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Search of human proteins with 12408677
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|12408677 prefoldin subunit 4 [Homo sapiens]
(134 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|12408677 prefoldin subunit 4 [Homo sapiens] 259 3e-70
gi|205277396 dynactin 1 isoform 4 [Homo sapiens] 40 4e-04
gi|205277392 dynactin 1 isoform 3 [Homo sapiens] 40 4e-04
gi|13259508 dynactin 1 isoform 2 [Homo sapiens] 40 4e-04
gi|13259510 dynactin 1 isoform 1 [Homo sapiens] 40 4e-04
gi|38044112 restin isoform b [Homo sapiens] 40 4e-04
gi|4506751 restin isoform a [Homo sapiens] 40 4e-04
gi|5730075 fibrinogen-like 2 precursor [Homo sapiens] 39 0.001
gi|96975038 coiled-coil domain containing 100 [Homo sapiens] 37 0.005
gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens] 36 0.008
gi|156104908 myosin heavy chain 6 [Homo sapiens] 36 0.011
gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo sapi... 35 0.014
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 35 0.014
gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta ... 35 0.014
gi|109715852 chromosome 6 open reading frame 204 isoform a [Homo... 35 0.014
gi|18079254 p53 and DNA damage-regulated protein [Homo sapiens] 35 0.018
gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo... 35 0.018
gi|34577114 cytomatrix protein p110 [Homo sapiens] 35 0.018
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 35 0.024
gi|15618995 keratin 71 [Homo sapiens] 35 0.024
gi|237858621 polyamine modulated factor 1 binding protein 1 isof... 35 0.024
gi|237858619 polyamine modulated factor 1 binding protein 1 isof... 35 0.024
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 35 0.024
gi|119395750 keratin 1 [Homo sapiens] 34 0.031
gi|112420968 coiled-coil domain containing 158 [Homo sapiens] 34 0.031
gi|31982906 cingulin-like 1 [Homo sapiens] 34 0.031
gi|56961680 coiled-coil domain containing 147 [Homo sapiens] 34 0.031
gi|42794779 myosin 18A isoform b [Homo sapiens] 34 0.040
gi|28416946 myosin 18A isoform a [Homo sapiens] 34 0.040
gi|239754018 PREDICTED: hypothetical protein LOC100129791 [Homo ... 33 0.052
>gi|12408677 prefoldin subunit 4 [Homo sapiens]
Length = 134
Score = 259 bits (663), Expect = 3e-70
Identities = 134/134 (100%), Positives = 134/134 (100%)
Query: 1 MAATMKKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLA 60
MAATMKKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLA
Sbjct: 1 MAATMKKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLA 60
Query: 61 DDDCLMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLY 120
DDDCLMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLY
Sbjct: 61 DDDCLMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLY 120
Query: 121 AKFGSNINLEADES 134
AKFGSNINLEADES
Sbjct: 121 AKFGSNINLEADES 134
>gi|205277396 dynactin 1 isoform 4 [Homo sapiens]
Length = 1139
Score = 40.4 bits (93), Expect = 4e-04
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 20/88 (22%)
Query: 35 ELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFISHSQEETQEMLEEAKKNL 94
E KE +E K++ ++ + D D I +A D +EM EE ++L
Sbjct: 148 EAKEALEAKERYMEEMADTADAIEMATLD--------------------KEMAEERAESL 187
Query: 95 QEEIDALESRVESIQRVLADLKVQLYAK 122
Q+E++AL+ RV+ + L LK ++ K
Sbjct: 188 QQEVEALKERVDELTTDLEILKAEIEEK 215
Score = 36.6 bits (83), Expect = 0.006
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 10 AEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPY 69
AE + + ED++ + K + + +I EE+ +L LE D D+ +
Sbjct: 804 AEGLGLKLEDRETVIKELKKSLKIKG--EELSEANVRLSLLEKKLDSAAKDADERIEK-- 859
Query: 70 QIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQL 119
+ EETQ +L + +K +E +DAL++ ++ ++ A+LK +L
Sbjct: 860 ------VQTRLEETQALLRKKEKEFEETMDALQADIDQLEAEKAELKQRL 903
>gi|205277392 dynactin 1 isoform 3 [Homo sapiens]
Length = 1253
Score = 40.4 bits (93), Expect = 4e-04
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 20/88 (22%)
Query: 35 ELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFISHSQEETQEMLEEAKKNL 94
E KE +E K++ ++ + D D I +A D +EM EE ++L
Sbjct: 262 EAKEALEAKERYMEEMADTADAIEMATLD--------------------KEMAEERAESL 301
Query: 95 QEEIDALESRVESIQRVLADLKVQLYAK 122
Q+E++AL+ RV+ + L LK ++ K
Sbjct: 302 QQEVEALKERVDELTTDLEILKAEIEEK 329
Score = 36.6 bits (83), Expect = 0.006
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 10 AEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPY 69
AE + + ED++ + K + + +I EE+ +L LE D D+ +
Sbjct: 918 AEGLGLKLEDRETVIKELKKSLKIKG--EELSEANVRLSLLEKKLDSAAKDADERIEK-- 973
Query: 70 QIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQL 119
+ EETQ +L + +K +E +DAL++ ++ ++ A+LK +L
Sbjct: 974 ------VQTRLEETQALLRKKEKEFEETMDALQADIDQLEAEKAELKQRL 1017
>gi|13259508 dynactin 1 isoform 2 [Homo sapiens]
Length = 1144
Score = 40.4 bits (93), Expect = 4e-04
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 20/88 (22%)
Query: 35 ELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFISHSQEETQEMLEEAKKNL 94
E KE +E K++ ++ + D D I +A D +EM EE ++L
Sbjct: 148 EAKEALEAKERYMEEMADTADAIEMATLD--------------------KEMAEERAESL 187
Query: 95 QEEIDALESRVESIQRVLADLKVQLYAK 122
Q+E++AL+ RV+ + L LK ++ K
Sbjct: 188 QQEVEALKERVDELTTDLEILKAEIEEK 215
Score = 36.6 bits (83), Expect = 0.006
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 10 AEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPY 69
AE + + ED++ + K + + +I EE+ +L LE D D+ +
Sbjct: 804 AEGLGLKLEDRETVIKELKKSLKIKG--EELSEANVRLSLLEKKLDSAAKDADERIEK-- 859
Query: 70 QIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQL 119
+ EETQ +L + +K +E +DAL++ ++ ++ A+LK +L
Sbjct: 860 ------VQTRLEETQALLRKKEKEFEETMDALQADIDQLEAEKAELKQRL 903
>gi|13259510 dynactin 1 isoform 1 [Homo sapiens]
Length = 1278
Score = 40.4 bits (93), Expect = 4e-04
Identities = 25/88 (28%), Positives = 43/88 (48%), Gaps = 20/88 (22%)
Query: 35 ELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFISHSQEETQEMLEEAKKNL 94
E KE +E K++ ++ + D D I +A D +EM EE ++L
Sbjct: 282 EAKEALEAKERYMEEMADTADAIEMATLD--------------------KEMAEERAESL 321
Query: 95 QEEIDALESRVESIQRVLADLKVQLYAK 122
Q+E++AL+ RV+ + L LK ++ K
Sbjct: 322 QQEVEALKERVDELTTDLEILKAEIEEK 349
Score = 36.6 bits (83), Expect = 0.006
Identities = 27/110 (24%), Positives = 53/110 (48%), Gaps = 10/110 (9%)
Query: 10 AEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPY 69
AE + + ED++ + K + + +I EE+ +L LE D D+ +
Sbjct: 938 AEGLGLKLEDRETVIKELKKSLKIKG--EELSEANVRLSLLEKKLDSAAKDADERIEK-- 993
Query: 70 QIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQL 119
+ EETQ +L + +K +E +DAL++ ++ ++ A+LK +L
Sbjct: 994 ------VQTRLEETQALLRKKEKEFEETMDALQADIDQLEAEKAELKQRL 1037
>gi|38044112 restin isoform b [Homo sapiens]
Length = 1392
Score = 40.4 bits (93), Expect = 4e-04
Identities = 22/92 (23%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 29 NTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFIS--HSQEETQEM 86
N+S++T++ +E+ +K++ ++ L+ + A+++ + I D+ + SQ+E +
Sbjct: 894 NSSQLTKMNDELRLKERDVEELQLK---LTKANENASFLQKSIEDMTVKAEQSQQEAAKK 950
Query: 87 LEEAKKNLQEEIDALESRVESIQRVLADLKVQ 118
EE KK L+ ++ LE ++E+ +LK +
Sbjct: 951 HEEEKKELERKLSDLEKKMETSHNQCQELKAR 982
Score = 28.1 bits (61), Expect = 2.2
Identities = 26/146 (17%), Positives = 62/146 (42%), Gaps = 17/146 (11%)
Query: 5 MKKAAAEDVNVTFEDQQKINKFARNTS--------RITELKEEIEVKKKQLQNLEDACDD 56
MKK ++ + E++ + K TS + +L+ E+ V + + + +
Sbjct: 1167 MKKRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSV 1226
Query: 57 IMLADDDCLMIPYQIGDVFI---------SHSQEETQEMLEEAKKNLQEEIDALESRVES 107
+ + D + + ++ ++ + S S T +E ++ + +ID L S +
Sbjct: 1227 VQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQIDFLNSVIVD 1286
Query: 108 IQRVLADLKVQLYAKFGSNINLEADE 133
+QR DLK+++ + +N D+
Sbjct: 1287 LQRKNQDLKMKVEMMSEAALNGNGDD 1312
>gi|4506751 restin isoform a [Homo sapiens]
Length = 1427
Score = 40.4 bits (93), Expect = 4e-04
Identities = 22/92 (23%), Positives = 52/92 (56%), Gaps = 5/92 (5%)
Query: 29 NTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFIS--HSQEETQEM 86
N+S++T++ +E+ +K++ ++ L+ + A+++ + I D+ + SQ+E +
Sbjct: 929 NSSQLTKMNDELRLKERDVEELQLK---LTKANENASFLQKSIEDMTVKAEQSQQEAAKK 985
Query: 87 LEEAKKNLQEEIDALESRVESIQRVLADLKVQ 118
EE KK L+ ++ LE ++E+ +LK +
Sbjct: 986 HEEEKKELERKLSDLEKKMETSHNQCQELKAR 1017
Score = 28.1 bits (61), Expect = 2.2
Identities = 26/146 (17%), Positives = 62/146 (42%), Gaps = 17/146 (11%)
Query: 5 MKKAAAEDVNVTFEDQQKINKFARNTS--------RITELKEEIEVKKKQLQNLEDACDD 56
MKK ++ + E++ + K TS + +L+ E+ V + + + +
Sbjct: 1202 MKKRESKFIKDADEEKASLQKSISITSALLTEKDAELEKLRNEVTVLRGENASAKSLHSV 1261
Query: 57 IMLADDDCLMIPYQIGDVFI---------SHSQEETQEMLEEAKKNLQEEIDALESRVES 107
+ + D + + ++ ++ + S S T +E ++ + +ID L S +
Sbjct: 1262 VQTLESDKVKLELKVKNLELQLKENKRQLSSSSGNTDTQADEDERAQESQIDFLNSVIVD 1321
Query: 108 IQRVLADLKVQLYAKFGSNINLEADE 133
+QR DLK+++ + +N D+
Sbjct: 1322 LQRKNQDLKMKVEMMSEAALNGNGDD 1347
>gi|5730075 fibrinogen-like 2 precursor [Homo sapiens]
Length = 439
Score = 38.9 bits (89), Expect = 0.001
Identities = 27/93 (29%), Positives = 48/93 (51%), Gaps = 13/93 (13%)
Query: 31 SRITELKEEIEVKKKQLQNLEDACDDIMLADDD-------CLMIPY-----QIGDVFISH 78
SRI E+ +E++ K+ + +L+ +C D L DD L++P ++GD +
Sbjct: 73 SRIEEVFKEVQNLKEIVNSLKKSCQDCKLQADDNGDPGRNGLLLPSTGAPGEVGDNRVRE 132
Query: 79 SQEETQEMLEEAKKNLQEEIDALESRVESIQRV 111
+ E ++ E KN +EEI+ L R+E + V
Sbjct: 133 LESEVNKLSSEL-KNAKEEINVLHGRLEKLNLV 164
>gi|96975038 coiled-coil domain containing 100 [Homo sapiens]
Length = 986
Score = 37.0 bits (84), Expect = 0.005
Identities = 27/119 (22%), Positives = 59/119 (49%), Gaps = 14/119 (11%)
Query: 5 MKKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQ-----NLEDACDDIML 59
+KK AE + + Q+ + + ++ ++ E++ +KK+LQ NL++ D I
Sbjct: 698 VKKKVAEYTILEGKLQKTLIDLEKREQQLASVESELQREKKELQSERQRNLQELQDSIRR 757
Query: 60 ADDDCLMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQ 118
A +DC+ +Q+ + + LEE K LQ++++ E++ + +++ K Q
Sbjct: 758 AKEDCI---HQV------ELERLKIKQLEEDKHRLQQQLNDAENKYKILEKEFQQFKDQ 807
>gi|41406064 myosin, heavy polypeptide 10, non-muscle [Homo sapiens]
Length = 1976
Score = 36.2 bits (82), Expect = 0.008
Identities = 29/114 (25%), Positives = 59/114 (51%), Gaps = 18/114 (15%)
Query: 11 EDVNVTFEDQQKI--NKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIP 68
ED N F ++K+ ++ A +S++ E +E K K L + + ++M++D + +
Sbjct: 991 EDQNSKFIKEKKLMEDRIAECSSQLAEEEE----KAKNLAKIRNK-QEVMISDLEERL-- 1043
Query: 69 YQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAK 122
+E+T++ LE+AK+ L E L+ ++ +Q + +LK+QL K
Sbjct: 1044 ---------KKEEKTRQELEKAKRKLDGETTDLQDQIAELQAQIDELKLQLAKK 1088
Score = 36.2 bits (82), Expect = 0.008
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 8/90 (8%)
Query: 18 EDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFIS 77
E +QK+N +SRI +L+EE ++Q + E+A ++ + L + Q+ D
Sbjct: 1327 ETRQKLNL----SSRIRQLEEEKNSLQEQQEEEEEARKNL---EKQVLALQSQLADTKKK 1379
Query: 78 HSQE-ETQEMLEEAKKNLQEEIDALESRVE 106
+ T E LEEAKK L ++ +AL R+E
Sbjct: 1380 VDDDLGTIESLEEAKKKLLKDAEALSQRLE 1409
Score = 33.9 bits (76), Expect = 0.040
Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 12/104 (11%)
Query: 18 EDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFIS 77
E + K AR E KEE E + KQL+ +D+M + DD +G
Sbjct: 1480 EKETKALSLARALEEALEAKEEFERQNKQLR---ADMEDLMSSKDD-------VGKNV-- 1527
Query: 78 HSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYA 121
H E+++ LE+ + ++ +++ LE +++ + L+V + A
Sbjct: 1528 HELEKSKRALEQQVEEMRTQLEELEDELQATEDAKLRLEVNMQA 1571
Score = 33.1 bits (74), Expect = 0.069
Identities = 21/88 (23%), Positives = 47/88 (53%), Gaps = 5/88 (5%)
Query: 24 NKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFIS-----H 78
++ A ++I ELK ++ K+++LQ DD L ++ L + ++
Sbjct: 1069 DQIAELQAQIDELKLQLAKKEEELQGALARGDDETLHKNNALKVVRELQAQIAELQEDFE 1128
Query: 79 SQEETQEMLEEAKKNLQEEIDALESRVE 106
S++ ++ E+ K++L EE++AL++ +E
Sbjct: 1129 SEKASRNKAEKQKRDLSEELEALKTELE 1156
Score = 32.3 bits (72), Expect = 0.12
Identities = 30/116 (25%), Positives = 56/116 (48%), Gaps = 13/116 (11%)
Query: 10 AEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACD-DIMLADDDCLMIP 68
+E + E +K +K ++ L EE E KK ++ +DA + L D L+
Sbjct: 1269 SEGDRLRVELAEKASKLQNELDNVSTLLEEAE--KKGIKFAKDAASLESQLQDTQELLQE 1326
Query: 69 YQIGDVFIS----------HSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLAD 114
+ +S +S +E QE EEA+KNL++++ AL+S++ ++ + D
Sbjct: 1327 ETRQKLNLSSRIRQLEEEKNSLQEQQEEEEEARKNLEKQVLALQSQLADTKKKVDD 1382
>gi|156104908 myosin heavy chain 6 [Homo sapiens]
Length = 1939
Score = 35.8 bits (81), Expect = 0.011
Identities = 21/93 (22%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 21 QKINKFARNTSRITELKEEIEVKKKQLQN-LEDACDDIMLADDDCLMIPYQIGDVF--IS 77
+++ + +N + ++++++EV+K +LQ+ LE+A + + L + + I
Sbjct: 1516 EQLGEGGKNVHELEKVRKQLEVEKLELQSALEEAEASLEHEEGKILRAQLEFNQIKAEIE 1575
Query: 78 HSQEETQEMLEEAKKNLQEEIDALESRVESIQR 110
E E +E+AK+N Q +D+L++ +++ R
Sbjct: 1576 RKLAEKDEEMEQAKRNHQRVVDSLQTSLDAETR 1608
Score = 34.7 bits (78), Expect = 0.024
Identities = 21/89 (23%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 23 INKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFISHSQEE 82
IN+ + S +T+L+ E+E ++ +N E+ A D M+ ++ +++
Sbjct: 1726 INQKKKMESDLTQLQSEVEEAVQECRNAEEKAKK---AITDAAMMAEEL------KKEQD 1776
Query: 83 TQEMLEEAKKNLQEEIDALESRVESIQRV 111
T LE KKN+++ I L+ R++ +++
Sbjct: 1777 TSAHLERMKKNMEQTIKDLQHRLDEAEQI 1805
Score = 33.1 bits (74), Expect = 0.069
Identities = 28/108 (25%), Positives = 43/108 (39%), Gaps = 24/108 (22%)
Query: 14 NVTFEDQQKI-----NKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIP 68
N ED+Q + K N +RI EL+EE+E ++ +E D+
Sbjct: 1093 NSKIEDEQVLALQLQKKLKENQARIEELEEELEAERTARAKVEKLRSDL----------- 1141
Query: 69 YQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLK 116
S EE E LEEA +I+ + R Q++ DL+
Sbjct: 1142 --------SRELEEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLE 1181
Score = 30.0 bits (66), Expect = 0.58
Identities = 27/136 (19%), Positives = 62/136 (45%), Gaps = 28/136 (20%)
Query: 7 KAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLE--------------- 51
+A +++N ED++++N A T++ +L++E KK + +LE
Sbjct: 918 EAKVKEMNERLEDEEEMN--AELTAKKRKLEDECSELKKDIDDLELTLAKVEKEKHATEN 975
Query: 52 ---DACDDIMLADDDCLMIPYQIGDVFISHSQ--------EETQEMLEEAKKNLQEEIDA 100
+ +++ D+ + + + +H Q E+ L ++K L++++D
Sbjct: 976 KVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQVEEDKVNSLSKSKVKLEQQVDD 1035
Query: 101 LESRVESIQRVLADLK 116
LE +E ++V DL+
Sbjct: 1036 LEGSLEQEKKVRMDLE 1051
Score = 28.1 bits (61), Expect = 2.2
Identities = 26/112 (23%), Positives = 48/112 (42%), Gaps = 21/112 (18%)
Query: 30 TSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFISHSQEETQEMLEE 89
T I +E E KKK Q L+DA + + + C S E+T+ L+
Sbjct: 1379 TDAIQRTEELEEAKKKLAQRLQDAEEAVEAVNAKC-------------SSLEKTKHRLQN 1425
Query: 90 AKKNLQEEID-------ALESRVESIQRVLADLKVQLYAKFGSNINLEADES 134
++L +++ AL+ + + ++LA+ K Q Y + S + E+
Sbjct: 1426 EIEDLMVDVERSNAAAAALDKKQRNFDKILAEWK-QKYEESQSELESSQKEA 1476
>gi|194097392 Golgi autoantigen, golgin subfamily a, 2 [Homo
sapiens]
Length = 1002
Score = 35.4 bits (80), Expect = 0.014
Identities = 27/126 (21%), Positives = 59/126 (46%), Gaps = 18/126 (14%)
Query: 25 KFARNTSRITELKEEIEVKKKQLQNLEDACDDIM------------LADD-----DCLMI 67
K +++ELKE +E+K ++ Q+L+ D + L + + L++
Sbjct: 583 KLGELQEKLSELKETVELKSQEAQSLQQQRDQYLGHLQQYVAAYQQLTSEKEVLHNQLLL 642
Query: 68 PYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFGSNI 127
Q+ D + + + + + E A++ LQE + LE+ + Q++ A L + + G +
Sbjct: 643 QTQLVDQ-LQQQEAQGKAVAEMARQELQETQERLEAATQQNQQLRAQLSLMAHPGEGDGL 701
Query: 128 NLEADE 133
+ E +E
Sbjct: 702 DREEEE 707
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 35.4 bits (80), Expect = 0.014
Identities = 24/86 (27%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 27 ARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFISHSQEETQEM 86
A+ T +IT L E + KK+ Q+ + ++ DD L + + + ++Q+E + +
Sbjct: 1237 AKLTMQITALNENLGTVKKEWQSSQRRVSELEKQTDD-LRGEIAVLEATVQNNQDERRAL 1295
Query: 87 LEEAKKNLQEEIDALESRVESIQRVL 112
LE K + EI+ L+++V +QR L
Sbjct: 1296 LERCLKG-EGEIEKLQTKVLELQRKL 1320
Score = 28.5 bits (62), Expect = 1.7
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 18/93 (19%)
Query: 33 ITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFISHSQEETQEMLEEAKK 92
I ELK+ E KKKQ++ L+ +L + + + Q+ L +A +
Sbjct: 961 INELKQSSEQKKKQIEALQGELKIAVLQKTEL---------------ENKLQQQLTQAAQ 1005
Query: 93 NL---QEEIDALESRVESIQRVLADLKVQLYAK 122
L +E+I L++ E Q L+ Y +
Sbjct: 1006 ELAAEKEKISVLQNNYEKSQETFKQLQSDFYGR 1038
>gi|114842389 myosin, heavy polypeptide 7B, cardiac muscle, beta [Homo
sapiens]
Length = 1983
Score = 35.4 bits (80), Expect = 0.014
Identities = 29/103 (28%), Positives = 47/103 (45%), Gaps = 10/103 (9%)
Query: 4 TMKKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDI--MLAD 61
T KA+AE + T+EDQ K ++ EL+ ++ Q L+ ++ +L +
Sbjct: 1288 TRAKASAEKLCRTYEDQLSEAKI-----KVEELQRQLADASTQRGRLQTESGELSRLLEE 1342
Query: 62 DDCLMIPYQIGDVFISHSQEETQEMLEE---AKKNLQEEIDAL 101
+CL+ G + S EE + LEE AK L + AL
Sbjct: 1343 KECLISQLSRGKALAAQSLEELRRQLEEESKAKSALAHAVQAL 1385
Score = 32.0 bits (71), Expect = 0.15
Identities = 26/104 (25%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 35 ELKEEIEVKKKQLQNLEDACDDIMLA----DDDCLMIPYQIGDVFISHSQEETQEMLEEA 90
+L+ +++ ++L++ E+ D+ +D+C + I D+ ++ ++ E ++ E
Sbjct: 963 QLEGKVKELSERLEDEEEVNADLAARRRKLEDECTELKKDIDDLKLTLAKAEKEKQATEN 1022
Query: 91 K-KNLQEEIDALESRVESIQRVLADLKVQLYAKFGSNINLEADE 133
K KNL EE+ AL+ ES+ R+ + K A + +L+A+E
Sbjct: 1023 KVKNLTEEMAALD---ESVARLTKEKKALQEAHQQALGDLQAEE 1063
Score = 30.0 bits (66), Expect = 0.58
Identities = 29/124 (23%), Positives = 56/124 (45%), Gaps = 8/124 (6%)
Query: 11 EDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQ 70
E +VT E ++ + A + L+ +E +++Q + ++ ++ A + + +
Sbjct: 1473 ESEDVTLELERATSAAAALDKKQRHLERALEERRRQEEEMQR---ELEAAQRESRGLGTE 1529
Query: 71 IGDVFISHSQEETQEMLEEAK---KNLQEEIDALESRVESIQRVLADLKVQLYAKFGSNI 127
+ + H EE E LE K KNLQEEI L +V + + +L+ A G
Sbjct: 1530 L--FRLRHGHEEALEALETLKRENKNLQEEISDLTDQVSLSGKSIQELEKTKKALEGEKS 1587
Query: 128 NLEA 131
++A
Sbjct: 1588 EIQA 1591
>gi|109715852 chromosome 6 open reading frame 204 isoform a [Homo
sapiens]
Length = 805
Score = 35.4 bits (80), Expect = 0.014
Identities = 29/110 (26%), Positives = 52/110 (47%), Gaps = 22/110 (20%)
Query: 18 EDQQKINKFARNTSR-ITELK-------EEIEVKKKQLQNLEDACDDIMLADDDCLMIPY 69
E+++K+ + + R I+ LK E+ + K+++++ LE D+ DD
Sbjct: 471 EEKKKLEEKLKTRDRYISSLKKKCQKESEQNKEKQRRIETLEKYLADLPTLDD------- 523
Query: 70 QIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQL 119
SQ ++LEE KNLQE + E ++E I++ D + QL
Sbjct: 524 -------VQSQSLQLQILEEKNKNLQEALIDTEKKLEEIKKQCQDKETQL 566
>gi|18079254 p53 and DNA damage-regulated protein [Homo sapiens]
Length = 133
Score = 35.0 bits (79), Expect = 0.018
Identities = 23/85 (27%), Positives = 48/85 (56%), Gaps = 15/85 (17%)
Query: 33 ITELKEEIEVKKKQLQNLEDACD-----------DIMLADDDCLMIPYQIGDVFISHSQE 81
+ EL EE+ K+Q+ +L+ + D+ L++D +M+ + G++FI
Sbjct: 16 VEELAEEVLADKRQIVDLDTKRNQNREGLRALQKDLSLSED--VMVCF--GNMFIKMPHP 71
Query: 82 ETQEMLEEAKKNLQEEIDALESRVE 106
ET+EM+E+ + +L +EI+ L +++
Sbjct: 72 ETKEMIEKDQDHLDKEIEKLRKQLK 96
>gi|110624781 myosin, heavy polypeptide 13, skeletal muscle [Homo
sapiens]
Length = 1938
Score = 35.0 bits (79), Expect = 0.018
Identities = 28/110 (25%), Positives = 46/110 (41%), Gaps = 23/110 (20%)
Query: 20 QQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFISHS 79
+ K+ + E+ E+ KK+ NLED C + DD + ++
Sbjct: 920 EAKVKELTERLEEEEEMNSELVAKKR---NLEDKCSSLKRDIDDLELTLTKV-------- 968
Query: 80 QEETQEMLEEAKKNLQEEIDALESRV-----------ESIQRVLADLKVQ 118
E+ + E KNL EE+ ALE + E+ Q+ L DL+V+
Sbjct: 969 -EKEKHATENKVKNLSEEMTALEENISKLTKEKKSLQEAHQQTLDDLQVE 1017
Score = 31.6 bits (70), Expect = 0.20
Identities = 32/145 (22%), Positives = 72/145 (49%), Gaps = 20/145 (13%)
Query: 5 MKKAAAEDVNVTFEDQQKINK--FARNTSRITELKEEI-----EVKKKQLQNLEDACDDI 57
+K A AE T ++ + K AR+ +R EL+E++ E QLQ ++ +++
Sbjct: 844 LKSAEAEKEMATMKEDFERTKEELARSEARRKELEEKMVSLLQEKNDLQLQ-VQSETENL 902
Query: 58 MLADDDC-------LMIPYQIGDVFISHSQEETQEMLEEA---KKNLQEEIDALESRVES 107
M A++ C +++ ++ + ++ EE +EM E K+NL+++ +L+ ++
Sbjct: 903 MDAEERCEGLIKSKILLEAKVKE--LTERLEEEEEMNSELVAKKRNLEDKCSSLKRDIDD 960
Query: 108 IQRVLADLKVQLYAKFGSNINLEAD 132
++ L ++ + +A NL +
Sbjct: 961 LELTLTKVEKEKHATENKVKNLSEE 985
Score = 28.1 bits (61), Expect = 2.2
Identities = 28/111 (25%), Positives = 46/111 (41%), Gaps = 23/111 (20%)
Query: 7 KAAAEDVNV-TFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCL 65
+A +D V + + Q+KI + +RI EL+EEIE + +E D+
Sbjct: 1095 QAKIDDEQVHSLQFQKKIKELQ---ARIEELEEEIEAEHTLRAKIEKQRSDL-------- 1143
Query: 66 MIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLK 116
+ EE E LEEA +I+ + R Q++ DL+
Sbjct: 1144 -----------ARELEEISERLEEASGATSAQIEMNKKREAEFQKMRRDLE 1183
>gi|34577114 cytomatrix protein p110 [Homo sapiens]
Length = 957
Score = 35.0 bits (79), Expect = 0.018
Identities = 29/113 (25%), Positives = 55/113 (48%), Gaps = 19/113 (16%)
Query: 20 QQKINKFARNTSRITELKEEIEVKKKQLQNLEDA----------CDDIMLADDDCLMIPY 69
++KIN + +I L+E++ K KQL NL+D D + ++ L
Sbjct: 538 ERKINVLQK---KIENLQEQLRDKDKQLTNLKDRVKSLQTDSSNTDTALATLEEALSEKE 594
Query: 70 QIGDVFISHSQEETQEMLEEAK------KNLQEEIDALESRVESIQRVLADLK 116
+I + + + +E LEE + K+L+E+++AL++ + + L DLK
Sbjct: 595 RIIERLKEQRERDDRERLEEIESFRKENKDLKEKVNALQAELTEKESSLIDLK 647
Score = 28.9 bits (63), Expect = 1.3
Identities = 24/89 (26%), Positives = 42/89 (47%), Gaps = 9/89 (10%)
Query: 31 SRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFISHSQEETQEMLEEA 90
++I +LK+E+ K+ +L L+ + + + DC Q +V +E+ E+
Sbjct: 434 TKIDQLKQELSKKESELLALQTKLETLSNQNSDC----KQHIEVL-----KESLTAKEQR 484
Query: 91 KKNLQEEIDALESRVESIQRVLADLKVQL 119
LQ E+DAL R+E + L QL
Sbjct: 485 AAILQTEVDALRLRLEEKESFLNKKTKQL 513
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 34.7 bits (78), Expect = 0.024
Identities = 26/114 (22%), Positives = 57/114 (50%), Gaps = 5/114 (4%)
Query: 18 EDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFIS 77
+ +QKI + A + + EL+ +++ +KKQLQ + + ++ +I D +
Sbjct: 1109 QKEQKIKEHATTVNELEELQVQLQKEKKQLQKTMQELELVKKDAQQTTLMNMEIAD-YER 1167
Query: 78 HSQEETQEMLEEAKK--NLQEEIDALESRVESIQRVLADLK--VQLYAKFGSNI 127
+E Q++ + K +L++EI + + E++Q + L+ VQ Y + + I
Sbjct: 1168 LMKELNQKLTNKNNKIEDLEQEIKIQKQKQETLQEEITSLQSSVQQYEEKNTKI 1221
>gi|15618995 keratin 71 [Homo sapiens]
Length = 523
Score = 34.7 bits (78), Expect = 0.024
Identities = 27/109 (24%), Positives = 53/109 (48%), Gaps = 4/109 (3%)
Query: 24 NKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVF---ISHSQ 80
N+ + T I ++ EIE KKQ NLE A D D+ L D + ++
Sbjct: 346 NEISELTRLIQRIRSEIENVKKQASNLETAIADAEQRGDNALKDARAKLDELEGALHQAK 405
Query: 81 EETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFGSNINL 129
EE ML E ++ + ++ AL+ + + +++L + ++ +F S +++
Sbjct: 406 EELARMLREYQELMSLKL-ALDMEIATYRKLLESEECRMSGEFPSPVSI 453
>gi|237858621 polyamine modulated factor 1 binding protein 1 isoform
b [Homo sapiens]
Length = 882
Score = 34.7 bits (78), Expect = 0.024
Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Query: 23 INKFARNTSRITELKEEIEVKKKQLQNLED--ACDDIMLADDDCLMIPYQ--IGDVFISH 78
I + R++E+ +++ + +Q L + AC + ++ + + +I Q +H
Sbjct: 87 IQEHQETQKRLSEVWQKVSQQDDLIQELRNKLACSNALVLEREKALIKLQADFASCTATH 146
Query: 79 ----SQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFGSNINLEAD 132
S E E +++ K+LQE+ D+ VE Q ++ DL+V+L A N+ D
Sbjct: 147 RYPPSSSEECEDIKKILKHLQEQKDSQCLHVEEYQNLVKDLRVELEAVSEQKRNIMKD 204
Score = 27.3 bits (59), Expect = 3.8
Identities = 24/106 (22%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Query: 33 ITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFISHSQEETQEMLEEAKK 92
+ E + +E K++QL+ ++ + +M + + L ++ D + +E LEE +
Sbjct: 464 LQEATKLLEDKREQLKKSKEH-EKLMEGELEALRQEFKKKDKTL----KENSRKLEEENE 518
Query: 93 NLQEEIDALESRVES-------IQRVLADLKVQLYAKFGSNINLEA 131
NL+ E+ +++ES Q+V+ DL ++ + S ++L+A
Sbjct: 519 NLRAELQCCSTQLESSLNKYNTSQQVIQDLNKEIALQKESLMSLQA 564
>gi|237858619 polyamine modulated factor 1 binding protein 1 isoform
a [Homo sapiens]
Length = 1007
Score = 34.7 bits (78), Expect = 0.024
Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 8/118 (6%)
Query: 23 INKFARNTSRITELKEEIEVKKKQLQNLED--ACDDIMLADDDCLMIPYQ--IGDVFISH 78
I + R++E+ +++ + +Q L + AC + ++ + + +I Q +H
Sbjct: 232 IQEHQETQKRLSEVWQKVSQQDDLIQELRNKLACSNALVLEREKALIKLQADFASCTATH 291
Query: 79 ----SQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFGSNINLEAD 132
S E E +++ K+LQE+ D+ VE Q ++ DL+V+L A N+ D
Sbjct: 292 RYPPSSSEECEDIKKILKHLQEQKDSQCLHVEEYQNLVKDLRVELEAVSEQKRNIMKD 349
Score = 27.3 bits (59), Expect = 3.8
Identities = 24/106 (22%), Positives = 54/106 (50%), Gaps = 12/106 (11%)
Query: 33 ITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFISHSQEETQEMLEEAKK 92
+ E + +E K++QL+ ++ + +M + + L ++ D + +E LEE +
Sbjct: 609 LQEATKLLEDKREQLKKSKEH-EKLMEGELEALRQEFKKKDKTL----KENSRKLEEENE 663
Query: 93 NLQEEIDALESRVES-------IQRVLADLKVQLYAKFGSNINLEA 131
NL+ E+ +++ES Q+V+ DL ++ + S ++L+A
Sbjct: 664 NLRAELQCCSTQLESSLNKYNTSQQVIQDLNKEIALQKESLMSLQA 709
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 34.7 bits (78), Expect = 0.024
Identities = 29/119 (24%), Positives = 54/119 (45%), Gaps = 17/119 (14%)
Query: 18 EDQQKINKFARNTS-RITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFI 76
E ++K+ KFA++ +I EL+EE + + ++ D + M + +
Sbjct: 1673 EMKEKMRKFAKSKQQKILELEEENDRLRAEVHPAGDTAKECM--------------ETLL 1718
Query: 77 SH--SQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKFGSNINLEADE 133
S S +E E ++ + L ++ +L S +S+ + DLK Q+ NLEA E
Sbjct: 1719 SSNASMKEELERVKMEYETLSKKFQSLMSEKDSLSEEVQDLKHQIEGNVSKQANLEATE 1777
Score = 34.3 bits (77), Expect = 0.031
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 22/119 (18%)
Query: 6 KKAAAE--DVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDD 63
KKA AE V +D Q +R+ L + +++KK+ N E + D+D
Sbjct: 2071 KKAQAELASFKVLLDDTQS------EAARV--LADNLKLKKELQSNKESVKSQMKQKDED 2122
Query: 64 CLMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAK 122
+ E+ +E + KKN+QE++DAL ++ + +++V L K
Sbjct: 2123 ------------LERRLEQAEEKHLKEKKNMQEKLDALRREKVHLEETIGEIQVTLNKK 2169
Score = 28.9 bits (63), Expect = 1.3
Identities = 33/127 (25%), Positives = 59/127 (46%), Gaps = 24/127 (18%)
Query: 6 KKAAAEDVNVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCL 65
K+AA + +Q+ + K A +T + KE E + KQLQ + C+
Sbjct: 1418 KEAALTKIQTEIIEQEDLIK-ALHTQLEMQAKEHDE-RIKQLQ--VELCE--------MK 1465
Query: 66 MIPYQIGDVFISHSQEETQEMLEEA----------KKNLQEEIDALESRVESIQRVLADL 115
P +IG+ S ++++ Q L+ A K+LQEE+ +E + + LAD+
Sbjct: 1466 QKPEEIGEE--SRAKQQIQRKLQAALISRKEALKENKSLQEELSLARGTIERLTKSLADV 1523
Query: 116 KVQLYAK 122
+ Q+ A+
Sbjct: 1524 ESQVSAQ 1530
Score = 28.9 bits (63), Expect = 1.3
Identities = 23/94 (24%), Positives = 45/94 (47%), Gaps = 12/94 (12%)
Query: 20 QQKINKFARNTSRITELKEEIEV----KKKQLQNLEDACDDIMLADDDCLMIPYQIGDVF 75
Q+K++ R + E EI+V K K++Q L++ D +
Sbjct: 2142 QEKLDALRREKVHLEETIGEIQVTLNKKDKEVQQLQENLDSTVTQ--------LAAFTKS 2193
Query: 76 ISHSQEETQEMLEEAKKNLQEEIDALESRVESIQ 109
+S Q++ +++EAKK ++ DA++S+ E I+
Sbjct: 2194 MSSLQDDRDRVIDEAKKWERKFSDAIQSKEEEIR 2227
Score = 27.7 bits (60), Expect = 2.9
Identities = 29/126 (23%), Positives = 53/126 (42%), Gaps = 22/126 (17%)
Query: 14 NVTFEDQQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLM------- 66
N T ED Q+ +A + ELK+ I K QLQ ++A + A D+ +
Sbjct: 44 NTTQEDVQERLAYAEQL--VVELKDIIRQKDVQLQQKDEALQEERKAADNKIKKLKLHAK 101
Query: 67 ------------IPYQIGDVFISHSQEETQEMLEEAKKNLQE-EIDALESRVESIQRVLA 113
+ Q G V + Q E Q + +E EI+ ++ +++ + +++
Sbjct: 102 AKLTSLNKYIEEMKAQGGTVLPTEPQSEEQLSKHDKSSTEEEMEIEKIKHKLQEKEELIS 161
Query: 114 DLKVQL 119
L+ QL
Sbjct: 162 TLQAQL 167
Score = 26.2 bits (56), Expect = 8.4
Identities = 20/100 (20%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 22 KINKFARNTS---RITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFISH 78
K +K A +T + EL++E E+ + +N+ + + I + ++ S
Sbjct: 1594 KSSKIAESTEWQEKHKELQKEYEILLQSYENVSNEAERIQHVVEAVRQEKQELYGKLRST 1653
Query: 79 --SQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLK 116
+++ET++ L+EA++ ++E + + +S Q+ + +L+
Sbjct: 1654 EANKKETEKQLQEAEQEMEEMKEKMRKFAKSKQQKILELE 1693
>gi|119395750 keratin 1 [Homo sapiens]
Length = 644
Score = 34.3 bits (77), Expect = 0.031
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 22/97 (22%)
Query: 33 ITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFISHSQEETQEMLEEAKK 92
I L+ EI+ KKQ+ NL+ + IS +++ + L++AK
Sbjct: 405 IQRLRSEIDNVKKQISNLQQS----------------------ISDAEQRGENALKDAKN 442
Query: 93 NLQEEIDALESRVESIQRVLADLKVQLYAKFGSNINL 129
L + DAL+ E + R+L D + + K ++ +
Sbjct: 443 KLNDLEDALQQAKEDLARLLRDYQELMNTKLALDLEI 479
>gi|112420968 coiled-coil domain containing 158 [Homo sapiens]
Length = 1113
Score = 34.3 bits (77), Expect = 0.031
Identities = 32/141 (22%), Positives = 60/141 (42%), Gaps = 13/141 (9%)
Query: 4 TMKKAAAEDVNVTFED-----QQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIM 58
T KK E T D Q+K + IT+L+ +++K ++LQ+L++ D +
Sbjct: 485 TAKKMTLESSERTISDLTTSLQEKERAIEATNAEITKLRSRVDLKLQELQHLKNEGDHLR 544
Query: 59 LADDDCLMIPYQI--GDVFISHSQEETQEMLEEAKKN------LQEEIDALESRVESIQR 110
+C + Q+ D I +++ + M + ++ +Q E LE + +
Sbjct: 545 NVQTECEALKLQMTEKDKVIEILRQQIENMTQLVGQHGRTAGAMQVEKAQLEKEINDRRM 604
Query: 111 VLADLKVQLYAKFGSNINLEA 131
L +LK+ K LEA
Sbjct: 605 ELKELKILKDKKDAKIRELEA 625
Score = 26.6 bits (57), Expect = 6.4
Identities = 15/42 (35%), Positives = 24/42 (57%), Gaps = 4/42 (9%)
Query: 81 EETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAK 122
E T+EML + + EE+ A + +ES +R ++DL L K
Sbjct: 471 ESTKEML----RKVVEELTAKKMTLESSERTISDLTTSLQEK 508
>gi|31982906 cingulin-like 1 [Homo sapiens]
Length = 1302
Score = 34.3 bits (77), Expect = 0.031
Identities = 30/121 (24%), Positives = 56/121 (46%), Gaps = 11/121 (9%)
Query: 7 KAAAEDVNVTFEDQQKI-NKFARNTSRIT-ELKEEIEVKKKQLQNLEDACDDIMLADDDC 64
K +D+ + E+Q+ + K R + + LKEE+ +++ L++ D + A +
Sbjct: 736 KQDLQDLLIAKEEQEDLLRKRERELTALKGALKEEVSSHDQEMDKLKEQYDAELQALRES 795
Query: 65 LMIPYQIGDVFISHSQEETQE---------MLEEAKKNLQEEIDALESRVESIQRVLADL 115
+ + +V S S Q+ +L+E + LQ + LE RV +QR + DL
Sbjct: 796 VEEATKNVEVLASRSNTSEQDQAGTEMRVKLLQEENEKLQGRSEELERRVAQLQRQIEDL 855
Query: 116 K 116
K
Sbjct: 856 K 856
Score = 30.8 bits (68), Expect = 0.34
Identities = 22/89 (24%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 31 SRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFISHSQEETQ-----E 85
+RI EL++ +E +++ NL+ + + + +M Q+ D +S + ++ Q +
Sbjct: 1153 ARIAELEDRLESEERDRANLQLSNRRLERKVKELVM---QVDDEHLSLTDQKDQLSLRLK 1209
Query: 86 MLEEAKKNLQEEIDALESRVESIQRVLAD 114
++ + +EEID LES + +QR L +
Sbjct: 1210 AMKRQVEEAEEEIDRLESSKKKLQRELEE 1238
>gi|56961680 coiled-coil domain containing 147 [Homo sapiens]
Length = 872
Score = 34.3 bits (77), Expect = 0.031
Identities = 20/86 (23%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 31 SRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFISHSQEETQEMLEEA 90
++I L+ E+E KKQ + A D+++ D ++ + V + Q + ++ E+A
Sbjct: 356 NQIVGLEREVEASKKQAELDRKAMDELLRERD--ILNKNMLKAVNATQKQTDLVKLHEQA 413
Query: 91 KKNLQEEIDALESRVESIQRVLADLK 116
K+NL+ EI + + ++++ L+
Sbjct: 414 KRNLEGEIQNYKDEAQKQRKIIFHLE 439
Score = 26.9 bits (58), Expect = 4.9
Identities = 19/73 (26%), Positives = 34/73 (46%), Gaps = 11/73 (15%)
Query: 20 QQKINKFARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDDCLMIPYQIGDVFISHS 79
QQ+I + SR KE++E + KQ+Q AD D + ++ S
Sbjct: 201 QQEIQQRQNEASREFRKKEKLEKELKQIQ-----------ADMDSRQTEIKALQQYVQKS 249
Query: 80 QEETQEMLEEAKK 92
+EE Q++ ++ K+
Sbjct: 250 KEELQKLEQQLKE 262
>gi|42794779 myosin 18A isoform b [Homo sapiens]
Length = 2039
Score = 33.9 bits (76), Expect = 0.040
Identities = 27/129 (20%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 6 KKAAAEDVNVTFEDQQKINK--FARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDD 63
+K A V F +Q ++K +R ++I EL+ +E ++ Q++ LE L ++
Sbjct: 1795 EKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLAS--RLKENM 1852
Query: 64 CLMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKF 123
+ + + + ++E + L+ ++ +EE+ L + R +L++ L +
Sbjct: 1853 EKLTEERDQRIAAENREKEQNKRLQRQLRDTKEEMGELARKEAEASRKKHELEMDLESLE 1912
Query: 124 GSNINLEAD 132
+N +L+AD
Sbjct: 1913 AANQSLQAD 1921
>gi|28416946 myosin 18A isoform a [Homo sapiens]
Length = 2054
Score = 33.9 bits (76), Expect = 0.040
Identities = 27/129 (20%), Positives = 62/129 (48%), Gaps = 4/129 (3%)
Query: 6 KKAAAEDVNVTFEDQQKINK--FARNTSRITELKEEIEVKKKQLQNLEDACDDIMLADDD 63
+K A V F +Q ++K +R ++I EL+ +E ++ Q++ LE L ++
Sbjct: 1795 EKLQALQSQVEFLEQSMVDKSLVSRQEAKIRELETRLEFERTQVKRLESLAS--RLKENM 1852
Query: 64 CLMIPYQIGDVFISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLKVQLYAKF 123
+ + + + ++E + L+ ++ +EE+ L + R +L++ L +
Sbjct: 1853 EKLTEERDQRIAAENREKEQNKRLQRQLRDTKEEMGELARKEAEASRKKHELEMDLESLE 1912
Query: 124 GSNINLEAD 132
+N +L+AD
Sbjct: 1913 AANQSLQAD 1921
>gi|239754018 PREDICTED: hypothetical protein LOC100129791 [Homo
sapiens]
Length = 338
Score = 33.5 bits (75), Expect = 0.052
Identities = 23/101 (22%), Positives = 51/101 (50%), Gaps = 12/101 (11%)
Query: 19 DQQKINKFARNTSRITELKEEIEVKKKQLQNLE---DACDDIMLADDDCLMIPYQIGDVF 75
D ++ + S +EL+E+I+ K K+++N E + C + + CL ++
Sbjct: 38 DFDELREAGFRRSNYSELREDIQTKGKEVENFEKNLEECITRITNTEKCLKELMEL---- 93
Query: 76 ISHSQEETQEMLEEAKKNLQEEIDALESRVESIQRVLADLK 116
+ + +E+ EE ++L+ D LE RV +++ + ++K
Sbjct: 94 ----KTKARELCEEC-RSLRSRCDQLEERVSAMEDEMNEMK 129
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.127 0.327
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,908,221
Number of Sequences: 37866
Number of extensions: 152819
Number of successful extensions: 2066
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 271
Number of HSP's that attempted gapping in prelim test: 1524
Number of HSP's gapped (non-prelim): 823
length of query: 134
length of database: 18,247,518
effective HSP length: 91
effective length of query: 43
effective length of database: 14,801,712
effective search space: 636473616
effective search space used: 636473616
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.