LOC100129791 21835

Name: LOC100129791	Sequence: fasta or formatted (338aa)		NCBI GI: 239754018
Description: PREDICTED: hypothetical protein LOC100129791		Referenced in: DNA Transposon and Retrovirus-related Sequences
Other entries for this name: alt prot [338aa] PREDICTED: hypothetical protein LOC100129791 alt prot [338aa] PREDICTED: hypothetical protein LOC100129791
Composition: Amino acid Percentage Count Longest homopolymer A alanine 5.3 18 2 C cysteine 1.8 6 1 D aspartate 3.3 11 1 E glutamate 13.0 44 2 F phenylalanine 3.3 11 1 G glycine 3.0 10 1 H histidine 0.6 2 1 I isoleucine 5.9 20 2 K lysine 9.5 32 2 L leucine 8.3 28 2 M methionine 3.6 12 1 N asparagine 5.9 20 2 P proline 3.8 13 3 Q glutamine 6.2 21 1 R arginine 10.4 35 2 S serine 6.5 22 3 T threonine 4.7 16 2 V valine 2.4 8 1 W tryptophan 0.9 3 1 Y tyrosine 1.8 6 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: hypothetical protein LOC100129791 LOC100129791 0.986 PREDICTED: hypothetical protein LOC100129791 LOC100129791 0.986 PREDICTED: hypothetical protein LOC100129791 L1TD1 0.215 LINE-1 type transposase domain containing 1 LOC100291103 0.169 PREDICTED: hypothetical protein XP_002348046 LOC100288854 0.169 PREDICTED: hypothetical protein XP_002344210 LOC100291649 0.169 PREDICTED: similar to lactation elevated 1 (predict... UACA 0.037 uveal autoantigen with coiled-coil domains and ankyr... UACA 0.037 uveal autoantigen with coiled-coil domains and ankyr... KIAA0947 0.036 hypothetical protein LOC23379 RAD50 0.036 RAD50 homolog isoform 2 RAD50 0.036 RAD50 homolog isoform 1 UNC13C 0.034 unc-13 homolog C SMC6 0.034 SMC6 protein SMC6 0.034 SMC6 protein FYCO1 0.031 FYVE and coiled-coil domain containing 1 GOLGA4 0.029 golgi autoantigen, golgin subfamily a, 4 CEP135 0.029 centrosome protein 4 CLIP1 0.029 restin isoform b CLIP1 0.029 restin isoform a SYNE1 0.029 spectrin repeat containing, nuclear envelope 1 isofo... SYNE1 0.029 spectrin repeat containing, nuclear envelope 1 isof... C10orf118 0.029 CTCL tumor antigen L14-2 ANKRD20A5 0.029 PREDICTED: ankyrin repeat domain 20 family, member ... ANKRD20A5 0.029 PREDICTED: ankyrin repeat domain 20 family, member ... MYO6 0.029 myosin VI GOLGA1 0.029 golgin 97 LOC100133220 0.028 PREDICTED: hypothetical protein TCHH 0.028 trichohyalin OPTN 0.028 optineurin Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.