSRQSRSPSPRYSREYS-----SSRRRSRSRSRSPHYR 673
Score = 30.0 bits (66), Expect = 3.0
Identities = 21/83 (25%), Positives = 31/83 (37%), Gaps = 6/83 (7%)
Query: 6 SDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRR 65
+D + +++H R+ R K + + W R +S S R
Sbjct: 592 ADKKAAQEKMIQQEHERQEREDELRAMARKIRMKERERREKEREEWERQYSRQSRSPSPR 651
Query: 66 RRHRSSSSSSYGSRRKRSRSRSR 88
S Y S R+RSRSRSR
Sbjct: 652 ------YSREYSSSRRRSRSRSR 668
Score = 29.6 bits (65), Expect = 3.9
Identities = 23/106 (21%), Positives = 48/106 (45%), Gaps = 7/106 (6%)
Query: 8 TEEESRSKRKKK--HRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRR 65
T +E R +K +R+ + ++ + ++ ++ + R+ +R ++ + +RR
Sbjct: 573 TPQEKLKLRMQKALNRQFKADKKAAQEKMIQQEHERQEREDELRAMARKIRMKER--ERR 630
Query: 66 RRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSR 111
+ R Y ++SRS S + Y R RS+SR+R R
Sbjct: 631 EKEREEWERQYS---RQSRSPSPRYSREYSSSRRRSRSRSRSPHYR 673
>gi|154146223 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 95.1 bits (235), Expect = 8e-20
Identities = 87/286 (30%), Positives = 134/286 (46%), Gaps = 18/286 (6%)
Query: 7 DTEEESRSKRKKKHRRRSSSSS---SSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYD 63
+ ++E + K K+ R SSSS SS+SRT S S S S S RS S
Sbjct: 494 EPKKEHKEKEKQGRSRSGSSSSGSSSSNSRTSSTSSTVSSSSYSSSSGSSRTSSRSSSPK 553
Query: 64 RRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSER 123
R++RH S S + +RR RSRS SR R+R K R RR +R + R +
Sbjct: 554 RKKRHSRSRSPTIKARRSRSRSYSRRI--KIESNRARVKIRDRRRSNRNSIERERRRNRS 611
Query: 124 SSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGE-SGNIKAGLEHLPPAEQ 182
S R RSRSR R+RR R R +++ K D +RG SGN E+
Sbjct: 612 PSRERRRSRSRSRDRRTNRASRSRSRDRRKIDD------QRGNLSGNSHKHKGEAKEQER 665
Query: 183 AKARLQLVLEAAAKADEALKAKERNEEEAKRRKEED--QATLVEQVKRVKEIEAI--ESD 238
K R + + + K D+ + ++ +E ++R+E+D ++ +++KR +E E S
Sbjct: 666 KKERSRSIDKDRKKKDKEREREQDKRKEKQKREEKDFKFSSQDDRLKRKRESERTFSRSG 725
Query: 239 SFVQQTFR--SSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKE 282
S + R S ++ KKS K + S S S+ P S++++
Sbjct: 726 SISVKIIRHDSRQDSKKSTTKDSKKHSGSDSSGRSSSESPGSSKEK 771
Score = 83.2 bits (204), Expect = 3e-16
Identities = 70/224 (31%), Positives = 112/224 (50%), Gaps = 16/224 (7%)
Query: 5 SSDTEEESRS-KRKKKHRRRSS---SSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSH 60
SS T S S KRKK+H R S + S SR+YSR+ +R++ + R R+
Sbjct: 542 SSRTSSRSSSPKRKKRHSRSRSPTIKARRSRSRSYSRRIKIESNRARVKIRDRRRSNRNS 601
Query: 61 SYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRL----RS 116
RRR+RS S R+RSRSRSR R ++ R RSRS+ R + R L
Sbjct: 602 IERERRRNRSPS-----RERRRSRSRSRDR-RTNRASRSRSRDRRKIDDQRGNLSGNSHK 655
Query: 117 HSRSSERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEH 176
H ++ ++ RSRS D++R+K +DKE RE+E+DK K+K+ K + + L+
Sbjct: 656 HKGEAKEQERKKERSRSIDKDRKK-KDKE-REREQDKRKEKQKREEKDFKFSSQDDRLKR 713
Query: 177 LPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQA 220
+E+ +R + + D +K+ +++K+ D +
Sbjct: 714 KRESERTFSRSGSISVKIIRHDSRQDSKKSTTKDSKKHSGSDSS 757
Score = 48.1 bits (113), Expect = 1e-05
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 16/168 (9%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSY 62
RR D + + S KH+ + R+ S K RK + K R +D +
Sbjct: 639 RRKIDDQRGNLSGNSHKHKGEAKEQERKKERSRSIDKD-RKKKDKEREREQDKRKEKQKR 697
Query: 63 DRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRP-RLRSHSRSS 121
+ + SS +R+ R+ SR S ++ R S+ +++S ++ + S S SS
Sbjct: 698 EEKDFKFSSQDDRLKRKRESERTFSRSGSISVKIIRHDSRQDSKKSTTKDSKKHSGSDSS 757
Query: 122 ERSSH--------------RRTRSRSRDRERRKGRDKEKREKEKDKGK 155
RSS + +RSRS ++ +R G+ ++ K K + +
Sbjct: 758 GRSSSESPGSSKEKKAKKPKHSRSRSVEKSQRSGKKASRKHKSKSRSR 805
Score = 35.4 bits (80), Expect = 0.072
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 2 GRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRS 50
GR SS++ S+ K+ KK + S S R S KK RK +SKSRS
Sbjct: 758 GRSSSESPGSSKEKKAKKPKHSRSRSVEKSQR--SGKKASRKHKSKSRS 804
Score = 31.6 bits (70), Expect = 1.0
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 192 EAAAKADEALKAKERNEEEAKRRKEEDQATL----VEQVKRVKEIEAIESDSFVQQTFRS 247
E++ DE L+ + R ++EA RKE++Q L +E+ K+ E E + F+ + S
Sbjct: 406 ESSDTDDEELRHRIRQKQEAFWRKEKEQQLLHDKQMEEEKQQTERVTKEMNEFIHKEQNS 465
Query: 248 SKEVK-KSVEPSEVKQATSTSGPASAVADPPSTEKE 282
++ + + V + T ++V +P KE
Sbjct: 466 LSLLEAREADGDVVNEKKRTPNETTSVLEPKKEHKE 501
>gi|116089325 splicing factor, arginine/serine-rich 12 isoform a
[Homo sapiens]
Length = 624
Score = 95.1 bits (235), Expect = 8e-20
Identities = 87/324 (26%), Positives = 141/324 (43%), Gaps = 46/324 (14%)
Query: 2 GRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHS 61
GR S T +SRS K H RR S S SR+++R + +K R +S+S + RS S
Sbjct: 306 GRSRSHTRSKSRSS-SKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKK---RSKS 361
Query: 62 YDRRR-RHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTR-RSRSRPRLRSHSR 119
+RR+ R RS S R++ + + R + K +R R K R + + R + + R R
Sbjct: 362 RERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKER 421
Query: 120 SSERSSHR-RTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLP 178
+R + + R R R++E K RDKEK EKE+DK K++E K + K P
Sbjct: 422 EKDREKDKEKDREREREKEHEKDRDKEK-EKEQDKEKEREKDRSKEIDEKRKKDKKSRTP 480
Query: 179 P------------AEQAKARLQLVLEAAAKADEALKAKE--------RNEEEAKRRKEED 218
P + + + R + + + +K K RN+++ KR KE D
Sbjct: 481 PRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERD 540
Query: 219 QATLVEQVKRVKEIEAIESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPS 278
+ + +R + +D R KE K + +K+ P S+V+
Sbjct: 541 HISERRERERSTSMRKSSND-------RDGKE-KLEKNSTSLKEKEHNKEPDSSVS---- 588
Query: 279 TEKEIDPTSIPTAIKYQDDNSLAH 302
KE+D P ++N + H
Sbjct: 589 --KEVDDKDAPRT----EENKIQH 606
Score = 88.6 bits (218), Expect = 7e-18
Identities = 78/295 (26%), Positives = 138/295 (46%), Gaps = 25/295 (8%)
Query: 1 MGRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGR-------KSRSKSRSWSR 53
M +++ E E KR ++ + S++ +S + +KGGR KSRS S+S SR
Sbjct: 266 MTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSHSR 325
Query: 54 DLQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPR 113
+ RS S R R H S S RR +S + R + + R RSRS SR +R +R +
Sbjct: 326 --RKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREK 383
Query: 114 LRSHSRSSERSSHR-RTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKA 172
++ R E+ + R R + R++E+ +G++K+ R+KE++K ++K+ + E
Sbjct: 384 IKEKERVKEKDREKEREREKEREKEKERGKNKD-RDKEREKDREKDKEKDREREREK--- 439
Query: 173 GLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEI 232
EH ++ K + Q E + K+R++E ++RK++ ++ +
Sbjct: 440 --EHEKDRDKEKEKEQ--------DKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRR 489
Query: 233 EAIESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKEIDPTS 287
S ++ RSS ++ + + K + S S P S EKE D S
Sbjct: 490 SRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPS-PRSRNKKDKKREKERDHIS 543
>gi|21040255 splicing factor, arginine/serine-rich 12 isoform b
[Homo sapiens]
Length = 508
Score = 95.1 bits (235), Expect = 8e-20
Identities = 87/324 (26%), Positives = 141/324 (43%), Gaps = 46/324 (14%)
Query: 2 GRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHS 61
GR S T +SRS K H RR S S SR+++R + +K R +S+S + RS S
Sbjct: 190 GRSRSHTRSKSRSS-SKSHSRRKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKK---RSKS 245
Query: 62 YDRRR-RHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTR-RSRSRPRLRSHSR 119
+RR+ R RS S R++ + + R + K +R R K R + + R + + R R
Sbjct: 246 RERRKSRSRSHSRDKRKDTREKIKEKERVKEKDREKEREREKEREKEKERGKNKDRDKER 305
Query: 120 SSERSSHR-RTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLP 178
+R + + R R R++E K RDKEK EKE+DK K++E K + K P
Sbjct: 306 EKDREKDKEKDREREREKEHEKDRDKEK-EKEQDKEKEREKDRSKEIDEKRKKDKKSRTP 364
Query: 179 P------------AEQAKARLQLVLEAAAKADEALKAKE--------RNEEEAKRRKEED 218
P + + + R + + + +K K RN+++ KR KE D
Sbjct: 365 PRSYNASRRSRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPSPRSRNKKDKKREKERD 424
Query: 219 QATLVEQVKRVKEIEAIESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPS 278
+ + +R + +D R KE K + +K+ P S+V+
Sbjct: 425 HISERRERERSTSMRKSSND-------RDGKE-KLEKNSTSLKEKEHNKEPDSSVS---- 472
Query: 279 TEKEIDPTSIPTAIKYQDDNSLAH 302
KE+D P ++N + H
Sbjct: 473 --KEVDDKDAPRT----EENKIQH 490
Score = 88.6 bits (218), Expect = 7e-18
Identities = 78/295 (26%), Positives = 138/295 (46%), Gaps = 25/295 (8%)
Query: 1 MGRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGR-------KSRSKSRSWSR 53
M +++ E E KR ++ + S++ +S + +KGGR KSRS S+S SR
Sbjct: 150 MTPQAAAKELEEVMKRVREAQSFISAAIEPESGKSNERKGGRSRSHTRSKSRSSSKSHSR 209
Query: 54 DLQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPR 113
+ RS S R R H S S RR +S + R + + R RSRS SR +R +R +
Sbjct: 210 --RKRSQSKHRSRSHNRSRSRQKDRRRSKSPHKKRSKSRERRKSRSRSHSRDKRKDTREK 267
Query: 114 LRSHSRSSERSSHR-RTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKA 172
++ R E+ + R R + R++E+ +G++K+ R+KE++K ++K+ + E
Sbjct: 268 IKEKERVKEKDREKEREREKEREKEKERGKNKD-RDKEREKDREKDKEKDREREREK--- 323
Query: 173 GLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEI 232
EH ++ K + Q E + K+R++E ++RK++ ++ +
Sbjct: 324 --EHEKDRDKEKEKEQ--------DKEKEREKDRSKEIDEKRKKDKKSRTPPRSYNASRR 373
Query: 233 EAIESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKEIDPTS 287
S ++ RSS ++ + + K + S S P S EKE D S
Sbjct: 374 SRSSSRERRRRRSRSSSRSPRTSKTIKRKSSRSPS-PRSRNKKDKKREKERDHIS 427
>gi|154146193 splicing factor, arginine/serine-rich 130 [Homo
sapiens]
Length = 805
Score = 95.1 bits (235), Expect = 8e-20
Identities = 87/286 (30%), Positives = 134/286 (46%), Gaps = 18/286 (6%)
Query: 7 DTEEESRSKRKKKHRRRSSSSS---SSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYD 63
+ ++E + K K+ R SSSS SS+SRT S S S S S RS S
Sbjct: 494 EPKKEHKEKEKQGRSRSGSSSSGSSSSNSRTSSTSSTVSSSSYSSSSGSSRTSSRSSSPK 553
Query: 64 RRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSER 123
R++RH S S + +RR RSRS SR R+R K R RR +R + R +
Sbjct: 554 RKKRHSRSRSPTIKARRSRSRSYSRRI--KIESNRARVKIRDRRRSNRNSIERERRRNRS 611
Query: 124 SSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGE-SGNIKAGLEHLPPAEQ 182
S R RSRSR R+RR R R +++ K D +RG SGN E+
Sbjct: 612 PSRERRRSRSRSRDRRTNRASRSRSRDRRKIDD------QRGNLSGNSHKHKGEAKEQER 665
Query: 183 AKARLQLVLEAAAKADEALKAKERNEEEAKRRKEED--QATLVEQVKRVKEIEAI--ESD 238
K R + + + K D+ + ++ +E ++R+E+D ++ +++KR +E E S
Sbjct: 666 KKERSRSIDKDRKKKDKEREREQDKRKEKQKREEKDFKFSSQDDRLKRKRESERTFSRSG 725
Query: 239 SFVQQTFR--SSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKE 282
S + R S ++ KKS K + S S S+ P S++++
Sbjct: 726 SISVKIIRHDSRQDSKKSTTKDSKKHSGSDSSGRSSSESPGSSKEK 771
Score = 83.2 bits (204), Expect = 3e-16
Identities = 70/224 (31%), Positives = 112/224 (50%), Gaps = 16/224 (7%)
Query: 5 SSDTEEESRS-KRKKKHRRRSS---SSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSH 60
SS T S S KRKK+H R S + S SR+YSR+ +R++ + R R+
Sbjct: 542 SSRTSSRSSSPKRKKRHSRSRSPTIKARRSRSRSYSRRIKIESNRARVKIRDRRRSNRNS 601
Query: 61 SYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRL----RS 116
RRR+RS S R+RSRSRSR R ++ R RSRS+ R + R L
Sbjct: 602 IERERRRNRSPS-----RERRRSRSRSRDR-RTNRASRSRSRDRRKIDDQRGNLSGNSHK 655
Query: 117 HSRSSERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEH 176
H ++ ++ RSRS D++R+K +DKE RE+E+DK K+K+ K + + L+
Sbjct: 656 HKGEAKEQERKKERSRSIDKDRKK-KDKE-REREQDKRKEKQKREEKDFKFSSQDDRLKR 713
Query: 177 LPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQA 220
+E+ +R + + D +K+ +++K+ D +
Sbjct: 714 KRESERTFSRSGSISVKIIRHDSRQDSKKSTTKDSKKHSGSDSS 757
Score = 48.1 bits (113), Expect = 1e-05
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 16/168 (9%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSY 62
RR D + + S KH+ + R+ S K RK + K R +D +
Sbjct: 639 RRKIDDQRGNLSGNSHKHKGEAKEQERKKERSRSIDKD-RKKKDKEREREQDKRKEKQKR 697
Query: 63 DRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRP-RLRSHSRSS 121
+ + SS +R+ R+ SR S ++ R S+ +++S ++ + S S SS
Sbjct: 698 EEKDFKFSSQDDRLKRKRESERTFSRSGSISVKIIRHDSRQDSKKSTTKDSKKHSGSDSS 757
Query: 122 ERSSH--------------RRTRSRSRDRERRKGRDKEKREKEKDKGK 155
RSS + +RSRS ++ +R G+ ++ K K + +
Sbjct: 758 GRSSSESPGSSKEKKAKKPKHSRSRSVEKSQRSGKKASRKHKSKSRSR 805
Score = 35.4 bits (80), Expect = 0.072
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 2 GRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRS 50
GR SS++ S+ K+ KK + S S R S KK RK +SKSRS
Sbjct: 758 GRSSSESPGSSKEKKAKKPKHSRSRSVEKSQR--SGKKASRKHKSKSRS 804
Score = 31.6 bits (70), Expect = 1.0
Identities = 24/96 (25%), Positives = 46/96 (47%), Gaps = 5/96 (5%)
Query: 192 EAAAKADEALKAKERNEEEAKRRKEEDQATL----VEQVKRVKEIEAIESDSFVQQTFRS 247
E++ DE L+ + R ++EA RKE++Q L +E+ K+ E E + F+ + S
Sbjct: 406 ESSDTDDEELRHRIRQKQEAFWRKEKEQQLLHDKQMEEEKQQTERVTKEMNEFIHKEQNS 465
Query: 248 SKEVK-KSVEPSEVKQATSTSGPASAVADPPSTEKE 282
++ + + V + T ++V +P KE
Sbjct: 466 LSLLEAREADGDVVNEKKRTPNETTSVLEPKKEHKE 501
>gi|21361282 splicing factor, arginine/serine-rich 4 [Homo sapiens]
Length = 494
Score = 92.8 bits (229), Expect = 4e-19
Identities = 82/304 (26%), Positives = 135/304 (44%), Gaps = 38/304 (12%)
Query: 3 RRSSDTEEESRSKRKKKH----RRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPR 58
R S + SRS+ + +H R RS SS SS S++ SR + G +SRSKSRS S+
Sbjct: 183 RSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSKSRSRSRSGSRSRSKSRSRSQSRSRS 242
Query: 59 SHSYDRRRRHRSSSSSSYGSRRKRSRSRSR-----------GRGKSYRVQRSRSKSRTR- 106
R S S S+ + + RS+S+ + G+ KS R +SKS++R
Sbjct: 243 KKEKSRSPSKEKSRSRSHSAGKSRSKSKDQAEEKIQNNDNVGKPKSRSPSRHKSKSKSRS 302
Query: 107 ----------------RSRSRPRLRSHSRSSERS---SHRRTRSRSRDRERRKGRDKEKR 147
R RS+ + SRS RS S R+RSRS+ +++RKGR + +
Sbjct: 303 RSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSRSKGGSRSRSRSRSKSKDKRKGRKRSRE 362
Query: 148 E-KEKDKGKDKELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKER 206
E + + + + K + KRG + KAG E R Q + + + E AK
Sbjct: 363 ESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTD-RSQSRSPSRSVSKEREHAKSE 421
Query: 207 NEEEAKRRKEEDQATLVEQVKRVKEIEAIESDSFVQQTFRSSKEVKKSVEPSEVKQATST 266
+ + R + E+ T E R + + + ++ SK K+ S+ + +++
Sbjct: 422 SSQREGRGESENAGTNQETRSRSRS-NSKSKPNLPSESRSRSKSASKTRSRSKSRSRSAS 480
Query: 267 SGPA 270
P+
Sbjct: 481 RSPS 484
Score = 77.4 bits (189), Expect = 2e-14
Identities = 69/259 (26%), Positives = 123/259 (47%), Gaps = 19/259 (7%)
Query: 33 RTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGK 92
R K G R+ RS SRS S + R+ R RS SS S S+ RSRSRS R +
Sbjct: 171 RLVEDKPGSRRRRSYSRSRSHSRSRSRSRHSRKSRSRSGSSKSSHSK-SRSRSRSGSRSR 229
Query: 93 SYRVQRSRSKSRTRRSRSRPRLRSHSRSSERSSHRRTRSRSRDRERRK-------GRDKE 145
S RS+S+SR+++ +SR + SRS S+ ++RS+S+D+ K G+ K
Sbjct: 230 SKSRSRSQSRSRSKKEKSRSPSKEKSRSRSHSA-GKSRSKSKDQAEEKIQNNDNVGKPKS 288
Query: 146 K---REKEKDKGKDK-ELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEAL 201
+ R K K K + + + ++ + G++ G Q+++R + + +++
Sbjct: 289 RSPSRHKSKSKSRSRSQERRVEEEKRGSVSRGRSQEKSLRQSRSRSR--SKGGSRSRSRS 346
Query: 202 KAKERNEEEAKRRKEEDQATLVEQVKRVKEIEAIESDSFVQQTFRSSKEVKKSVEPSEVK 261
++K +++ + ++R E+ + R K + + S SSK+ KK E ++
Sbjct: 347 RSKSKDKRKGRKRSREESRS--RSRSRSKSERSRKRGSKRDSKAGSSKKKKK--EDTDRS 402
Query: 262 QATSTSGPASAVADPPSTE 280
Q+ S S S + +E
Sbjct: 403 QSRSPSRSVSKEREHAKSE 421
Score = 73.2 bits (178), Expect = 3e-13
Identities = 56/141 (39%), Positives = 75/141 (53%), Gaps = 11/141 (7%)
Query: 2 GRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRK------SRSKSRSWSRDL 55
GR+ S E SRS+ + K R S DS+ S KK ++ SRS SRS S++
Sbjct: 356 GRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKER 415
Query: 56 Q-PRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTR-RSRSRPR 113
+ +S S R R S ++ + R RSRS S+ + RSRSKS ++ RSRS+ R
Sbjct: 416 EHAKSESSQREGRGESENAGTNQETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSKSR 475
Query: 114 LRSHSRSSERSSHRRTRSRSR 134
RS SRS RS R+RS SR
Sbjct: 476 SRSASRSPSRS---RSRSHSR 493
Score = 70.9 bits (172), Expect = 2e-12
Identities = 54/150 (36%), Positives = 77/150 (51%), Gaps = 7/150 (4%)
Query: 2 GRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHS 61
G S + S+SK K+K R+RS S S SR+ S+ + RK SK S + + +
Sbjct: 338 GGSRSRSRSRSKSKDKRKGRKRSREESRSRSRSRSKSERSRKRGSKRDSKAGSSKKKKKE 397
Query: 62 YDRRRRHRSSSSSSYGSRR--KRSRSRSRGRGKSYRV---QRSRSKSRTRRSRSRPRLRS 116
R + RS S S R K S+ GRG+S Q +RS+SR+ S+S+P L S
Sbjct: 398 DTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAGTNQETRSRSRS-NSKSKPNLPS 456
Query: 117 HSRSSERSSHRRTRSRSRDRERRKGRDKEK 146
SRS +S+ +TRSRS+ R R R +
Sbjct: 457 ESRSRSKSA-SKTRSRSKSRSRSASRSPSR 485
Score = 55.1 bits (131), Expect = 9e-08
Identities = 43/125 (34%), Positives = 61/125 (48%), Gaps = 16/125 (12%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSY 62
+R S + ++ S +KKK S S S SR+ S+++ KS S R + + +
Sbjct: 379 KRGSKRDSKAGSSKKKKKEDTDRSQSRSPSRSVSKEREHAKSESSQREGRGESENAGTNQ 438
Query: 63 DRRRRHRSSSSS-------SYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLR 115
+ R R RS+S S S + S++RSR + RSRS S RS SR R R
Sbjct: 439 ETRSRSRSNSKSKPNLPSESRSRSKSASKTRSRSK------SRSRSAS---RSPSRSRSR 489
Query: 116 SHSRS 120
SHSRS
Sbjct: 490 SHSRS 494
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 92.4 bits (228), Expect = 5e-19
Identities = 82/262 (31%), Positives = 121/262 (46%), Gaps = 30/262 (11%)
Query: 1 MGRRSSDTEEESRSKRKKKHRRRSSSSSSS------DSRTYSRKKGGRKSRSKSRSWSRD 54
MGR S + S S+ + R RS S S D R+ SR + R+ RS+SR
Sbjct: 1 MGRESRHYRKRSASRGRSGSRSRSRSPSDKRSKRGDDRRSRSRDRDRRRERSRSRD---- 56
Query: 55 LQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSR-SRPR 113
+ RS S DR+R RS S R+R RSR R R +S +RSRS+SR RRSR S P
Sbjct: 57 -KRRSRSRDRKRLRRSRS-------RERDRSRERRRSRSRDRRRSRSRSRGRRSRSSSPG 108
Query: 114 LRSHSRSSERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGK--DKELHNIKRGESGNIK 171
+S + S +T +E++K +D ++ EKEKD G +L R ++
Sbjct: 109 NKSKKTENRSRSKEKTDGGESSKEKKKDKDDKEDEKEKDAGNFDQNKLEEEMRKRKERVE 168
Query: 172 AGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKE 231
E EQ K ++ + E + +E + K+ + E+ ++D+ E K E
Sbjct: 169 KWRE-----EQRKKAMENIGELKKEIEEMKQGKKWSLED----DDDDEDDPAEAEKEGNE 219
Query: 232 IEAIESDSFVQQTFRSSKEVKK 253
+E E D +EVKK
Sbjct: 220 MEGEELDPLDAYMEEVKEEVKK 241
>gi|38146113 arginine/serine-rich coiled-coil 2 isoform b [Homo
sapiens]
Length = 375
Score = 92.4 bits (228), Expect = 5e-19
Identities = 75/235 (31%), Positives = 110/235 (46%), Gaps = 23/235 (9%)
Query: 2 GRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHS 61
GRR ++ S+ + ++H + SS R S + G + + K R SR + S S
Sbjct: 11 GRRHESKDKSSKKHKSEEHNDKEHSSDKGRERLNSSENGEDRHKRKERKSSRG-RSHSRS 69
Query: 62 YDRRRRHRSSSSSSYGSR-RKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRS 120
R RRHRS S SR R R R +SR R + + RSRS+ R RR RSR R RS R
Sbjct: 70 RSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHRH 129
Query: 121 SERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPA 180
RS R+R+RSR R+R+K +K +R ++ R S G A
Sbjct: 130 RTRS---RSRTRSRSRDRKKRIEKPRRFS----------RSLSRTPSPPPFRGRNTAMDA 176
Query: 181 EQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIEAI 235
++A AR LE A K E +R +E +++K+++ A V + A+
Sbjct: 177 QEALARR---LERAKKLQE-----QREKEMVEKQKQQEIAAAAATGGSVLNVAAL 223
Score = 50.4 bits (119), Expect = 2e-06
Identities = 48/235 (20%), Positives = 92/235 (39%), Gaps = 27/235 (11%)
Query: 64 RRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSER 123
RR + SS + S + S +G R + + S++ R + + R S RS R
Sbjct: 12 RRHESKDKSSKKHKSEEHNDKEHSSDKG---RERLNSSENGEDRHKRKERKSSRGRSHSR 68
Query: 124 SSHRRTRSRSRDRERRKGRDKEK---------REKEKDKGKDKELHNIKRGESGNIKAGL 174
S R R RSR RER+K R + + RE++K + + +E R S +
Sbjct: 69 SRSRERRHRSRSRERKKSRSRSRERKKSRSRSRERKKSRSRSRERKRRIRSRSRSRSRHR 128
Query: 175 EHLPPAEQAKARLQLVLEAAAKADEALKAKERNEE----EAKRRKEEDQATLVEQVKRVK 230
+ ++R + + K ++ R + + Q L +++R K
Sbjct: 129 HRTRSRSRTRSRSRDRKKRIEKPRRFSRSLSRTPSPPPFRGRNTAMDAQEALARRLERAK 188
Query: 231 EIEAIESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKEIDP 285
+++ + KE+ + + E+ A +T G VA ++ ++ P
Sbjct: 189 KLQE-----------QREKEMVEKQKQQEIAAAAATGGSVLNVAALLASGTQVTP 232
>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
Length = 330
Score = 89.0 bits (219), Expect = 5e-18
Identities = 63/170 (37%), Positives = 81/170 (47%), Gaps = 25/170 (14%)
Query: 1 MGRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSH 60
+ + + D EE S +KK +RR S S SS SR+ SR SRS+SRS SR
Sbjct: 180 LSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSR------- 232
Query: 61 SYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRS 120
SSSSS R SR RSR RG +SRS SR+ R S PR RS+S S
Sbjct: 233 ----------SSSSSQSRSRSSSRERSRSRG-----SKSRSSSRSHRGSSSPRKRSYSSS 277
Query: 121 SERSSHRRTRSRSRDR---ERRKGRDKEKREKEKDKGKDKELHNIKRGES 167
S R RSRSR +R+K R + + + + + H+ R S
Sbjct: 278 SSSPERNRKRSRSRSSSSGDRKKRRTRSRSPERRHRSSSGSSHSGSRSSS 327
Score = 73.9 bits (180), Expect = 2e-13
Identities = 57/139 (41%), Positives = 72/139 (51%), Gaps = 16/139 (11%)
Query: 8 TEEESRSKRKKKHRR---RSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDR 64
+ SRSK + H R RSSS SSS SR+ SR + S+S+SRS SR+ S R
Sbjct: 198 SNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRE-----RSRSR 252
Query: 65 RRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSER- 123
+ RSSS S GS R RS S R R RS+SR+ S R + R+ SRS ER
Sbjct: 253 GSKSRSSSRSHRGSSSPRKRSYSSSSSSPER-NRKRSRSRSSSSGDRKKRRTRSRSPERR 311
Query: 124 ------SSHRRTRSRSRDR 136
SSH +RS S+ +
Sbjct: 312 HRSSSGSSHSGSRSSSKKK 330
Score = 56.2 bits (134), Expect = 4e-08
Identities = 49/181 (27%), Positives = 74/181 (40%), Gaps = 11/181 (6%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRK-------SRSKSRSWSRDL 55
R SD E + ++KKK+R ++ +S ++ G + S+ K +
Sbjct: 117 REESDGEYDEFGRKKKKYRGKAVGPASILKEVEDKESEGEEEDEDEDLSKYKLDEDEDED 176
Query: 56 QPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRS---RGRGKSYRVQRSRSKSRTRRSRSRP 112
Y+ S+ +RR RS+SRS R +S SRS+SR+R SRS
Sbjct: 177 DADLSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSR-SRSSS 235
Query: 113 RLRSHSRSSERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKA 172
+S SRSS R R S+SR R R++ N KR S + +
Sbjct: 236 SSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSS 295
Query: 173 G 173
G
Sbjct: 296 G 296
>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
Length = 320
Score = 87.4 bits (215), Expect = 2e-17
Identities = 62/151 (41%), Positives = 76/151 (50%), Gaps = 24/151 (15%)
Query: 1 MGRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSH 60
+ + + D EE S +KK +RR S S SS SR+ SR SRS+SRS SR
Sbjct: 180 LSKYNLDASEEEDSNKKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSR------- 232
Query: 61 SYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRS 120
SSSSS R SR RSR RG +SRS SR+ R S PR RS+S S
Sbjct: 233 ----------SSSSSQSRSRSSSRERSRSRG-----SKSRSSSRSHRGSSSPRKRSYSSS 277
Query: 121 SERSSHRRTRSRSRDRERRKGRDKEKREKEK 151
S SS R R RSR R G K++R + +
Sbjct: 278 S--SSPERNRKRSRSRSSSSGDRKKRRTRSR 306
Score = 62.8 bits (151), Expect = 4e-10
Identities = 42/106 (39%), Positives = 52/106 (49%), Gaps = 1/106 (0%)
Query: 4 RSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYD 63
RSS + SRS R RS S S S S + SR + + RS+SR RSH
Sbjct: 207 RSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGS 266
Query: 64 RRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSR 109
R RS SSSS R R RSRSR R +R R++SR+ S+
Sbjct: 267 SSPRKRSYSSSSSSPERNRKRSRSRSSSSGDRKKR-RTRSRSPESQ 311
Score = 60.5 bits (145), Expect = 2e-09
Identities = 44/110 (40%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKG---GRKSRSKSRSWSRDLQPRS 59
R SS + S S+ + + R RSSSSS S SR+ SR++ G KSRS SRS PR
Sbjct: 212 RSSSRSSSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKSRSSSRSHRGSSSPRK 271
Query: 60 HSY-------DRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSK 102
SY +R R+ S SSS G R+KR R+R R +V +K
Sbjct: 272 RSYSSSSSSPERNRKRSRSRSSSSGDRKKR---RTRSRSPESQVIGENTK 318
>gi|224548936 hypothetical protein LOC100170229 [Homo sapiens]
Length = 715
Score = 87.0 bits (214), Expect = 2e-17
Identities = 67/191 (35%), Positives = 96/191 (50%), Gaps = 11/191 (5%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSY 62
R + + SRS+ K R RS S S + +R +SR + K+R +SRS S + R HS
Sbjct: 429 RSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKE-RDHSQ 487
Query: 63 ----DRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRP---RLR 115
+ R HR S S S + ++SRS S+ R +R RS SK R RR P R R
Sbjct: 488 LGSPSKERDHRRSRSPSKERQCRQSRSSSKER--DHRRSRSPSKERQRRQSRSPNKERDR 545
Query: 116 SHSRS-SERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGL 174
S SRS SE HR++RS S++R+RR+ R K + + E + R S N ++G
Sbjct: 546 SQSRSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGY 605
Query: 175 EHLPPAEQAKA 185
+ + KA
Sbjct: 606 SRPRASSKEKA 616
Score = 84.0 bits (206), Expect = 2e-16
Identities = 79/282 (28%), Positives = 121/282 (42%), Gaps = 16/282 (5%)
Query: 4 RSSDTEEESR-SKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWS-RDLQPRSHS 61
RSS E + R S +K RS S S + R +SR + K+R +SRS S + RS S
Sbjct: 369 RSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRS 428
Query: 62 YDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTR-RSRSRPRLRSHSR- 119
+ S S S R RSRSRS + + + RS +K+R R RSRS + R HS+
Sbjct: 429 RSPNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQL 488
Query: 120 --SSERSSHRRTRSRSRDRERRKGRDKEK-REKEKDKGKDKELHNIK---------RGES 167
S+ HRR+RS S++R+ R+ R K R+ + + KE + R +S
Sbjct: 489 GSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQS 548
Query: 168 GNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVK 227
+ EH +K R + + +K E +++ +EE R
Sbjct: 549 RSPSEEREHRQSRSPSKERDRRRWRSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRP 608
Query: 228 RVKEIEAIESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGP 269
R E S S + + + S + S+ Q+T P
Sbjct: 609 RASSKEKAHSRSRTPSKEGNHSQSRTSSKESDPSQSTVPRSP 650
Score = 70.1 bits (170), Expect = 3e-12
Identities = 74/287 (25%), Positives = 122/287 (42%), Gaps = 30/287 (10%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKS------RSKSRSWSRD-L 55
R S + + + S+ + + R+ S S++ S KG ++ R +S +WSR+
Sbjct: 301 RVRSHSWKRNHSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPS 360
Query: 56 QPRSHSYDR----RRRHRSSSSSSYGSRRKRS----RSRSRGRGKSYRVQRSRSKSRT-- 105
+ RSHS+ R R HR SSS S R +S + R R +S R RS+SR+
Sbjct: 361 KERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPY 420
Query: 106 -RRSRSRPRLRSHSRSSERS-SHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIK 163
R RSR R + +R RS S + R RSR R K RD R + +K +D
Sbjct: 421 KARDRSRSRSPNKARDCSRSRSPYKARDRSRSRSPNKARD-HSRSRSPNKARD------- 472
Query: 164 RGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLV 223
R S + +H +K R + +K + +++ ++E RR
Sbjct: 473 RSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSK--- 529
Query: 224 EQVKRVKEIEAIESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGPA 270
E+ +R E D ++ +E ++S PS+ + P+
Sbjct: 530 ERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRWRSPS 576
Score = 68.2 bits (165), Expect = 1e-11
Identities = 83/306 (27%), Positives = 132/306 (43%), Gaps = 36/306 (11%)
Query: 6 SDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRR 65
S TE SR K + RS S S SR+ R + G + R+ SR RSHS+ R
Sbjct: 258 SPTEMSSRVKSYNQASTRSRPQSHSQSRSPRRSRSGSQKRTHSRV-------RSHSWKRN 310
Query: 66 R-RHRSSSSSSYGSRRKR-SRSRSRGRGKSYRVQRSRSKSRTR---RSRSRPRLRSHSRS 120
R RS + S+ R S+SRS +GKS R+ + R+ R+ S+ R SHSRS
Sbjct: 311 HSRARSRTRKGILSQMGRHSQSRSHSKGKSQNQSRTPRRGRSHNWSRNPSKERSHSHSRS 370
Query: 121 SER-------SSHRRTRSRSRDRERRKGRDKEKR---EKEKDKGKDKELHNIK-RGESGN 169
S + SS R+ RS+ K RD + K +D+ + + + + R S +
Sbjct: 371 SSKERDHRGSSSPRKESGRSQSGSPNKQRDHSRSRSPNKARDRSRSRSPYKARDRSRSRS 430
Query: 170 IKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRR-----KEEDQATLVE 224
+ KAR + + KA + +++ N+ + R KE D + L
Sbjct: 431 PNKARDCSRSRSPYKARDRSRSRSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGS 490
Query: 225 QVKR--VKEIEAIESDSFVQQTFRSSKE--VKKSVEPSEVKQATSTSGPAS----AVADP 276
K + + + +Q+ SSKE ++S PS+ +Q + P + +
Sbjct: 491 PSKERDHRRSRSPSKERQCRQSRSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRS 550
Query: 277 PSTEKE 282
PS E+E
Sbjct: 551 PSEERE 556
Score = 62.0 bits (149), Expect = 7e-10
Identities = 58/185 (31%), Positives = 81/185 (43%), Gaps = 41/185 (22%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRS--KSRSWSRDLQPR-S 59
R + + SRS+ K R RS S S S R +S+ K R +SRS S++ Q R S
Sbjct: 453 RSPNKARDHSRSRSPNKARDRSRSRSPSKERDHSQLGSPSKERDHRRSRSPSKERQCRQS 512
Query: 60 HSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKS----------YRVQRSRSKSRTRR-- 107
S + R HR S S S +R++SRS ++ R +S +R RS SK R RR
Sbjct: 513 RSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRW 572
Query: 108 -----------SRSRPRLRSHSRS---------------SERSSHRRTRSRSRDRERRKG 141
SRS R HSRS S+ +H R+R+ S++ +
Sbjct: 573 RSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQS 632
Query: 142 RDKEK 146
R K
Sbjct: 633 RTSSK 637
Score = 53.9 bits (128), Expect = 2e-07
Identities = 48/158 (30%), Positives = 72/158 (45%), Gaps = 21/158 (13%)
Query: 4 RSSDTEEE---SRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPR-- 58
RSS E + SRS K++ RR+S S + R+ SR + +SRS S++ R
Sbjct: 513 RSSSKERDHRRSRSPSKERQRRQSRSPNKERDRSQSRSPSEEREHRQSRSPSKERDRRRW 572
Query: 59 -SHSYDRRRRHRSSSS--------------SSYGSRRKRSRSRSRGRGKSYRVQRSRSKS 103
S S +R RR SSS S Y R S+ ++ R ++ + + S+S
Sbjct: 573 RSPSKERERRQSRSSSEERDHSRSRSPNKQSGYSRPRASSKEKAHSRSRTPSKEGNHSQS 632
Query: 104 RTRRSRSRPRLRSHSRSSE-RSSHRRTRSRSRDRERRK 140
RT S P + RS + + S RT S S++R K
Sbjct: 633 RTSSKESDPSQSTVPRSPDWKRSPTRTSSLSQNRTPSK 670
Score = 53.1 bits (126), Expect = 3e-07
Identities = 54/215 (25%), Positives = 98/215 (45%), Gaps = 24/215 (11%)
Query: 21 RRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWS-RDLQPRSHSYDRR--RRHRSSSSSSYG 77
+ +S + S S SR + G S+ +S+S ++ R SY++ R S S S
Sbjct: 228 KEKSDNPSPSSSRKV-KSYGQMIIPSREKSYSPTEMSSRVKSYNQASTRSRPQSHSQSRS 286
Query: 78 SRRKRS----RSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSERSSHRRTRSRS 133
RR RS R+ SR R S++ SR++SRTR+ L R S+ SH + +S++
Sbjct: 287 PRRSRSGSQKRTHSRVRSHSWKRNHSRARSRTRKG----ILSQMGRHSQSRSHSKGKSQN 342
Query: 134 RDRERRKGR--------DKEK---REKEKDKGKDKELHNIKRGESGNIKAGLEHLPPAEQ 182
+ R R+GR KE+ + K +D + R ESG ++G + +
Sbjct: 343 QSRTPRRGRSHNWSRNPSKERSHSHSRSSSKERDHRGSSSPRKESGRSQSGSPN-KQRDH 401
Query: 183 AKARLQLVLEAAAKADEALKAKERNEEEAKRRKEE 217
+++R +++ KA++R+ + + +
Sbjct: 402 SRSRSPNKARDRSRSRSPYKARDRSRSRSPNKARD 436
Score = 43.5 bits (101), Expect = 3e-04
Identities = 38/132 (28%), Positives = 58/132 (43%), Gaps = 7/132 (5%)
Query: 24 SSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRRHRSSSSSSYGSRRKRS 83
S SSS S T +++ + S+SR S+ P S D R S +S +R+ +
Sbjct: 58 SPSSSKSTKSTSTKRAPSNRPSSRSRVRSKARTPSRVSTDTRTSKASKASDVRCHQRRGT 117
Query: 84 RSRSRGRGKSYRVQRSRSKSRTRRSRSRP-RLRSHSRSSERSSHRRTRSRSRDRERRK-- 140
SR R G+ + SRS R+ S P R+R+H +S RT + + R K
Sbjct: 118 HSRGRTPGR----RGSRSSKRSPSRASTPGRIRTHGARPGMASRVRTPTSQQKGSRGKSY 173
Query: 141 GRDKEKREKEKD 152
GR + + D
Sbjct: 174 GRPRTSNRERSD 185
Score = 40.0 bits (92), Expect = 0.003
Identities = 44/139 (31%), Positives = 62/139 (44%), Gaps = 6/139 (4%)
Query: 1 MGRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSR-KKGGRKSRSKSRSWSRDLQPR- 58
M SS + + + +KR +R S S S +RT SR R S++ S R Q R
Sbjct: 57 MSPSSSKSTKSTSTKRAPSNRPSSRSRVRSKARTPSRVSTDTRTSKASKASDVRCHQRRG 116
Query: 59 SHSYDR---RRRHRSSS-SSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRL 114
+HS R RR RSS S S S R R+ G + RV+ S+ + R +S R
Sbjct: 117 THSRGRTPGRRGSRSSKRSPSRASTPGRIRTHGARPGMASRVRTPTSQQKGSRGKSYGRP 176
Query: 115 RSHSRSSERSSHRRTRSRS 133
R+ +R S R +S
Sbjct: 177 RTSNRERSDSQPRNLSKKS 195
>gi|4759100 splicing factor, arginine/serine-rich 11 [Homo sapiens]
Length = 484
Score = 86.7 bits (213), Expect = 3e-17
Identities = 60/168 (35%), Positives = 91/168 (54%), Gaps = 14/168 (8%)
Query: 4 RSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYD 63
+ + SRS+ + + RR SSS SR+ SR++ KSRS+ RS S + RSHS +
Sbjct: 241 KKEEKRRHSRSRSRSRRRRTPSSSRHRRSRSRSRRRSHSKSRSRRRSKS-PRRRRSHSRE 299
Query: 64 RRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRV-QRSRSKSRTRRSR---------SRPR 113
R RR RS+S + + + + RS+ KSY +RSRS SR RR R +PR
Sbjct: 300 RGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPR 359
Query: 114 L--RSHSRSSERSSHRRTRSRSRDRER-RKGRDKEKREKEKDKGKDKE 158
R SRS H++ + + +D+ER R R++ +K+K K K+K+
Sbjct: 360 SPKRKLSRSPSPRRHKKEKKKDKDKERSRDERERSTSKKKKSKDKEKD 407
Score = 81.3 bits (199), Expect = 1e-15
Identities = 78/266 (29%), Positives = 118/266 (44%), Gaps = 44/266 (16%)
Query: 5 SSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDR 64
+S E E KR ++ + S++ D + R R SRS+SRS R R+ S R
Sbjct: 214 TSSKEIEEAMKRVREAQSLISAAIEPDKKEEKR----RHSRSRSRSRRR----RTPSSSR 265
Query: 65 RRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSER- 123
RR RS S RR S+SRSR R KS R +RS S+ R RRSRS + R + +
Sbjct: 266 HRRSRSRSR-----RRSHSKSRSRRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKEK 320
Query: 124 ----------SSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAG 173
S+ RR+RS SR+R RR+ R + K+ K K
Sbjct: 321 KRSKTPPKSYSTARRSRSASRERRRRRSRSGTRSPKKPRSPKRK---------------- 364
Query: 174 LEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIE 233
L P + K + + DE + + ++++ + KE+D+ E K VK++
Sbjct: 365 LSRSPSPRRHKKEKKKDKDKERSRDE--RERSTSKKKKSKDKEKDRERKSESDKDVKQVT 422
Query: 234 AIESDSFVQQTFRSSKEVKKSVEPSE 259
+ +Q + S KE K+ +P E
Sbjct: 423 RDYDEE--EQGYDSEKEKKEEKKPIE 446
Score = 68.6 bits (166), Expect = 8e-12
Identities = 51/176 (28%), Positives = 82/176 (46%), Gaps = 16/176 (9%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSY 62
RR S + RS +++ RR S+S + D + ++K K+ KS S +R RS S
Sbjct: 284 RRRSKSPRRRRSHSRERGRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTAR----RSRSA 339
Query: 63 DRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSE 122
R RR R S S + ++ RS R R S R + K + RSR R
Sbjct: 340 SRERRRRRSRSGTRSPKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSR-----DERERS 394
Query: 123 RSSHRRTRSRSRDRERRKGRDKEKRE-----KEKDKGKDKELHNIKRGESGNIKAG 173
S ++++ + +DRER+ DK+ ++ E+++G D E K+ E I+ G
Sbjct: 395 TSKKKKSKDKEKDRERKSESDKDVKQVTRDYDEEEQGYDSEKE--KKEEKKPIETG 448
Score = 65.5 bits (158), Expect = 6e-11
Identities = 46/157 (29%), Positives = 79/157 (50%), Gaps = 19/157 (12%)
Query: 2 GRRSSDTEEESRSKRKKKHRRRS-----SSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQ 56
GRRS T + K++ K ++RS S S++ SR+ SR++ R+SRS +RS
Sbjct: 301 GRRSRSTSKTRDKKKEDKEKKRSKTPPKSYSTARRSRSASRERRRRRSRSGTRS------ 354
Query: 57 PRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRS 116
P+ +R+ RS S + +K+ + + R R +R RS S+ ++S+ + + R
Sbjct: 355 PKKPRSPKRKLSRSPSPRRHKKEKKKDKDKERSRD-----ERERSTSKKKKSKDKEKDRE 409
Query: 117 HSRSSERSSHRRTRSRSRDRERRKGRDKEKREKEKDK 153
S++ + TR E +G D EK +KE+ K
Sbjct: 410 RKSESDKDVKQVTRDYD---EEEQGYDSEKEKKEEKK 443
Score = 28.9 bits (63), Expect = 6.7
Identities = 21/91 (23%), Positives = 33/91 (36%), Gaps = 10/91 (10%)
Query: 15 KRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSR---------SWSRDLQPRSHSYDRR 65
K KKK + + S + T +KK K + + R +RD YD
Sbjct: 376 KEKKKDKDKERSRDERERSTSKKKKSKDKEKDRERKSESDKDVKQVTRDYDEEEQGYDSE 435
Query: 66 RRHRSSSSS-SYGSRRKRSRSRSRGRGKSYR 95
+ + GS + + S +G G S R
Sbjct: 436 KEKKEEKKPIETGSPKTKECSVEKGTGDSLR 466
>gi|166235169 PRP38 pre-mRNA processing factor 38 (yeast) domain
containing B [Homo sapiens]
Length = 546
Score = 84.7 bits (208), Expect = 1e-16
Identities = 67/251 (26%), Positives = 109/251 (43%), Gaps = 33/251 (13%)
Query: 9 EEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRRH 68
+E R +R+ K R + S S R R++ + R +SRS SRD + DR R
Sbjct: 299 KERQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRDREREK 358
Query: 69 RSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSR----------------- 111
+ G RR R + RG + +RSR +S+ +RSR
Sbjct: 359 ENER----GRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHRD 414
Query: 112 -----PRLRSHSRSSERSSHRRTRSRSRDR-ERRKGRDKEKREKEKDKGKDKELHNIKRG 165
+ + HSRS R R+RSRSR+ +R + R KEK K K++ K+K + G
Sbjct: 415 DKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSG 474
Query: 166 ESGNIKA-----GLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQA 220
G + EH P E+++ R + E + K D + + ++ + +R + +Q
Sbjct: 475 SQGRTDSVEKSKKREHSPSKEKSRKRSR-SKERSHKRDHSDSKDQSDKHDRRRSQSIEQE 533
Query: 221 TLVEQVKRVKE 231
+ +Q K E
Sbjct: 534 SQEKQHKNKDE 544
Score = 79.7 bits (195), Expect = 3e-15
Identities = 72/264 (27%), Positives = 110/264 (41%), Gaps = 21/264 (7%)
Query: 18 KKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQP-RSHSYDRRRRHRSSSSSSY 76
K R+ + R R+SRS RS S P RS S R SSS
Sbjct: 234 KTRPRKIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDR 293
Query: 77 GSRRKRSRSRSRGRGKSYRVQRSRSKS-----RTRRSRSRPRLRSHSRSSERSSHRRTRS 131
R++ R R K +R RS+S RRSRSR R RS SRS +R RR R
Sbjct: 294 ELEREKERQRLEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRSRSRDRKGDRRDRD 353
Query: 132 RSRDRERRKGR------DKEK---REKEKDKGKDKELHNIKRGE-----SGNIKAGLEHL 177
R R++E +GR DKE+ REKE+++ +++ RGE K H
Sbjct: 354 REREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHR 413
Query: 178 PPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIEAIES 237
+K + + + +++ RN + R + +++++ + + K + S
Sbjct: 414 DDKRDSKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRS 473
Query: 238 DSFVQQTFRSSKEVKKSVEPSEVK 261
S +T K K+ PS+ K
Sbjct: 474 GS-QGRTDSVEKSKKREHSPSKEK 496
Score = 75.1 bits (183), Expect = 8e-14
Identities = 73/299 (24%), Positives = 129/299 (43%), Gaps = 22/299 (7%)
Query: 2 GRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRK--KGGRKSRSKSRSWSRDLQPRS 59
G+ ++ + +R+ + RRS S S R+ SR + G S S R R+ + +
Sbjct: 244 GKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELEREKERQR 303
Query: 60 ---HSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRS 116
+ +R + R S S G R+RSRSR R R +S RSR + RR R R R +
Sbjct: 304 LEREAKEREKERRRSRSIDRGLERRRSRSRERHRSRS----RSRDRKGDRRDRDREREKE 359
Query: 117 HSR--------SSERSSHR---RTRSRSRDRERR-KGRDKEKREKE-KDKGKDKELHNIK 163
+ R ER + R R RSR R +E+R +G +EK+ KE KD + ++
Sbjct: 360 NERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKKHKEDKDDRRHRDDKRDS 419
Query: 164 RGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLV 223
+ E + ++ ++++R + +++ K K ++E++ +R
Sbjct: 420 KKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRT 479
Query: 224 EQVKRVKEIEAIESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKE 282
+ V++ K+ E S ++ RS + K Q+ S + S EK+
Sbjct: 480 DSVEKSKKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEQESQEKQ 538
Score = 68.2 bits (165), Expect = 1e-11
Identities = 52/165 (31%), Positives = 84/165 (50%), Gaps = 15/165 (9%)
Query: 4 RSSDTEEESRSK---RKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSH 60
RS + +E RS+ +KKH+ D + S+K+ K S+SRS R + RS
Sbjct: 384 RSRERSKEQRSRGEVEEKKHKEDKDDRRHRDDKRDSKKE---KKHSRSRSRERKHRSRSR 440
Query: 61 SYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRR---SRSRPRLRSH 117
S + +R RS S + S+ +S R +S R+ S ++++ S S+ + R
Sbjct: 441 SRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKEKSRKR 500
Query: 118 SRSSERSSHRRTRSRSRDR----ERRKGRDKEKREKEKD-KGKDK 157
SRS ER SH+R S S+D+ +RR+ + E+ +EK K KD+
Sbjct: 501 SRSKER-SHKRDHSDSKDQSDKHDRRRSQSIEQESQEKQHKNKDE 544
Score = 67.0 bits (162), Expect = 2e-11
Identities = 56/221 (25%), Positives = 93/221 (42%), Gaps = 26/221 (11%)
Query: 4 RSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSR--DLQPRSHS 61
R D + R + K+ R R R R+K +SR +S+ +++ + H
Sbjct: 345 RKGDRRDRDREREKENERGRRRDRDYDKERGNEREKERERSRERSKEQRSRGEVEEKKHK 404
Query: 62 YDRR-RRHRSSSSSSYGSRR-KRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSR 119
D+ RRHR S ++ RSRSR R + RS+SR+R + R R RS +
Sbjct: 405 EDKDDRRHRDDKRDSKKEKKHSRSRSRER---------KHRSRSRSRNAGKRSRSRSKEK 455
Query: 120 SSERSSHRRTRSRSRDRERRKGR-DKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLP 178
SS+ + + +S R R +GR D ++ K+++ KE + KR S +H
Sbjct: 456 SSKHKNESKEKSNKRSRSGSQGRTDSVEKSKKREHSPSKE-KSRKRSRSKERSHKRDHSD 514
Query: 179 PAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQ 219
+Q+ K D E + K+ K +D+
Sbjct: 515 SKDQSD-----------KHDRRRSQSIEQESQEKQHKNKDE 544
Score = 51.6 bits (122), Expect = 1e-06
Identities = 60/249 (24%), Positives = 100/249 (40%), Gaps = 12/249 (4%)
Query: 37 RKKGGRKSRSKSRSWSRDLQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRV 96
+K ++ +++ R +D + + DR R S S +RS RSR R
Sbjct: 226 QKNIDQQIKTRPRKIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREG 285
Query: 97 QRSRSKSRT-RRSRSRPRLRSHSRSSERSSHRRTRSRSRDRERRKGRDKEK---REKEKD 152
S S R R + R RL ++ E+ RR+RS R ERR+ R +E+ R + +D
Sbjct: 286 HGSSSFDRELEREKERQRLEREAKEREKE-RRRSRSIDRGLERRRSRSRERHRSRSRSRD 344
Query: 153 KGKDKELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAK 212
+ D+ + +R + + E+ R + E + + + + R E E K
Sbjct: 345 RKGDRRDRDREREKENERGRRRDRDYDKERGNEREK---ERERSRERSKEQRSRGEVEEK 401
Query: 213 RRKEEDQATLVEQVKRVKEIEAIESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGPASA 272
+ KE+ KR + E S S R K +S + K++ S S S+
Sbjct: 402 KHKEDKDDRRHRDDKRDSKKEKKHSRS----RSRERKHRSRSRSRNAGKRSRSRSKEKSS 457
Query: 273 VADPPSTEK 281
S EK
Sbjct: 458 KHKNESKEK 466
>gi|42560244 peptidylprolyl isomerase G [Homo sapiens]
Length = 754
Score = 84.3 bits (207), Expect = 1e-16
Identities = 77/236 (32%), Positives = 109/236 (46%), Gaps = 27/236 (11%)
Query: 7 DTEEESRSKRKKKHRRRSSSSSS---SDSRTYSRKKGGRKSR-SKSRSWSRDLQPRSHSY 62
+ E++S SK K + R RS S S S + K K R ++SRS D+ HSY
Sbjct: 499 EKEKQSDSKGKDQERSRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHSY 558
Query: 63 DRRRRHRSSSSSSYGSRRKRSRSRSRGRGKS-----YRVQ----RSRSKSRTR------- 106
+ R R RS S SRR RSR+ R R +S YR Q R RS+SR R
Sbjct: 559 NSRTRERSRSRDR--SRRVRSRTHDRDRSRSKEYHRYREQEYRRRGRSRSRERRTPPGRS 616
Query: 107 RSRSRPRLRSHSRSSER-SSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRG 165
RS+ R R R SRSSER S R + + R++E + KE E EK HN
Sbjct: 617 RSKDRRRRRRDSRSSEREESQSRNKDKYRNQESKSSHRKENSESEKRMYSKSRDHN-SSN 675
Query: 166 ESGNIKAGLEHLPPAEQAKARLQLVLEAAA---KADEALKAKERNEEEAKRRKEED 218
S KA + P ++ ++ L+++ K DE +++ E + + +E D
Sbjct: 676 NSREKKADRDQSPFSKIKQSSQDNELKSSMLKNKEDEKIRSSVEKENQKSKGQEND 731
Score = 79.0 bits (193), Expect = 6e-15
Identities = 68/286 (23%), Positives = 136/286 (47%), Gaps = 18/286 (6%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSY 62
RR+S+ +++ ++K KK R +S S S S ++ S+++ + +R++ + + R H
Sbjct: 439 RRNSEKDDKYKNKVKK--RAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDH-- 494
Query: 63 DRRRRHRSSSSSSYGSRRKRSRSRSRGR---GKSYRVQRSRSKSRTRRSRSRPRLRSHSR 119
+ + S S G ++RSRS+ + + KS S+SK + RR++SR R ++
Sbjct: 495 -ENVKEKEKQSDSKGKDQERSRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITK 553
Query: 120 SSER-SSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGE---SGNIKAGLE 175
+S R RSRSRDR RR R ++D+ + KE H + E G ++
Sbjct: 554 GKHSYNSRTRERSRSRDRSRR----VRSRTHDRDRSRSKEYHRYREQEYRRRGRSRSRER 609
Query: 176 HLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIEAI 235
PP +++++ + +++ E +++ RN+++ R +E + E + K + +
Sbjct: 610 RTPPG-RSRSKDRRRRRRDSRSSEREESQSRNKDK-YRNQESKSSHRKENSESEKRMYSK 667
Query: 236 ESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEK 281
D R K + S++KQ++ + S++ EK
Sbjct: 668 SRDHNSSNNSREKKADRDQSPFSKIKQSSQDNELKSSMLKNKEDEK 713
Score = 78.2 bits (191), Expect = 1e-14
Identities = 80/292 (27%), Positives = 130/292 (44%), Gaps = 34/292 (11%)
Query: 4 RSSDTEEESRSKRKKKHRRRSSSSSSS-----DSRTYSRKKGGRKSRSKSRSWSRDLQPR 58
+S E +S+ R ++ R RS S + S KG + RS+S+ S+ L+ +
Sbjct: 467 KSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEKQSDSKGKDQERSRSKEKSKQLESK 526
Query: 59 SHSYD--------RRRRHRS------SSSSSYGSR-RKRSRSRSRG---RGKSYRVQRSR 100
S+ +D RR + RS SY SR R+RSRSR R R +++ RSR
Sbjct: 527 SNEHDHSKSKEKDRRAQSRSRECDITKGKHSYNSRTRERSRSRDRSRRVRSRTHDRDRSR 586
Query: 101 SKSRTRRSRSRPRLRSHSRSSERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELH 160
SK R R R SRS ER + RSRS+DR RR+ RD E+E+ + ++K+ +
Sbjct: 587 SKEYHRYREQEYRRRGRSRSRERRT-PPGRSRSKDRRRRR-RDSRSSEREESQSRNKDKY 644
Query: 161 NIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQA 220
+ +S + K +E K + + + K +R++ + K+ Q
Sbjct: 645 RNQESKSSHRKEN------SESEKRMYSKSRDHNSSNNSREKKADRDQSPFSKIKQSSQD 698
Query: 221 T-LVEQVKRVKEIEAIESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGPAS 271
L + + KE E I S V++ + SK + + K+ S P +
Sbjct: 699 NELKSSMLKNKEDEKIRSS--VEKENQKSKGQENDHVHEKNKKFDHESSPGT 748
Score = 63.2 bits (152), Expect = 3e-10
Identities = 93/352 (26%), Positives = 140/352 (39%), Gaps = 89/352 (25%)
Query: 5 SSDTEE---ESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRS-- 59
SSD+E E KRKKKHR+ S + RKK + + S+S + + + QP+S
Sbjct: 216 SSDSESATEEKSKKRKKKHRKNSRKHKKEKKK---RKKSKKSASSESEAENLEAQPQSTV 272
Query: 60 ----------------------HSYDRRRRHR---------SSSSSSYGSRR--KRSRSR 86
+R+ R R +S +SY R RS +
Sbjct: 273 RPEEIPPIPENRFLMRKSPPKADEKERKNRERERERECNPPNSQPASYQRRLLVTRSGRK 332
Query: 87 SRGRG-KSYRV-QRSRSKSRTRRSRSRPRLRSHSRSSER---SSHRR------------- 128
+GRG + YR RSRS+ R RRS + P R + ++R SS R
Sbjct: 333 IKGRGPRRYRTPSRSRSRDRFRRSETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEIK 392
Query: 129 --TRSRSRDRERR----------KGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEH 176
RS R +ER+ R EK +K KD + + +I+R + K
Sbjct: 393 ENQRSPVRVKERKITDHRNVSESPNRKNEKEKKVKDHKSNSKERDIRRNSEKDDK----- 447
Query: 177 LPPAEQAKARLQLVLEAAAKADEALKAKER----NEEEAKRRKEEDQATLVEQVKRVKEI 232
+ K + + ++ +K+ E K+KER N E KR + + E VK ++
Sbjct: 448 ----YKNKVKKRAKSKSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEK- 502
Query: 233 EAIESDSFVQQTFRS-SKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKEI 283
+SDS + RS SKE K +E + S S A S E +I
Sbjct: 503 ---QSDSKGKDQERSRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDI 551
Score = 62.0 bits (149), Expect = 7e-10
Identities = 47/216 (21%), Positives = 91/216 (42%), Gaps = 19/216 (8%)
Query: 6 SDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRR 65
++ +E RS + K R+ + + S+S +K + KS S RD++ S D+
Sbjct: 389 NEIKENQRSPVRVKERKITDHRNVSESPNRKNEKEKKVKDHKSNSKERDIRRNSEKDDKY 448
Query: 66 RRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSERS- 124
+ + S +SRS+S+ + KS +++ +R RSR + R H E+
Sbjct: 449 KNKVKKRAKS------KSRSKSKEKSKSKERDSKHNRNEEKRMRSRSKGRDHENVKEKEK 502
Query: 125 ---SHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPAE 181
S + + RSR +E+ K + + E + K K+K+ R +I G
Sbjct: 503 QSDSKGKDQERSRSKEKSKQLESKSNEHDHSKSKEKDRRAQSRSRECDITKGKHSYNSRT 562
Query: 182 QAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEE 217
+ ++R D + + + R + + R +E
Sbjct: 563 RERSR---------SRDRSRRVRSRTHDRDRSRSKE 589
Score = 53.9 bits (128), Expect = 2e-07
Identities = 65/284 (22%), Positives = 109/284 (38%), Gaps = 30/284 (10%)
Query: 11 ESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRRHRS 70
+S+ K+++K R +SSSSSSS S S S+S S S + S R+++HR
Sbjct: 180 KSKVKKEEKKRHKSSSSSSSSS---SDSDSSSDSQSSSDSSDSESATEEKSKKRKKKHRK 236
Query: 71 SSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSH----SRSSERSSH 126
+S ++KR +S+ +S T R P + + +S ++
Sbjct: 237 NSRKHKKEKKKRKKSKKSASSESEAENLEAQPQSTVRPEEIPPIPENRFLMRKSPPKADE 296
Query: 127 RRTRSRSRDRERR-----------KGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLE 175
+ ++R R+RER + R R K KG+ + +
Sbjct: 297 KERKNRERERERECNPPNSQPASYQRRLLVTRSGRKIKGRGPRRYRTPSRSRSRDRFRRS 356
Query: 176 HLPP---AEQAKARLQLVL--EAAAKADEA----LKAKERNEEEAKRRKEEDQATLVEQV 226
PP E +A+ V E K D++ +K +R+ K RK D + E
Sbjct: 357 ETPPHWRQEMQRAQRMRVSSGERWIKGDKSELNEIKENQRSPVRVKERKITDHRNVSESP 416
Query: 227 KRVKEIEAIESD---SFVQQTFRSSKEVKKSVEPSEVKQATSTS 267
R E E D + ++ R + E + K+A S S
Sbjct: 417 NRKNEKEKKVKDHKSNSKERDIRRNSEKDDKYKNKVKKRAKSKS 460
Score = 45.1 bits (105), Expect = 9e-05
Identities = 41/163 (25%), Positives = 67/163 (41%), Gaps = 29/163 (17%)
Query: 54 DLQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPR 113
+L P+S ++ SSSSS S S S S + S
Sbjct: 176 ELIPKSKVKKEEKKRHKSSSSSSSS-------------------SSDSDSSSDSQSSSDS 216
Query: 114 LRSHSRSSERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAG 173
S S + E+S R+ + R R+ +K + K K+ K K + E N++ ++
Sbjct: 217 SDSESATEEKSKKRKKKHRKNSRKHKKEKKKRKKSK-KSASSESEAENLEAQPQSTVRP- 274
Query: 174 LEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKE 216
E +PP + + L+ ++ KADE KER E +R +E
Sbjct: 275 -EEIPPIPENRF---LMRKSPPKADE----KERKNRERERERE 309
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 82.4 bits (202), Expect = 5e-16
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 19/251 (7%)
Query: 7 DTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRR 66
DT ++ ++ KK + R R R++ R+ R + R R+ + R
Sbjct: 286 DTHKKLEEEKGKKEKERQEIEKERRERERERERE-RERREREREREREREREKEKERERE 344
Query: 67 RHRSSSSSSYGSR-RKRSRSRSRGRGKSYRVQRSRSKSRTR-RSRSRPRLRSHSRSSERS 124
R R R R R R R R R + R++ +SR+R +SR R R R R ER
Sbjct: 345 RERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERE 404
Query: 125 SHR-RTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPAEQA 183
R R R R R+RER + +RE+EKDK +D+E E ++ L A Q
Sbjct: 405 RERERERERERERERER-----EREREKDKKRDREEDEEDAYERRKLERKLREKEAAYQE 459
Query: 184 KARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKE-IEAIESDSFVQ 242
+ + + E + K R E+ R+EE + + ++ KR+KE +E + D
Sbjct: 460 RLKNWEIRE---------RKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDP 510
Query: 243 QTFRSSKEVKK 253
+ +R S K+
Sbjct: 511 KYYRGSALQKR 521
Score = 58.9 bits (141), Expect = 6e-09
Identities = 52/236 (22%), Positives = 102/236 (43%), Gaps = 23/236 (9%)
Query: 4 RSSD-TEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQP----- 57
RSSD ++ SRS+ K + R R R R++ + R + R R+ +
Sbjct: 373 RSSDRNKDRSRSREKSRDREREREREREREREREREREREREREREREREREREKDKKRD 432
Query: 58 ----RSHSYDRRRRHRS--SSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRR---- 107
+Y+RR+ R ++Y R K R R + + Y + R + R R
Sbjct: 433 REEDEEDAYERRKLERKLREKEAAYQERLKNWEIRERKKTREYEKEAEREEERRREMAKE 492
Query: 108 -SRSRPRLRSHSRSSERSSHRR---TRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIK 163
R + L + + + R + R RDRE+ D+ R++EK++ ++ +
Sbjct: 493 AKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEMEADERDRKREKEELEEIRQRLLA 552
Query: 164 RGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQ 219
G + A L+ + ++A+ R Q ++ +++E + K+ EE+ + EE++
Sbjct: 553 EGHP-DPDAELQRME--QEAERRRQPQIKQEPESEEEEEEKQEKEEKREEPMEEEE 605
Score = 56.6 bits (135), Expect = 3e-08
Identities = 49/203 (24%), Positives = 83/203 (40%), Gaps = 26/203 (12%)
Query: 83 SRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSERSSHRRTRSRSRDRERRKGR 142
SR S+ R +++ + K R R R ER RR R R R+RER + +
Sbjct: 278 SREISKFRDTHKKLEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREK 337
Query: 143 DKEK-----------REKEKDKGKDKEL-----------HNIKRGESGNIKAGLEHLPPA 180
+KE+ R KE+D+ +D+E N R S E
Sbjct: 338 EKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERER 397
Query: 181 EQAKARLQLVLEAAAKADEALKAKERNEEEAKRR-KEEDQATLVEQVK---RVKEIEAIE 236
E+ + R + + E + +ER E+ K+R +EED+ E+ K +++E EA
Sbjct: 398 EREREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAAY 457
Query: 237 SDSFVQQTFRSSKEVKKSVEPSE 259
+ R K+ ++ + +E
Sbjct: 458 QERLKNWEIRERKKTREYEKEAE 480
Score = 35.4 bits (80), Expect = 0.072
Identities = 38/195 (19%), Positives = 70/195 (35%), Gaps = 42/195 (21%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKS-------RSW---- 51
R E R + ++K ++R D+ Y R+K RK R K ++W
Sbjct: 411 REREREREREREREREKDKKRDREEDEEDA--YERRKLERKLREKEAAYQERLKNWEIRE 468
Query: 52 ---SRDLQPRSHSYDRRRRHRSSSSSSY-------------------GSRRKRSRSRSRG 89
+R+ + + + RRR + + + +KR R R +
Sbjct: 469 RKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKE 528
Query: 90 RGKSYRVQRSRSKSRTRRSRSRPRLRSHS------RSSERSSHRRTRSRSRDRERRKGRD 143
R R R K R R H + E+ + RR + + + + +
Sbjct: 529 MEADER-DRKREKEELEEIRQRLLAEGHPDPDAELQRMEQEAERRRQPQIKQEPESEEEE 587
Query: 144 KEKREKEKDKGKDKE 158
+EK+EKE+ + + E
Sbjct: 588 EEKQEKEEKREEPME 602
>gi|52426743 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 81.3 bits (199), Expect = 1e-15
Identities = 63/178 (35%), Positives = 89/178 (50%), Gaps = 14/178 (7%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKS-RSKSRSWSRDLQPRSHS 61
+R+ + + + R K++K+ R + RK+ + R K R+ R+ + RS S
Sbjct: 236 KRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRS 295
Query: 62 YDRRRRHRSSSSSSYGSR-RKRSRSRSRGRGKSYRVQRSRSKS-----RTRRSRSRPRLR 115
R RH S +S SR R RSRSR R +S R RS+S R RSRSR R R
Sbjct: 296 ---RSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRR 352
Query: 116 SHSRSSERSSHRRTRSRSRDRER-RKGRDKEKREKEKDKGKDKELHNIKRGESGNIKA 172
S SR + H RS+SRDRE+ RK ++KEKR + K K K+ E N ++
Sbjct: 353 SKSRDRKSYKH---RSKSRDREQDRKSKEKEKRGSDDKKSSVKSGSREKQSEDTNTES 407
Score = 79.0 bits (193), Expect = 6e-15
Identities = 66/174 (37%), Positives = 89/174 (51%), Gaps = 25/174 (14%)
Query: 8 TEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRR 67
TEE R +R KK ++ R R+ R + R + + + + DR RR
Sbjct: 238 TEEPDRDERLKKEKQEREEREKERERE-------REERERKRRREEEEREKERARDRERR 290
Query: 68 HRSSSSSSYGSRRKRSR-SRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSERSSH 126
RS S S + SR R SRSR +RSRS+ R RRSRSR R R SRS +R S
Sbjct: 291 KRSRSRSRHSSRTSDRRCSRSRDH------KRSRSRER-RRSRSRDRRR--SRSHDR-SE 340
Query: 127 RRTRSRSRDRERRKGRDKEK---REKEKDKGKD-KELHNIKRG---ESGNIKAG 173
R+ RSRSRDR R K RD++ R K +D+ +D K KRG + ++K+G
Sbjct: 341 RKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSG 394
Score = 72.4 bits (176), Expect = 5e-13
Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 1 MGRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSH 60
MG++ + + + K + R + ++K R+ R K R R+ + R
Sbjct: 213 MGKQHMGYAKIKATVEELKEKLRKRTEEPDRDERLKKEKQEREEREKEREREREERERK- 271
Query: 61 SYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRT-RRSRSRPRLRSHSR 119
RRR R +R RSRSR R S R S+SR +RSRSR R RS SR
Sbjct: 272 ---RRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSR 328
Query: 120 SSERS-SHRRT--RSRSRDRERRKGRDKEKRE-KEKDKGKDKE 158
RS SH R+ + RSR R+RR+ + ++++ K + K +D+E
Sbjct: 329 DRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDRE 371
Score = 60.5 bits (145), Expect = 2e-09
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 42/207 (20%)
Query: 43 KSRSKSRSWSRDLQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSK 102
K R ++ RD + + +R R + R + R R R R + R ++ R++
Sbjct: 233 KLRKRTEEPDRDERLKKEKQEREEREKERE------REREERERKRRREEEER-EKERAR 285
Query: 103 SRTRRSRSRPRLRSHSRSSERS-----SHRRTRS----RSRDRERRKGRDKEKRE-KEKD 152
R RR RSR R R SR+S+R H+R+RS RSR R+RR+ R ++ E K +
Sbjct: 286 DRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRS 345
Query: 153 KGKDKELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAK 212
+ +D+ ++K+R + + +K+ + + ++R +E +
Sbjct: 346 RSRDR-----------------------RRSKSRDRKSYKHRSKSRD--REQDRKSKEKE 380
Query: 213 RRKEEDQATLVEQVKRVKEIEAIESDS 239
+R +D+ + V+ R K+ E ++S
Sbjct: 381 KRGSDDKKSSVKSGSREKQSEDTNTES 407
>gi|19923485 cisplatin resistance-associated overexpressed protein
[Homo sapiens]
Length = 432
Score = 81.3 bits (199), Expect = 1e-15
Identities = 63/178 (35%), Positives = 89/178 (50%), Gaps = 14/178 (7%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKS-RSKSRSWSRDLQPRSHS 61
+R+ + + + R K++K+ R + RK+ + R K R+ R+ + RS S
Sbjct: 236 KRTEEPDRDERLKKEKQEREEREKEREREREERERKRRREEEEREKERARDRERRKRSRS 295
Query: 62 YDRRRRHRSSSSSSYGSR-RKRSRSRSRGRGKSYRVQRSRSKS-----RTRRSRSRPRLR 115
R RH S +S SR R RSRSR R +S R RS+S R RSRSR R R
Sbjct: 296 ---RSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRSRSRDRRR 352
Query: 116 SHSRSSERSSHRRTRSRSRDRER-RKGRDKEKREKEKDKGKDKELHNIKRGESGNIKA 172
S SR + H RS+SRDRE+ RK ++KEKR + K K K+ E N ++
Sbjct: 353 SKSRDRKSYKH---RSKSRDREQDRKSKEKEKRGSDDKKSSVKSGSREKQSEDTNTES 407
Score = 79.0 bits (193), Expect = 6e-15
Identities = 66/174 (37%), Positives = 89/174 (51%), Gaps = 25/174 (14%)
Query: 8 TEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRR 67
TEE R +R KK ++ R R+ R + R + + + + DR RR
Sbjct: 238 TEEPDRDERLKKEKQEREEREKERERE-------REERERKRRREEEEREKERARDRERR 290
Query: 68 HRSSSSSSYGSRRKRSR-SRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSERSSH 126
RS S S + SR R SRSR +RSRS+ R RRSRSR R R SRS +R S
Sbjct: 291 KRSRSRSRHSSRTSDRRCSRSRDH------KRSRSRER-RRSRSRDRRR--SRSHDR-SE 340
Query: 127 RRTRSRSRDRERRKGRDKEK---REKEKDKGKD-KELHNIKRG---ESGNIKAG 173
R+ RSRSRDR R K RD++ R K +D+ +D K KRG + ++K+G
Sbjct: 341 RKHRSRSRDRRRSKSRDRKSYKHRSKSRDREQDRKSKEKEKRGSDDKKSSVKSG 394
Score = 72.4 bits (176), Expect = 5e-13
Identities = 52/163 (31%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 1 MGRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSH 60
MG++ + + + K + R + ++K R+ R K R R+ + R
Sbjct: 213 MGKQHMGYAKIKATVEELKEKLRKRTEEPDRDERLKKEKQEREEREKEREREREERERK- 271
Query: 61 SYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRT-RRSRSRPRLRSHSR 119
RRR R +R RSRSR R S R S+SR +RSRSR R RS SR
Sbjct: 272 ---RRREEEEREKERARDRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSR 328
Query: 120 SSERS-SHRRT--RSRSRDRERRKGRDKEKRE-KEKDKGKDKE 158
RS SH R+ + RSR R+RR+ + ++++ K + K +D+E
Sbjct: 329 DRRRSRSHDRSERKHRSRSRDRRRSKSRDRKSYKHRSKSRDRE 371
Score = 60.5 bits (145), Expect = 2e-09
Identities = 51/207 (24%), Positives = 96/207 (46%), Gaps = 42/207 (20%)
Query: 43 KSRSKSRSWSRDLQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSK 102
K R ++ RD + + +R R + R + R R R R + R ++ R++
Sbjct: 233 KLRKRTEEPDRDERLKKEKQEREEREKERE------REREERERKRRREEEER-EKERAR 285
Query: 103 SRTRRSRSRPRLRSHSRSSERS-----SHRRTRS----RSRDRERRKGRDKEKRE-KEKD 152
R RR RSR R R SR+S+R H+R+RS RSR R+RR+ R ++ E K +
Sbjct: 286 DRERRKRSRSRSRHSSRTSDRRCSRSRDHKRSRSRERRRSRSRDRRRSRSHDRSERKHRS 345
Query: 153 KGKDKELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAK 212
+ +D+ ++K+R + + +K+ + + ++R +E +
Sbjct: 346 RSRDR-----------------------RRSKSRDRKSYKHRSKSRD--REQDRKSKEKE 380
Query: 213 RRKEEDQATLVEQVKRVKEIEAIESDS 239
+R +D+ + V+ R K+ E ++S
Sbjct: 381 KRGSDDKKSSVKSGSREKQSEDTNTES 407
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 80.5 bits (197), Expect = 2e-15
Identities = 66/287 (22%), Positives = 119/287 (41%), Gaps = 32/287 (11%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSY 62
R+ E R ++ ++ R + + + R R K + R + R R + R
Sbjct: 224 RKRQTDRERDRQRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQT 283
Query: 63 DRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSR-------TRRSRSRPRLR 115
DR+R+ R+ +R+R R R R R ++ + +R R + R T R R + R R
Sbjct: 284 DRKRQRRTERDRETERKRERQRERERERERNRKRERERERERERERQRETERDREKERER 343
Query: 116 SHSRSSERSSHR-------------RTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNI 162
R +E R R R R R+R+R+ R++E+RE+++D+ + KE
Sbjct: 344 KRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKER--- 400
Query: 163 KRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRR---KEEDQ 219
+R + E E+ K R + E K +ER+ E R ++ +
Sbjct: 401 ERQTEKDRDGQRETEKQREREKDRESERGRERGREREKQKGRERDRERQTDRQAGRQRKR 460
Query: 220 ATL-VEQVKRVKEIEAIESDSFVQQTFRSSKEVKKSVEPSEVKQATS 265
+TL V R ++SD R ++ ++ P + K A++
Sbjct: 461 STLYVNPPPRTARSGVVQSD-----PNRPTRGIRWKSSPEDPKAAST 502
Score = 74.3 bits (181), Expect = 1e-13
Identities = 57/230 (24%), Positives = 98/230 (42%), Gaps = 10/230 (4%)
Query: 2 GRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHS 61
G R D + + + +R+ R+R + R++ ++R K R ++ Q R
Sbjct: 135 GERGRDRQTDGQRERE---RQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRE- 190
Query: 62 YDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTR-RSRSRPRLRSHSRS 120
R R R + + +R R R R R +R R R R R R R R
Sbjct: 191 ---RERQREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAE 247
Query: 121 SERSSHRRT-RSRSRDRERRKGRDKEKREKEKDKGKD-KELHNIKRGESGNIKAGLEHLP 178
ER+S R T R + R+RER + RD+++R+KE+++ D K +R K +
Sbjct: 248 RERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRER 307
Query: 179 PAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKR 228
E+ + R + + E + ER+ E+ + RK + Q + + R
Sbjct: 308 ERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNR 357
Score = 73.2 bits (178), Expect = 3e-13
Identities = 68/285 (23%), Positives = 125/285 (43%), Gaps = 23/285 (8%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSD-------SRTYSRKKGGRKSRSKSRSWSRDL 55
R+ E++R +R+++ R+R + + D R R+ R + RD
Sbjct: 175 RQKEREREKNRQERRERERQREKENKTEDRHSERGRERERERETETETERKRQTDRERDR 234
Query: 56 QPRSHSYDRRRRHRSSSSSSYGSR-----RKRSRSRSRGRGKSYRVQRSRSKS--RTRRS 108
Q ++ ++ R +S R R+R R R R R + R +++ K RT R
Sbjct: 235 QRKTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERD 294
Query: 109 RSRPRLRSHSRSSERSSHR-RTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGE- 166
R R R R ER R R R R R+RER + R +RE E+D+ K++E ++ E
Sbjct: 295 RETERKRERQRERERERERNRKRERERERERERER---QRETERDREKERERKRKRQTEM 351
Query: 167 --SGNIKAGLEHLPPAEQAKAR-LQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLV 223
N + G E AE+ + R + ++A + +E + ++R+ ++ + R+ E
Sbjct: 352 DRERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDRDGQ 411
Query: 224 EQVKRVKEIEAIESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSG 268
+ ++ +E E ++ R +E +K E +Q +G
Sbjct: 412 RETEKQREREKDRESERGRERGR-EREKQKGRERDRERQTDRQAG 455
Score = 69.3 bits (168), Expect = 4e-12
Identities = 62/263 (23%), Positives = 117/263 (44%), Gaps = 17/263 (6%)
Query: 4 RSSDTEEESRSKRKKKHRRRSSSSSSSDS---RTYSRKKGGRKSRSKSRSWSRDLQP-RS 59
+ +D ++ R+++K++ RRR + ++ R R+K + R + R RD + R
Sbjct: 47 KDADGDDRERNRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERE 106
Query: 60 HSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTR---RSRSRPRLRS 116
DR R + + R+R R RG+ + R + R R + R R R
Sbjct: 107 RQTDRERDRQREKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRE 166
Query: 117 HSRSSERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIK---RGESGNIKAG 173
R +ER+ R + R R++ R++ R++E R++EK+ K ++ H+ + R +
Sbjct: 167 RQRQTERN---RQKEREREKNRQERRERE-RQREKE-NKTEDRHSERGRERERERETETE 221
Query: 174 LEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIE 233
E ++ + R + K E +A ER E K R+ E ++ +R KE E
Sbjct: 222 TERKRQTDRERDRQRKTEREREKQAERERASERETERDKERERERDRDR-DRDRRQKERE 280
Query: 234 AIESDSFVQQTFRSSKEVKKSVE 256
++D Q+ +E ++ E
Sbjct: 281 R-QTDRKRQRRTERDRETERKRE 302
Score = 64.7 bits (156), Expect = 1e-10
Identities = 62/246 (25%), Positives = 106/246 (43%), Gaps = 25/246 (10%)
Query: 56 QPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRR--SRSRPR 113
+P S RRR + + G R+R+R + R +R R K +T R R R R
Sbjct: 30 RPGSQESPRRRGLGQAHKDADGDDRERNRQKER--------ERRREKRQTERETDRKRER 81
Query: 114 LRSHSRSSERSSHR-RTRSRSRDRERRKGRDKEK-REKEKDKGKDKELHNIKRGESGNIK 171
R R +R HR R R R ++RER+ R++++ REKE+++ K++E + GE G +
Sbjct: 82 RREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDR 141
Query: 172 ---AGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEE-------EAKRRKEEDQAT 221
E + K R + + E + KER E E +R++E++ T
Sbjct: 142 QTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKT 201
Query: 222 LVEQVKRVKEIE---AIESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPS 278
+R +E E E+++ ++ ++ ++ E KQA
Sbjct: 202 EDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKE 261
Query: 279 TEKEID 284
E+E D
Sbjct: 262 RERERD 267
Score = 63.5 bits (153), Expect = 2e-10
Identities = 52/274 (18%), Positives = 113/274 (41%), Gaps = 16/274 (5%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQP----- 57
R+ E+ R +++ +HR R R R++ ++ + ++R R+ +
Sbjct: 77 RKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGE 136
Query: 58 --RSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLR 115
R D +R + R+ R R R ++ + +R R K+R R R R R R
Sbjct: 137 RGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQER-RERERQR 195
Query: 116 SHSRSSERSSHRRTRSRSRDRE------RRKGRDKEK-REKEKDKGKDKELHNIKRGESG 168
+E R R R R+RE R++ D+E+ R+++ ++ ++K+ +R
Sbjct: 196 EKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAER-ERASER 254
Query: 169 NIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKR 228
+ E ++ + R + E + D + + + E +R++E + E+ +
Sbjct: 255 ETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERN 314
Query: 229 VKEIEAIESDSFVQQTFRSSKEVKKSVEPSEVKQ 262
K E + ++ + ++ +K E +Q
Sbjct: 315 RKRERERERERERERQRETERDREKERERKRKRQ 348
Score = 52.0 bits (123), Expect = 7e-07
Identities = 45/210 (21%), Positives = 89/210 (42%), Gaps = 15/210 (7%)
Query: 35 YSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSY 94
+SR++ G + + R L D R R+ R KR R R +
Sbjct: 26 FSRRRPGSQESPRRRG----LGQAHKDADGDDRERNRQKERERRREKRQTERETDRKRER 81
Query: 95 RVQRSRSKSRTR-RSRSRPRLRSHSRSSERSSHR---RTRSRSRDRER------RKGRDK 144
R ++ R + R R R R R R + R ++R R + R+R ++RER +GRD+
Sbjct: 82 RREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREGERGRDR 141
Query: 145 E-KREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKA 203
+ ++E+++ +D E ++ + + + + + Q E + ++ K
Sbjct: 142 QTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQREKENKT 201
Query: 204 KERNEEEAKRRKEEDQATLVEQVKRVKEIE 233
++R+ E + R+ E + + KR + E
Sbjct: 202 EDRHSERGRERERERETETETERKRQTDRE 231
>gi|239747891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 202
Score = 79.3 bits (194), Expect = 4e-15
Identities = 51/164 (31%), Positives = 81/164 (49%), Gaps = 5/164 (3%)
Query: 4 RSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYD 63
R + TE E+R +++ +HR R + R R+K + R + R R+ + +
Sbjct: 27 RENQTERENRHRQRDRHRERDRQTDREKER--ERQKERDRQRQRERETERETERQRERQR 84
Query: 64 RRRRHRSSSSSSYGSR-RKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSE 122
+R R R + R R+R R R R ++ + R R K +T R R R R R R E
Sbjct: 85 QRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDK-QTERERDRERERQRQRERE 143
Query: 123 RSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGE 166
R +R R R DRER++ ++E+R+KE+ K + KE K+ E
Sbjct: 144 RQ-RQRERKRETDRERQRWAEREERKKERKKERKKERKEKKKEE 186
Score = 66.6 bits (161), Expect = 3e-11
Identities = 55/215 (25%), Positives = 93/215 (43%), Gaps = 29/215 (13%)
Query: 4 RSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYD 63
R +T+ ++R++ +R + + ++R R + + R R R+ R D
Sbjct: 7 RKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERE---RQKERD 63
Query: 64 RRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTR-RSRSRPRLRSHSRSSE 122
R+R+ + +R+R R R R R + R R K R R R R R R +R
Sbjct: 64 RQRQRERETERETERQRERQRQRERKR----QTDRERDKDRDRERKRETDRNRERNRKGG 119
Query: 123 RSSHRRT-RSRSRDRERRKGRDKEK-REKEKDKGKDKELHNIKRGESGNIKAGLEHLPPA 180
R ++T R R R+RER++ R++E+ R++E+ + D+E E
Sbjct: 120 RERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAERE-------------- 165
Query: 181 EQAKARLQLVLEAAAKADEALKAKERNEEEAKRRK 215
E+ K R + K + K KE E K+RK
Sbjct: 166 ERKKER-----KKERKKERKEKKKEEKRREDKKRK 195
Score = 66.2 bits (160), Expect = 4e-11
Identities = 53/199 (26%), Positives = 82/199 (41%), Gaps = 9/199 (4%)
Query: 45 RSKSRSWSRDLQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSR 104
R + R D + R+R R + + R+R R R R R +R R K R
Sbjct: 3 RQRERKRETDRGKETERERDRQRERENQTERENRHRQRDRHRERDRQTDREKERERQKER 62
Query: 105 TR-RSRSRPRLRSHSRSSERSSHRRTRSRSRDRERRKGRDKEK-------REKEKDKGKD 156
R R R R R R ER +R R R DRER K RD+E+ RE+ + G++
Sbjct: 63 DRQRQRERETERETERQRERQ-RQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRE 121
Query: 157 KELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKE 216
++ + + + Q + + + E A+ + KER +E K RKE
Sbjct: 122 RDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKERKKERKE 181
Query: 217 EDQATLVEQVKRVKEIEAI 235
+ + + K+ K E I
Sbjct: 182 KKKEEKRREDKKRKWGEGI 200
Score = 57.4 bits (137), Expect = 2e-08
Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 30/195 (15%)
Query: 63 DRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTR-------------RSR 109
+R+R + + + R+R R R R ++ R R R + R R R +
Sbjct: 2 ERQRERKRETDRGKETERERDRQRER-ENQTERENRHRQRDRHRERDRQTDREKERERQK 60
Query: 110 SRPRLRSHSRSSERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGN 169
R R R R +ER + R+ R R R RER++ D+E R+K++D+ + +E R N
Sbjct: 61 ERDRQRQRERETERETERQ-RERQRQRERKRQTDRE-RDKDRDRERKRE---TDRNRERN 115
Query: 170 IKAGLEHLPPAEQAKAR-----------LQLVLEAAAKADEALKAKERNEEEAKRRKEED 218
K G E E+ + R Q E + D + EE K RK+E
Sbjct: 116 RKGGRERDKQTERERDRERERQRQRERERQRQRERKRETDRERQRWAEREERKKERKKER 175
Query: 219 QATLVEQVKRVKEIE 233
+ E+ K K E
Sbjct: 176 KKERKEKKKEEKRRE 190
Score = 55.8 bits (133), Expect = 5e-08
Identities = 38/154 (24%), Positives = 71/154 (46%), Gaps = 29/154 (18%)
Query: 3 RRSSDTEEES---RSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRS 59
+R +TE E+ R +++++ R+R + R RK+ ++R ++R R+ +
Sbjct: 67 QRERETERETERQRERQRQRERKRQTDRERDKDRDRERKRETDRNRERNRKGGRERDKQ- 125
Query: 60 HSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSR 119
+ R+R R R R R QR R + R +R R R R R
Sbjct: 126 ------------------TERERDRERERQR------QRERERQR-QRERKRETDRERQR 160
Query: 120 SSERSSHRRTRSRSRDRERRKGRDKEKREKEKDK 153
+ER ++ R + R +ER++ + +EKR ++K +
Sbjct: 161 WAEREERKKERKKERKKERKEKKKEEKRREDKKR 194
>gi|116812577 LUC7-like 2 [Homo sapiens]
Length = 392
Score = 79.0 bits (193), Expect = 6e-15
Identities = 59/161 (36%), Positives = 86/161 (53%), Gaps = 17/161 (10%)
Query: 11 ESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRRHRS 70
E R + +++ RRS S S + R+ SR+ R+ RS+S S R + RS S ++R RHRS
Sbjct: 248 EEREREEREKLRRSRSHSKNPKRSRSREH--RRHRSRSMSRERKRRTRSKSREKRHRHRS 305
Query: 71 SSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSS-ERSSHRRT 129
SSS R RSRS R R S R RS+ R++R S+ R R +S +R R
Sbjct: 306 RSSS-----RSRSRSHQRSRHSS----RDRSRERSKRRSSKERFRDQDLASCDRDRSSRD 356
Query: 130 RSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNI 170
RS RDR+R+ +KR E G+ ++ + + E+G I
Sbjct: 357 RS-PRDRDRK----DKKRSYESANGRSEDRRSSEEREAGEI 392
Score = 72.8 bits (177), Expect = 4e-13
Identities = 58/161 (36%), Positives = 83/161 (51%), Gaps = 19/161 (11%)
Query: 9 EEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRRH 68
EE R +K+ +R + R ++ R+SRS S++ R + R H RRH
Sbjct: 226 EELKRVVAEKQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRS-RSREH-----RRH 279
Query: 69 RSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTR-RSRSRPRLRSHSRSSERSSHR 127
RS S S R ++ R+RS+ R K +R RSRS SR+R RS R R S RS ERS R
Sbjct: 280 RSRSMS----RERKRRTRSKSREKRHR-HRSRSSSRSRSRSHQRSRHSSRDRSRERSKRR 334
Query: 128 RTRSRSRDRE------RRKGRDKEKREKE-KDKGKDKELHN 161
++ R RD++ R RD+ R+++ KDK + E N
Sbjct: 335 SSKERFRDQDLASCDRDRSSRDRSPRDRDRKDKKRSYESAN 375
Score = 68.2 bits (165), Expect = 1e-11
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 15/169 (8%)
Query: 45 RSKSRSWSRDLQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSY---RVQRSRS 101
+ + R+ R + + R + R S S S +R RSR R R +S R +R+RS
Sbjct: 235 KQEKRNQERLKRREEREREEREKLRRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRS 294
Query: 102 KSRTRRSRSRPRLRSHSRSSERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHN 161
KSR +R R R R S SRS SH+R+R SRDR R++ KR K++ +D++L +
Sbjct: 295 KSREKRHRHRSRSSSRSRSR---SHQRSRHSSRDR----SRERSKRRSSKERFRDQDLAS 347
Query: 162 IKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEE 210
R S + P K + + A ++++ ++ER E
Sbjct: 348 CDRDRSSR-----DRSPRDRDRKDKKRSYESANGRSEDRRSSEEREAGE 391
Score = 58.9 bits (141), Expect = 6e-09
Identities = 50/147 (34%), Positives = 68/147 (46%), Gaps = 18/147 (12%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKS-RSKSRSWSRDLQPRSHS 61
RRS + + R ++HRR S S S + + +R K K R +SRS SR + RSH
Sbjct: 259 RRSRSHSKNPKRSRSREHRRHRSRSMSRERKRRTRSKSREKRHRHRSRSSSRS-RSRSH- 316
Query: 62 YDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSS 121
+R RH S S S+R+ S+ R +R Q S R R SR R R R
Sbjct: 317 --QRSRHSSRDRSRERSKRRSSKER-------FRDQDLASCDRDRSSRDRSP-RDRDRKD 366
Query: 122 ERSSHRRTRSRSRDRERRKGRDKEKRE 148
++ S+ RS DR R E+RE
Sbjct: 367 KKRSYESANGRSEDR-----RSSEERE 388
Score = 57.0 bits (136), Expect = 2e-08
Identities = 40/143 (27%), Positives = 61/143 (42%), Gaps = 1/143 (0%)
Query: 79 RRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSERSSHRRTRSRSRDRER 138
R KR R R + R RS SK+ +RSRSR R SRS R RRTRS+SR++
Sbjct: 243 RLKRREEREREEREKLRRSRSHSKN-PKRSRSREHRRHRSRSMSRERKRRTRSKSREKRH 301
Query: 139 RKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKAD 198
R R + + + + + E ++ E + A + D
Sbjct: 302 RHRSRSSSRSRSRSHQRSRHSSRDRSRERSKRRSSKERFRDQDLASCDRDRSSRDRSPRD 361
Query: 199 EALKAKERNEEEAKRRKEEDQAT 221
K K+R+ E A R E+ +++
Sbjct: 362 RDRKDKKRSYESANGRSEDRRSS 384
Score = 40.4 bits (93), Expect = 0.002
Identities = 30/139 (21%), Positives = 57/139 (41%), Gaps = 24/139 (17%)
Query: 81 KRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSERSSHRRTRSRSRDRERRK 140
KR + + + R++R + R R + R R RSHS++ +RS RSR+ R +
Sbjct: 229 KRVVAEKQEKRNQERLKRREEREREEREKLR-RSRSHSKNPKRS-------RSREHRRHR 280
Query: 141 GRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEA 200
R + K + + K +E + R S + H ++ R
Sbjct: 281 SRSMSRERKRRTRSKSREKRHRHRSRSSSRSRSRSHQRSRHSSRDR-------------- 326
Query: 201 LKAKERNEEEAKRRKEEDQ 219
++ER++ + + + DQ
Sbjct: 327 --SRERSKRRSSKERFRDQ 343
>gi|134152708 arginine and glutamate rich 1 [Homo sapiens]
Length = 273
Score = 78.6 bits (192), Expect = 7e-15
Identities = 63/224 (28%), Positives = 102/224 (45%), Gaps = 7/224 (3%)
Query: 65 RRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSERS 124
R R RSSS S + K ++ RSR R +S +R R +S++R S+ R S SRS RS
Sbjct: 3 RSRSRSSSRSKHTKSSKHNKKRSRSRSRSRDKERVRKRSKSRESKRNRRRESRSRS--RS 60
Query: 125 SHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPAEQAK 184
++ R RDRER + K L ++ E KA E Q +
Sbjct: 61 TNTAVSRRERDRERASSPPDRIDIFGRTVSKRSSLDEKQKREEEEKKAEFERQRKIRQQE 120
Query: 185 ARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATL--VEQVKRVKE---IEAIESDS 239
+L+ E A+ E L AK EE KR+ E ++ L VE+ KR+ E +E +E
Sbjct: 121 IEEKLIEEETARRVEELVAKRVEEELEKRKDEIEREVLRRVEEAKRIMEKQLLEELERQR 180
Query: 240 FVQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKEI 283
+ + ++E ++ + E+++ + A A E+++
Sbjct: 181 QAELAAQKAREEEERAKREELERILEENNRKIAEAQAKLAEEQL 224
Score = 63.5 bits (153), Expect = 2e-10
Identities = 70/274 (25%), Positives = 113/274 (41%), Gaps = 38/274 (13%)
Query: 1 MGRRSSDTEEESRSKRKKKH-RRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRS 59
MGR S + S+ + KH ++RS SR+ SR K + RSKSR R
Sbjct: 1 MGRSRSRSSSRSKHTKSSKHNKKRSR------SRSRSRDKERVRKRSKSRESKR------ 48
Query: 60 HSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQ-RSRSKSRTRRSRSRPRLRSHS 118
+RRR RS S S+ + +R R R R R+ R+ S+ + +
Sbjct: 49 ---NRRRESRSRSRSTNTAVSRRERDRERASSPPDRIDIFGRTVSKRSSLDEKQKREEEE 105
Query: 119 RSSERSSHRRTRSRS------------RDRERRKGRDKEKREKEKDKGKDKELHNIKRGE 166
+ +E R+ R + R E R +E+ EK KD+ + + L ++ +
Sbjct: 106 KKAEFERQRKIRQQEIEEKLIEEETARRVEELVAKRVEEELEKRKDEIEREVLRRVEEAK 165
Query: 167 SGNIKAGLEHLPPAEQAKARLQLVLEAAAKA-----DEALKAKERNEEEAKRRKEEDQAT 221
K LE L QA+ Q E +A + L+ R EA+ + E+Q
Sbjct: 166 RIMEKQLLEELERQRQAELAAQKAREEEERAKREELERILEENNRKIAEAQAKLAEEQLR 225
Query: 222 LVEQVKRVKEIEAIESDSFVQQTFRSSKEVKKSV 255
+VE+ +++ E E Q+ R KE +K +
Sbjct: 226 IVEEQRKIHE----ERMKLEQERQRQQKEEQKII 255
>gi|239749449 PREDICTED: hypothetical protein [Homo sapiens]
Length = 275
Score = 78.2 bits (191), Expect = 1e-14
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 15/171 (8%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSY 62
RR + + R K +K+ R + ++ RK R K R R+ + R
Sbjct: 40 RREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRKEREKQRKERREKERRKRKK 99
Query: 63 DRRRRHRSSSSSSYGSRRK------------RSRSRSRGRGKSYRVQRSRSKSRTRRSRS 110
++++R R ++K R R R + R K R +R R K R +R R
Sbjct: 100 EKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKKRRKERKREKERGKRERK 159
Query: 111 RPRLRSHSRSSERSSHRRTRSRSRDRERRKGRDKEK---REKEKDKGKDKE 158
R + + R +R +R+ R + R+R+ R+ R KE+ R K+K++ KD++
Sbjct: 160 RKKRKKEEREKKRERNRKERKKERERKERRERKKERKKERRKKKERKKDRK 210
Score = 70.9 bits (172), Expect = 2e-12
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 4/164 (2%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSY 62
+R S+ ++E R + K+K R + +KK ++ R K R R + +
Sbjct: 31 QRESERKKERREREKRKREREKERKRERGKK--EKKKRKKRERGKERERKRKEREKQRK- 87
Query: 63 DRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSE 122
+RR + R R ++ R R + K R +R R +++ RR R R + R R E
Sbjct: 88 ERREKERRKRKKEKKKRERKQRGRRERKKKKERKERER-ENKQRRERKRKKRRKKKRRKE 146
Query: 123 RSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGE 166
R + R R R++RK ++EK+ + K + KE +R E
Sbjct: 147 RKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRE 190
Score = 68.2 bits (165), Expect = 1e-11
Identities = 53/209 (25%), Positives = 92/209 (44%), Gaps = 21/209 (10%)
Query: 11 ESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRRHRS 70
+ S+RKK+ R R + R R+K ++ R K R + R +R+R+ R
Sbjct: 31 QRESERKKERRER-------EKRKREREKERKRERGKKEKKKRKKRERGKERERKRKERE 83
Query: 71 SSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSERSSHRRTR 130
R K R R + + K R QR R + + ++ R + R R + + ER +R R
Sbjct: 84 KQRKE--RREKERRKRKKEKKKRERKQRGRRERKKKKER-KERERENKQRRERKRKKR-R 139
Query: 131 SRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPAEQAKARLQLV 190
+ R +ER++ +++ KRE+++ K K +E + K E E+ K R +
Sbjct: 140 KKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKK-- 197
Query: 191 LEAAAKADEALKAKERNEEEAKRRKEEDQ 219
E K KER ++ R+ + Q
Sbjct: 198 --------ERRKKKERKKDRKTDRQTDSQ 218
Score = 63.5 bits (153), Expect = 2e-10
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 6/168 (3%)
Query: 52 SRDLQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSR 111
S+ R + RR R RKR R + K R +R R K R R+ + R
Sbjct: 26 SKPCTQRESERKKERREREKRKREREKERKRERGKKE---KKKRKKRERGKERERKRKER 82
Query: 112 PRLRSHSRSSERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIK 171
+ R R ER ++ + + ++R + K+K+E+++ + ++K+ KR + K
Sbjct: 83 EKQRKERREKERRKRKKEKKKRERKQRGRRERKKKKERKERERENKQRRERKRKKRRKKK 142
Query: 172 AGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQ 219
E E+ K + K +E K +ERN +E K+ +E +
Sbjct: 143 RRKERKREKERGKRERK---RKKRKKEEREKKRERNRKERKKERERKE 187
Score = 60.1 bits (144), Expect = 3e-09
Identities = 49/225 (21%), Positives = 99/225 (44%), Gaps = 7/225 (3%)
Query: 73 SSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSERSSHRRTRSR 132
S S+ S+ R R + + R +R R + + R+ + + + ER R + +
Sbjct: 21 SCSHISKPCTQRESERKKERREREKRKREREKERKRERGKKEKKKRKKRERGKERERKRK 80
Query: 133 SRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLE 192
R+++R++ R+KE+R+++K+K K +E R E K E +Q + R +
Sbjct: 81 EREKQRKERREKERRKRKKEK-KKRERKQRGRRERKKKKERKERERENKQRRERKRKKRR 139
Query: 193 AAAKADEALKAKERNEEEAKR--RKEEDQATLVEQVKRVKEIEAIESDSFVQQTFRSSKE 250
+ E + KER + E KR RK+E++ E+ ++ ++ E + ++ R +
Sbjct: 140 KKKRRKERKREKERGKRERKRKKRKKEEREKKRERNRKERKKERERKERRERKKERKKER 199
Query: 251 VKKSVEPSEVKQATSTSGPASAVADPPSTEKEIDPTSIPTAIKYQ 295
KK E K+ T + P E + ++ +Y+
Sbjct: 200 RKK----KERKKDRKTDRQTDSQVFRPLRESAFNRVTVTGVFRYR 240
Score = 45.4 bits (106), Expect = 7e-05
Identities = 44/189 (23%), Positives = 74/189 (39%), Gaps = 60/189 (31%)
Query: 2 GRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHS 61
GRR ++E R +R++++++R R RKK +K R K R
Sbjct: 110 GRRERKKKKE-RKERERENKQR---------RERKRKKRRKKKRRKER------------ 147
Query: 62 YDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSS 121
R K R R R K + +R + + R R+ R + R R
Sbjct: 148 ----------------KREKERGKRERKRKKRKKEEREKKRERNRKERKKERER------ 185
Query: 122 ERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGN------------ 169
RR R + R +ERRK +++ K++++ D+ D ++ R + N
Sbjct: 186 ---KERRERKKERKKERRKKKER-KKDRKTDRQTDSQVFRPLRESAFNRVTVTGVFRYRI 241
Query: 170 IKAGLEHLP 178
GL+H P
Sbjct: 242 FHTGLDHFP 250
>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
Length = 2752
Score = 78.2 bits (191), Expect = 1e-14
Identities = 75/285 (26%), Positives = 121/285 (42%), Gaps = 11/285 (3%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSY 62
RRS R R + RR S S + +R SR + + RS+SRS +R RS S
Sbjct: 592 RRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARR-SGRSRSR 650
Query: 63 DRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSE 122
RR RS S + +R RSRSR + R RSRS++ RR RSR R RS
Sbjct: 651 TPARRGRSRSRTP----ARRGRSRSRTPAR--RSGRSRSRTPARRGRSRSRTPRRGRSRS 704
Query: 123 RSSHRRTRSRSRDRER--RKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPA 180
RS RR RS SR +R R G E++ K + + ++ + I + +
Sbjct: 705 RSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSS 764
Query: 181 EQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIEAIESDSF 240
++KA+ +L L + K++++ +R + + + + S
Sbjct: 765 PRSKAKSRLSLRRSLSGSSPC-PKQKSQTPPRRSRSGSSQPKAKSRTPPRRSRSSSSPPP 823
Query: 241 VQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKEIDP 285
Q++ S++ S P K + T ++ P + E+ + P
Sbjct: 824 KQKSKTPSRQSHSSSSP-HPKVKSGTPPRQGSITSPQANEQSVTP 867
Score = 77.8 bits (190), Expect = 1e-14
Identities = 87/302 (28%), Positives = 133/302 (44%), Gaps = 33/302 (10%)
Query: 1 MGR-RSSDTEEESRSKRKKKHRRRSSSSSSSD-SRTYSRKKGGR----KSRSKSRSWSRD 54
MGR RS T + RS+ + +R S S S R+ S ++ GR + R +SRS R
Sbjct: 481 MGRSRSPATAKRGRSRSRTPTKRGHSRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRP 540
Query: 55 LQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRT---RRSRSR 111
RS + RR R RS+ SR +R RSR R + +R RS+SRT RRSRSR
Sbjct: 541 GWSRSRNTQRRGRSRSARRGRSHSRSPATRGRSRSRTPA---RRGRSRSRTPARRRSRSR 597
Query: 112 PRLRSHSRSSERSSHRRTRSRSRDRERRKGRDK-------EKREKEKDKGKDKELHNIKR 164
R SRS R+ RR RSRSR RR+ R + R + G+ + +R
Sbjct: 598 TPTRRRSRS--RTPARRGRSRSRTPARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARR 655
Query: 165 GESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKE-RNEEEAKRRKEEDQATLV 223
G S PA + ++R + + ++ A+ R+ RR +LV
Sbjct: 656 GRS-------RSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLV 708
Query: 224 EQVKRVKEIEAIE----SDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPST 279
+ + S S + R+S+ +S E+K++ +S + +++ P S
Sbjct: 709 RRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSK 768
Query: 280 EK 281
K
Sbjct: 769 AK 770
Score = 74.3 bits (181), Expect = 1e-13
Identities = 94/341 (27%), Positives = 139/341 (40%), Gaps = 55/341 (16%)
Query: 5 SSDTEEESRSKRKKKHRRRSSSSSSS-------DSRTYSRKKGGRK-----SRSKSRS-- 50
+S + SRS+ + RRR S S SRT SR++ GR SR +SRS
Sbjct: 1797 TSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRSRT 1856
Query: 51 ----WSRD---LQPRSHSYDRRR-----RHRSSSSSSYGSRRKRSRSRS-----RGRGKS 93
W R P +H R R R RS S +S SRR RSRSR+ R R ++
Sbjct: 1857 SPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRR-RSRSRTSVTRRRSRSRA 1915
Query: 94 YRVQRSRSKSRT-----RRSRSR-PRLRSHSRS-SERSSHRRTRSRSRDRERRKGRDKEK 146
V R RS+SRT RRSRSR P R SRS + + RR+RSR+ RR+ R +
Sbjct: 1916 SPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTS 1975
Query: 147 REKEKDKGKDKELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKER 206
+ +R S P + ++R + +++ R
Sbjct: 1976 PITRRRSRSRTSPVTRRRSRS--------RTSPVTRRRSR------SRTSPVTRRRSRSR 2021
Query: 207 NEEEAKRRKEEDQATLVEQVKRVKEIEAIE--SDSFVQQTFRSSKEVKKSVEPSEVKQAT 264
+RR L + R + AI S S +T R + + +S + A+
Sbjct: 2022 TPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSAS 2081
Query: 265 STSGPASAVADPPSTEKEIDPTSIPTAIKYQDDNSLAHPNL 305
+S S A PP+T + P A+ + + P++
Sbjct: 2082 GSSSDRSRSATPPATRNHSGSRTPPVALNSSRMSCFSRPSM 2122
Score = 72.8 bits (177), Expect = 4e-13
Identities = 65/213 (30%), Positives = 93/213 (43%), Gaps = 31/213 (14%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSY 62
R S + E K + RRRS+SS + + + + K R RS SR + ++ +
Sbjct: 1726 RSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRT- 1784
Query: 63 DRRRRHRSSSSSSYGSRRKRSRSRS----RGRGKS-------YRVQRSRSKSRTRRSRSR 111
RRR RS SS S RR+RSRSRS R RG S R + SR+ SR RR RSR
Sbjct: 1785 -TRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSR 1843
Query: 112 PRLRSHSRSSERSS---------------HRRTRSRSRDRERRKGRDKE---KREKEKDK 153
S RS R+S HRR+RSR+ RR+ R + R + + +
Sbjct: 1844 TPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSR 1903
Query: 154 GKDKELHNIKRGESGNIKAGLEHLPPAEQAKAR 186
+ R + + PP + ++R
Sbjct: 1904 TSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSR 1936
Score = 66.6 bits (161), Expect = 3e-11
Identities = 66/210 (31%), Positives = 91/210 (43%), Gaps = 36/210 (17%)
Query: 5 SSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKS-------------RSKSRSW 51
SS TE K + RR S SS + +T SR R+S +SRS
Sbjct: 1652 SSSTESSPEHPPKSRTARRGSRSSP-EPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSA 1710
Query: 52 SRDLQPRSHSYDRRRRHRSSSS-----SSYGSRRKRSRSRSRGRGKSYR----------V 96
S + RS + R RR S SS S SRR+RS S R + S R +
Sbjct: 1711 SSSPETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGL 1770
Query: 97 QRSRSKSRTRRSRSRPRLRSHSRSSERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKD 156
QRSRS+SR ++R+ R R S SS+ +S RR RSRSR R R+ R ++
Sbjct: 1771 QRSRSRSRREKTRT-TRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQE 1829
Query: 157 KELHNIKRGESGNIKAGLEHLPPAEQAKAR 186
+ +R + G PP + ++R
Sbjct: 1830 SSRTSSRR------RRGRSRTPPTSRKRSR 1853
Score = 63.5 bits (153), Expect = 2e-10
Identities = 70/254 (27%), Positives = 101/254 (39%), Gaps = 33/254 (12%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRT--YSRKKGGRKSRSKSRSWSRDLQPRSH 60
RR S + E ++K + RRRSS SS +R SR+ S ++RS + RS
Sbjct: 1669 RRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSP 1728
Query: 61 SYD-----------RRRRHRSSSSSSYGSRRKRS---------RSRSRGRGKSYRVQRSR 100
S RRRR SS + SRR RS RSRSR R + R R R
Sbjct: 1729 SVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRR 1788
Query: 101 SKSRTRRSRSRPRLRSHSRSSERSSHRRT-----RSRSRDRERRKGRDKEKREKEKDKGK 155
+S + +S SR R RS SRS R + RR SRS R+ +R
Sbjct: 1789 DRSGSSQSTSRRRQRSRSRS--RVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPP 1846
Query: 156 DKELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVL----EAAAKADEALKAKERNEEEA 211
+ R K PA ++R + L + ++ + + R+
Sbjct: 1847 TSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSV 1906
Query: 212 KRRKEEDQATLVEQ 225
RR+ +A+ V +
Sbjct: 1907 TRRRSRSRASPVSR 1920
Score = 60.8 bits (146), Expect = 2e-09
Identities = 63/222 (28%), Positives = 95/222 (42%), Gaps = 24/222 (10%)
Query: 10 EESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRS---KSRSWSRDLQPRSHSYDRRR 66
E S S K + S S T SR+ G +S + + RS SR R HS R
Sbjct: 452 EISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSRSRSP 511
Query: 67 R-HRSSSSSSYG-SRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHS------ 118
+ RS S+ +G SR + R RSR + RSR+ R RSRS R RSHS
Sbjct: 512 QWRRSRSAQRWGRSRSPQRRGRSRSPQRP-GWSRSRNTQRRGRSRSARRGRSHSRSPATR 570
Query: 119 -RSSERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHL 177
RS R+ RR RSRSR RR+ R + + + + +RG S +
Sbjct: 571 GRSRSRTPARRGRSRSRTPARRRSRSRTPTRR-----RSRSRTPARRGRSRS------RT 619
Query: 178 PPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQ 219
P +++ R + + +++ + R+ A+R + +
Sbjct: 620 PARRRSRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSR 661
Score = 60.5 bits (145), Expect = 2e-09
Identities = 61/161 (37%), Positives = 82/161 (50%), Gaps = 20/161 (12%)
Query: 4 RSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGG---RKSRSKSRSWSRDLQPRSH 60
R+S T SRS+ RRRS S + +R SR + R+SRS++ +R + RS
Sbjct: 1903 RTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTPPVTRR-RSRSR 1961
Query: 61 SYDRRRRHRSSSSSSYGSRRKRSRS------RSRGRGKSYRVQRSRSKSRT-----RRSR 109
+ RR S +S RR RSR+ RSR R + V R RS+SRT RRSR
Sbjct: 1962 TPPVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSR--TSPVTRRRSRSRTSPVTRRRSR 2019
Query: 110 SR--PRLRSHSRS-SERSSHRRTRSRSRDRERRKGRDKEKR 147
SR P +R SRS + +R+RSRS RR+ R + R
Sbjct: 2020 SRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRTPR 2060
Score = 58.9 bits (141), Expect = 6e-09
Identities = 60/221 (27%), Positives = 87/221 (39%), Gaps = 19/221 (8%)
Query: 5 SSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDR 64
S + RS K + SSSS S + K R + S S P SH
Sbjct: 395 SEASPTRDRSPPKSPEKLPQSSSSESSPPSPQPTKVSRHASSSPESPKPAPAPGSH---- 450
Query: 65 RRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSR---PRLRSHSRSS 121
R SS +S S + R +S S R+ RSRS + +R RSR P R HSR S
Sbjct: 451 -REISSSPTSKNRSHGRAKRDKSHSHTPSRRMGRSRSPATAKRGRSRSRTPTKRGHSR-S 508
Query: 122 ERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEH-LPPA 180
RR+RS R R + + + + G + + +RG S + + G H PA
Sbjct: 509 RSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPA 568
Query: 181 EQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQAT 221
+ ++R A + + R+ A+RR T
Sbjct: 569 TRGRSR---------SRTPARRGRSRSRTPARRRSRSRTPT 600
Score = 58.9 bits (141), Expect = 6e-09
Identities = 65/293 (22%), Positives = 111/293 (37%), Gaps = 19/293 (6%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSY 62
R S + E +K R RS S SS D +T +R G++SRS S S++L + +
Sbjct: 1496 RSRSPSSPELNNKCLTPQRERSGSESSVDQKTVARTPLGQRSRSGS---SQELDVKPSAS 1552
Query: 63 DRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSE 122
+ R SS S R R RSR +SR R RS S P ++ R++
Sbjct: 1553 PQERSESDSSPDSKAKTRTPLRQRSRSGSSPEVDSKSRLSPRRSRSGSSPEVKDKPRAAP 1612
Query: 123 RSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPAEQ 182
R+ S + + R KG+ S + ++ EH P +
Sbjct: 1613 RAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEG-----SSSTESSPEHPPKSRT 1667
Query: 183 AKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKE--IEAIESDSF 240
A+ +++ K K R + + + T ++ R + E+ S
Sbjct: 1668 AR--------RGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSR 1719
Query: 241 VQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKEIDPTSIPTAIK 293
R S V S EP+E +++ AS+ ++ + P+ P ++
Sbjct: 1720 TPPRHRRSPSV-SSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQ 1771
Score = 57.4 bits (137), Expect = 2e-08
Identities = 75/301 (24%), Positives = 118/301 (39%), Gaps = 32/301 (10%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSY 62
R SS + + ++KKK ++ S S S RKK +K + +S S S+ + RS +
Sbjct: 175 RESSSSRSPTPKQKKKKKKKDRGRRSESSSPRRERKKSSKKKKHRSESESKKRKHRSPTP 234
Query: 63 DRRR------RHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRL-R 115
+R R RS S++ R+ RS S S RSRS+S ++ + R
Sbjct: 235 KSKRKSKDKKRKRSRSTTPAPKSRRAHRSTSADSASSSDTSRSRSRSAAAKTHTTALAGR 294
Query: 116 SHSRSSERS-------SHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESG 168
S S +S R S T S R K+ +DK KDK+ + R
Sbjct: 295 SPSPASGRRGEGDAPFSEPGTTSTQRPSSPETA-TKQPSSPYEDKDKDKKEKSATRPSPS 353
Query: 169 NIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKR 228
++ PPA L+ E + + L ++E E A+
Sbjct: 354 PERSSTGPEPPAP-----TPLLAERHGGSPQPLATTPLSQEPVNPPSE---ASPTRDRSP 405
Query: 229 VKEIEAIESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKEI--DPT 286
K E + S SS+ S +P++V + S+S + A P + +EI PT
Sbjct: 406 PKSPEKLPQSS-------SSESSPPSPQPTKVSRHASSSPESPKPAPAPGSHREISSSPT 458
Query: 287 S 287
S
Sbjct: 459 S 459
Score = 55.8 bits (133), Expect = 5e-08
Identities = 55/146 (37%), Positives = 68/146 (46%), Gaps = 23/146 (15%)
Query: 4 RSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYD 63
R+ T SRS+ RRRS S + +R SR + +R +SRS + +
Sbjct: 1938 RTPTTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITRRRSRSRTSPVT------- 1990
Query: 64 RRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRT-----RRSRSRPRLRSHS 118
RRR RS +S R+RSRSR+ V R RS+SRT RRSRSR L
Sbjct: 1991 -RRRSRSRTSPV---TRRRSRSRTS------PVTRRRSRSRTPPAIRRRSRSRTPLLPRK 2040
Query: 119 RSSERSSHRRTRSRSRDRERRKGRDK 144
RS RS R RSR R R R K
Sbjct: 2041 RSRSRSP-LAIRRRSRSRTPRTARGK 2065
Score = 51.6 bits (122), Expect = 1e-06
Identities = 56/168 (33%), Positives = 76/168 (45%), Gaps = 24/168 (14%)
Query: 6 SDTEEESRSKRKKKHRRRSSSSSSSDSR---------TYSRKKGGRKSRSKSRSWSRDLQ 56
SD+ E ++ + RRS S SSS R T S + KSR+ R +
Sbjct: 1618 SDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSSTESSPEHPPKSRTARRGSRSSPE 1677
Query: 57 PRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRS--RPRL 114
P++ S RR RSS SS +R+ R RSR S RSR+ R RRS S P
Sbjct: 1678 PKTKSRTPPRR-RSSRSSPELTRKARLSRRSRSASSSPET-RSRTPPRHRRSPSVSSPEP 1735
Query: 115 RSHSRSSER---SSHRRTRSRSR--------DRERRKGRDKEKREKEK 151
SRSS R +S RT++ SR R ++ R + +REK +
Sbjct: 1736 AEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTR 1783
Score = 48.9 bits (115), Expect = 6e-06
Identities = 49/181 (27%), Positives = 71/181 (39%), Gaps = 16/181 (8%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSY 62
R S + E + K + R +S S SS + + + + R+SRS S S R P S
Sbjct: 1595 RSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSSS 1654
Query: 63 DR------------RRRHRSS----SSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTR 106
RR RSS + S RR+ SRS K+ +RSRS S +
Sbjct: 1655 TESSPEHPPKSRTARRGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSP 1714
Query: 107 RSRSRPRLRSHSRSSERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGE 166
+RSR R S S +SRS R R + K + + + ++R
Sbjct: 1715 ETRSRTPPRHRRSPSVSSPEPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSR 1774
Query: 167 S 167
S
Sbjct: 1775 S 1775
Score = 47.4 bits (111), Expect = 2e-05
Identities = 49/137 (35%), Positives = 62/137 (45%), Gaps = 15/137 (10%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSY 62
R S T SRS+ RRRS S +S +R SR + +R +SRS R+
Sbjct: 1973 RTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRS-------RTPPA 2025
Query: 63 DRRRRHRSSSSSSYGSRRKRSRSRS----RGRGKSYRVQRSRSKSRTRRSRSRPRLRSHS 118
RRR S S + RKRSRSRS R R +S + +R K RS R RS S
Sbjct: 2026 IRRR----SRSRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLTRSPPAIRRRSAS 2081
Query: 119 RSSERSSHRRTRSRSRD 135
SS S T +R+
Sbjct: 2082 GSSSDRSRSATPPATRN 2098
Score = 46.6 bits (109), Expect = 3e-05
Identities = 57/233 (24%), Positives = 96/233 (41%), Gaps = 21/233 (9%)
Query: 61 SYDRRRRHRSSSSSS------YGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRL 114
S+D +RR R + + Y R+ S SRS + ++ + K R RRS S
Sbjct: 150 SFDPQRRAREAKQPAPEPPKPYSLVRESSSSRS---PTPKQKKKKKKKDRGRRSESSSPR 206
Query: 115 RSHSRSSERSSHRRTRSRSRDRERRKGRDKEKRE-KEKDKGKDKELHNIKRGESGNIKAG 173
R +SS++ H R+ S S+ R+ R K KR+ K+K + + + + +
Sbjct: 207 RERKKSSKKKKH-RSESESKKRKHRSPTPKSKRKSKDKKRKRSRSTTPAPKSRRAHRSTS 265
Query: 174 LEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVE----QVKRV 229
+ ++ +++R + AAAK A R+ A R+ E A E +R
Sbjct: 266 ADSASSSDTSRSRSR---SAAAKTHTTALA-GRSPSPASGRRGEGDAPFSEPGTTSTQRP 321
Query: 230 KEIE-AIESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEK 281
E A + S + K+ K + PS + +ST GP P E+
Sbjct: 322 SSPETATKQPSSPYEDKDKDKKEKSATRPSPSPERSST-GPEPPAPTPLLAER 373
Score = 46.6 bits (109), Expect = 3e-05
Identities = 48/150 (32%), Positives = 59/150 (39%), Gaps = 13/150 (8%)
Query: 4 RSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYD 63
R E + +KRK++ SSSSSSS S + S S S S S S S S
Sbjct: 2591 REGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSPS 2650
Query: 64 RRR-------RHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPR--- 113
+ + S G RR RS R S R RS S S R R P+
Sbjct: 2651 PAKPGPQALPKPASPKKPPPGERRSRS---PRKPIDSLRDSRSLSYSPVERRRPSPQPSP 2707
Query: 114 LRSHSRSSERSSHRRTRSRSRDRERRKGRD 143
S SSER S R R SR ++ R+
Sbjct: 2708 RDQQSSSSERGSRRGQRGDSRSPSHKRRRE 2737
Score = 43.1 bits (100), Expect = 3e-04
Identities = 42/145 (28%), Positives = 67/145 (46%), Gaps = 23/145 (15%)
Query: 2 GRRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKK---GGRKSRSKSR-SWSRDLQ- 56
GR S +E +++S+ ++ R +SS SR SR+ +S++KSR S R L
Sbjct: 722 GRSGSSSERKNKSRTSQRRSRSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSG 781
Query: 57 ----PRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRP 112
P+ S RR RS GS + +++SR+ R RS S ++ P
Sbjct: 782 SSPCPKQKSQTPPRRSRS------GSSQPKAKSRTPPRR-----SRSSSSPPPKQKSKTP 830
Query: 113 RLRSHSRSSERSSHRRTRSRSRDRE 137
+SHS S S H + +S + R+
Sbjct: 831 SRQSHSSS---SPHPKVKSGTPPRQ 852
Score = 38.1 bits (87), Expect = 0.011
Identities = 44/129 (34%), Positives = 54/129 (41%), Gaps = 26/129 (20%)
Query: 5 SSDTEEESRSKRKKKHRRRSSSSSSSDS----------RTYSRKK---GGRKSRSKSRSW 51
SS + S S SSSSSSS S + S KK G R+SRS +
Sbjct: 2623 SSSSSSSSSSSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPI 2682
Query: 52 SRDLQPRSHSY---DRRR-------RHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRS 101
RS SY +RRR R + SSSS GSRR + R R S++ +R
Sbjct: 2683 DSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQ---RGDSRSPSHKRRRETP 2739
Query: 102 KSRTRRSRS 110
R R RS
Sbjct: 2740 SPRPMRHRS 2748
Score = 37.4 bits (85), Expect = 0.019
Identities = 35/125 (28%), Positives = 44/125 (35%), Gaps = 22/125 (17%)
Query: 10 EESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPR----------- 58
+ ++ +R SSSSSSS S + S S S S S +QP
Sbjct: 2525 QPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTP 2584
Query: 59 -----------SHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRR 107
+R+ RSSSSSS S S S S S S S S +
Sbjct: 2585 APKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSS 2644
Query: 108 SRSRP 112
S S P
Sbjct: 2645 SSSSP 2649
Score = 37.0 bits (84), Expect = 0.025
Identities = 70/295 (23%), Positives = 105/295 (35%), Gaps = 40/295 (13%)
Query: 10 EESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRRHR 69
E S K+ RSS SSS+ + +K G S S D PR+ S R R
Sbjct: 1364 ETDPSLDMKEQSTRSSGHSSSELSPDAVEKAGMSSNQSISSPVLDAVPRTPS-----RER 1418
Query: 70 SSSSSS---------YGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRS 120
SSS+SS SRR RS S R S R + + PR S RS
Sbjct: 1419 SSSASSPEMKDGLPRTPSRRSRSGSSPGLRDGSGTPSRHSLSGSSPGMKDIPRTPSRGRS 1478
Query: 121 SERSS------HRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGL 174
SS + R RSR + +K + + G ES + +
Sbjct: 1479 ECDSSPEPKALPQTPRPRSRSPSSPELNNKCLTPQRERSG----------SESSVDQKTV 1528
Query: 175 EHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIEA 234
P +++++ L+ A +ER+E ++ + T + Q R
Sbjct: 1529 ARTPLGQRSRSGSSQELDVKPSA----SPQERSESDSSPDSKAKTRTPLRQRSRSGSSPE 1584
Query: 235 IESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKEIDPTSIP 289
++S S R S +S EVK + A + +D K P ++P
Sbjct: 1585 VDSKS------RLSPRRSRSGSSPEVKDKPRAAPRAQSGSDSSPEPKAPAPRALP 1633
Score = 36.2 bits (82), Expect = 0.042
Identities = 49/159 (30%), Positives = 66/159 (41%), Gaps = 24/159 (15%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSS---SSDSRTYSRKKGGRKS---RSKSRSWSRD-- 54
RRS + ++K + RR SSSS S+T SR+ S + KS + R
Sbjct: 795 RRSRSGSSQPKAKSRTPPRRSRSSSSPPPKQKSKTPSRQSHSSSSPHPKVKSGTPPRQGS 854
Query: 55 -LQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSR-- 111
P+++ + RS SS K SR+ SR R +S + R+S SR
Sbjct: 855 ITSPQANEQSVTPQRRSCFESSPDPELK-SRTPSRHSCSGSSPPRVKSSTPPRQSPSRSS 913
Query: 112 -----------PRLRSHSRSSERSSHRRTRSRSRDRERR 139
PR RSHS SS S R T SR+ R R
Sbjct: 914 SPQPKVKAIISPRQRSHSGSSSPSPSRVT-SRTTPRRSR 951
Score = 30.4 bits (67), Expect = 2.3
Identities = 47/207 (22%), Positives = 71/207 (34%), Gaps = 46/207 (22%)
Query: 5 SSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWS------------ 52
S+ ++ S + + R SSSSSS S + S S S S S
Sbjct: 2512 STGAQQPSALAALQPAKERRSSSSSSSSSSSSSSSSSSSSSSSSSGSSSSDSEGSSLPVQ 2571
Query: 53 -------------------RDLQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKS 93
R+ +P + +R+R SSSSSS S S S S S
Sbjct: 2572 PEVALKRVPSPTPAPKEAVREGRPPEPTPAKRKRRSSSSSSSSSSSSSSSSSSSSSSSSS 2631
Query: 94 YRVQRSRSKSRTRRSRS------RPRLRSHSRSSERSSHRRTRSRSRDRERRKGRD---- 143
S S S + S S P+ S ++ RSRS + RD
Sbjct: 2632 SSSSSSSSSSSSSSSSSPSPAKPGPQALPKPASPKKPPPGERRSRSPRKPIDSLRDSRSL 2691
Query: 144 -----KEKREKEKDKGKDKELHNIKRG 165
+ +R + +D++ + +RG
Sbjct: 2692 SYSPVERRRPSPQPSPRDQQSSSSERG 2718
Score = 29.6 bits (65), Expect = 3.9
Identities = 26/74 (35%), Positives = 37/74 (50%), Gaps = 4/74 (5%)
Query: 3 RRSSDTEEESRSKRKK--KHRRRSSSSSSSDSRTYSRKKGGRKS-RSKSRSWSRDLQPRS 59
R+ D+ +SRS + RR S S D ++ S ++G R+ R SRS S + +
Sbjct: 2679 RKPIDSLRDSRSLSYSPVERRRPSPQPSPRDQQSSSSERGSRRGQRGDSRSPSHKRRRET 2738
Query: 60 HSYDRRRRHRSSSS 73
S R RHRSS S
Sbjct: 2739 PS-PRPMRHRSSRS 2751
>gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo
sapiens]
Length = 820
Score = 77.8 bits (190), Expect = 1e-14
Identities = 66/222 (29%), Positives = 103/222 (46%), Gaps = 18/222 (8%)
Query: 45 RSKSRSWSRDLQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSR 104
+ + S S++ + RS + DR R SS RKR RSR R RG S RSRS+SR
Sbjct: 9 KDRDASPSKEERKRSRTPDRERDRDRDRKSSPSKDRKRHRSRDRRRGGS----RSRSRSR 64
Query: 105 TRRSRSRPRLRSHSRSSERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKR 164
++ + R + R ER +++ R R +D R RDK+++ G+ K+ + K
Sbjct: 65 SKSAERERRHKERERDKERDRNKKDRDRDKDGHR---RDKDRKRSSLSPGRGKDFKSRKD 121
Query: 165 GESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAK-------ERNEEEAKRRK-- 215
+S + EH +A+ L A KA+E +AK ER E KRR+
Sbjct: 122 RDSKKDEED-EHGDKKPKAQPLSLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQE 180
Query: 216 -EEDQATLVEQVKRVKEIEAIESDSFVQQTFRSSKEVKKSVE 256
EE Q L E+ K+ K+ + + R +E ++ +E
Sbjct: 181 VEERQRMLEEERKKRKQFQDLGRKMLEDPQERERRERRERME 222
Score = 67.0 bits (162), Expect = 2e-11
Identities = 59/203 (29%), Positives = 96/203 (47%), Gaps = 28/203 (13%)
Query: 18 KKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRRHRSSSSSSYG 77
K+ R+RS + R RK K R + RS R R R S S
Sbjct: 17 KEERKRSRTPDRERDRDRDRKSSPSKDRKRHRS--------------RDRRRGGSRS--- 59
Query: 78 SRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLR-SHSRSSERSSHRRTRSRSRDR 136
R RSRS+S R + ++ +R R K R R + R R + H R +R + R +D
Sbjct: 60 --RSRSRSKSAERERRHK-ERERDKERDRNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDF 116
Query: 137 ERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAK 196
+ RK RD +K E+D+ DK+ + + +++ L E+A+A+ + + +A +
Sbjct: 117 KSRKDRDSKK--DEEDEHGDKK----PKAQPLSLEELLAKKKAEEEAEAKPKFLSKAERE 170
Query: 197 ADEALKAKERNEEEAKRRKEEDQ 219
A EALK +++ EE +R EE++
Sbjct: 171 A-EALKRRQQEVEERQRMLEEER 192
Score = 49.3 bits (116), Expect = 5e-06
Identities = 40/177 (22%), Positives = 69/177 (38%), Gaps = 10/177 (5%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSY 62
R D + + R+ K R+RSS S SRK R S+ D +P++
Sbjct: 85 RNKKDRDRDKDGHRRDKDRKRSSLSPGRGKDFKSRK--DRDSKKDEEDEHGDKKPKAQPL 142
Query: 63 D-------RRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLR 115
++ + + + S+ +R + R + ++ + ++ + L
Sbjct: 143 SLEELLAKKKAEEEAEAKPKFLSKAEREAEALKRRQQEVEERQRMLEEERKKRKQFQDLG 202
Query: 116 SHSRSSERSSHRRTRSRSRDRERRKGRDKEKREK-EKDKGKDKELHNIKRGESGNIK 171
+ RR R +RE D+E R+K ++K K KELH IK G IK
Sbjct: 203 RKMLEDPQERERRERRERMERETNGNEDEEGRQKIREEKDKSKELHAIKERYLGGIK 259
>gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]
Length = 951
Score = 77.4 bits (189), Expect = 2e-14
Identities = 58/162 (35%), Positives = 83/162 (51%), Gaps = 25/162 (15%)
Query: 10 EESRSKRKKKHRRRS---------SSSSSSDSRTYSRKK----GGRKSRSKSRSWSRDLQ 56
EE + K+KKKH++RS SSS S SR++S+ K ++ +SRS SR +
Sbjct: 751 EEEKEKKKKKHKKRSRTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTVRRSRSRSRSPR 810
Query: 57 PRSHSYDRRRRHRS-----SSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSR 111
R+HS +RRR RS S S G+ RKR+RSRS K R RSR+KS+ R
Sbjct: 811 RRAHSPERRREERSVPTAYRVSRSPGASRKRTRSRSPHEKKKKRRSRSRTKSKARSQSVS 870
Query: 112 PRLRSHSRSSERSSHRR-------TRSRSRDRERRKGRDKEK 146
P ++ R + ++H SR +ER +G +EK
Sbjct: 871 PSKQAAPRPAAPAAHSAHSASVSPVESRGSSQERSRGVSQEK 912
Score = 60.5 bits (145), Expect = 2e-09
Identities = 47/133 (35%), Positives = 64/133 (48%), Gaps = 5/133 (3%)
Query: 23 RSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRRHRSSSSSSYGSRRKR 82
R SS S R ++K +K + +SR+ SR + S S R R H + S + R
Sbjct: 740 RPSSKSKDPPREEEKEKKKKKHKKRSRTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTV 799
Query: 83 SRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSERSSHRRTRSRSRDRERRKGR 142
RSRSR R +R+ S R R RS P SR S +S +RTRSRS E++K R
Sbjct: 800 RRSRSRSRSPR---RRAHSPERRREERSVPTAYRVSR-SPGASRKRTRSRS-PHEKKKKR 854
Query: 143 DKEKREKEKDKGK 155
R K K + +
Sbjct: 855 RSRSRTKSKARSQ 867
Score = 58.9 bits (141), Expect = 6e-09
Identities = 56/199 (28%), Positives = 91/199 (45%), Gaps = 24/199 (12%)
Query: 44 SRSKSRSWSRDLQPRSHSYDRRRRHRSSSSSSYGSRRKRSRSRSRGR---GKSYR-VQRS 99
S+SK + + + + +R R RS S + S + RSRS S+ + +YR V+RS
Sbjct: 743 SKSKDPPREEEKEKKKKKHKKRSRTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTVRRS 802
Query: 100 RSKSRTRRSRSRPRLRSHSRSSERSSHRRTRSRSRDRERRKGRD-KEKREKEKDKGKDKE 158
RS+SR+ R R+ R S +++R +RS R+R + R EK++K + + + K
Sbjct: 803 RSRSRSPRRRAHSPERRREERSVPTAYRVSRSPGASRKRTRSRSPHEKKKKRRSRSRTKS 862
Query: 159 LHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEED 218
KA + + P++QA R AA A A A E R ++
Sbjct: 863 ------------KARSQSVSPSKQAAPR-----PAAPAAHSAHSASVSPVE--SRGSSQE 903
Query: 219 QATLVEQVKRVKEIEAIES 237
++ V Q K + AI S
Sbjct: 904 RSRGVSQEKEAQISSAIVS 922
Score = 41.6 bits (96), Expect = 0.001
Identities = 28/133 (21%), Positives = 56/133 (42%), Gaps = 5/133 (3%)
Query: 78 SRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSERSSHR-----RTRSR 132
S + + R + K + + RS++R+R + +S SRS ++ H RT R
Sbjct: 742 SSKSKDPPREEEKEKKKKKHKKRSRTRSRSPKYHSSSKSRSRSHSKAKHSLPSAYRTVRR 801
Query: 133 SRDRERRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLE 192
SR R R R E+ +++ + + R + K P ++ K R + +
Sbjct: 802 SRSRSRSPRRRAHSPERRREERSVPTAYRVSRSPGASRKRTRSRSPHEKKKKRRSRSRTK 861
Query: 193 AAAKADEALKAKE 205
+ A++ +K+
Sbjct: 862 SKARSQSVSPSKQ 874
Score = 40.8 bits (94), Expect = 0.002
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 31/144 (21%)
Query: 3 RRSSDTEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSY 62
RRS R + RRR S + R SR G + R++SRS P
Sbjct: 800 RRSRSRSRSPRRRAHSPERRREERSVPTAYRV-SRSPGASRKRTRSRS------PH---- 848
Query: 63 DRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRL-RSHSRSS 121
++K+ RSRSR + K+ RS+S S ++++ RP +HS S
Sbjct: 849 ---------------EKKKKRRSRSRTKSKA----RSQSVSPSKQAAPRPAAPAAHSAHS 889
Query: 122 ERSSHRRTRSRSRDRERRKGRDKE 145
S +R S++R R ++KE
Sbjct: 890 ASVSPVESRGSSQERSRGVSQEKE 913
Score = 35.4 bits (80), Expect = 0.072
Identities = 29/107 (27%), Positives = 52/107 (48%), Gaps = 4/107 (3%)
Query: 180 AEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKR-VKEIEA--IE 236
A+QAK +L+ L AAA+ A +KE E++ + ++ A ++ +K + E EA IE
Sbjct: 648 AKQAKQKLEDRLAAAAREKLAQASKESKEKQLQAERKRKAALFLQTLKNPLPEAEAGKIE 707
Query: 237 SDSF-VQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVADPPSTEKE 282
F V+++ + + P + P+S DPP E++
Sbjct: 708 ESPFSVEESSTTPCPLLTGGRPLPTLEVKPPDRPSSKSKDPPREEEK 754
>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
Length = 1312
Score = 76.6 bits (187), Expect = 3e-14
Identities = 53/150 (35%), Positives = 73/150 (48%), Gaps = 3/150 (2%)
Query: 8 TEEESRSKRKKKHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRR 67
T ++SR +RK+ + ++SSSS ++ K RS RD +P SH+ RR
Sbjct: 515 TRKKSRRERKRSGEAKEAASSSSGTQPAPPAPASPWDSKKHRS--RDRKPGSHASSSARR 572
Query: 68 HRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSERSSHR 127
RS S S S R+RSRS R RG S R + + R RRS S P S S SS R HR
Sbjct: 573 -RSRSRSRSRSTRRRSRSTDRRRGGSRRSRSREKRRRRRRSASPPPATSSSSSSRRERHR 631
Query: 128 RTRSRSRDRERRKGRDKEKREKEKDKGKDK 157
+++K R + + EK G +K
Sbjct: 632 GKHRDGGGSKKKKKRSRSRGEKRSGDGSEK 661
Score = 58.2 bits (139), Expect = 1e-08
Identities = 72/277 (25%), Positives = 116/277 (41%), Gaps = 36/277 (12%)
Query: 4 RSSDTEEESRSKRKKKHRRRSSSSSSSD---SRTYSRKKGG-RKSRSKSRSWSRDLQPRS 59
RS D + S + + R RS S S S SR+ R++GG R+SRS+ +
Sbjct: 556 RSRDRKPGSHASSSARRRSRSRSRSRSTRRRSRSTDRRRGGSRRSRSREK---------- 605
Query: 60 HSYDRRRRHRSSS-----SSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRL 114
RRRR RS+S SSS SRR+R R + R G SK + +RSRSR
Sbjct: 606 ----RRRRRRSASPPPATSSSSSSRRERHRGKHRDGG--------GSKKKKKRSRSRGEK 653
Query: 115 RSHSRSSERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGKDKELHNIKRGES-GNI-KA 172
RS S + + S S R R + D +L IKR + G + K+
Sbjct: 654 RSGDGSEKAPAPAPPPSGSTSCGDRDSRRRGAVPPSIQDLTDHDLFAIKRTITVGRLDKS 713
Query: 173 GLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEI 232
PA + + +++ ++ + E K ++ + ++ E+ R K +
Sbjct: 714 DPRGPSPAPASSPKREVLYDSEGLSGEERGGKSSQKDRRRSGAASSSSSSREKGSRRKAL 773
Query: 233 EAIESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGP 269
+ + D + + KK+ P K++ +SGP
Sbjct: 774 DGGDRDRDRDRDRDRDRSSKKARPP---KESAPSSGP 807
Score = 42.4 bits (98), Expect = 6e-04
Identities = 57/216 (26%), Positives = 81/216 (37%), Gaps = 62/216 (28%)
Query: 3 RRSSDTEEE------SRSKRKKKHRRRSSS------SSSSDSRTYSRKK---GGRKSRSK 47
RRS T+ SRS+ K++ RRRS+S SSSS R R K GG + K
Sbjct: 585 RRSRSTDRRRGGSRRSRSREKRRRRRRSASPPPATSSSSSSRRERHRGKHRDGGGSKKKK 644
Query: 48 SRSWSRDLQPRSHSYDRRRRHRS--SSSSSYGSRRKRSRS-------------------- 85
RS SR + ++ S S+S G R R R
Sbjct: 645 KRSRSRGEKRSGDGSEKAPAPAPPPSGSTSCGDRDSRRRGAVPPSIQDLTDHDLFAIKRT 704
Query: 86 -------RSRGRGKS------------YRVQRSRSKSRTRRSRSRPRLRSHSRSSERSSH 126
+S RG S Y + + R +S + R RS + SS SS
Sbjct: 705 ITVGRLDKSDPRGPSPAPASSPKREVLYDSEGLSGEERGGKSSQKDRRRSGAASSSSSSR 764
Query: 127 RRTRSRS------RDRERRKGRDKEKREKEKDKGKD 156
+ R RDR+R + RD+++ K+ K+
Sbjct: 765 EKGSRRKALDGGDRDRDRDRDRDRDRSSKKARPPKE 800
Score = 38.5 bits (88), Expect = 0.008
Identities = 74/307 (24%), Positives = 108/307 (35%), Gaps = 47/307 (15%)
Query: 10 EESRSKRKKKHRRRS-SSSSSSDSRTY-SRKK---GGRKSRSKSRSWSRDLQPRSHSYDR 64
EE K +K RRRS ++SSSS SR SR+K GG + R + R RD + +
Sbjct: 740 EERGGKSSQKDRRRSGAASSSSSSREKGSRRKALDGGDRDRDRDRDRDRDRSSKKARPPK 799
Query: 65 RR---------------RHRSSSSSSYGSRRKRSRSR-----SRGRGKSYRVQRSRSK-- 102
SSSSSS SR+ + +S+ G + + + S
Sbjct: 800 ESAPSSGPPPKPPVSSGSGSSSSSSSCSSRKVKLQSKVAVLIREGVSSTTPAKDAASAGL 859
Query: 103 -------SRTRRSRSRPRLRSHSRSSERSSHRRTRSRSRDRERRKGRDKEKREKEKDKGK 155
SR R SRS P L+ R+ + S + + K + K+ K KGK
Sbjct: 860 GSIGVKFSRDRESRS-PFLKPDERAPTEMAKAAPGSTKPKKTKVKAKAGAKKTK-GTKGK 917
Query: 156 DKELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEAKRRK 215
K K+ SG G + ++ L A +A K E +
Sbjct: 918 TKPSKTRKKVRSGGGSGG---------SGGQVSLKKSKADSCSQAAGTKGAEETSWSGEE 968
Query: 216 EEDQATLVEQVKRVKEIEAIESDSFVQQTFRSSKEVKKSVEPSEVKQATSTSGPASAVAD 275
+ K A+ DS Q S K + S P E + G A +
Sbjct: 969 RAAKVPSTPPPKAAPPPPALTPDS--QTVDSSCKTPEVSFLPEEATEEAGVRGGAEEEEE 1026
Query: 276 PPSTEKE 282
E+E
Sbjct: 1027 EEEEEEE 1033
Score = 30.4 bits (67), Expect = 2.3
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 193 AAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRVKE-IEAIESDSFVQQTFRSSKEV 251
A + E + +E EEE + +EE++ L + + R+ E + I D+ + Q F +
Sbjct: 262 AGTPSPEEEEEEEEEEEEEEEDEEEEEG-LSQSISRISETLAGIYDDNSLSQDFPGDESP 320
Query: 252 KKSVEPSEVKQATST 266
+ +P++ A T
Sbjct: 321 RPDAQPTQPTPAPGT 335
>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
Length = 2426
Score = 76.3 bits (186), Expect = 4e-14
Identities = 53/154 (34%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 7 DTEEESRSKRKK----KHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSY 62
DT E+S+ + + K ++R SS S R+ S + RK S+SRS +R +S S+
Sbjct: 1798 DTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSH 1857
Query: 63 DRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSE 122
+ R RS S RR+ SRSRS+ RG+ + R +S RS+SR R R RSS
Sbjct: 1858 RSQTRSRSRSRR----RRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKR--KRSSS 1911
Query: 123 RSSHRRTRSRSRDRERR-KGRDKEKREKEKDKGK 155
R + + R+RSR RR + +R + + G+
Sbjct: 1912 RDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGR 1945
Score = 74.3 bits (181), Expect = 1e-13
Identities = 79/252 (31%), Positives = 110/252 (43%), Gaps = 14/252 (5%)
Query: 3 RRSSDTEEESRSKRK-KKHRRRSSSSSSSDSRTYSRKKGGRKSRSKS---RSWSRDLQPR 58
RRSS + +SR +R K +R+ S S SR RK+ + K+ RS + + R
Sbjct: 1871 RRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSR 1930
Query: 59 SHSYDRRRRHRS-------SSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSR 111
SH+ RRRR RS S S S SR RSR+ R +RSR+ SR R+ SR
Sbjct: 1931 SHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSR 1990
Query: 112 PRLRSHSRSSERSSHRRTRSRSRDRER-RKGRDKEKREKEKDKGKDKELHNIKRGESGNI 170
R R+ SR S R RS S R R+ R +R + + K + +RG S
Sbjct: 1991 -RSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRSPKR 2049
Query: 171 KAGLEHLPPAEQAKAR-LQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRV 229
L+ E AKA + +A LK E K K+ AT+ E ++
Sbjct: 2050 LTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEELTEKC 2109
Query: 230 KEIEAIESDSFV 241
K+I + D V
Sbjct: 2110 KQIAQSKEDDDV 2121
Score = 70.9 bits (172), Expect = 2e-12
Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 12/142 (8%)
Query: 24 SSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRRHRSSSSSSYGSRRKRS 83
SSS D + + K + K+++ + + + R R + S SS + SR++ S
Sbjct: 1782 SSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTS 1841
Query: 84 RSRSRGR-----GKSYRVQ-RSRSKSRTRRSRSRPRLRSHSRSS------ERSSHRRTRS 131
SRSR R KS+R Q RSRS+SR RR SR R +S R S +RS R++S
Sbjct: 1842 ESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKS 1901
Query: 132 RSRDRERRKGRDKEKREKEKDK 153
R R R+R RD K + + +
Sbjct: 1902 RERKRKRSSSRDNRKTVRARSR 1923
Score = 69.7 bits (169), Expect = 3e-12
Identities = 72/254 (28%), Positives = 106/254 (41%), Gaps = 30/254 (11%)
Query: 2 GRRSSDTEEESRSKRKK------KHRRRSSSSSSSDSRTYSRKKGGR---KSRSKSRSWS 52
G + + RS+ K+ K R+R+S S S + S+ K R +SRS+SR
Sbjct: 1812 GEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRR 1871
Query: 53 RDLQPRSHSYDRR-----RRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQ--------RS 99
R + RS S RR +R RS S RKR RS SR K+ R + RS
Sbjct: 1872 RSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRS 1931
Query: 100 RSKSRTRRSRSRPRLRSHSRSSERSSH---RRTRSRSRDRERRKGRDKEKREKEKDKGKD 156
+ SR RRSRS R RS S S R S RR+R+ SR R + + + +
Sbjct: 1932 HTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR 1991
Query: 157 KELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEA---KR 213
+ +R ++ + P ++R L + + R+ E KR
Sbjct: 1992 SRTPSRRRRSRSVVRRRSFSISPVRLRRSRTP--LRRRFSRSPIRRKRSRSSERGRSPKR 2049
Query: 214 RKEEDQATLVEQVK 227
+ D+A L+E K
Sbjct: 2050 LTDLDKAQLLEIAK 2063
Score = 52.0 bits (123), Expect = 7e-07
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 79 RRKRSRSRSRG-----RGKSYRVQRSRSKSRTRRSRSR---PRLRSHSRSSERSSHR-RT 129
+ K++++R +G R S R + RSKS +SR R R R+ RSS+ SHR +T
Sbjct: 1802 KSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQT 1861
Query: 130 RSRSRDRERR-----KGRDKEKREKEKDKGKDKELHNIKRGE 166
RSRSR R RR + + + +R K+K K H K E
Sbjct: 1862 RSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRE 1903
Score = 35.8 bits (81), Expect = 0.055
Identities = 38/192 (19%), Positives = 78/192 (40%), Gaps = 33/192 (17%)
Query: 78 SRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSERSSHRRTRSRSRDRE 137
+ K ++++R +G+ + + S +SR++RS+S +S R+SE +RSR+R
Sbjct: 1799 THEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEH-KSRKRTSE------SRSRAR--- 1848
Query: 138 RRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKA 197
+R + K R + + + + + R S +++ R + +K
Sbjct: 1849 KRSSKSKSHRSQTRSRSRSRRRRRSSRSRS--------------KSRGR-----RSVSKE 1889
Query: 198 DEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIEAIESDSFVQQTFRSSKEVKK---- 253
K R++ ++RK + V+ + S S R S+ V +
Sbjct: 1890 KRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSF 1949
Query: 254 SVEPSEVKQATS 265
S+ PS + S
Sbjct: 1950 SISPSRRSRTPS 1961
>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
Length = 2303
Score = 76.3 bits (186), Expect = 4e-14
Identities = 53/154 (34%), Positives = 80/154 (51%), Gaps = 11/154 (7%)
Query: 7 DTEEESRSKRKK----KHRRRSSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSY 62
DT E+S+ + + K ++R SS S R+ S + RK S+SRS +R +S S+
Sbjct: 1798 DTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSH 1857
Query: 63 DRRRRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSE 122
+ R RS S RR+ SRSRS+ RG+ + R +S RS+SR R R RSS
Sbjct: 1858 RSQTRSRSRSRR----RRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKR--KRSSS 1911
Query: 123 RSSHRRTRSRSRDRERR-KGRDKEKREKEKDKGK 155
R + + R+RSR RR + +R + + G+
Sbjct: 1912 RDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGR 1945
Score = 74.3 bits (181), Expect = 1e-13
Identities = 79/252 (31%), Positives = 110/252 (43%), Gaps = 14/252 (5%)
Query: 3 RRSSDTEEESRSKRK-KKHRRRSSSSSSSDSRTYSRKKGGRKSRSKS---RSWSRDLQPR 58
RRSS + +SR +R K +R+ S S SR RK+ + K+ RS + + R
Sbjct: 1871 RRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSR 1930
Query: 59 SHSYDRRRRHRS-------SSSSSYGSRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSR 111
SH+ RRRR RS S S S SR RSR+ R +RSR+ SR R+ SR
Sbjct: 1931 SHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSR 1990
Query: 112 PRLRSHSRSSERSSHRRTRSRSRDRER-RKGRDKEKREKEKDKGKDKELHNIKRGESGNI 170
R R+ SR S R RS S R R+ R +R + + K + +RG S
Sbjct: 1991 -RSRTPSRRRRSRSVVRRRSFSISPVRLRRSRTPLRRRFSRSPIRRKRSRSSERGRSPKR 2049
Query: 171 KAGLEHLPPAEQAKAR-LQLVLEAAAKADEALKAKERNEEEAKRRKEEDQATLVEQVKRV 229
L+ E AKA + +A LK E K K+ AT+ E ++
Sbjct: 2050 LTDLDKAQLLEIAKANAAAMCAKAGVPLPPNLKPAPPPTIEEKVAKKSGGATIEELTEKC 2109
Query: 230 KEIEAIESDSFV 241
K+I + D V
Sbjct: 2110 KQIAQSKEDDDV 2121
Score = 70.9 bits (172), Expect = 2e-12
Identities = 48/142 (33%), Positives = 71/142 (50%), Gaps = 12/142 (8%)
Query: 24 SSSSSSSDSRTYSRKKGGRKSRSKSRSWSRDLQPRSHSYDRRRRHRSSSSSSYGSRRKRS 83
SSS D + + K + K+++ + + + R R + S SS + SR++ S
Sbjct: 1782 SSSEEKDDYEIFVKVKDTHEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTS 1841
Query: 84 RSRSRGR-----GKSYRVQ-RSRSKSRTRRSRSRPRLRSHSRSS------ERSSHRRTRS 131
SRSR R KS+R Q RSRS+SR RR SR R +S R S +RS R++S
Sbjct: 1842 ESRSRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKS 1901
Query: 132 RSRDRERRKGRDKEKREKEKDK 153
R R R+R RD K + + +
Sbjct: 1902 RERKRKRSSSRDNRKTVRARSR 1923
Score = 69.7 bits (169), Expect = 3e-12
Identities = 72/254 (28%), Positives = 106/254 (41%), Gaps = 30/254 (11%)
Query: 2 GRRSSDTEEESRSKRKK------KHRRRSSSSSSSDSRTYSRKKGGR---KSRSKSRSWS 52
G + + RS+ K+ K R+R+S S S + S+ K R +SRS+SR
Sbjct: 1812 GEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQTRSRSRSRRRR 1871
Query: 53 RDLQPRSHSYDRR-----RRHRSSSSSSYGSRRKRSRSRSRGRGKSYRVQ--------RS 99
R + RS S RR +R RS S RKR RS SR K+ R + RS
Sbjct: 1872 RSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRS 1931
Query: 100 RSKSRTRRSRSRPRLRSHSRSSERSSH---RRTRSRSRDRERRKGRDKEKREKEKDKGKD 156
+ SR RRSRS R RS S S R S RR+R+ SR R + + + +
Sbjct: 1932 HTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR 1991
Query: 157 KELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKADEALKAKERNEEEA---KR 213
+ +R ++ + P ++R L + + R+ E KR
Sbjct: 1992 SRTPSRRRRSRSVVRRRSFSISPVRLRRSRTP--LRRRFSRSPIRRKRSRSSERGRSPKR 2049
Query: 214 RKEEDQATLVEQVK 227
+ D+A L+E K
Sbjct: 2050 LTDLDKAQLLEIAK 2063
Score = 52.0 bits (123), Expect = 7e-07
Identities = 37/102 (36%), Positives = 53/102 (51%), Gaps = 14/102 (13%)
Query: 79 RRKRSRSRSRG-----RGKSYRVQRSRSKSRTRRSRSR---PRLRSHSRSSERSSHR-RT 129
+ K++++R +G R S R + RSKS +SR R R R+ RSS+ SHR +T
Sbjct: 1802 KSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEHKSRKRTSESRSRARKRSSKSKSHRSQT 1861
Query: 130 RSRSRDRERR-----KGRDKEKREKEKDKGKDKELHNIKRGE 166
RSRSR R RR + + + +R K+K K H K E
Sbjct: 1862 RSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRE 1903
Score = 35.8 bits (81), Expect = 0.055
Identities = 38/192 (19%), Positives = 78/192 (40%), Gaps = 33/192 (17%)
Query: 78 SRRKRSRSRSRGRGKSYRVQRSRSKSRTRRSRSRPRLRSHSRSSERSSHRRTRSRSRDRE 137
+ K ++++R +G+ + + S +SR++RS+S +S R+SE +RSR+R
Sbjct: 1799 THEKSKKNKNRDKGEKEKKRDSSLRSRSKRSKSSEH-KSRKRTSE------SRSRAR--- 1848
Query: 138 RRKGRDKEKREKEKDKGKDKELHNIKRGESGNIKAGLEHLPPAEQAKARLQLVLEAAAKA 197
+R + K R + + + + + R S +++ R + +K
Sbjct: 1849 KRSSKSKSHRSQTRSRSRSRRRRRSSRSRS--------------KSRGR-----RSVSKE 1889
Query: 198 DEALKAKERNEEEAKRRKEEDQATLVEQVKRVKEIEAIESDSFVQQTFRSSKEVKK---- 253
K R++ ++RK + V+ + S S R S+ V +
Sbjct: 1890 KRKRSPKHRSKSRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSF 1949
Query: 254 SVEPSEVKQATS 265
S+ PS + S
Sbjct: 1950 SISPSRRSRTPS 1961
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.306 0.120 0.314
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,355,001
Number of Sequences: 37866
Number of extensions: 588134
Number of successful extensions: 23696
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 583
Number of HSP's successfully gapped in prelim test: 823
Number of HSP's that attempted gapping in prelim test: 6411
Number of HSP's gapped (non-prelim): 6690
length of query: 334
length of database: 18,247,518
effective HSP length: 103
effective length of query: 231
effective length of database: 14,347,320
effective search space: 3314230920
effective search space used: 3314230920
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.