Search of human proteins with 38454194

Search of human proteins with 38454194

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|38454194 tubulin, gamma complex associated protein 4 [Homo
sapiens]
         (666 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|38454194 tubulin, gamma complex associated protein 4 [Homo sa...  1335   0.0  
gi|5729840 tubulin, gamma complex associated protein 2 [Homo sap...    98   2e-20
gi|5453660 tubulin, gamma complex associated protein 3 [Homo sap...    94   5e-19
gi|56788364 tubulin, gamma complex associated protein 6 [Homo sa...    84   4e-16
gi|156616299 tubulin, gamma complex associated protein 5 isoform...    49   2e-05
gi|156616297 tubulin, gamma complex associated protein 5 isoform...    49   2e-05
gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]     39   0.015
gi|89357932 keratin 5b [Homo sapiens]                                  33   0.85 
gi|148612801 KIAA1009 protein [Homo sapiens]                           32   1.9  
gi|55749932 desmin [Homo sapiens]                                      31   3.2  
gi|40316944 adenylosuccinate synthase like 1 isoform 1 [Homo sap...    31   4.2  
gi|22748717 adenylosuccinate synthase like 1 isoform 2 [Homo sap...    31   4.2  
gi|45504371 family with sequence similarity 9, member B [Homo sa...    30   5.5  
gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]     30   5.5  
gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]      30   5.5  
gi|190194355 p90 autoantigen [Homo sapiens]                            30   7.2  
gi|157676320 SH3-binding domain kinase family, member 2 [Homo sa...    30   7.2  
gi|110347568 centrosomal protein 152kDa [Homo sapiens]                 30   7.2  
gi|74959747 Fanconi anemia, complementation group M [Homo sapiens]     30   9.4  

>gi|38454194 tubulin, gamma complex associated protein 4 [Homo
           sapiens]
          Length = 666

 Score = 1335 bits (3454), Expect = 0.0
 Identities = 666/666 (100%), Positives = 666/666 (100%)

Query: 1   MIHELLLALSGYPGSIFTWNKRSGLQVSQDFPFLHPSETSVLNRLCRLGTDYIRFTEFIE 60
           MIHELLLALSGYPGSIFTWNKRSGLQVSQDFPFLHPSETSVLNRLCRLGTDYIRFTEFIE
Sbjct: 1   MIHELLLALSGYPGSIFTWNKRSGLQVSQDFPFLHPSETSVLNRLCRLGTDYIRFTEFIE 60

Query: 61  QYTGHVQQQDHHPSQQGQGGLHGIYLRAFCTGLDSVLQPYRQALLDLEQEFLGDPHLSIS 120
           QYTGHVQQQDHHPSQQGQGGLHGIYLRAFCTGLDSVLQPYRQALLDLEQEFLGDPHLSIS
Sbjct: 61  QYTGHVQQQDHHPSQQGQGGLHGIYLRAFCTGLDSVLQPYRQALLDLEQEFLGDPHLSIS 120

Query: 121 HVNYFLDQFQLLFPSVMVVVEQIKSQKIHGCQILETVYKHSCGGLPPVRSALEKILAVCH 180
           HVNYFLDQFQLLFPSVMVVVEQIKSQKIHGCQILETVYKHSCGGLPPVRSALEKILAVCH
Sbjct: 121 HVNYFLDQFQLLFPSVMVVVEQIKSQKIHGCQILETVYKHSCGGLPPVRSALEKILAVCH 180

Query: 181 GVMYKQLSAWMLHGLLLDQHEEFFIKQGPSSGNVSAQPEEDEEDLGIGGLTGKQLRELQD 240
           GVMYKQLSAWMLHGLLLDQHEEFFIKQGPSSGNVSAQPEEDEEDLGIGGLTGKQLRELQD
Sbjct: 181 GVMYKQLSAWMLHGLLLDQHEEFFIKQGPSSGNVSAQPEEDEEDLGIGGLTGKQLRELQD 240

Query: 241 LRLIEEENMLAPSLKQFSLRVEILPSYIPVRVAEKILFVGESVQMFENQNVNLTRKGSIL 300
           LRLIEEENMLAPSLKQFSLRVEILPSYIPVRVAEKILFVGESVQMFENQNVNLTRKGSIL
Sbjct: 241 LRLIEEENMLAPSLKQFSLRVEILPSYIPVRVAEKILFVGESVQMFENQNVNLTRKGSIL 300

Query: 301 KNQEDTFAAELHRLKQQPLFSLVDFEQVVDRIRSTVAEHLWKLMVEESDLLGQLKIIKDF 360
           KNQEDTFAAELHRLKQQPLFSLVDFEQVVDRIRSTVAEHLWKLMVEESDLLGQLKIIKDF
Sbjct: 301 KNQEDTFAAELHRLKQQPLFSLVDFEQVVDRIRSTVAEHLWKLMVEESDLLGQLKIIKDF 360

Query: 361 YLLGRGELFQAFIDTAQHMLKTPPTAVTEHDVNVAFQQSAHKVLLDDDNLLPLLHLTIEY 420
           YLLGRGELFQAFIDTAQHMLKTPPTAVTEHDVNVAFQQSAHKVLLDDDNLLPLLHLTIEY
Sbjct: 361 YLLGRGELFQAFIDTAQHMLKTPPTAVTEHDVNVAFQQSAHKVLLDDDNLLPLLHLTIEY 420

Query: 421 HGKEHKDATQAREGPSRETSPREAPASGWAALGLSYKVQWPLHILFTPAVLEKYNVVFKY 480
           HGKEHKDATQAREGPSRETSPREAPASGWAALGLSYKVQWPLHILFTPAVLEKYNVVFKY
Sbjct: 421 HGKEHKDATQAREGPSRETSPREAPASGWAALGLSYKVQWPLHILFTPAVLEKYNVVFKY 480

Query: 481 LLSVRRVQAELQHCWALQMQRKHLKSNQTDAIKWRLRNHMAFLVDNLQYYLQVDVLESQF 540
           LLSVRRVQAELQHCWALQMQRKHLKSNQTDAIKWRLRNHMAFLVDNLQYYLQVDVLESQF
Sbjct: 481 LLSVRRVQAELQHCWALQMQRKHLKSNQTDAIKWRLRNHMAFLVDNLQYYLQVDVLESQF 540

Query: 541 SQLLHQINSTRDFESIRLAHDHFLSNLLAQSFILLKPVFHCLNEILDLCHSFCSLVSQNL 600
           SQLLHQINSTRDFESIRLAHDHFLSNLLAQSFILLKPVFHCLNEILDLCHSFCSLVSQNL
Sbjct: 541 SQLLHQINSTRDFESIRLAHDHFLSNLLAQSFILLKPVFHCLNEILDLCHSFCSLVSQNL 600

Query: 601 GPLDERGAAQLSILVKGFSRQSSLLFKILSSVRNHQINSDLAQLLLRLDYNKYYTQAGGT 660
           GPLDERGAAQLSILVKGFSRQSSLLFKILSSVRNHQINSDLAQLLLRLDYNKYYTQAGGT
Sbjct: 601 GPLDERGAAQLSILVKGFSRQSSLLFKILSSVRNHQINSDLAQLLLRLDYNKYYTQAGGT 660

Query: 661 LGSFGM 666
           LGSFGM
Sbjct: 661 LGSFGM 666


>gi|5729840 tubulin, gamma complex associated protein 2 [Homo
           sapiens]
          Length = 902

 Score = 98.2 bits (243), Expect = 2e-20
 Identities = 123/624 (19%), Positives = 238/624 (38%), Gaps = 102/624 (16%)

Query: 1   MIHELLLALSGYPGSIFTWNKRSGLQVSQDF---PFLHPSETSVLNRLCRLGTDYIRFTE 57
           ++ +LL  L G  G   +    +G Q S+ F   P L  S   +++R+  +   Y   T 
Sbjct: 217 VVEDLLYVLVGVDGRYVSAQPLAGRQ-SRTFLVDPNLDLSIRELVHRILPVAASYSAVTR 275

Query: 58  FIEQYTGHVQQQDHHPSQQGQGGLHGIYLRAFCTGLDSVLQPYRQALLDLEQEFLGDPHL 117
           FIE+ +     Q +H        L    ++     +  + Q +RQ LL L++ +      
Sbjct: 276 FIEEKSSFEYGQVNHALAAAMRTL----VKEHLILVSQLEQLHRQGLLSLQKLW------ 325

Query: 118 SISHVNYFLDQFQLLFPSVMVVVEQIKSQKIHGCQILETVYKHSCG--GLPPVRSALEKI 175
                 +++         +  +   +   +  G   L  ++  S    G    +     +
Sbjct: 326 ------FYIQPAMRTMDILASLATSVDKGECLGGSTLSLLHDRSFSYTGDSQAQELCLYL 379

Query: 176 LAVCHGVMYKQLSAWMLHGLLLDQHEEFFIKQGPSSGNVSAQPEEDEEDLGIGGLTGKQL 235
                   ++ L  W+  G++ D + EF +++                            
Sbjct: 380 TKAASAPYFEVLEKWIYRGIIHDPYSEFMVEE---------------------------- 411

Query: 236 RELQDLRLIEEENMLAPSLKQFSLRVEILPSYIPV---RVAEKILFVGESVQMFENQNVN 292
            EL+  R+ E+ N      K +  R  I+   IP    ++A+KIL  G+ + +      +
Sbjct: 412 HELRKERIQEDYND-----KYWDQRYTIVQQQIPSFLQKMADKILSTGKYLNVVRECGHD 466

Query: 293 LT---RKGSILKNQEDTFAAELHRLKQQPLFSLVDFEQVVDRIRSTVAEHLWKLMVEESD 349
           +T    K  I   +E  +  ++ +        L+DF                  ++EE +
Sbjct: 467 VTCPVAKEIIYTLKERAYVEQIEKAFNYASKVLLDF------------------LMEEKE 508

Query: 350 LLGQLKIIKDFYLLGRGELFQAFIDTAQHMLKTPPTAVT----EHDVNVAFQQSAH---- 401
           L+  L+ IK ++L+ +G+ F  F+D A+  L+ P   +T    E  + +A + S      
Sbjct: 509 LVAHLRSIKRYFLMDQGDFFVHFMDLAEEELRKPVEDITPPRLEALLELALRMSTANTDP 568

Query: 402 -----KVLLDDDNLLPLLHLTIEYHGKEHKDATQAREGPSRETSPREAPASGWAALGLSY 456
                K+ L   +L+  L   +    K+ K    A         P E   SG  A    Y
Sbjct: 569 FKDDLKIDLMPHDLITQLLRVLAIETKQEKAMAHA--------DPTELALSGLEAFSFDY 620

Query: 457 KVQWPLHILFTPAVLEKYNVVFKYLLSVRRVQAELQHCWALQMQRKH--LKSNQTDAIKW 514
            V+WPL ++     L +Y ++F+++   + V+ +L   W      K   L S Q  A  +
Sbjct: 621 IVKWPLSLIINRKALTRYQMLFRHMFYCKHVERQLCSVWISNKTAKQHSLHSAQWFAGAF 680

Query: 515 RLRNHMAFLVDNLQYYLQVDVLESQFSQLLHQINSTRDFESIRLAHDHFLSNLLAQSFIL 574
            LR  M   V N+QYY+  +V+E  +  L   + S  + + +   H  FL   L    + 
Sbjct: 681 TLRQRMLNFVQNIQYYMMFEVMEPTWHILEKNLKSASNIDDVLGHHTGFLDTCLKDCMLT 740

Query: 575 LKPVFHCLNEILDLCHSFCSLVSQ 598
              +    ++++ +C  F + + +
Sbjct: 741 NPELLKVFSKLMSVCVMFTNCMQK 764


>gi|5453660 tubulin, gamma complex associated protein 3 [Homo
           sapiens]
          Length = 907

 Score = 93.6 bits (231), Expect = 5e-19
 Identities = 107/550 (19%), Positives = 225/550 (40%), Gaps = 90/550 (16%)

Query: 83  GIYLRAFCTGLDSVLQPYRQALLDLEQEF---------LG-DPHLSISHVNYFLDQFQLL 132
           G+  ++FC  L   L+ Y + L  L  +          LG +  L++  +  +    ++ 
Sbjct: 318 GLVGQSFCAALHQELREYYRLLSVLHSQLQLEDDQGVNLGLESSLTLRRLLVWTYDPKIR 377

Query: 133 FPSVMVVVEQIKSQKIHGCQILETVYKHSCGGLPPVRSALEKILAVCHGVMYKQLSAWML 192
             ++  +V+  + +K  G ++   V+ ++  G P +RS ++ IL++    +   L  W+ 
Sbjct: 378 LKTLAALVDHCQGRK--GGELASAVHAYTKTGDPYMRSLVQHILSLVSHPVLSFLYRWIY 435

Query: 193 HGLLLDQHEEFFIKQGPSSGNVSAQPEEDEEDLGIGGLTGKQLRELQDLRLIEEENMLAP 252
            G L D + EFF+   P                     T K  R   D            
Sbjct: 436 DGELEDTYHEFFVASDP---------------------TVKTDRLWHD------------ 462

Query: 253 SLKQFSLRVEILPSYIPVRVAEKILFVGESVQMFE---NQNVNLTRKGSILKNQEDTFAA 309
              +++LR  ++PS++ +  + K+L +G+S+       +     T+  ++ K+ E    A
Sbjct: 463 ---KYTLRKSMIPSFMTMDQSRKVLLIGKSINFLHQVCHDQTPTTKMIAVTKSAESPQDA 519

Query: 310 ELHRLKQQPLFSLVD--FEQVVDRIRSTVAEHLWKLMVEESDLLGQLKIIKDFYLLGRGE 367
                    LF+ ++  F+  +D      +++L  ++ ++  LL  ++ ++ + LLG+G+
Sbjct: 520 A-------DLFTDLENAFQGKIDAAYFETSKYLLDVLNKKYSLLDHMQAMRRYLLLGQGD 572

Query: 368 LFQAFIDTAQHMLKTPPTAVTEHDVNVAFQQSAHKVLLDDDNLLPLLHLTIEYHGKEHKD 427
             +  +D  +  L  P T + +H++    + +        D+   L  L +         
Sbjct: 573 FIRHLMDLLKPELVRPATTLYQHNLTGILETAVRATNAQFDSPEILRRLDVRL------- 625

Query: 428 ATQAREGPSRETSPREAPASGWAALGLSYKVQWPLHILFTPAVLEKYNVVFKYLLSVRRV 487
                     E SP +   +GW    L Y V  P+  +FT   +  Y  VF +L   +R+
Sbjct: 626 ---------LEVSPGD---TGWDVFSLDYHVDGPIATVFTRECMSHYLRVFNFLWRAKRM 673

Query: 488 QAELQHCWALQMQRKHLKSNQTDAIKWR-----LRNHMAFLVDNLQYYLQVDVLESQFSQ 542
           +  L       M    L  N  +          L + M   +  +QYY+  +VLE  + +
Sbjct: 674 EYILTDIRKGHMCNAKLLRNMPEFSGVLHQCHILASEMVHFIHQMQYYITFEVLECSWDE 733

Query: 543 LLHQINSTRDFESIRLAHDHFLSNLLAQSFI------LLKPVFHCLNEILDLCHSFCSLV 596
           L +++   +D + I  AH+ FL  ++++  +      LL  +    ++I++L ++  ++ 
Sbjct: 734 LWNKVQQAQDLDHIIAAHEVFLDTIISRCLLDSDSRALLNQLRAVFDQIIELQNAQDAIY 793

Query: 597 SQNLGPLDER 606
              L  L  R
Sbjct: 794 RAALEELQRR 803


>gi|56788364 tubulin, gamma complex associated protein 6 [Homo
            sapiens]
          Length = 1819

 Score = 84.0 bits (206), Expect = 4e-16
 Identities = 63/221 (28%), Positives = 106/221 (47%), Gaps = 14/221 (6%)

Query: 450  AALGLSYKVQWPLHILFTPAVLEKYNVVFKYLLSVRRVQAELQHCWALQMQRKHLKSNQT 509
            + L L YKV WPL+I+ T   L KY+ VF +LL ++ +   L+      ++R  L S+  
Sbjct: 1600 SCLELRYKVDWPLNIVITEGCLSKYSGVFSFLLQLKLMMWALKDV-CFHLKRTALLSHMA 1658

Query: 510  DAIKWR----LRNHMAFLVDNLQYYLQVDVLESQFSQLLHQINSTRDFESIRLAHDHFLS 565
             ++++R     ++ M   V  +Q Y+   +L   + +   ++ +  D E I+ AH  +L 
Sbjct: 1659 GSVQFRQLQLFKHEMQHFVKVIQGYIANQILHVTWCEFRARLATVGDLEEIQRAHAEYLH 1718

Query: 566  NLLAQSFILLK--PVFHCLNEILDLCHSFCS-LVSQNLGPL-DERGA-----AQLSILVK 616
              + +  +  K  PV + ++ I  L   F S L+SQ  GP    RGA     A +     
Sbjct: 1719 KAVFRGLLTEKAAPVMNVIHSIFSLVLKFRSQLISQAWGPPGGPRGAEHPNFALMQQSYN 1778

Query: 617  GFSRQSSLLFKILSSVRNHQINSDLAQLLLRLDYNKYYTQA 657
             F   S  LFK+++ + N      L   LLR+++N YY  A
Sbjct: 1779 TFKYYSHFLFKVVTKLVNRGYQPHLEDFLLRINFNNYYQDA 1819


>gi|156616299 tubulin, gamma complex associated protein 5 isoform b
           [Homo sapiens]
          Length = 1024

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 54/288 (18%), Positives = 115/288 (39%), Gaps = 44/288 (15%)

Query: 339 HLWKLMVEESDLLGQLKIIKDFYLLGRGELFQAFIDTAQHMLKTPPTAVTEHDVNVAFQQ 398
           +L + + ++  L+  L+ +++F+L+  G+    F  +    ++   T      +NV  Q+
Sbjct: 705 NLMQTLKKDYRLVEYLQAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQE 764

Query: 399 SAHKVLLDDDNLLPLLHLTIEYHGKEHKDATQAREGPSRETSPREAPASGWAALGLSYKV 458
           +  +   +D + L +    ++                   T+ ++ P      L LSYKV
Sbjct: 765 AVGQRYPEDSSRLSISFENVD-------------------TAKKKLPVHILDGLTLSYKV 805

Query: 459 QWPLHILFTPAVLEKYNVVFKYLLSVRRVQAELQHCWALQM----QRKHLKS---NQTDA 511
            WP+ I+ +    + YN VF  LL ++  +  L      ++    ++  LK    ++ D 
Sbjct: 806 PWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDVLLFGELVSTAEKPRLKEGLIHEQDT 865

Query: 512 I----------------KWRLRNHMAFLVDNLQYYLQVDVLESQFSQLLHQINSTRDFES 555
           +                 + LR  +   V++L  Y+   +L S   +  HQ+   +D + 
Sbjct: 866 VAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNYIMTRILHSTGLEFQHQVEEAKDLDQ 925

Query: 556 IRLAHDHFLSNLLAQSFILLKPVF--HCLNEILDLCHSFCSLVSQNLG 601
           +   H  +LS +  +  +  K  F    + ++L+L   F       LG
Sbjct: 926 LIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNLALMFADGWQAGLG 973


>gi|156616297 tubulin, gamma complex associated protein 5 isoform a
           [Homo sapiens]
          Length = 1024

 Score = 48.5 bits (114), Expect = 2e-05
 Identities = 54/288 (18%), Positives = 115/288 (39%), Gaps = 44/288 (15%)

Query: 339 HLWKLMVEESDLLGQLKIIKDFYLLGRGELFQAFIDTAQHMLKTPPTAVTEHDVNVAFQQ 398
           +L + + ++  L+  L+ +++F+L+  G+    F  +    ++   T      +NV  Q+
Sbjct: 705 NLMQTLKKDYRLVEYLQAMRNFFLMEGGDTMYDFYTSIFDKIREKETWQNVSFLNVQLQE 764

Query: 399 SAHKVLLDDDNLLPLLHLTIEYHGKEHKDATQAREGPSRETSPREAPASGWAALGLSYKV 458
           +  +   +D + L +    ++                   T+ ++ P      L LSYKV
Sbjct: 765 AVGQRYPEDSSRLSISFENVD-------------------TAKKKLPVHILDGLTLSYKV 805

Query: 459 QWPLHILFTPAVLEKYNVVFKYLLSVRRVQAELQHCWALQM----QRKHLKS---NQTDA 511
            WP+ I+ +    + YN VF  LL ++  +  L      ++    ++  LK    ++ D 
Sbjct: 806 PWPVDIVISLECQKIYNQVFLLLLQIKWAKYSLDVLLFGELVSTAEKPRLKEGLIHEQDT 865

Query: 512 I----------------KWRLRNHMAFLVDNLQYYLQVDVLESQFSQLLHQINSTRDFES 555
           +                 + LR  +   V++L  Y+   +L S   +  HQ+   +D + 
Sbjct: 866 VAQFGPQKEPVRQQIHRMFLLRVKLMHFVNSLHNYIMTRILHSTGLEFQHQVEEAKDLDQ 925

Query: 556 IRLAHDHFLSNLLAQSFILLKPVF--HCLNEILDLCHSFCSLVSQNLG 601
           +   H  +LS +  +  +  K  F    + ++L+L   F       LG
Sbjct: 926 LIKIHYRYLSTIHDRCLLREKVSFVKEAIMKVLNLALMFADGWQAGLG 973


>gi|6715600 golgi autoantigen, golgin subfamily a, 4 [Homo sapiens]
          Length = 2230

 Score = 38.9 bits (89), Expect = 0.015
 Identities = 37/162 (22%), Positives = 71/162 (43%), Gaps = 7/162 (4%)

Query: 296 KGSILKNQEDTFAAELHRLKQQPLFSLVDFEQVVDRIRSTVAEHLWKLMVEESDLLGQLK 355
           K ++LK++E  F A +  + ++ L  L   +  ++ + S ++E    ++     L  +L 
Sbjct: 653 KETLLKDKEIIFQAHIEEMNEKTLEKLDVKQTELESLSSELSE----VLKARHKLEEELS 708

Query: 356 IIKDFYLLGRGELFQAFIDTAQHMLKTPPTAVTEHDVNVAFQQSAHKVLLDDDNLLPLLH 415
           ++KD     + EL     +   H  +   + + EH+V++   Q   K L D  N L LL 
Sbjct: 709 VLKDQTDKMKQELEAKMDEQKNHHQQQVDSIIKEHEVSI---QRTEKALKDQINQLELLL 765

Query: 416 LTIEYHGKEHKDATQAREGPSRETSPREAPASGWAALGLSYK 457
              + H KEH+   +  E   + +      AS    +  SY+
Sbjct: 766 KERDKHLKEHQAHVENLEADIKRSEGELQQASAKLDVFQSYQ 807


>gi|89357932 keratin 5b [Homo sapiens]
          Length = 520

 Score = 33.1 bits (74), Expect = 0.85
 Identities = 30/114 (26%), Positives = 48/114 (42%), Gaps = 12/114 (10%)

Query: 247 ENMLAPSLKQFSLRVEILPSYIPVRVAEKILFVGESVQMFENQNVNLTRKGSILKNQEDT 306
           +N+L P      L++EI P +  VR  E      + ++   NQ  +   K   L+ Q   
Sbjct: 90  QNLLTP------LKIEIDPQFQVVRTQET-----QEIRTLNNQFASFIDKVRFLEQQNKV 138

Query: 307 FAAELHRLKQQPLF-SLVDFEQVVDRIRSTVAEHLWKLMVEESDLLGQLKIIKD 359
              + H L+QQ L  S    E V +     + + L +L  E   L  +LK  +D
Sbjct: 139 LETKWHLLQQQGLSGSQQGLEPVFEACLDQLRKQLEQLQGERGALDAELKACRD 192


>gi|148612801 KIAA1009 protein [Homo sapiens]
          Length = 1403

 Score = 32.0 bits (71), Expect = 1.9
 Identities = 29/122 (23%), Positives = 53/122 (43%), Gaps = 11/122 (9%)

Query: 234 QLRELQDLRLIEEENMLAPSLKQFSLRVEILPSYIPVRVAEKILFVGESVQMFENQN-VN 292
           Q+++LQ+     EE M   +   FS    +       R   +++   E  +   NQN  +
Sbjct: 730 QVKDLQEQNKKNEERMFKENQSLFSEVASLKEQMHKSRFLSQVV---EDSEPTRNQNFTD 786

Query: 293 LTRKGSILKNQEDTFAAELHRLKQQPLFSLVDFE-------QVVDRIRSTVAEHLWKLMV 345
           L  +  + + ++D+   ++ RLKQ      VDFE       Q  D+I     E L+++ +
Sbjct: 787 LLAELRMAQKEKDSLLEDIKRLKQDKQALEVDFEKMKKERDQAKDQIAYVTGEKLYEIKI 846

Query: 346 EE 347
            E
Sbjct: 847 LE 848


>gi|55749932 desmin [Homo sapiens]
          Length = 470

 Score = 31.2 bits (69), Expect = 3.2
 Identities = 43/164 (26%), Positives = 63/164 (38%), Gaps = 21/164 (12%)

Query: 204 FIKQGPSSGNVSAQPEEDEEDLGIGGLTGKQLRELQDLRLIEEENMLAPSLKQFSLRVEI 263
           F  +G SS   S   +      G GGL   +   L   R        A  L  FSL   +
Sbjct: 40  FGSKGSSSSVTSRVYQVSRTSGGAGGLGSLRASRLGTTRTPSSYG--AGELLDFSLADAV 97

Query: 264 LPSYIPVRVAEKILFVG---------ESVQMFENQNVNLTRKGSILKNQEDTFAAELHRL 314
              ++  R  EK+             E V+  E QN  L  + + LK +E T  AEL+  
Sbjct: 98  NQEFLTTRTNEKVELQELNDRFANYIEKVRFLEQQNAALAAEVNRLKGREPTRVAELY-- 155

Query: 315 KQQPLFSLVDFEQVVDRIRSTVAEHLWKLMVEESDLLGQLKIIK 358
            ++ L  L    +V+   R+ V        VE  +LL  L+ +K
Sbjct: 156 -EEELRELRRQVEVLTNQRARVD-------VERDNLLDDLQRLK 191


>gi|40316944 adenylosuccinate synthase like 1 isoform 1 [Homo
           sapiens]
          Length = 500

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 5/77 (6%)

Query: 284 QMFENQNVNLTRKGSILKNQEDTFAAELHRLKQQPLFSLVDFEQVVDRIRSTVAEHLWKL 343
           Q  E +N+  T+KG        T++++  R   +    L DF++   R ++   +H    
Sbjct: 196 QAQEGKNIGTTKKGI-----GPTYSSKAARTGLRICDLLSDFDEFSSRFKNLAHQHQSMF 250

Query: 344 MVEESDLLGQLKIIKDF 360
              E D+ GQLK +K F
Sbjct: 251 PTLEIDIEGQLKRLKGF 267


>gi|22748717 adenylosuccinate synthase like 1 isoform 2 [Homo
           sapiens]
          Length = 457

 Score = 30.8 bits (68), Expect = 4.2
 Identities = 21/77 (27%), Positives = 36/77 (46%), Gaps = 5/77 (6%)

Query: 284 QMFENQNVNLTRKGSILKNQEDTFAAELHRLKQQPLFSLVDFEQVVDRIRSTVAEHLWKL 343
           Q  E +N+  T+KG        T++++  R   +    L DF++   R ++   +H    
Sbjct: 153 QAQEGKNIGTTKKGI-----GPTYSSKAARTGLRICDLLSDFDEFSSRFKNLAHQHQSMF 207

Query: 344 MVEESDLLGQLKIIKDF 360
              E D+ GQLK +K F
Sbjct: 208 PTLEIDIEGQLKRLKGF 224


>gi|45504371 family with sequence similarity 9, member B [Homo
           sapiens]
          Length = 186

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 36/154 (23%), Positives = 66/154 (42%), Gaps = 26/154 (16%)

Query: 198 DQH--EEFFIKQGPSSGNVSAQPEEDEEDLGIGGLTGKQLRELQDLRLIEEENMLAPSLK 255
           D+H   E F +    +G  + +PE+  EDL     T K+ R   D    + +N    +L+
Sbjct: 34  DEHGEREPFAETDEHTGANTKKPEDTAEDL-----TAKRKRMKMDKTCSKTKNKSKHALR 88

Query: 256 QFSLR------------VEILPSYIPVRVAEKILFVGES---VQMFENQNVNLTRKGSIL 300
           +  L+            + +L  YI     E+    GE    +++F+ Q     +  S+ 
Sbjct: 89  KKQLKRQKRDYIHSLKLLNVLEEYITDEQKEEEEEEGEEEELIRIFQEQQKKWQQYRSVR 148

Query: 301 KNQEDTFAAELHRLKQQPLFSLVDFEQVVDRIRS 334
           + +      E+  L+ Q + +L DFE + DR+ S
Sbjct: 149 RER----LKEMKLLRDQFVKALEDFEDLCDRVFS 178


>gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]
          Length = 1113

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 1/72 (1%)

Query: 397 QQSAHKVLLDDDNLLPLLHLTIEYHGKEHKDATQAREGPSRETSPREAPASGWAALGLSY 456
           Q++  K LL    L P      E HG     AT+ R  PS + +P  A     A L    
Sbjct: 287 QRAREKELLAAKALEPSFLPVAELHGLRGH-ATEERGKPSEQLTPTRAEKLKDAGLQAPK 345

Query: 457 KVQWPLHILFTP 468
            VQ PLH + TP
Sbjct: 346 PVQHPLHPVPTP 357


>gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]
          Length = 1217

 Score = 30.4 bits (67), Expect = 5.5
 Identities = 25/72 (34%), Positives = 31/72 (43%), Gaps = 1/72 (1%)

Query: 397 QQSAHKVLLDDDNLLPLLHLTIEYHGKEHKDATQAREGPSRETSPREAPASGWAALGLSY 456
           Q++  K LL    L P      E HG     AT+ R  PS + +P  A     A L    
Sbjct: 391 QRAREKELLAAKALEPSFLPVAELHGLRGH-ATEERGKPSEQLTPTRAEKLKDAGLQAPK 449

Query: 457 KVQWPLHILFTP 468
            VQ PLH + TP
Sbjct: 450 PVQHPLHPVPTP 461


>gi|190194355 p90 autoantigen [Homo sapiens]
          Length = 905

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 27/126 (21%), Positives = 49/126 (38%), Gaps = 2/126 (1%)

Query: 538 SQFSQLLHQINSTRDFESIRLAHDHFLSNLLAQSFILLKPVFHCLNEILDLCHSFCSLVS 597
           SQ+  +  + N+T+    + +     L+ L   + IL      CL E+L+  +   SL+ 
Sbjct: 15  SQYKAVKSEANATQLLRHLEVISGQKLTRLFTSNQILTSECLSCLVELLEDPNISASLIL 74

Query: 598 QNLGPLDERGA--AQLSILVKGFSRQSSLLFKILSSVRNHQINSDLAQLLLRLDYNKYYT 655
             +G L +          L   ++  S L   +  S     +     QLL +L YN    
Sbjct: 75  SIIGLLSQLAVDIETRDCLQNTYNLNSVLAGVVCRSSHTDSVFLQCIQLLQKLTYNVKIF 134

Query: 656 QAGGTL 661
            +G  +
Sbjct: 135 YSGANI 140


>gi|157676320 SH3-binding domain kinase family, member 2 [Homo
           sapiens]
          Length = 348

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 6/66 (9%)

Query: 206 KQGPSSGNVSAQPEEDEEDLGIGGLTGKQLRELQDLRLIEEENMLAPSLKQFSLRVEILP 265
           ++GP+    S    ED E+ G+GGLT ++L++ Q+     E+ M   +  Q  +R E+  
Sbjct: 7   EEGPAEAGAS----EDSEEEGLGGLTLEELQQGQEAARALEDMMTLSA--QTLVRAEVDE 60

Query: 266 SYIPVR 271
            Y  VR
Sbjct: 61  LYEEVR 66


>gi|110347568 centrosomal protein 152kDa [Homo sapiens]
          Length = 1654

 Score = 30.0 bits (66), Expect = 7.2
 Identities = 41/164 (25%), Positives = 69/164 (42%), Gaps = 19/164 (11%)

Query: 272 VAEKILFVGESVQMFENQNVNLTRKGSILKNQEDTFAAELHRLKQQPLFSLVDFEQVVDR 331
           V + IL +   +Q+ + QN  L      L+N       ++ ++ Q   F   D ++ VDR
Sbjct: 617 VRDDILLLKNEIQVLQQQNQELKETEGKLRNTNQDLCNQMRQMVQD--FD-HDKQEAVDR 673

Query: 332 IRSTVAEH--LWKLMVEESDLLGQLKIIKDFYLLGRGELFQAFIDTAQHMLKTPPTAVTE 389
              T  +H    K  + ES LL +       + L + +LF+A+  T  H+          
Sbjct: 674 CERTYQQHHEAMKTQIRES-LLAK-------HALEKQQLFEAYERT--HLQLRSELDKLN 723

Query: 390 HDVNVAFQQSAHKVLLDDDNLLPLLHLTIEYHGKEHKDATQARE 433
            +V  A Q+   +V  + DNL   L  T E   KE +   + +E
Sbjct: 724 KEV-TAVQECYLEVCREKDNLELTLRKTTE---KEQQTQEKIKE 763


>gi|74959747 Fanconi anemia, complementation group M [Homo sapiens]
          Length = 2048

 Score = 29.6 bits (65), Expect = 9.4
 Identities = 28/103 (27%), Positives = 51/103 (49%), Gaps = 7/103 (6%)

Query: 15  SIFTWNKRSGLQVS---QDFPFLHPSETSVLNRLCRL-GTDYIRFTEFIEQYTGHVQQQD 70
           SIF++  R G++ S   +D+ FL   E  + NRL RL  +D I+     +     +Q ++
Sbjct: 661 SIFSY--RDGMRQSSLKKDW-FLSEEEFKLWNRLYRLRDSDEIKEITLPQVQFSSLQNEE 717

Query: 71  HHPSQQGQGGLHGIYLRAFCTGLDSVLQPYRQALLDLEQEFLG 113
           + P+Q+   G+H + L  +    D  L  ++    D  + F+G
Sbjct: 718 NKPAQESTTGIHQLSLSEWRLWQDHPLPTHQVDHSDRCRHFIG 760


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.137    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,527,617
Number of Sequences: 37866
Number of extensions: 1063381
Number of successful extensions: 2904
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 2874
Number of HSP's gapped (non-prelim): 34
length of query: 666
length of database: 18,247,518
effective HSP length: 109
effective length of query: 557
effective length of database: 14,120,124
effective search space: 7864909068
effective search space used: 7864909068
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.