Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 38455388
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38455388 frizzled-related protein [Homo sapiens]
(325 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38455388 frizzled-related protein [Homo sapiens] 674 0.0
gi|170784838 secreted frizzled-related protein 4 [Homo sapiens] 316 2e-86
gi|27894385 frizzled 5 precursor [Homo sapiens] 140 1e-33
gi|13994190 frizzled 8 [Homo sapiens] 132 5e-31
gi|4503833 frizzled 7 [Homo sapiens] 130 2e-30
gi|4503827 frizzled 2 [Homo sapiens] 125 7e-29
gi|4503825 frizzled 1 [Homo sapiens] 124 1e-28
gi|4503835 frizzled 9 [Homo sapiens] 107 2e-23
gi|6005762 frizzled 10 [Homo sapiens] 105 7e-23
gi|22547161 frizzled 4 [Homo sapiens] 104 1e-22
gi|188528609 secreted frizzled-related protein 5 [Homo sapiens] 96 4e-20
gi|8393378 frizzled 3 [Homo sapiens] 95 1e-19
gi|56117838 secreted frizzled-related protein 1 [Homo sapiens] 91 2e-18
gi|48475052 secreted frizzled-related protein 2 precursor [Homo ... 91 2e-18
gi|29244926 corin [Homo sapiens] 90 2e-18
gi|34734079 frizzled 6 [Homo sapiens] 86 3e-17
gi|93204871 netrin 4 [Homo sapiens] 71 1e-12
gi|62388877 carboxypeptidase Z isoform 1 [Homo sapiens] 63 3e-10
gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Ho... 62 5e-10
gi|62388875 carboxypeptidase Z isoform 2 precursor [Homo sapiens] 60 2e-09
gi|13899255 membrane frizzled-related protein [Homo sapiens] 60 3e-09
gi|5032099 smoothened [Homo sapiens] 41 0.002
gi|28212222 WFIKKN2 protein [Homo sapiens] 38 0.011
gi|148613884 netrin 1 [Homo sapiens] 32 0.77
gi|239047498 slingshot 1 isoform 3 [Homo sapiens] 31 1.3
gi|239047441 slingshot 1 isoform 2 [Homo sapiens] 31 1.3
gi|38348368 hypothetical protein LOC374872 [Homo sapiens] 31 1.7
gi|38569407 arylsulfatase B isoform 2 precursor [Homo sapiens] 30 2.2
gi|38569405 arylsulfatase B isoform 1 precursor [Homo sapiens] 30 2.2
gi|239753948 PREDICTED: hypothetical protein [Homo sapiens] 29 5.0
>gi|38455388 frizzled-related protein [Homo sapiens]
Length = 325
Score = 674 bits (1738), Expect = 0.0
Identities = 325/325 (100%), Positives = 325/325 (100%)
Query: 1 MVCGSPGGMLLLRAGLLALAALCLLRVPGARAAACEPVRIPLCKSLPWNMTKMPNHLHHS 60
MVCGSPGGMLLLRAGLLALAALCLLRVPGARAAACEPVRIPLCKSLPWNMTKMPNHLHHS
Sbjct: 1 MVCGSPGGMLLLRAGLLALAALCLLRVPGARAAACEPVRIPLCKSLPWNMTKMPNHLHHS 60
Query: 61 TQANAILAIEQFEGLLGTHCSPDLLFFLCAMYAPICTIDFQHEPIKPCKSVCERARQGCE 120
TQANAILAIEQFEGLLGTHCSPDLLFFLCAMYAPICTIDFQHEPIKPCKSVCERARQGCE
Sbjct: 61 TQANAILAIEQFEGLLGTHCSPDLLFFLCAMYAPICTIDFQHEPIKPCKSVCERARQGCE 120
Query: 121 PILIKYRHSWPENLACEELPVYDRGVCISPEAIVTADGADFPMDSSNGNCRGASSERCKC 180
PILIKYRHSWPENLACEELPVYDRGVCISPEAIVTADGADFPMDSSNGNCRGASSERCKC
Sbjct: 121 PILIKYRHSWPENLACEELPVYDRGVCISPEAIVTADGADFPMDSSNGNCRGASSERCKC 180
Query: 181 KPIRATQKTYFRNNYNYVIRAKVKEIKTKCHDVTAVVEVKEILKSSLVNIPRDTVNLYTS 240
KPIRATQKTYFRNNYNYVIRAKVKEIKTKCHDVTAVVEVKEILKSSLVNIPRDTVNLYTS
Sbjct: 181 KPIRATQKTYFRNNYNYVIRAKVKEIKTKCHDVTAVVEVKEILKSSLVNIPRDTVNLYTS 240
Query: 241 SGCLCPPLNVNEEYIIMGYEDEERSRLLLVEGSIAEKWKDRLGKKVKRWDMKLRHLGLSK 300
SGCLCPPLNVNEEYIIMGYEDEERSRLLLVEGSIAEKWKDRLGKKVKRWDMKLRHLGLSK
Sbjct: 241 SGCLCPPLNVNEEYIIMGYEDEERSRLLLVEGSIAEKWKDRLGKKVKRWDMKLRHLGLSK 300
Query: 301 SDSSNSDSTQSQKSGRNSNPRQARN 325
SDSSNSDSTQSQKSGRNSNPRQARN
Sbjct: 301 SDSSNSDSTQSQKSGRNSNPRQARN 325
>gi|170784838 secreted frizzled-related protein 4 [Homo sapiens]
Length = 346
Score = 316 bits (809), Expect = 2e-86
Identities = 161/317 (50%), Positives = 212/317 (66%), Gaps = 25/317 (7%)
Query: 16 LLALAALCLLR--VPGARAAACEPVRIPLCKSLPWNMTKMPNHLHHSTQANAILAIEQFE 73
L L ALCL G R A CE VRIP+C+ +PWN+T+MPNHLHHSTQ NAILAIEQ+E
Sbjct: 3 LSILVALCLWLHLALGVRGAPCEAVRIPMCRHMPWNITRMPNHLHHSTQENAILAIEQYE 62
Query: 74 GLLGTHCSPDLLFFLCAMYAPICTIDFQHEPIKPCKSVCERARQGCEPILIKYRHSWPEN 133
L+ +CS L FFLCAMYAPICT++F H+PIKPCKSVC+RAR CEP++ Y HSWPE+
Sbjct: 63 ELVDVNCSAVLRFFLCAMYAPICTLEFLHDPIKPCKSVCQRARDDCEPLMKMYNHSWPES 122
Query: 134 LACEELPVYDRGVCISPEAIVTADGADFPMDSS---------------NGNCRGASSERC 178
LAC+ELPVYDRGVCISPEAIVT D P D + +C+ S +RC
Sbjct: 123 LACDELPVYDRGVCISPEAIVT----DLPEDVKWIDITPDMMVQERPLDVDCKRLSPDRC 178
Query: 179 KCKPIRATQKTYFRNNYNYVIRAKVKEI-KTKCHDVTAVVEVKEILKSSLVNIPRDTVNL 237
KCK ++ T TY NY+YVI AK+K + ++ C++VT VV+VKEI KSS IPR V L
Sbjct: 179 KCKKVKPTLATYLSKNYSYVIHAKIKAVQRSGCNEVTTVVDVKEIFKSS-SPIPRTQVPL 237
Query: 238 YTSSGCLCPPLNVNEEYIIMGYEDEERSRLLLVEGSIAEKWKDRLGKKVKRWDMKLRHLG 297
T+S C CP + +++ +IM Y E RSR++L+E + EKW+D+L K+ +W+ +L+
Sbjct: 238 ITNSSCQCPHILPHQDVLIMCY--EWRSRMMLLENCLVEKWRDQLSKRSIQWEERLQEQR 295
Query: 298 LSKSDSSNSDSTQSQKS 314
+ D + S+ +
Sbjct: 296 RTVQDKKKTAGRTSRSN 312
>gi|27894385 frizzled 5 precursor [Homo sapiens]
Length = 585
Score = 140 bits (354), Expect = 1e-33
Identities = 73/191 (38%), Positives = 106/191 (55%), Gaps = 22/191 (11%)
Query: 6 PGGMLLLRAGLLALAALCLLRVPGARAAACEPVRIPLCKSLPWNMTKMPNHLHHSTQANA 65
P +LLL A L+ AA ++A C+ + +P+C+ + +N+T MPN +H TQ A
Sbjct: 10 PSLLLLLLAQLVGRAAAA------SKAPVCQEITVPMCRGIGYNLTHMPNQFNHDTQDEA 63
Query: 66 ILAIEQFEGLLGTHCSPDLLFFLCAMYAPICTIDFQHEPIKPCKSVCERARQGCEPILIK 125
L + QF L+ CSPDL FFLC+MY PIC D+ H+P+ PC+SVCERA+ GC P++ +
Sbjct: 64 GLEVHQFWPLVEIQCSPDLRFFLCSMYTPICLPDY-HKPLPPCRSVCERAKAGCSPLMRQ 122
Query: 126 YRHSWPENLACEELPVYDRG---VCI--SPEAIVTADGADFP----------MDSSNGNC 170
Y +WPE ++C+ LPV R +C+ + TA FP +S G C
Sbjct: 123 YGFAWPERMSCDRLPVLGRDAEVLCMDYNRSEATTAPPRPFPAKPTLPGPPGAPASGGEC 182
Query: 171 RGASSERCKCK 181
CKC+
Sbjct: 183 PAGGPFVCKCR 193
>gi|13994190 frizzled 8 [Homo sapiens]
Length = 694
Score = 132 bits (331), Expect = 5e-31
Identities = 66/138 (47%), Positives = 88/138 (63%), Gaps = 7/138 (5%)
Query: 8 GMLLLRAGLLALAALCLLRVPGARAA-----ACEPVRIPLCKSLPWNMTKMPNHLHHSTQ 62
G LL LLA AL L R GA AA AC+ + +PLCK + +N T MPN +H TQ
Sbjct: 4 GYLLEVTSLLAALAL-LQRSSGAAAASAKELACQEITVPLCKGIGYNYTYMPNQFNHDTQ 62
Query: 63 ANAILAIEQFEGLLGTHCSPDLLFFLCAMYAPICTIDFQHEPIKPCKSVCERARQGCEPI 122
A L + QF L+ CSPDL FFLC+MY PIC D++ +P+ PC+SVCERA+ GC P+
Sbjct: 63 DEAGLEVHQFWPLVEIQCSPDLKFFLCSMYTPICLEDYK-KPLPPCRSVCERAKAGCAPL 121
Query: 123 LIKYRHSWPENLACEELP 140
+ +Y +WP+ + C+ LP
Sbjct: 122 MRQYGFAWPDRMRCDRLP 139
>gi|4503833 frizzled 7 [Homo sapiens]
Length = 574
Score = 130 bits (327), Expect = 2e-30
Identities = 60/129 (46%), Positives = 84/129 (65%), Gaps = 6/129 (4%)
Query: 35 CEPVRIPLCKSLPWNMTKMPNHLHHSTQANAILAIEQFEGLLGTHCSPDLLFFLCAMYAP 94
C+P+ IPLC + +N T +PN L H+ Q +A L + QF L+ CSP+L FFLC+MYAP
Sbjct: 49 CQPISIPLCTDIAYNQTILPNLLGHTNQEDAGLEVHQFYPLVKVQCSPELRFFLCSMYAP 108
Query: 95 ICTIDFQHEPIKPCKSVCERARQGCEPILIKYRHSWPENLACEELPVYDRG-VCISPEAI 153
+CT+ + I PC+S+CERARQGCE ++ K+ WPE L CE PV+ G +C+
Sbjct: 109 VCTV--LDQAIPPCRSLCERARQGCEALMNKFGFQWPERLRCENFPVHGAGEICVGQN-- 164
Query: 154 VTADGADFP 162
T+DG+ P
Sbjct: 165 -TSDGSGGP 172
>gi|4503827 frizzled 2 [Homo sapiens]
Length = 565
Score = 125 bits (313), Expect = 7e-29
Identities = 54/106 (50%), Positives = 72/106 (67%), Gaps = 2/106 (1%)
Query: 35 CEPVRIPLCKSLPWNMTKMPNHLHHSTQANAILAIEQFEGLLGTHCSPDLLFFLCAMYAP 94
C+P+ IPLC + +N T MPN L H+ Q +A L + QF L+ CSP+L FFLC+MYAP
Sbjct: 39 CQPISIPLCTDIAYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSPELRFFLCSMYAP 98
Query: 95 ICTIDFQHEPIKPCKSVCERARQGCEPILIKYRHSWPENLACEELP 140
+CT+ + I PC+S+CERARQGCE ++ K+ WPE L CE P
Sbjct: 99 VCTV--LEQAIPPCRSICERARQGCEALMNKFGFQWPERLRCEHFP 142
>gi|4503825 frizzled 1 [Homo sapiens]
Length = 647
Score = 124 bits (310), Expect = 1e-28
Identities = 54/115 (46%), Positives = 78/115 (67%), Gaps = 3/115 (2%)
Query: 35 CEPVRIPLCKSLPWNMTKMPNHLHHSTQANAILAIEQFEGLLGTHCSPDLLFFLCAMYAP 94
C+P+ IPLC + +N T MPN L H+ Q +A L + QF L+ CS +L FFLC+MYAP
Sbjct: 116 CQPISIPLCTDIAYNQTIMPNLLGHTNQEDAGLEVHQFYPLVKVQCSAELKFFLCSMYAP 175
Query: 95 ICTIDFQHEPIKPCKSVCERARQGCEPILIKYRHSWPENLACEELPVYDRG-VCI 148
+CT+ + + PC+S+CERARQGCE ++ K+ WP+ L CE+ PV+ G +C+
Sbjct: 176 VCTV--LEQALPPCRSLCERARQGCEALMNKFGFQWPDTLKCEKFPVHGAGELCV 228
>gi|4503835 frizzled 9 [Homo sapiens]
Length = 591
Score = 107 bits (266), Expect = 2e-23
Identities = 57/152 (37%), Positives = 84/152 (55%), Gaps = 3/152 (1%)
Query: 11 LLRAGLLALAALCLLRVPGARAAACEPVRIPLCKSLPWNMTKMPNHLHHSTQANAILAIE 70
LL AG AL G AA C+ V IP+C+ + +N+T+MPN L H++Q A +
Sbjct: 15 LLAAGGAALEIGRFDPERGRGAAPCQAVEIPMCRGIGYNLTRMPNLLGHTSQGEAAAELA 74
Query: 71 QFEGLLGTHCSPDLLFFLCAMYAPICTIDFQHEPIKPCKSVCERARQGCEPILIKYRHSW 130
+F L+ C L FFLC++YAP+CT D PI C+ +CE+AR C PI+ ++ W
Sbjct: 75 EFAPLVQYGCHSHLRFFLCSLYAPMCT-DQVSTPIPACRPMCEQARLRCAPIMEQFNFGW 133
Query: 131 PENLACEELPVYD--RGVCISPEAIVTADGAD 160
P++L C LP + +C+ TA A+
Sbjct: 134 PDSLDCARLPTRNDPHALCMEAPENATAGPAE 165
>gi|6005762 frizzled 10 [Homo sapiens]
Length = 581
Score = 105 bits (261), Expect = 7e-23
Identities = 44/106 (41%), Positives = 68/106 (64%), Gaps = 1/106 (0%)
Query: 35 CEPVRIPLCKSLPWNMTKMPNHLHHSTQANAILAIEQFEGLLGTHCSPDLLFFLCAMYAP 94
C+P+ IP+CK + +NMT+MPN + H Q A + + +F L+ C L FFLC++YAP
Sbjct: 34 CQPIEIPMCKDIGYNMTRMPNLMGHENQREAAIQLHEFAPLVEYGCHGHLRFFLCSLYAP 93
Query: 95 ICTIDFQHEPIKPCKSVCERARQGCEPILIKYRHSWPENLACEELP 140
+CT + PI C+ +CE+AR C PI+ ++ WP++L C +LP
Sbjct: 94 MCT-EQVSTPIPACRVMCEQARLKCSPIMEQFNFKWPDSLDCRKLP 138
>gi|22547161 frizzled 4 [Homo sapiens]
Length = 537
Score = 104 bits (259), Expect = 1e-22
Identities = 56/142 (39%), Positives = 83/142 (58%), Gaps = 5/142 (3%)
Query: 2 VCGSPGGMLLLRAGLLALAALCLLRVPG---ARAAACEPVRIPLCKSLPWNMTKMPNHLH 58
V G+PGG+ L GLL L L G C+P+RI +C++L +N+TKMPN +
Sbjct: 10 VPGAPGGVGL-SLGLLLQLLLLLGPARGFGDEEERRCDPIRISMCQNLGYNVTKMPNLVG 68
Query: 59 HSTQANAILAIEQFEGLLGTHCSPDLLFFLCAMYAPICTIDFQHEPIKPCKSVCERARQG 118
H Q +A L + F L+ CS L FFLC++Y P+CT + + PI PC +C ++
Sbjct: 69 HELQTDAELQLTTFTPLIQYGCSSQLQFFLCSVYVPMCT-EKINIPIGPCGGMCLSVKRR 127
Query: 119 CEPILIKYRHSWPENLACEELP 140
CEP+L ++ +WPE+L C + P
Sbjct: 128 CEPVLKEFGFAWPESLNCSKFP 149
>gi|188528609 secreted frizzled-related protein 5 [Homo sapiens]
Length = 317
Score = 95.9 bits (237), Expect = 4e-20
Identities = 70/265 (26%), Positives = 124/265 (46%), Gaps = 43/265 (16%)
Query: 37 PVRIPLCKSLPWNMTKMPNHLHHSTQANAILAIEQFEGLLGTHCSPDLLFFLCAMYAPIC 96
P +PLC ++ + ++PN L H + A + LL C D FLC+++AP+C
Sbjct: 57 PADLPLCHTVGYKRMRLPNLLEHESLAEVKQQASSWLPLLAKRCHSDTQVFLCSLFAPVC 116
Query: 97 TIDFQHEPIKPCKSVCERARQGCEPILIKYRHSWPENLACEELPVYDRGVCISPE----- 151
PI PC+S+CE R GC P++ Y WPE L C + P+ D +CI+ +
Sbjct: 117 L----DRPIYPCRSLCEAVRAGCAPLMEAYGFPWPEMLHCHKFPL-DNDLCIAVQFGHLP 171
Query: 152 ---AIVTADGADFPMDSSNGNCRGASSERCKCKPIRATQKTYFRNNYNYVIRAKVKEIKT 208
VT A M+ S G + C + ++V++ ++KEIK
Sbjct: 172 ATAPPVTKICAQCEMEHS---ADGLMEQMC---------------SSDFVVKMRIKEIKI 213
Query: 209 KCHD--VTAVVEVKEILKSSLV---NIPRDTVNLYTSSGCLCPPL-NVNEEYIIMGYEDE 262
+ D + + K++LK + + R +++ +GC CP L ++ +++MG + +
Sbjct: 214 ENGDRKLIGAQKKKKLLKPGPLKRKDTKRLVLHMKNGAGCPCPQLDSLAGSFLVMGRKVD 273
Query: 263 ERSRLLLVEGSIAEKWKDRLGKKVK 287
+ L+ V +W D+ K++K
Sbjct: 274 GQLLLMAV-----YRW-DKKNKEMK 292
>gi|8393378 frizzled 3 [Homo sapiens]
Length = 666
Score = 94.7 bits (234), Expect = 1e-19
Identities = 44/117 (37%), Positives = 68/117 (58%), Gaps = 2/117 (1%)
Query: 27 VPGARAAACEPVRIPLCKSLPWNMTKMPNHLHHSTQANAILAIEQFEGLLGTHCSPDLLF 86
+ G +CEP+ + +C+ LP+N T MPN L+H Q A LA+E F ++ CS D
Sbjct: 20 IGGHSLFSCEPITLRMCQDLPYNTTFMPNLLNHYDQQTAALAMEPFHPMVNLDCSRDFRP 79
Query: 87 FLCAMYAPICTIDFQHEPIKPCKSVCERARQGCEPILIKYRHSWPENLACEELPVYD 143
FLCA+YAPIC +++ + PC+ +C+RA C ++ + WPE++ C P D
Sbjct: 80 FLCALYAPIC-MEYGRVTL-PCRRLCQRAYSECSKLMEMFGVPWPEDMECSRFPDCD 134
>gi|56117838 secreted frizzled-related protein 1 [Homo sapiens]
Length = 314
Score = 90.5 bits (223), Expect = 2e-18
Identities = 68/263 (25%), Positives = 120/263 (45%), Gaps = 25/263 (9%)
Query: 37 PVRIPLCKSLPWNMTKMPNHLHHSTQANAILAIEQFEGLLGTHCSPDLLFFLCAMYAPIC 96
P + LC ++ + +PN L H T A + LL +C FLC+++AP+C
Sbjct: 62 PADLRLCHNVGYKKMVLPNLLEHETMAEVKQQASSWVPLLNKNCHAGTQVFLCSLFAPVC 121
Query: 97 TIDFQHEPIKPCKSVCERARQGCEPILIKYRHSWPENLACEELPVYDRGVCISPEAIVTA 156
PI PC+ +CE R CEP++ + WPE L C++ P D VCI A+
Sbjct: 122 L----DRPIYPCRWLCEAVRDSCEPVMQFFGFYWPEMLKCDKFPEGD--VCI---AMTPP 172
Query: 157 DGADFPMDSSNGNCRGASSERCKCKPIRATQKTYFRNNYNYVIRAKVKEIKTKCHDVTAV 216
+ + C +E +++ + +R K+KE+K + D V
Sbjct: 173 NATEASKPQGTTVCPPCDNE------LKSEAIIEHLCASEFALRMKIKEVKKENGDKKIV 226
Query: 217 VEVKEILKSSLV---NIPRDTVNLYTSSGCLCPPL-NVNEEYIIMGYEDEERSRLLLVEG 272
+ K+ LK + ++ + + L + C C L N++ ++IMG + +S+ LL
Sbjct: 227 PKKKKPLKLGPIKKKDLKKLVLYLKNGADCPCHQLDNLSHHFLIMG--RKVKSQYLL--- 281
Query: 273 SIAEKWKDRLGKKVKRWDMKLRH 295
+ KW D+ K+ K + K+++
Sbjct: 282 TAIHKW-DKKNKEFKNFMKKMKN 303
>gi|48475052 secreted frizzled-related protein 2 precursor [Homo
sapiens]
Length = 295
Score = 90.5 bits (223), Expect = 2e-18
Identities = 73/269 (27%), Positives = 124/269 (46%), Gaps = 28/269 (10%)
Query: 6 PGGMLLL----RAGLLALAALCLLRVP--GARAAACEPV--RIPLCKSLPWNMTKMPNHL 57
PG +LLL L + L L P + + C+P+ + LC + + ++PN L
Sbjct: 5 PGSLLLLFLASHCCLGSARGLFLFGQPDFSYKRSNCKPIPANLQLCHGIEYQNMRLPNLL 64
Query: 58 HHSTQANAILAIEQFEGLLGTHCSPDLLFFLCAMYAPICTIDFQHEPIKPCKSVCERARQ 117
H T + + L+ C PD FLC+++AP+C +D E I+PC S+C + +
Sbjct: 65 GHETMKEVLEQAGAWIPLVMKQCHPDTKKFLCSLFAPVC-LDDLDETIQPCHSLCVQVKD 123
Query: 118 GCEPILIKYRHSWPENLACEELPVYDRGVCISPEAIVTADGADFPMDSSNGNCRGASSER 177
C P++ + WP+ L C+ P D +CI + ++D + + C E
Sbjct: 124 RCAPVMSAFGFPWPDMLECDRFP-QDNDLCI---PLASSDHLLPATEEAPKVC-----EA 174
Query: 178 CKCK--PIRATQKTYFRNNYNYVIRAKVKEIKTKCHDVTAVVEVKE--ILKSSLV---NI 230
CK K +T +N ++ ++ KVKEI D ++E K I K + V ++
Sbjct: 175 CKNKNDDDNDIMETLCKN--DFALKIKVKEITYINRDTKIILETKSKTIYKLNGVSERDL 232
Query: 231 PRDTVNLYTSSGCLCPPLN-VNEEYIIMG 258
+ + L S C C +N +N Y++MG
Sbjct: 233 KKSVLWLKDSLQCTCEEMNDINAPYLVMG 261
>gi|29244926 corin [Homo sapiens]
Length = 1042
Score = 90.1 bits (222), Expect = 2e-18
Identities = 44/124 (35%), Positives = 68/124 (54%), Gaps = 5/124 (4%)
Query: 35 CEPVRIPLCKSLPWNMTKMPNHLHHSTQANAILAIEQ--FEGLLGTHCSPDLLFFLCAMY 92
CEP+ + LC +LP+N T PN+ H TQ A ++ E F L+ T+C L+FF C +
Sbjct: 455 CEPITLELCMNLPYNSTSYPNYFGHRTQKEASISWESSLFPALVQTNCYKYLMFFSCTIL 514
Query: 93 APICTIDFQHEPIKPCKSVCERARQGCEPILIKYRHSWPENLACEELPV--YDRGVCISP 150
P C ++ E I PC+++CE +++ CE +L WPE+ C + P D C+ P
Sbjct: 515 VPKCDVN-TGEHIPPCRALCEHSKERCESVLGIVGLQWPEDTDCSQFPEENSDNQTCLMP 573
Query: 151 EAIV 154
+ V
Sbjct: 574 DEYV 577
Score = 55.5 bits (132), Expect = 6e-08
Identities = 35/125 (28%), Positives = 55/125 (44%), Gaps = 7/125 (5%)
Query: 33 AACEPVRIPLCKSLPWNMTKMPNHLHHSTQANAILAIEQFEGLLGTHCSPDLLFFLCAMY 92
+AC + C+ LP++ T P L ++ F L C ++ F C +
Sbjct: 137 SACMNITHSQCQMLPYHATLTPL-LSVVRNMEMEKFLKFFTYLHRLSCYQHIMLFGCTLA 195
Query: 93 APICTIDFQHEP-IKPCKSVCERARQGCEPILIKYRHSWPENLACEELPVYDRG-----V 146
P C ID + PC+S CE A++GCE +L +SWP+ L C + +
Sbjct: 196 FPECIIDGDDSHGLLPCRSFCEAAKEGCESVLGMVNYSWPDFLRCSQFRNQTESSNVSRI 255
Query: 147 CISPE 151
C SP+
Sbjct: 256 CFSPQ 260
>gi|34734079 frizzled 6 [Homo sapiens]
Length = 706
Score = 86.3 bits (212), Expect = 3e-17
Identities = 45/134 (33%), Positives = 67/134 (50%), Gaps = 4/134 (2%)
Query: 16 LLALAALCLLRVPGARAAACEPVRIPLCKSLPWNMTKMPNHLHHSTQANAILAIEQFEGL 75
LL L LLR G CEP+ +P C + +NMT PN + H Q+ A + +E F L
Sbjct: 7 LLTCIFLPLLR--GHSLFTCEPITVPRCMKMAYNMTFFPNLMGHYDQSIAAVEMEHFLPL 64
Query: 76 LGTHCSPDLLFFLCAMYAPICTIDFQHEPIKPCKSVCERARQGCEPILIKYRHSWPENLA 135
CSP++ FLC + P C Q + PC+ +CE+ C+ ++ + WPE L
Sbjct: 65 ANLECSPNIETFLCKAFVPTCI--EQIHVVPPCRKLCEKVYSDCKKLIDTFGIRWPEELE 122
Query: 136 CEELPVYDRGVCIS 149
C+ L D V ++
Sbjct: 123 CDRLQYCDETVPVT 136
>gi|93204871 netrin 4 [Homo sapiens]
Length = 628
Score = 70.9 bits (172), Expect = 1e-12
Identities = 40/117 (34%), Positives = 61/117 (52%), Gaps = 5/117 (4%)
Query: 175 SERCKCKP-IRATQKTYFRNNYNYVIRAKVKEIKTKCHDVTAVVEVKEILKSSLVNIPRD 233
S +C+CK K + Y+YV++ K+ K V V++K++LKS+ + I R
Sbjct: 503 SGKCECKEQTLGNAKAFCGMKYSYVLKIKILSAHDKGTHVEVNVKIKKVLKSTKLKIFRG 562
Query: 234 TVNLY----TSSGCLCPPLNVNEEYIIMGYEDEERSRLLLVEGSIAEKWKDRLGKKV 286
LY T GC CP LN EY++ G+ED +L++ S + WK LG+KV
Sbjct: 563 KRTLYPESWTDRGCTCPILNPGLEYLVAGHEDIRTGKLIVNMKSFVQHWKPSLGRKV 619
>gi|62388877 carboxypeptidase Z isoform 1 [Homo sapiens]
Length = 652
Score = 63.2 bits (152), Expect = 3e-10
Identities = 36/130 (27%), Positives = 56/130 (43%), Gaps = 8/130 (6%)
Query: 26 RVPGARAAACEPVRIPLCKSLPWNMTKMPNHLHHST-----QANAILAIEQFEGLLGTHC 80
R P A +A C +++ C +N T PN L H + ++ + + LL C
Sbjct: 34 RPPAADSATCVDLQLRTCSDAAYNHTTFPNLLQHRSWEVVEASSEYILLSVLHQLLEGQC 93
Query: 81 SPDLLFFLCAMYAPICTIDFQHEPIKPCKSVCERARQGCEPILIKYRHSWPENLACEELP 140
+PDL CA+ AP C + +PC+ +CE R+ C+P +WP L C
Sbjct: 94 NPDLRLLGCAVLAPRCEGGWVR---RPCRHICEGLREVCQPAFDAIDMAWPYFLDCHRYF 150
Query: 141 VYDRGVCISP 150
+ C P
Sbjct: 151 TREDEGCYDP 160
>gi|206597445 alpha 1 type XVIII collagen isoform 3 precursor [Homo
sapiens]
Length = 1751
Score = 62.4 bits (150), Expect = 5e-10
Identities = 40/123 (32%), Positives = 53/123 (43%), Gaps = 7/123 (5%)
Query: 28 PGARAAACEPV--RIPLCKSLPWNMTKMPNHLHHSTQANAILAIEQFEGLLGTHCSPDLL 85
P A A C P+ +P+C L + +PNHLHH + + GLL THC P L
Sbjct: 327 PEAPAGRCLPLPPSLPVCGHLGISRFWLPNHLHHESGEQVRAGARAWGGLLQTHCHPFLA 386
Query: 86 FFLCAMYAPICTIDFQHEPIKPCKSVCERARQGCEPILIKYRHSWPENLACEELPVYDRG 145
+F C + P C P PC CE + C L R +AC LP + G
Sbjct: 387 WFFCLLLVPPCGSVPPPAP-PPCCQFCEALQDACWSRLGGGRLP----VACASLPTQEDG 441
Query: 146 VCI 148
C+
Sbjct: 442 YCV 444
>gi|62388875 carboxypeptidase Z isoform 2 precursor [Homo sapiens]
Length = 641
Score = 60.5 bits (145), Expect = 2e-09
Identities = 41/150 (27%), Positives = 61/150 (40%), Gaps = 8/150 (5%)
Query: 6 PGGMLLLRAGLLALAALCLLRVPGARAAACEPVRIPLCKSLPWNMTKMPNHLHHST---- 61
P LLL L+ AA AA C +++ C +N T PN L H +
Sbjct: 3 PPPPLLLLTVLVVAAARPGCEFERNPAATCVDLQLRTCSDAAYNHTTFPNLLQHRSWEVV 62
Query: 62 -QANAILAIEQFEGLLGTHCSPDLLFFLCAMYAPICTIDFQHEPIKPCKSVCERARQGCE 120
++ + + LL C+PDL CA+ AP C + +PC+ +CE R+ C+
Sbjct: 63 EASSEYILLSVLHQLLEGQCNPDLRLLGCAVLAPRCEGGWVR---RPCRHICEGLREVCQ 119
Query: 121 PILIKYRHSWPENLACEELPVYDRGVCISP 150
P +WP L C + C P
Sbjct: 120 PAFDAIDMAWPYFLDCHRYFTREDEGCYDP 149
>gi|13899255 membrane frizzled-related protein [Homo sapiens]
Length = 579
Score = 60.1 bits (144), Expect = 3e-09
Identities = 37/119 (31%), Positives = 51/119 (42%), Gaps = 6/119 (5%)
Query: 34 ACEPVRIPLCKSLPWNMTKMPN-HLHHSTQANAILAIEQFEGLLGTHCSPDLLFFLCAMY 92
ACEPV++ +C L +N T PN + TQ + + ++ L C LC +
Sbjct: 465 ACEPVQVEMCLGLSYNTTAFPNIWVGMITQEEVVEVLSGYKSLTSLPCYQHFRRLLCGLL 524
Query: 93 APICTIDFQHEPIKPCKSVCERARQGCEPILIKYRHSWPENLACEELP-VYDRGVCISP 150
P CT + PC+SVC+ A C+ L WP N C LP D C P
Sbjct: 525 VPRCTP--LGSVLPPCRSVCQEAEHQCQSGLALLGTPWPFN--CNRLPEAADLEACAQP 579
>gi|5032099 smoothened [Homo sapiens]
Length = 787
Score = 40.8 bits (94), Expect = 0.002
Identities = 31/109 (28%), Positives = 47/109 (43%), Gaps = 8/109 (7%)
Query: 31 RAAACEPVRIPLC--KSLPWNMTKMPNHLHHSTQANAILAIEQFEGLLGT-HCSPDLLFF 87
RAA CEP+R +C LP+ T +Q A + + GL C +
Sbjct: 66 RAAPCEPLRYNVCLGSVLPYGATSTLLAGDSDSQEEAHGKLVLWSGLRNAPRCWAVIQPL 125
Query: 88 LCAMYAPICTIDFQHEPIKPCKSVCERARQGCEPILIKYRHSWPENLAC 136
LCA+Y P C D P +++C+ R C +++ WP+ L C
Sbjct: 126 LCAVYMPKCEND---RVELPSRTLCQATRGPC--AIVERERGWPDFLRC 169
>gi|28212222 WFIKKN2 protein [Homo sapiens]
Length = 576
Score = 38.1 bits (87), Expect = 0.011
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 10/95 (10%)
Query: 175 SERCK-CKPIRATQKTYFRNNYNYVIRAKVKEIKTKCHDVTAVVEVKEILKSSLVNI--- 230
++RC+ CKP + ++ R+++ VI +V E+ + A+V V E+LK + +
Sbjct: 442 NQRCRACKPRQKLVTSFCRSDF--VILGRVSELTEEPDSGRALVTVDEVLKDEKMGLKFL 499
Query: 231 ---PRDTVNLYTSSGCLCPPLNVNE-EYIIMGYED 261
P + L+ C CP + V+E IIMG D
Sbjct: 500 GQEPLEVTLLHVDWACPCPNVTVSEMPLIIMGEVD 534
>gi|148613884 netrin 1 [Homo sapiens]
Length = 604
Score = 32.0 bits (71), Expect = 0.77
Identities = 15/81 (18%), Positives = 42/81 (51%), Gaps = 5/81 (6%)
Query: 217 VEVKEILKSSLVNIPRDTVNLYTSS---GCLCPPLNVNEEYIIMGYEDE--ERSRLLLVE 271
V + + K I R +L+ S C CP + ++Y+++G ++ ++S ++ +
Sbjct: 515 VNIISVYKQGTSRIRRGDQSLWIRSRDIACKCPKIKPLKKYLLLGNAEDSPDQSGIVADK 574
Query: 272 GSIAEKWKDRLGKKVKRWDMK 292
S+ +W+D ++++++ +
Sbjct: 575 SSLVIQWRDTWARRLRKFQQR 595
>gi|239047498 slingshot 1 isoform 3 [Homo sapiens]
Length = 703
Score = 31.2 bits (69), Expect = 1.3
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 7/47 (14%)
Query: 48 WNMTKMPNHLHHSTQANAILAIEQFEGLLGTHCSPDLLFFLCAMYAP 94
W+ +P+H + T A+ + G GT L+FF C ++AP
Sbjct: 651 WHTPSLPSHSNWPTSASVV-------GTTGTRHHTQLIFFYCLLWAP 690
>gi|239047441 slingshot 1 isoform 2 [Homo sapiens]
Length = 692
Score = 31.2 bits (69), Expect = 1.3
Identities = 14/47 (29%), Positives = 23/47 (48%), Gaps = 7/47 (14%)
Query: 48 WNMTKMPNHLHHSTQANAILAIEQFEGLLGTHCSPDLLFFLCAMYAP 94
W+ +P+H + T A+ + G GT L+FF C ++AP
Sbjct: 640 WHTPSLPSHSNWPTSASVV-------GTTGTRHHTQLIFFYCLLWAP 679
>gi|38348368 hypothetical protein LOC374872 [Homo sapiens]
Length = 473
Score = 30.8 bits (68), Expect = 1.7
Identities = 34/126 (26%), Positives = 51/126 (40%), Gaps = 11/126 (8%)
Query: 12 LRAGLLALAALCLLRVPGARAAACEPVRIPLCK-------SLPWNMTKMPNHLHHSTQAN 64
+RA LL A C LR PG+ + EP+ PL K SLP T P+ +
Sbjct: 30 IRAHLLPSKA-CRLRTPGSLSTNPEPLPPPLPKKILTRTQSLPTRRTLHPSSIQVQPPRR 88
Query: 65 AIL---AIEQFEGLLGTHCSPDLLFFLCAMYAPICTIDFQHEPIKPCKSVCERARQGCEP 121
L ++++ + +G C P L F A ++ H P ++ R QG
Sbjct: 89 PFLGSHSVDKSQAAVGPACLPAELTFGPADAPLGLSLRDLHSPEAVHTALAARQLQGLRT 148
Query: 122 ILIKYR 127
I + R
Sbjct: 149 IYARLR 154
>gi|38569407 arylsulfatase B isoform 2 precursor [Homo sapiens]
Length = 413
Score = 30.4 bits (67), Expect = 2.2
Identities = 35/128 (27%), Positives = 48/128 (37%), Gaps = 14/128 (10%)
Query: 6 PGGMLLLRAGLLALAALCLLRVPGARAAACEPVRIP--LCKSLPWNMTKMPNHLHHSTQA 63
PG LL +L L L LL PG+ A A P + L L WN +
Sbjct: 13 PGPRRLLLPVVLPLLLLLLLAPPGSGAGASRPPHLVFLLADDLGWNDVGFHGSRIRTPHL 72
Query: 64 NAILAIEQFEGLLGTH------CSPDLLFFLCAMYAPICTIDFQHEPIKPCKSVCERARQ 117
+A+ A G+L + C+P L Y QH+ I PC+ C +
Sbjct: 73 DALAA----GGVLLDNYYTQPLCTPSRSQLLTGRYQ--IRTGLQHQIIWPCQPSCVPLDE 126
Query: 118 GCEPILIK 125
P L+K
Sbjct: 127 KLLPQLLK 134
>gi|38569405 arylsulfatase B isoform 1 precursor [Homo sapiens]
Length = 533
Score = 30.4 bits (67), Expect = 2.2
Identities = 35/128 (27%), Positives = 48/128 (37%), Gaps = 14/128 (10%)
Query: 6 PGGMLLLRAGLLALAALCLLRVPGARAAACEPVRIP--LCKSLPWNMTKMPNHLHHSTQA 63
PG LL +L L L LL PG+ A A P + L L WN +
Sbjct: 13 PGPRRLLLPVVLPLLLLLLLAPPGSGAGASRPPHLVFLLADDLGWNDVGFHGSRIRTPHL 72
Query: 64 NAILAIEQFEGLLGTH------CSPDLLFFLCAMYAPICTIDFQHEPIKPCKSVCERARQ 117
+A+ A G+L + C+P L Y QH+ I PC+ C +
Sbjct: 73 DALAA----GGVLLDNYYTQPLCTPSRSQLLTGRYQ--IRTGLQHQIIWPCQPSCVPLDE 126
Query: 118 GCEPILIK 125
P L+K
Sbjct: 127 KLLPQLLK 134
>gi|239753948 PREDICTED: hypothetical protein [Homo sapiens]
Length = 131
Score = 29.3 bits (64), Expect = 5.0
Identities = 14/22 (63%), Positives = 16/22 (72%)
Query: 16 LLALAALCLLRVPGARAAACEP 37
L A+ A+C RVPGARAAA P
Sbjct: 70 LPAIRAVCGARVPGARAAAAPP 91
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.135 0.421
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,107,816
Number of Sequences: 37866
Number of extensions: 581374
Number of successful extensions: 1438
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 1385
Number of HSP's gapped (non-prelim): 39
length of query: 325
length of database: 18,247,518
effective HSP length: 102
effective length of query: 223
effective length of database: 14,385,186
effective search space: 3207896478
effective search space used: 3207896478
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.