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Search of human proteins with 38373671
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38373671 SEC24-related protein C [Homo sapiens]
(1094 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38373671 SEC24-related protein C [Homo sapiens] 2227 0.0
gi|38373669 SEC24-related protein C [Homo sapiens] 2227 0.0
gi|190343021 Sec24-related protein D [Homo sapiens] 1158 0.0
gi|112382212 SEC24 (S. cerevisiae) homolog B isoform a [Homo sap... 426 e-119
gi|112382214 SEC24 (S. cerevisiae) homolog B isoform b [Homo sap... 418 e-116
gi|116174780 SEC24 related gene family, member A [Homo sapiens] 395 e-109
gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens] 93 2e-18
gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1 pre... 81 5e-15
gi|163965366 nascent polypeptide-associated complex alpha subuni... 81 5e-15
gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens] 81 5e-15
gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 80 1e-14
gi|116284398 WAS/WASL interacting protein family, member 1 [Homo... 75 3e-13
gi|38373695 WAS/WASL interacting protein family, member 1 [Homo ... 75 3e-13
gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 75 4e-13
gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 74 6e-13
gi|112382226 atrophin-1 like protein isoform b [Homo sapiens] 74 6e-13
gi|112382224 atrophin-1 like protein isoform a [Homo sapiens] 74 6e-13
gi|112382216 atrophin-1 like protein isoform a [Homo sapiens] 74 6e-13
gi|18105032 type X collagen alpha 1 precursor [Homo sapiens] 70 8e-12
gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens] 70 8e-12
gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens] 70 8e-12
gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 69 2e-11
gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 69 2e-11
gi|55750053 atrophin-1 [Homo sapiens] 69 2e-11
gi|55750041 atrophin-1 [Homo sapiens] 69 2e-11
gi|150170670 piccolo isoform 2 [Homo sapiens] 69 3e-11
gi|150378539 piccolo isoform 1 [Homo sapiens] 69 3e-11
gi|21389357 MAPK-interacting and spindle-stabilizing protein [Ho... 68 5e-11
gi|162329583 cleavage and polyadenylation specific factor 6, 68 ... 67 7e-11
gi|47132519 Ras association and pleckstrin homology domains 1 is... 67 1e-10
>gi|38373671 SEC24-related protein C [Homo sapiens]
Length = 1094
Score = 2227 bits (5770), Expect = 0.0
Identities = 1094/1094 (100%), Positives = 1094/1094 (100%)
Query: 1 MNVNQSVPPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMS 60
MNVNQSVPPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMS
Sbjct: 1 MNVNQSVPPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMS 60
Query: 61 RAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQ 120
RAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQ
Sbjct: 61 RAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQ 120
Query: 121 PPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYG 180
PPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYG
Sbjct: 121 PPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYG 180
Query: 181 SYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPS 240
SYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPS
Sbjct: 181 SYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPS 240
Query: 241 VSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPY 300
VSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPY
Sbjct: 241 VSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPY 300
Query: 301 PAAPTFGSQPGPPQPLPPKRLDPDAIPSPIQVIEDDRNNRGTEPFVTGVRGQVPPLVTTN 360
PAAPTFGSQPGPPQPLPPKRLDPDAIPSPIQVIEDDRNNRGTEPFVTGVRGQVPPLVTTN
Sbjct: 301 PAAPTFGSQPGPPQPLPPKRLDPDAIPSPIQVIEDDRNNRGTEPFVTGVRGQVPPLVTTN 360
Query: 361 FLVKDQGNASPRYIRCTSYNIPCTSDMAKQAQVPLAAVIKPLARLPPEEASPYVVDHGES 420
FLVKDQGNASPRYIRCTSYNIPCTSDMAKQAQVPLAAVIKPLARLPPEEASPYVVDHGES
Sbjct: 361 FLVKDQGNASPRYIRCTSYNIPCTSDMAKQAQVPLAAVIKPLARLPPEEASPYVVDHGES 420
Query: 421 GPLRCNRCKAYMCPFMQFIEGGRRFQCCFCSCINDVPPQYFQHLDHTGKRVDAYDRPELS 480
GPLRCNRCKAYMCPFMQFIEGGRRFQCCFCSCINDVPPQYFQHLDHTGKRVDAYDRPELS
Sbjct: 421 GPLRCNRCKAYMCPFMQFIEGGRRFQCCFCSCINDVPPQYFQHLDHTGKRVDAYDRPELS 480
Query: 481 LGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAIRTGLVRLLCEELKSLLDFLPREGGA 540
LGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAIRTGLVRLLCEELKSLLDFLPREGGA
Sbjct: 481 LGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAIRTGLVRLLCEELKSLLDFLPREGGA 540
Query: 541 EESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFVPLLDGFLVNVNESRAVITS 600
EESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFVPLLDGFLVNVNESRAVITS
Sbjct: 541 EESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFVPLLDGFLVNVNESRAVITS 600
Query: 601 LLDQIPEMFADTRETETVFVPVIQAGMEALKAAECAGKLFLFHTSLPIAEAPGKLKNRDD 660
LLDQIPEMFADTRETETVFVPVIQAGMEALKAAECAGKLFLFHTSLPIAEAPGKLKNRDD
Sbjct: 601 LLDQIPEMFADTRETETVFVPVIQAGMEALKAAECAGKLFLFHTSLPIAEAPGKLKNRDD 660
Query: 661 RKLINTDKEKTLFQPQTGAYQTLAKECVAQGCCVDLFLFPNQYVDVATLSVVPQLTGGSV 720
RKLINTDKEKTLFQPQTGAYQTLAKECVAQGCCVDLFLFPNQYVDVATLSVVPQLTGGSV
Sbjct: 661 RKLINTDKEKTLFQPQTGAYQTLAKECVAQGCCVDLFLFPNQYVDVATLSVVPQLTGGSV 720
Query: 721 YKYASFQVENDQERFLSDLRRDVQKVVGFDAVMRVRTSTGIRAVDFFGAFYMSNTTDVEL 780
YKYASFQVENDQERFLSDLRRDVQKVVGFDAVMRVRTSTGIRAVDFFGAFYMSNTTDVEL
Sbjct: 721 YKYASFQVENDQERFLSDLRRDVQKVVGFDAVMRVRTSTGIRAVDFFGAFYMSNTTDVEL 780
Query: 781 AGLDGDKTVTVEFKHDDRLNEESGALLQCALLYTSCAGQRRLRIHNLALNCCTQLADLYR 840
AGLDGDKTVTVEFKHDDRLNEESGALLQCALLYTSCAGQRRLRIHNLALNCCTQLADLYR
Sbjct: 781 AGLDGDKTVTVEFKHDDRLNEESGALLQCALLYTSCAGQRRLRIHNLALNCCTQLADLYR 840
Query: 841 NCETDTLINYMAKFAYRGVLNSPVKAVRDTLITQCAQILACYRKNCASPSSAGQLILPEC 900
NCETDTLINYMAKFAYRGVLNSPVKAVRDTLITQCAQILACYRKNCASPSSAGQLILPEC
Sbjct: 841 NCETDTLINYMAKFAYRGVLNSPVKAVRDTLITQCAQILACYRKNCASPSSAGQLILPEC 900
Query: 901 MKLLPVYLNCVLKSDVLQPGAEVTTDDRAYVRQLVTSMDVTETNVFFYPRLLPLTKSPVE 960
MKLLPVYLNCVLKSDVLQPGAEVTTDDRAYVRQLVTSMDVTETNVFFYPRLLPLTKSPVE
Sbjct: 901 MKLLPVYLNCVLKSDVLQPGAEVTTDDRAYVRQLVTSMDVTETNVFFYPRLLPLTKSPVE 960
Query: 961 STTEPPAVRASEERLSNGDIYLLENGLNLFLWVGASVQQGVVQSLFSVSSFSQITSGLSV 1020
STTEPPAVRASEERLSNGDIYLLENGLNLFLWVGASVQQGVVQSLFSVSSFSQITSGLSV
Sbjct: 961 STTEPPAVRASEERLSNGDIYLLENGLNLFLWVGASVQQGVVQSLFSVSSFSQITSGLSV 1020
Query: 1021 LPVLDNPLSKKVRGLIDSLRAQRSRYMKLTVVKQEDKMEMLFKHFLVEDKSLSGGASYVD 1080
LPVLDNPLSKKVRGLIDSLRAQRSRYMKLTVVKQEDKMEMLFKHFLVEDKSLSGGASYVD
Sbjct: 1021 LPVLDNPLSKKVRGLIDSLRAQRSRYMKLTVVKQEDKMEMLFKHFLVEDKSLSGGASYVD 1080
Query: 1081 FLCHMHKEIRQLLS 1094
FLCHMHKEIRQLLS
Sbjct: 1081 FLCHMHKEIRQLLS 1094
>gi|38373669 SEC24-related protein C [Homo sapiens]
Length = 1094
Score = 2227 bits (5770), Expect = 0.0
Identities = 1094/1094 (100%), Positives = 1094/1094 (100%)
Query: 1 MNVNQSVPPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMS 60
MNVNQSVPPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMS
Sbjct: 1 MNVNQSVPPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMS 60
Query: 61 RAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQ 120
RAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQ
Sbjct: 61 RAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQ 120
Query: 121 PPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYG 180
PPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYG
Sbjct: 121 PPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYG 180
Query: 181 SYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPS 240
SYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPS
Sbjct: 181 SYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPS 240
Query: 241 VSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPY 300
VSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPY
Sbjct: 241 VSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPY 300
Query: 301 PAAPTFGSQPGPPQPLPPKRLDPDAIPSPIQVIEDDRNNRGTEPFVTGVRGQVPPLVTTN 360
PAAPTFGSQPGPPQPLPPKRLDPDAIPSPIQVIEDDRNNRGTEPFVTGVRGQVPPLVTTN
Sbjct: 301 PAAPTFGSQPGPPQPLPPKRLDPDAIPSPIQVIEDDRNNRGTEPFVTGVRGQVPPLVTTN 360
Query: 361 FLVKDQGNASPRYIRCTSYNIPCTSDMAKQAQVPLAAVIKPLARLPPEEASPYVVDHGES 420
FLVKDQGNASPRYIRCTSYNIPCTSDMAKQAQVPLAAVIKPLARLPPEEASPYVVDHGES
Sbjct: 361 FLVKDQGNASPRYIRCTSYNIPCTSDMAKQAQVPLAAVIKPLARLPPEEASPYVVDHGES 420
Query: 421 GPLRCNRCKAYMCPFMQFIEGGRRFQCCFCSCINDVPPQYFQHLDHTGKRVDAYDRPELS 480
GPLRCNRCKAYMCPFMQFIEGGRRFQCCFCSCINDVPPQYFQHLDHTGKRVDAYDRPELS
Sbjct: 421 GPLRCNRCKAYMCPFMQFIEGGRRFQCCFCSCINDVPPQYFQHLDHTGKRVDAYDRPELS 480
Query: 481 LGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAIRTGLVRLLCEELKSLLDFLPREGGA 540
LGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAIRTGLVRLLCEELKSLLDFLPREGGA
Sbjct: 481 LGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAIRTGLVRLLCEELKSLLDFLPREGGA 540
Query: 541 EESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFVPLLDGFLVNVNESRAVITS 600
EESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFVPLLDGFLVNVNESRAVITS
Sbjct: 541 EESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFVPLLDGFLVNVNESRAVITS 600
Query: 601 LLDQIPEMFADTRETETVFVPVIQAGMEALKAAECAGKLFLFHTSLPIAEAPGKLKNRDD 660
LLDQIPEMFADTRETETVFVPVIQAGMEALKAAECAGKLFLFHTSLPIAEAPGKLKNRDD
Sbjct: 601 LLDQIPEMFADTRETETVFVPVIQAGMEALKAAECAGKLFLFHTSLPIAEAPGKLKNRDD 660
Query: 661 RKLINTDKEKTLFQPQTGAYQTLAKECVAQGCCVDLFLFPNQYVDVATLSVVPQLTGGSV 720
RKLINTDKEKTLFQPQTGAYQTLAKECVAQGCCVDLFLFPNQYVDVATLSVVPQLTGGSV
Sbjct: 661 RKLINTDKEKTLFQPQTGAYQTLAKECVAQGCCVDLFLFPNQYVDVATLSVVPQLTGGSV 720
Query: 721 YKYASFQVENDQERFLSDLRRDVQKVVGFDAVMRVRTSTGIRAVDFFGAFYMSNTTDVEL 780
YKYASFQVENDQERFLSDLRRDVQKVVGFDAVMRVRTSTGIRAVDFFGAFYMSNTTDVEL
Sbjct: 721 YKYASFQVENDQERFLSDLRRDVQKVVGFDAVMRVRTSTGIRAVDFFGAFYMSNTTDVEL 780
Query: 781 AGLDGDKTVTVEFKHDDRLNEESGALLQCALLYTSCAGQRRLRIHNLALNCCTQLADLYR 840
AGLDGDKTVTVEFKHDDRLNEESGALLQCALLYTSCAGQRRLRIHNLALNCCTQLADLYR
Sbjct: 781 AGLDGDKTVTVEFKHDDRLNEESGALLQCALLYTSCAGQRRLRIHNLALNCCTQLADLYR 840
Query: 841 NCETDTLINYMAKFAYRGVLNSPVKAVRDTLITQCAQILACYRKNCASPSSAGQLILPEC 900
NCETDTLINYMAKFAYRGVLNSPVKAVRDTLITQCAQILACYRKNCASPSSAGQLILPEC
Sbjct: 841 NCETDTLINYMAKFAYRGVLNSPVKAVRDTLITQCAQILACYRKNCASPSSAGQLILPEC 900
Query: 901 MKLLPVYLNCVLKSDVLQPGAEVTTDDRAYVRQLVTSMDVTETNVFFYPRLLPLTKSPVE 960
MKLLPVYLNCVLKSDVLQPGAEVTTDDRAYVRQLVTSMDVTETNVFFYPRLLPLTKSPVE
Sbjct: 901 MKLLPVYLNCVLKSDVLQPGAEVTTDDRAYVRQLVTSMDVTETNVFFYPRLLPLTKSPVE 960
Query: 961 STTEPPAVRASEERLSNGDIYLLENGLNLFLWVGASVQQGVVQSLFSVSSFSQITSGLSV 1020
STTEPPAVRASEERLSNGDIYLLENGLNLFLWVGASVQQGVVQSLFSVSSFSQITSGLSV
Sbjct: 961 STTEPPAVRASEERLSNGDIYLLENGLNLFLWVGASVQQGVVQSLFSVSSFSQITSGLSV 1020
Query: 1021 LPVLDNPLSKKVRGLIDSLRAQRSRYMKLTVVKQEDKMEMLFKHFLVEDKSLSGGASYVD 1080
LPVLDNPLSKKVRGLIDSLRAQRSRYMKLTVVKQEDKMEMLFKHFLVEDKSLSGGASYVD
Sbjct: 1021 LPVLDNPLSKKVRGLIDSLRAQRSRYMKLTVVKQEDKMEMLFKHFLVEDKSLSGGASYVD 1080
Query: 1081 FLCHMHKEIRQLLS 1094
FLCHMHKEIRQLLS
Sbjct: 1081 FLCHMHKEIRQLLS 1094
>gi|190343021 Sec24-related protein D [Homo sapiens]
Length = 1032
Score = 1158 bits (2995), Expect = 0.0
Identities = 599/1061 (56%), Positives = 766/1061 (72%), Gaps = 50/1061 (4%)
Query: 44 YNGPVPGYQQTPPQGMSRAPPSSGAPPASTAQ--APCGQAAYGQFGQGDVQNGPSSTVQM 101
Y+ P PG +PP PS A P + P G A +G + GP
Sbjct: 12 YSQPQPGIGLSPPHYGHYGDPSHTASPTGMMKPAGPLGATAT----RGMLPPGPPP---- 63
Query: 102 QRLPGSQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFG 161
PG FG A PP P GPPP + ++ + AP PS+ +
Sbjct: 64 ---PGPHQFGQNGAHATGHPPQRFP-GPPPVN----------NVASSHAPYQPSAQSSYP 109
Query: 162 PPTSLASAS--GSFPNSGLYGSYPQGQAPPLSQAQGHPG------IQTPQRSAPSQASSF 213
P S +S + GS ++ SY G APP +QG PG +QTP R P Q S
Sbjct: 110 GPISTSSVTQLGSQLSAMQINSYGSGMAPP---SQGPPGPLSATSLQTPPR--PPQPSIL 164
Query: 214 TPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSP 273
P + P P+ PG S + +P+ +S PP PP Q P PLP
Sbjct: 165 QPGSQVLPPPPTTLNG--PGASPLPLPMYRPDGLSGPP---PPNAQYQPP--PLPGQ--T 215
Query: 274 QQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPLPPKRLDPDAIPSPIQVI 333
GY PQQ S G Q +Y G +P P GPPQP K+LDPD+IPSPIQVI
Sbjct: 216 LGAGYPPQQANSGPQMAGAQLSYPGGFPGGPA--QMAGPPQP--QKKLDPDSIPSPIQVI 271
Query: 334 EDDRNNRGTEPFVTGVRGQVPPLVTTNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQAQV 393
E+DR +RG + + T RGQ+PPLVTT+ +++DQGNASPR+IRCT+Y PCTSDMAKQAQ+
Sbjct: 272 ENDRASRGGQVYATNTRGQIPPLVTTDCMIQDQGNASPRFIRCTTYCFPCTSDMAKQAQI 331
Query: 394 PLAAVIKPLARLPPEEASPYVVDHGESGPLRCNRCKAYMCPFMQFIEGGRRFQCCFCSCI 453
PLAAVIKP A +P E+ Y+V+HGESGP+RCNRCKAYMCPFMQFIEGGRR+QC FC+C+
Sbjct: 332 PLAAVIKPFATIPSNESPLYLVNHGESGPVRCNRCKAYMCPFMQFIEGGRRYQCGFCNCV 391
Query: 454 NDVPPQYFQHLDHTGKRVDAYDRPELSLGSYEFLATVDYCKNNKFPSPPAFIFMIDVSYN 513
NDVPP YFQHLDH G+R+D Y++PELSLGSYE++AT+DYC+ +K P+PPAFIFMIDVSY+
Sbjct: 392 NDVPPFYFQHLDHIGRRLDHYEKPELSLGSYEYVATLDYCRKSKPPNPPAFIFMIDVSYS 451
Query: 514 AIRTGLVRLLCEELKSLLDFLPREGGAEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVV 573
I+ GLV+L+CEELK++L+ +P+E E SAIRVGF+TYNKVLHF+NVKS+LAQPQMMVV
Sbjct: 452 NIKNGLVKLICEELKTMLEKIPKEEQEETSAIRVGFITYNKVLHFFNVKSNLAQPQMMVV 511
Query: 574 SDVADMFVPLLDGFLVNVNESRAVITSLLDQIPEMFADTRETETVFVPVIQAGMEALKAA 633
+DV ++FVPLLDGFLVN ES++VI +LLDQIP+MFAD+ E ETVF PVIQAGMEALKAA
Sbjct: 512 TDVGEVFVPLLDGFLVNYQESQSVIHNLLDQIPDMFADSNENETVFAPVIQAGMEALKAA 571
Query: 634 ECAGKLFLFHTSLPIAEAPGKLKNRDDRKLINTDKEKTLFQPQTGAYQTLAKECVAQGCC 693
+C GKLF+FH+SLP AEAPGKLKNRDD+KL+NTDKEK LFQPQT Y +LAK+CVA GC
Sbjct: 572 DCPGKLFIFHSSLPTAEAPGKLKNRDDKKLVNTDKEKILFQPQTNVYDSLAKDCVAHGCS 631
Query: 694 VDLFLFPNQYVDVATLSVVPQLTGGSVYKYASFQVENDQERFLSDLRRDVQKVVGFDAVM 753
V LFLFP+QYVDVA+L +VPQLTGG++YKY +FQ+ D+++FL+DLR D++K +GFDA+M
Sbjct: 632 VTLFLFPSQYVDVASLGLVPQLTGGTLYKYNNFQMHLDRQQFLNDLRNDIEKKIGFDAIM 691
Query: 754 RVRTSTGIRAVDFFGAFYMSNTTDVELAGLDGDKTVTVEFKHDDRLNEESGALLQCALLY 813
RVRTSTG RA DFFG M+NTTDVE+A +D DK VTVEFKHDD+L+E+SGAL+QCA+LY
Sbjct: 692 RVRTSTGFRATDFFGGILMNNTTDVEMAAIDCDKAVTVEFKHDDKLSEDSGALIQCAVLY 751
Query: 814 TSCAGQRRLRIHNLALNCCTQLADLYRNCETDTLINYMAKFAYRGVLNSPVKAVRDTLIT 873
T+ +GQRRLRIHNL LNC +QLADLY++CETD LIN+ AK A++ VL+ P+K +R+ L+
Sbjct: 752 TTISGQRRLRIHNLGLNCSSQLADLYKSCETDALINFFAKSAFKAVLHQPLKVIREILVN 811
Query: 874 QCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGAEVTTDDRAYVRQ 933
Q A +LACYRKNCASPS+A QLILP+ MK+LPVY+NC+LK+ VL E++TD+RAY RQ
Sbjct: 812 QTAHMLACYRKNCASPSAASQLILPDSMKVLPVYMNCLLKNCVLLSRPEISTDERAYQRQ 871
Query: 934 LVTSMDVTETNVFFYPRLLPLTKSPVESTTEPPAVRASEERLSNGDIYLLENGLNLFLWV 993
LV +M V ++ +FFYP+LLP+ V+ST P AVR SE RLS I+LL NGL++FLW+
Sbjct: 872 LVMTMGVADSQLFFYPQLLPIHTLDVKSTMLPAAVRCSESRLSEEGIFLLANGLHMFLWL 931
Query: 994 GASVQQGVVQSLFSVSSFSQITSGLSVLPVLDNPLSKKVRGLIDSLRAQRSRYMKLTVVK 1053
G S ++Q +F+V SF+ I + +++LP + NP S+++R ++ ++ +R MKLT+VK
Sbjct: 932 GVSSPPELIQGIFNVPSFAHINTDMTLLPEVGNPYSQQLRMIMGIIQQKRPYSMKLTIVK 991
Query: 1054 QEDKMEMLFKHFLVEDKSLSGGASYVDFLCHMHKEIRQLLS 1094
Q ++ EM+F+ FLVEDK L GG+SYVDFLC +HKEI QLL+
Sbjct: 992 QREQPEMVFRQFLVEDKGLYGGSSYVDFLCCVHKEICQLLN 1032
Score = 43.9 bits (102), Expect = 8e-04
Identities = 41/149 (27%), Positives = 53/149 (35%), Gaps = 18/149 (12%)
Query: 199 IQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGT 258
+ TP S P +PP G PS T GP + PP PPG
Sbjct: 7 VATPPYSQPQPGIGLSPPHYGHYGDPSHTASPTGMMKPAGPLGATATRGMLPPGPPPPGP 66
Query: 259 QMTGPLGPLPPMHSPQQ-PGYQPQQN--GSFGPAR-GPQSNYGGPYPAAP---------- 304
G G H PQ+ PG P N S P + QS+Y GP +
Sbjct: 67 HQFGQNGAHATGHPPQRFPGPPPVNNVASSHAPYQPSAQSSYPGPISTSSVTQLGSQLSA 126
Query: 305 ----TFGSQPGPPQPLPPKRLDPDAIPSP 329
++GS PP PP L ++ +P
Sbjct: 127 MQINSYGSGMAPPSQGPPGPLSATSLQTP 155
Score = 43.9 bits (102), Expect = 8e-04
Identities = 69/275 (25%), Positives = 84/275 (30%), Gaps = 78/275 (28%)
Query: 2 NVNQSVPPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSR 61
NV S P P Q YPG +S Q GS A+ +Y G
Sbjct: 92 NVASSHAPYQPSAQSS--YPGPISTSSVTQLGSQLSAMQINSY-------------GSGM 136
Query: 62 APPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQP 121
APPS G P GP S +Q P QP
Sbjct: 137 APPSQGPP------------------------GPLSATSLQTPPRPP-----------QP 161
Query: 122 PVLQP----YGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSG 177
+LQP PPPT+ L+G S P GL PP + P
Sbjct: 162 SILQPGSQVLPPPPTT------LNGPGASPLPLPMYRPDGLSGPPPPNAQYQPPPLPGQT 215
Query: 178 LYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPS-MTGPLLPGQSF 236
L YP QA S P A + G P P+ M GP P +
Sbjct: 216 LGAGYPPQQA----------------NSGPQMAGAQLSYPGGFPGGPAQMAGPPQPQKKL 259
Query: 237 GGPSVSQPNHVSSPPQALPPG-TQMTGPLGPLPPM 270
S+ P V +A G T G +PP+
Sbjct: 260 DPDSIPSPIQVIENDRASRGGQVYATNTRGQIPPL 294
>gi|112382212 SEC24 (S. cerevisiae) homolog B isoform a [Homo sapiens]
Length = 1268
Score = 426 bits (1096), Expect = e-119
Identities = 324/1099 (29%), Positives = 508/1099 (46%), Gaps = 77/1099 (7%)
Query: 37 PAIPYGAYNGPVPGYQQTPPQGMSRAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPS 96
P++P G G + Q P + SG A + +P Q Q +G S
Sbjct: 199 PSLPAGDTYGQMFTSQNAPTVRPVKDNSFSGQNTAISHPSPLPPLPSQQHHQQQSLSGYS 258
Query: 97 S-TVQMQRLPGSQP-----FGSPLAPVGNQP----------PVLQPYGPPPTSAQVATQL 140
+ T LP +Q LA N P PV+Q PP +S V+T L
Sbjct: 259 TLTWSSPGLPSTQDNLIRNHTGSLAVANNNPTITVADSLSCPVMQNVQPPKSSPVVSTVL 318
Query: 141 SGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGL-YGSYPQGQAP----PLSQAQG 195
SG S + PP++ P TS+ S G+ YG Y QA PLS
Sbjct: 319 SGSSGSSSTR-TPPTANHPVEPVTSVTQPSELLQQKGVQYGEYVNNQASSAPTPLSSTSD 377
Query: 196 HPGIQTPQRSAPSQASSFTPPASGGPR-LPSMTGPLLPGQSFGGPSVSQPNHVSSP-PQA 253
+ A +SS T AS P ++ G P S P+ P P +
Sbjct: 378 DEEEEEEDEEAGVDSSSTTSSASPMPNSYDALEGGSYPDMLSSSASSPAPDPAPEPDPAS 437
Query: 254 LPPGTQMTGPLGPLPP-MHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGP 312
P P+ P P M P GY Q G + A P + G P+ P +
Sbjct: 438 APAPASAPAPVVPQPSKMAKPFGYGYPTLQPG-YQNATAPLIS--GVQPSNPVYSGFQQY 494
Query: 313 PQPLPPKR--------LDPDAIPSPIQVIEDDRNNRGTEPFVTGVRGQVPPLVTTNFLVK 364
PQ P L + P P + + +T V VP L N +K
Sbjct: 495 PQQYPGVNQLSSSIGGLSLQSSPQPESLRPVNLTQERNILPMTPVWAPVPNL---NADLK 551
Query: 365 DQGNASPRYIRCTSYNIPCTSDMAKQAQVPLAAVIKP---LARLPPEEASPYVVDHGESG 421
N SP RCT NIP T + +A++PL ++ P L +LP ++ V
Sbjct: 552 KL-NCSPDSFRCTLTNIPQTQALLNKAKLPLGLLLHPFRDLTQLPVITSNTIV------- 603
Query: 422 PLRCNRCKAYMCPFMQFIEGGRRFQCCFCSCINDVPPQYFQHLDHTGKRVDAYDRPELSL 481
RC C+ Y+ PF+ FI+ RR++C C +NDVP + F + T + + RPE+
Sbjct: 604 --RCRSCRTYINPFVSFIDQ-RRWKCNLCYRVNDVPEE-FMYNPLTRSYGEPHKRPEVQN 659
Query: 482 GSYEFLATVDYCKNNKFPSPPAFIFMIDVSYNAIRTGLVRLLCEELKSLLDFLPREGGAE 541
+ EF+A+ DY P P ++F++DVS+NA+ G + +LC+ L LD LP +
Sbjct: 660 STVEFIASSDYMLRP--PQPAVYLFVLDVSHNAVEAGYLTILCQSLLENLDKLPGD---- 713
Query: 542 ESAIRVGFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFVPLLDGFLVNVNESRAVITSL 601
S R+GF+T++ +HFYN++ L+QPQM++VSD+ D+F+P D LVN+ ES+ +I L
Sbjct: 714 -SRTRIGFMTFDSTIHFYNLQEGLSQPQMLIVSDIDDVFLPTPDSLLVNLYESKELIKDL 772
Query: 602 LDQIPEMFADTRETETVFVPVIQAGMEALKAAECAGKLFLFHTSLPIAEAPGKLKNRDDR 661
L+ +P MF +TRET + P +QA + + + G++ +F T LP A G L++R+D
Sbjct: 773 LNALPNMFTNTRETHSALGPALQAAFKLM--SPTGGRVSVFQTQLPSLGA-GLLQSREDP 829
Query: 662 KLINTDKEKTLFQPQTGAYQTLAKECVAQGCCVDLFLFPNQYVDVATLSVVPQLTGGSVY 721
++ K P T Y+ LA +C Q VDLFL +QY D+A+L+ + + + G +Y
Sbjct: 830 NQRSSTKVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLASLACMSKYSAGCIY 889
Query: 722 KYASFQVEND---QERFLSDLRRDVQKVVGFDAVMRVRTSTGIRAVDFFGAFYMSNTTDV 778
Y SF ++ E+ DL+R + + +GF+AVMR+R + G+ F G F++ +T +
Sbjct: 890 YYPSFHYTHNPSQAEKLQKDLKRYLTRKIGFEAVMRIRCTKGLSMHTFHGNFFVRSTDLL 949
Query: 779 ELAGLDGDKTVTVEFKHDDRLNEESGALLQCALLYTSCAGQRRLRIHNLALNCCTQLADL 838
LA ++ D V+ ++ L + S Q ALLYTS G+RR+R+H L L + LAD+
Sbjct: 950 SLANINPDAGFAVQLSIEESLTDTSLVCFQTALLYTSSKGERRIRVHTLCLPVVSSLADV 1009
Query: 839 YRNCETDTLINYMAKFAYRGVLNSPVKAVRDTLITQCAQILACYRKNCASPSSAGQLILP 898
Y + I +A A ++S + RD L+ L+ Y ++ + L+ P
Sbjct: 1010 YAGVDVQAAICLLANMAVDRSVSSSLSDARDALVNAVVDSLSAYGSTVSNLQHSA-LMAP 1068
Query: 899 ECMKLLPVYLNCVLKSDVLQPGAEVTTDDRAYVRQLVTSMDVTETNVFFYPRLLPLTKSP 958
+KL P+Y+ +LK + G DDR Y + S + +P L + +
Sbjct: 1069 SSLKLFPLYVLALLKQKAFRTGTSTRLDDRVYAMCQIKSQPLVHLMKMIHPNLYRIDRLT 1128
Query: 959 VESTT--------EPPAVRASEERLSNGDIYLLENGLNLFLWVGASVQQGVVQSLFSVSS 1010
E +PP + S E+L+ +L++ G ++WVG ++ + ++
Sbjct: 1129 DEGAVHVNDRIVPQPPLQKLSAEKLTREGAFLMDCGSVFYIWVGKGCDNNFIEDVLGYTN 1188
Query: 1011 FSQITSGLSVLPVLDNPLSKKVRGLIDSLRAQRSRYMKLTVVKQEDKMEMLFKHFLVEDK 1070
F+ I ++ LP LD S++ R I LR R L +VK E + F L+ED+
Sbjct: 1189 FASIPQKMTHLPELDTLSSERARSFITWLRDSRPLSPILHIVKDESPAKAEFFQHLIEDR 1248
Query: 1071 SLSGGASYVDFLCHMHKEI 1089
+ SY +FL H+ ++I
Sbjct: 1249 T-EAAFSYYEFLLHVQQQI 1266
Score = 38.5 bits (88), Expect = 0.035
Identities = 78/289 (26%), Positives = 95/289 (32%), Gaps = 66/289 (22%)
Query: 12 PFGQPQPIYPGYHQSSYGGQ--SGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSG-- 67
P G P +GG SG+ APA P GA GP P Q P Q + P G
Sbjct: 4 PAGSSHPAASARIPPKFGGAAVSGAAAPAGP-GA--GPAPHQQNGPAQNQMQVPSGYGLH 60
Query: 68 -----APPASTAQAP-----------CGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFG 111
AP +Q P CG Y QN +TV Q PG+Q
Sbjct: 61 HQNYIAPSGHYSQGPGKMTSLPLDTQCGD-YYSALYTVPTQNVTPNTVNQQ--PGAQQ-- 115
Query: 112 SPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASG 171
L GPP A + G + A +S L TS +
Sbjct: 116 ------------LYSRGPP------APHIVGSTLGSFQGAASSASHL----HTSASQPYS 153
Query: 172 SFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLL 231
SF N Y S A +QG P T A S S+ P+ P LP+
Sbjct: 154 SFVNH--YNSPAMYSASSSVASQGFP--STCGHYAMSTVSNAAYPSVSYPSLPA------ 203
Query: 232 PGQSFGGPSVSQPNHVSSPPQALPPGTQMT-----GPLGPLPPMHSPQQ 275
G ++G SQ P + Q T PL PLP QQ
Sbjct: 204 -GDTYGQMFTSQNAPTVRPVKDNSFSGQNTAISHPSPLPPLPSQQHHQQ 251
>gi|112382214 SEC24 (S. cerevisiae) homolog B isoform b [Homo sapiens]
Length = 1233
Score = 418 bits (1075), Expect = e-116
Identities = 319/1093 (29%), Positives = 509/1093 (46%), Gaps = 100/1093 (9%)
Query: 37 PAIPYGAYNGPVPGYQQTPPQGMSRAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPS 96
P++P G G + Q P + SG A + +P Q Q +G S
Sbjct: 199 PSLPAGDTYGQMFTSQNAPTVRPVKDNSFSGQNTAISHPSPLPPLPSQQHHQQQSLSGYS 258
Query: 97 S-TVQMQRLPGSQP-----FGSPLAPVGNQP----------PVLQPYGPPPTSAQVATQL 140
+ T LP +Q LA N P PV+Q PP +S V+T L
Sbjct: 259 TLTWSSPGLPSTQDNLIRNHTGSLAVANNNPTITVADSLSCPVMQNVQPPKSSPVVSTVL 318
Query: 141 SGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQ------ 194
SG S + PP++ P TS+ S G+ S A P+ +
Sbjct: 319 SGSSGSSSTR-TPPTANHPVEPVTSVTQPSELLQQKGVDSSSTTSSASPMPNSYDALEGG 377
Query: 195 GHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQAL 254
+P + + S+P+ + P + P S P++P S +++P P L
Sbjct: 378 SYPDMLSSSASSPAPDPAPEPDPASAPAPASAPAPVVPQPS----KMAKPFGYGYP--TL 431
Query: 255 PPGTQ-MTGPLGPLPPMHSPQQPGYQ--PQQNGSFGPARGPQSNYGGPYPAAPTFGSQPG 311
PG Q T PL +P G+Q PQQ + S+ GG Q
Sbjct: 432 QPGYQNATAPLISGVQPSNPVYSGFQQYPQQ---YPGVNQLSSSIGG-------LSLQSS 481
Query: 312 P-PQPLPPKRLDPDAIPSPIQVIEDDRNNRGTEPFVTGVRGQVPPLVTTNFLVKDQGNAS 370
P P+ L P L + P+ T V VP L N +K N S
Sbjct: 482 PQPESLRPVNLTQERNILPM----------------TPVWAPVPNL---NADLKKL-NCS 521
Query: 371 PRYIRCTSYNIPCTSDMAKQAQVPLAAVIKP---LARLPPEEASPYVVDHGESGPLRCNR 427
P RCT NIP T + +A++PL ++ P L +LP ++ V RC
Sbjct: 522 PDSFRCTLTNIPQTQALLNKAKLPLGLLLHPFRDLTQLPVITSNTIV---------RCRS 572
Query: 428 CKAYMCPFMQFIEGGRRFQCCFCSCINDVPPQYFQHLDHTGKRVDAYDRPELSLGSYEFL 487
C+ Y+ PF+ FI+ RR++C C +NDVP + F + T + + RPE+ + EF+
Sbjct: 573 CRTYINPFVSFIDQ-RRWKCNLCYRVNDVPEE-FMYNPLTRSYGEPHKRPEVQNSTVEFI 630
Query: 488 ATVDYCKNNKFPSPPAFIFMIDVSYNAIRTGLVRLLCEELKSLLDFLPREGGAEESAIRV 547
A+ DY P P ++F++DVS+NA+ G + +LC+ L LD LP + S R+
Sbjct: 631 ASSDYMLRP--PQPAVYLFVLDVSHNAVEAGYLTILCQSLLENLDKLPGD-----SRTRI 683
Query: 548 GFVTYNKVLHFYNVKSSLAQPQMMVVSDVADMFVPLLDGFLVNVNESRAVITSLLDQIPE 607
GF+T++ +HFYN++ L+QPQM++VSD+ D+F+P D LVN+ ES+ +I LL+ +P
Sbjct: 684 GFMTFDSTIHFYNLQEGLSQPQMLIVSDIDDVFLPTPDSLLVNLYESKELIKDLLNALPN 743
Query: 608 MFADTRETETVFVPVIQAGMEALKAAECAGKLFLFHTSLPIAEAPGKLKNRDDRKLINTD 667
MF +TRET + P +QA + + + G++ +F T LP A G L++R+D ++
Sbjct: 744 MFTNTRETHSALGPALQAAFKLM--SPTGGRVSVFQTQLPSLGA-GLLQSREDPNQRSST 800
Query: 668 KEKTLFQPQTGAYQTLAKECVAQGCCVDLFLFPNQYVDVATLSVVPQLTGGSVYKYASFQ 727
K P T Y+ LA +C Q VDLFL +QY D+A+L+ + + + G +Y Y SF
Sbjct: 801 KVVQHLGPATDFYKKLALDCSGQQTAVDLFLLSSQYSDLASLACMSKYSAGCIYYYPSFH 860
Query: 728 VEND---QERFLSDLRRDVQKVVGFDAVMRVRTSTGIRAVDFFGAFYMSNTTDVELAGLD 784
++ E+ DL+R + + +GF+AVMR+R + G+ F G F++ +T + LA ++
Sbjct: 861 YTHNPSQAEKLQKDLKRYLTRKIGFEAVMRIRCTKGLSMHTFHGNFFVRSTDLLSLANIN 920
Query: 785 GDKTVTVEFKHDDRLNEESGALLQCALLYTSCAGQRRLRIHNLALNCCTQLADLYRNCET 844
D V+ ++ L + S Q ALLYTS G+RR+R+H L L + LAD+Y +
Sbjct: 921 PDAGFAVQLSIEESLTDTSLVCFQTALLYTSSKGERRIRVHTLCLPVVSSLADVYAGVDV 980
Query: 845 DTLINYMAKFAYRGVLNSPVKAVRDTLITQCAQILACYRKNCASPSSAGQLILPECMKLL 904
I +A A ++S + RD L+ L+ Y ++ + L+ P +KL
Sbjct: 981 QAAICLLANMAVDRSVSSSLSDARDALVNAVVDSLSAYGSTVSNLQHSA-LMAPSSLKLF 1039
Query: 905 PVYLNCVLKSDVLQPGAEVTTDDRAYVRQLVTSMDVTETNVFFYPRLLPLTKSPVESTT- 963
P+Y+ +LK + G DDR Y + S + +P L + + E
Sbjct: 1040 PLYVLALLKQKAFRTGTSTRLDDRVYAMCQIKSQPLVHLMKMIHPNLYRIDRLTDEGAVH 1099
Query: 964 -------EPPAVRASEERLSNGDIYLLENGLNLFLWVGASVQQGVVQSLFSVSSFSQITS 1016
+PP + S E+L+ +L++ G ++WVG ++ + ++F+ I
Sbjct: 1100 VNDRIVPQPPLQKLSAEKLTREGAFLMDCGSVFYIWVGKGCDNNFIEDVLGYTNFASIPQ 1159
Query: 1017 GLSVLPVLDNPLSKKVRGLIDSLRAQRSRYMKLTVVKQEDKMEMLFKHFLVEDKSLSGGA 1076
++ LP LD S++ R I LR R L +VK E + F L+ED++
Sbjct: 1160 KMTHLPELDTLSSERARSFITWLRDSRPLSPILHIVKDESPAKAEFFQHLIEDRT-EAAF 1218
Query: 1077 SYVDFLCHMHKEI 1089
SY +FL H+ ++I
Sbjct: 1219 SYYEFLLHVQQQI 1231
Score = 41.2 bits (95), Expect = 0.005
Identities = 99/413 (23%), Positives = 140/413 (33%), Gaps = 105/413 (25%)
Query: 12 PFGQPQPIYPGYHQSSYGGQ--SGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSG-- 67
P G P +GG SG+ APA P GA GP P Q P Q + P G
Sbjct: 4 PAGSSHPAASARIPPKFGGAAVSGAAAPAGP-GA--GPAPHQQNGPAQNQMQVPSGYGLH 60
Query: 68 -----APPASTAQAP-----------CGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFG 111
AP +Q P CG Y QN +TV Q PG+Q
Sbjct: 61 HQNYIAPSGHYSQGPGKMTSLPLDTQCGD-YYSALYTVPTQNVTPNTVNQQ--PGAQQLY 117
Query: 112 S--PLAP--VGNQPPVLQPYGPPPTSAQVATQLSG--------------MQISGAVAPAP 153
S P AP VG+ Q G +++ + T S S +VA
Sbjct: 118 SRGPPAPHIVGSTLGSFQ--GAASSASHLHTSASQPYSSFVNHYNSPAMYSASSSVASQG 175
Query: 154 PSSGLGFGPPTSLASA---SGSFPNSGLYGSYPQ-------------------GQAPPLS 191
S G +++++A S S+P+ +Y Q GQ +S
Sbjct: 176 FPSTCGHYAMSTVSNAAYPSVSYPSLPAGDTYGQMFTSQNAPTVRPVKDNSFSGQNTAIS 235
Query: 192 QAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQ------SFGGPSVSQPN 245
P + + Q S ++ P LPS L+ + P+++ +
Sbjct: 236 HPSPLPPLPSQQHHQQQSLSGYSTLTWSSPGLPSTQDNLIRNHTGSLAVANNNPTITVAD 295
Query: 246 HVS-------SPPQALP-PGTQMTGPLG------------PLPPMHSPQQPGYQPQQNG- 284
+S PP++ P T ++G G P+ P+ S QP QQ G
Sbjct: 296 SLSCPVMQNVQPPKSSPVVSTVLSGSSGSSSTRTPPTANHPVEPVTSVTQPSELLQQKGV 355
Query: 285 ---SFGPARGPQSN-----YGGPYPAAPTFGSQPGPPQPLPPKRLDPDAIPSP 329
S + P N GG YP S P P P DP + P+P
Sbjct: 356 DSSSTTSSASPMPNSYDALEGGSYP--DMLSSSASSPAPDPAPEPDPASAPAP 406
>gi|116174780 SEC24 related gene family, member A [Homo sapiens]
Length = 1093
Score = 395 bits (1015), Expect = e-109
Identities = 312/1130 (27%), Positives = 510/1130 (45%), Gaps = 144/1130 (12%)
Query: 63 PPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQ------RLPGSQPFGSP--- 113
P S GAP + AQ A+ + G VQN S+ + +LPGS P P
Sbjct: 7 PASGGAPASLQAQNGAALASGSPYTNGPVQNALLSSQESVSQGYNFQLPGSYPHPIPAKT 66
Query: 114 LAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGP------PTSLA 167
L PV Q YG S Q + VA P + L GP P S
Sbjct: 67 LNPVSGQ----SNYGGSQGSGQTLNR-------PPVASNPVTPSLHSGPAPRMPLPASQN 115
Query: 168 SASGSFPNSGLYGSYPQGQAPP-LSQAQGHPGIQTPQRSAPSQASSFTPPASG------- 219
A+ P+S P+ PP L+ +P + P +S P SG
Sbjct: 116 PATTPMPSSSFL---PEANLPPPLNWQYNYPSTASQTNHCPRASSQ--PTVSGNTSLTTN 170
Query: 220 ------------------GPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPP-QALPPGTQM 260
GP +P + P LP G P PP +AL P T
Sbjct: 171 HQYVSSGYPSLQNSFIKSGPSVPPLVNPPLPTTFQPGAPHGPPPAGGPPPVRALTPLTSS 230
Query: 261 TGPLGPLPPMHSP--QQPGYQPQQNGSF------------GPARGPQSNYGGP------- 299
+ P P +S Q+ NGS G PQ P
Sbjct: 231 YRDV-PQPLFNSAVNQEGITSNTNNGSMVVHSSYDEIEGGGLLATPQLTNKNPKMSRSVG 289
Query: 300 --YPAAPTFGSQPGPPQP--LPPKRLDPDAIPSPIQVIEDDRNNRGTEPFVTGVRGQVPP 355
YP+ P PP +PP L+ + P N+ T ++G+ Q
Sbjct: 290 YSYPSLPPGYQNTTPPGATGVPPSSLNYPSGPQAFTQTPLGANHLTTS--MSGLSLQPEG 347
Query: 356 LVTTNFLVK--------------------DQGNASPRYIRCTSYNIPCTSDMAKQAQVPL 395
L N L + + N +P RCT +IP T + +A++PL
Sbjct: 348 LRVVNLLQERNMLPSTPLKPPVPNLHEDIQKLNCNPELFRCTLTSIPQTQALLNKAKLPL 407
Query: 396 AAVIKP---LARLPPEEASPYVVDHGESGPLRCNRCKAYMCPFMQFIEGGRRFQCCFCSC 452
++ P L +LP +S V RC C+ Y+ PF+ F++ RR++C C
Sbjct: 408 GLLLHPFKDLVQLPVVTSSTIV---------RCRSCRTYINPFVSFLDQ-RRWKCNLCYR 457
Query: 453 INDVPPQYFQHLDHTGKRVDAYDRPELSLGSYEFLATVDYCKNNKFPSPPAFIFMIDVSY 512
+NDVP ++ + T + + RPE+ + EF+A +Y P PP ++F+ DVS+
Sbjct: 458 VNDVPEEFLYN-PLTRVYGEPHRRPEVQNATIEFMAPSEYMLRP--PQPPVYLFVFDVSH 514
Query: 513 NAIRTGLVRLLCEELKSLLDFLPREGGAEESAIRVGFVTYNKVLHFYNVKSSLAQPQMMV 572
NA+ TG + +C+ L LD LP + ++GF+T++ +HFY ++ SL+QPQM++
Sbjct: 515 NAVETGYLNSVCQSLLDNLDLLPGN-----TRTKIGFITFDSTIHFYGLQESLSQPQMLI 569
Query: 573 VSDVADMFVPLLDGFLVNVNESRAVITSLLDQIPEMFADTRETETVFVPVIQAGMEALKA 632
VSD+ D+F+P+ + LVN+NES+ ++ LL +P+MF T ET++ P +QA + +
Sbjct: 570 VSDIEDVFIPMPENLLVNLNESKELVQDLLKTLPQMFTKTLETQSALGPALQAAFKLM-- 627
Query: 633 AECAGKLFLFHTSLPIAEAPGKLKNRDDRKLINTDKEKTLFQPQTGAYQTLAKECVAQGC 692
+ G++ +F T LP G LK R++ ++ K+ + P T Y+ LA +C Q
Sbjct: 628 SPTGGRMSVFQTQLPTL-GVGALKPREEPNHRSSAKDIHM-TPSTDFYKKLALDCSGQQV 685
Query: 693 CVDLFLFPNQYVDVATLSVVPQLTGGSVYKYASFQVENDQ---ERFLSDLRRDVQKVVGF 749
VDLFL QY D+A+L + + + GSVY Y S+ +++ ++ +L+R + + +GF
Sbjct: 686 AVDLFLLSGQYSDLASLGCISRYSAGSVYYYPSYHHQHNPVQVQKLQKELQRYLTRKIGF 745
Query: 750 DAVMRVRTSTGIRAVDFFGAFYMSNTTDVELAGLDGDKTVTVEFKHDDRLNEESGALLQC 809
+AVMR+R + G+ F G F++ +T + L ++ D V+ ++ L + Q
Sbjct: 746 EAVMRIRCTKGLSIHTFHGNFFVRSTDLLSLPNVNPDAGYAVQMSVEESLTDTQLVSFQS 805
Query: 810 ALLYTSCAGQRRLRIHNLALNCCTQLADLYRNCETDTLINYMAKFAYRGVLNSPVKAVRD 869
ALLYTS G+RR+R+H L L + L D++ + + +A A + + + RD
Sbjct: 806 ALLYTSSKGERRIRVHTLCLPVVSTLNDVFLGADVQAISGLLANMAVDRSMTASLSDARD 865
Query: 870 TLITQCAQILACYRKNCASPSSAGQLILPECMKLLPVYLNCVLKSDVLQPGAEVTTDDRA 929
L+ L+ YR + S G L++P ++L P+++ +LK Q G D+R
Sbjct: 866 ALVNAVIDSLSAYRSSVLSNQQPG-LMVPFSLRLFPLFVLALLKQKSFQTGTNARLDERI 924
Query: 930 YVRQLVTSMDVTETNVFFYPRLLPLTKSPVE--------STTEPPAVRASEERLSNGDIY 981
+ V + + + +P L + E + +PP ++ S E+LS +
Sbjct: 925 FAMCQVKNQPLVYLMLTTHPSLYRVDNLSDEGALNISDRTIPQPPILQLSVEKLSRDGAF 984
Query: 982 LLENGLNLFLWVGASVQQGVVQSLFSVSSFSQITSGLSVLPVLDNPLSKKVRGLIDSLRA 1041
L++ G L LWVG + Q + + V +++ I ++ LP LD P S ++ I LR
Sbjct: 985 LMDAGSVLMLWVGKNCTQNFLSQVLGVQNYASIPQPMTDLPELDTPESARIIAFISWLRE 1044
Query: 1042 QRSRYMKLTVVKQEDKMEMLFKHFLVEDKSLSGGASYVDFLCHMHKEIRQ 1091
QR + L V++ E M+ F ++ED++ S SY +FL H+ +++ +
Sbjct: 1045 QRPFFPILYVIRDESPMKANFLQNMIEDRTES-ALSYYEFLLHIQQQVNK 1093
Score = 42.4 bits (98), Expect = 0.002
Identities = 52/171 (30%), Positives = 71/171 (41%), Gaps = 26/171 (15%)
Query: 151 PAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQA 210
P P+SG G P SL + +G+ SG Y G P+ A + + Q S SQ
Sbjct: 4 PGIPASG---GAPASLQAQNGAALASG--SPYTNG---PVQNA-----LLSSQESV-SQG 49
Query: 211 SSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQM--TGPLGPLP 268
+F P S +P+ T + GQS G S ++ PP A P T +GP P
Sbjct: 50 YNFQLPGSYPHPIPAKTLNPVSGQSNYGGSQGSGQTLNRPPVASNPVTPSLHSGP-APRM 108
Query: 269 PMHSPQQPGYQPQQNGSFGPARG--PQSNYGGPYPA-------APTFGSQP 310
P+ + Q P P + SF P P N+ YP+ P SQP
Sbjct: 109 PLPASQNPATTPMPSSSFLPEANLPPPLNWQYNYPSTASQTNHCPRASSQP 159
>gi|209571537 proline-rich protein BstNI subfamily 2 [Homo sapiens]
Length = 416
Score = 92.8 bits (229), Expect = 2e-18
Identities = 109/362 (30%), Positives = 128/362 (35%), Gaps = 72/362 (19%)
Query: 4 NQSVPPVPPFGQPQ------------PIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVP-G 50
NQ P PP G+PQ P PG Q S +P P G GP P G
Sbjct: 66 NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQG 125
Query: 51 YQQTPPQGMSRAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPF 110
Q PQG P PP P G G+ QG G + + + R P +P
Sbjct: 126 GNQ--PQGPPPPPGKPQGPPPQGGNKPQGPPPPGK-PQGPPPQGDNKS-RSSRSPPGKPQ 181
Query: 111 GSPLA----PVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSL 166
G P P G PP +P GPPP G PP G GPP
Sbjct: 182 GPPPQGGNQPQGPPPPPGKPQGPPPQG-------------GNKPQGPPPPGKPQGPPPQG 228
Query: 167 ASASGSF----------PNSGLYGSYPQGQAPPLSQAQGHP--GIQTPQRSAPSQASSFT 214
+ S S P G G+ PQG PP + QG P G PQ P
Sbjct: 229 DNKSQSARSPPGKPQGPPPQG--GNQPQGPPPPPGKPQGPPPQGGNKPQ-GPPPPGKPQG 285
Query: 215 PPASGGPRLPSMTGPLLPGQSFGGPSV--SQPNHVSSPP---QALPP--GTQMTGPLGPL 267
PP GG + S P PG+ G P +QP PP Q PP G + GP P
Sbjct: 286 PPPQGGSKSRSSRSP--PGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQGPPPPG 343
Query: 268 PPMHSPQQPGYQ--------------PQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPP 313
P P Q G + PQQ G+ P + P AP G GPP
Sbjct: 344 KPQGPPPQGGSKSRSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAPPAGQPQGPP 403
Query: 314 QP 315
+P
Sbjct: 404 RP 405
Score = 82.8 bits (203), Expect = 2e-15
Identities = 108/345 (31%), Positives = 123/345 (35%), Gaps = 61/345 (17%)
Query: 2 NVNQSVPPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVP-GYQQTPPQGMS 60
+V+Q P G PQ P G + P P G GP P G Q PQG
Sbjct: 22 DVSQEESPSLIAGNPQGAPPQ-------GGNKPQGPPSPPGKPQGPPPQGGNQ--PQGPP 72
Query: 61 RAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLA----P 116
P PP P G G+ QG G S + R P +P G P P
Sbjct: 73 PPPGKPQGPPPQGGNKPQGPPPPGK-PQGPPPQGDKS--RSPRSPPGKPQGPPPQGGNQP 129
Query: 117 VGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSF--- 173
G PP +P GPPP G PP G GPP + S S
Sbjct: 130 QGPPPPPGKPQGPPPQG-------------GNKPQGPPPPGKPQGPPPQGDNKSRSSRSP 176
Query: 174 -------PNSGLYGSYPQGQAPPLSQAQGHP--GIQTPQRSAPSQASSFTPPASGGPRLP 224
P G G+ PQG PP + QG P G PQ P PP G +
Sbjct: 177 PGKPQGPPPQG--GNQPQGPPPPPGKPQGPPPQGGNKPQ-GPPPPGKPQGPPPQGDNKSQ 233
Query: 225 SMTGPLLPGQSFGGPSV--SQPNHVSSPPQALPPGTQMTG---PLGPLPPMHSPQQPGYQ 279
S P PG+ G P +QP PP P G G P GP PP PQ P
Sbjct: 234 SARSP--PGKPQGPPPQGGNQPQG-PPPPPGKPQGPPPQGGNKPQGP-PPPGKPQGP--- 286
Query: 280 PQQNGSFG-PARGPQSNYGGPYPAAPTFGSQPGPPQPLPPKRLDP 323
P Q GS +R P GP P G+QP P P P K P
Sbjct: 287 PPQGGSKSRSSRSPPGKPQGPPPQG---GNQPQGPPPPPGKPQGP 328
Score = 80.5 bits (197), Expect = 8e-15
Identities = 103/330 (31%), Positives = 118/330 (35%), Gaps = 71/330 (21%)
Query: 4 NQSVPPVPPFGQPQ------------PIYPGYHQSSYG-GQSGSTAPAIPYGAYNGPVP- 49
NQ P PP G+PQ P PG Q G + S + P G GP P
Sbjct: 127 NQPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDNKSRSSRSPPGKPQGPPPQ 186
Query: 50 GYQQTPPQGMSRAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQP 109
G Q PQG P PP P G G+ QG G + + Q R P +P
Sbjct: 187 GGNQ--PQGPPPPPGKPQGPPPQGGNKPQGPPPPGK-PQGPPPQGDNKS-QSARSPPGKP 242
Query: 110 FGSPLA----PVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTS 165
G P P G PP +P GPPP G PP G GPP
Sbjct: 243 QGPPPQGGNQPQGPPPPPGKPQGPPPQG-------------GNKPQGPPPPGKPQGPPPQ 289
Query: 166 LASASGSF----------PNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTP 215
S S S P G G+ PQG PP + QG P PQ Q P
Sbjct: 290 GGSKSRSSRSPPGKPQGPPPQG--GNQPQGPPPPPGKPQGPP----PQGGNKPQG----P 339
Query: 216 PASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPM-HSPQ 274
P G P+ GP G S + S P PPQ + P GP PP +PQ
Sbjct: 340 PPPGKPQ-----GPPPQGGSKSRSARSPPGKPQGPPQQ-----EGNNPQGPPPPAGGNPQ 389
Query: 275 QPGYQPQQNGSFGPARGPQSNYGGPYPAAP 304
QP P GP R PQ G P+ P
Sbjct: 390 QP-QAPPAGQPQGPPRPPQ----GGRPSRP 414
Score = 37.4 bits (85), Expect = 0.078
Identities = 41/133 (30%), Positives = 49/133 (36%), Gaps = 10/133 (7%)
Query: 244 PNHVSSPPQALPP--GTQMTGPLGPL-PPMHSPQQPGYQPQQNGSFGPARGPQSN--YGG 298
P+ ++ PQ PP G + GP P P P Q G QPQ G P PQ GG
Sbjct: 29 PSLIAGNPQGAPPQGGNKPQGPPSPPGKPQGPPPQGGNQPQ--GPPPPPGKPQGPPPQGG 86
Query: 299 PYPAAPTFGSQPGPPQPLPPKRLDPDAIPSPIQVIEDDRNNRGTEPFVTGVRGQVPPLVT 358
P P +P P P K P + P Q N+ P + Q PP
Sbjct: 87 NKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQG 146
Query: 359 TNFLVKDQGNASP 371
N K QG P
Sbjct: 147 GN---KPQGPPPP 156
>gi|41349482 proline-rich protein BstNI subfamily 1 isoform 1
preproprotein [Homo sapiens]
Length = 331
Score = 81.3 bits (199), Expect = 5e-15
Identities = 91/311 (29%), Positives = 111/311 (35%), Gaps = 41/311 (13%)
Query: 32 SGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSGAPPASTAQAPCGQAAYGQFGQGDV 91
S +P++ G GP P PQG P PP P G G+ QG
Sbjct: 24 SQEESPSLIAGNPQGPSP-QGGNKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGK-PQGPP 81
Query: 92 QNGPSSTVQMQRLPGSQPFGSPLA----PVGNQPPVLQPYGPPPTSAQVATQLSGMQISG 147
G S + R P +P G P P G PP +P GPPP Q + G G
Sbjct: 82 PQGDKS--RSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPP---QGGNRPQGPPPPG 136
Query: 148 AVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHP--GIQTPQRS 205
PP P + G P G + PQG PP + QG P G + PQ
Sbjct: 137 KPQGPPPQGDKSRSPRSPPGKPQGPPPQGG---NQPQGPPPPPGKPQGPPPQGGKKPQGP 193
Query: 206 APSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSV--SQPNHVSSPP---QALPP--GT 258
P PP G + S P PG+ G P +QP PP Q PP G
Sbjct: 194 PPPGKPQGPPPQ--GDKSRSSQSP--PGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGN 249
Query: 259 QMTGPLGPLPPMHSPQQPGYQ--------------PQQNGSFGPARGPQSNYGGPYPAAP 304
+ GP P P P Q G + PQQ G+ P + P AP
Sbjct: 250 KPQGPPPPGKPQGPPAQGGSKSQSARSPPGKPQGPPQQEGNNPQGPPPPAGGNPQQPQAP 309
Query: 305 TFGSQPGPPQP 315
G GPP+P
Sbjct: 310 PAGQPQGPPRP 320
Score = 81.3 bits (199), Expect = 5e-15
Identities = 99/328 (30%), Positives = 114/328 (34%), Gaps = 70/328 (21%)
Query: 4 NQSVPPVPPFGQPQ------------PIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVP-G 50
N+ P PP G+PQ P PG Q S +P P G GP P G
Sbjct: 45 NKPQGPPPPPGKPQGPPPQGGNKPQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQG 104
Query: 51 YQQTPPQGMSRAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPF 110
Q PQG P PP P G G+ QG G S + R P +P
Sbjct: 105 GNQ--PQGPPPPPGKPQGPPPQGGNRPQGPPPPGK-PQGPPPQGDKS--RSPRSPPGKPQ 159
Query: 111 GSPLA----PVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSL 166
G P P G PP +P GPPP G PP G GPP
Sbjct: 160 GPPPQGGNQPQGPPPPPGKPQGPPPQG-------------GKKPQGPPPPGKPQGPPPQG 206
Query: 167 ASASGSFPNSGLY-------GSYPQGQAPPLSQAQGHP--GIQTPQRSAPSQASSFTPPA 217
+ S G G+ PQG PP + QG P G PQ P PPA
Sbjct: 207 DKSRSSQSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPPPQGGNKPQ-GPPPPGKPQGPPA 265
Query: 218 SGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPM-HSPQQP 276
GG + S P PG+ G PP + P GP PP +PQQP
Sbjct: 266 QGGSKSQSARSP--PGKPQG-----------------PPQQEGNNPQGPPPPAGGNPQQP 306
Query: 277 GYQPQQNGSFGPARGPQSNYGGPYPAAP 304
P GP R PQ G P+ P
Sbjct: 307 -QAPPAGQPQGPPRPPQ----GGRPSRP 329
Score = 68.9 bits (167), Expect = 2e-11
Identities = 73/251 (29%), Positives = 85/251 (33%), Gaps = 46/251 (18%)
Query: 90 DVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAV 149
DV S ++ G P G P G PP +P GPPP Q + G G
Sbjct: 22 DVSQEESPSLIAGNPQGPSPQGGN-KPQGPPPPPGKPQGPPP---QGGNKPQGPPPPGKP 77
Query: 150 APAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQ 209
PP P + G P G + PQG PP + QG
Sbjct: 78 QGPPPQGDKSRSPRSPPGKPQGPPPQGG---NQPQGPPPPPGKPQG-------------- 120
Query: 210 ASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTG---PLGP 266
PP GG R GP PG+ G P + P P G G P GP
Sbjct: 121 -----PPPQGGNR---PQGPPPPGKPQGPPPQGDKSRSPRSPPGKPQGPPPQGGNQPQGP 172
Query: 267 LPPMHSPQQP----GYQPQQNGSFGPARGP----------QSNYGGPYPAAPTFGSQPGP 312
PP PQ P G +PQ G +GP QS G P P G+QP
Sbjct: 173 PPPPGKPQGPPPQGGKKPQGPPPPGKPQGPPPQGDKSRSSQSPPGKPQGPPPQGGNQPQG 232
Query: 313 PQPLPPKRLDP 323
P P P K P
Sbjct: 233 PPPPPGKPQGP 243
Score = 43.9 bits (102), Expect = 8e-04
Identities = 54/178 (30%), Positives = 61/178 (34%), Gaps = 40/178 (22%)
Query: 180 GSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGP 239
G+ PQG PP + QG P PQ Q PP G P+ P P Q G
Sbjct: 44 GNKPQGPPPPPGKPQGPP----PQGGNKPQG----PPPPGKPQGP-------PPQ---GD 85
Query: 240 SVSQPNHVSSPPQALPP--GTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYG 297
P PQ PP G Q P GP PP PQ P P +G G
Sbjct: 86 KSRSPRSPPGKPQGPPPQGGNQ---PQGPPPPPGKPQGP-----------PPQGGNRPQG 131
Query: 298 GPYPAAPTFGSQPGPPQPLPPKRLDPDAIPSPIQVIEDDRNNRGTEPFVTGVRGQVPP 355
P P P GPP P K P + P Q N+ P + Q PP
Sbjct: 132 PPPPGKPQ-----GPP-PQGDKSRSPRSPPGKPQGPPPQGGNQPQGPPPPPGKPQGPP 183
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 81.3 bits (199), Expect = 5e-15
Identities = 95/334 (28%), Positives = 114/334 (34%), Gaps = 64/334 (19%)
Query: 33 GSTAPAIPYGAYNGPVPGYQQTP-PQGMSRAPPSSGAPPASTAQAPCGQAAYGQFGQGDV 91
G A P GA P+P P P+G PP GAP A P +
Sbjct: 1092 GGPATPSPKGA---PMPPAATPPSPKGGLATPPHKGAPTTPAATPPSPKGGLATPPPKGA 1148
Query: 92 QNGPSSTVQMQR--LPGSQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAV 149
P++T + L P G+P P P P G + A
Sbjct: 1149 PTTPAATPPSPKGGLATPPPKGAPTTPAATPPS--------PKGGLATPSPKGAPTTPAA 1200
Query: 150 APAPPSSGLGF----GPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRS 205
P P GL G PT+ A+ S P GL P+G AP TP +
Sbjct: 1201 TPPSPKGGLATPSPKGAPTTPAATPPS-PKGGLATPSPKG-APT-----------TPAAT 1247
Query: 206 APS-QASSFTPPASGGPRLPSMTGPLL-------------------PGQSFGGPSVSQPN 245
PS + TPP G P P+ T P L P GGP+ S P
Sbjct: 1248 PPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSPPK 1307
Query: 246 HVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQP--QQNGSFGPARGPQSNYG------ 297
+PP A PP + G G PP +P P P + PA P S G
Sbjct: 1308 GAPTPPAATPPSPK--GSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGGPTTPSS 1365
Query: 298 --GPYPAAPTFGSQPGPPQPLPPKRLDPDAIPSP 329
GP P A T S G P PP AIPSP
Sbjct: 1366 KEGPTPPAAT-PSHKGGPAMTPPSPKRGPAIPSP 1398
Score = 78.2 bits (191), Expect = 4e-14
Identities = 107/448 (23%), Positives = 145/448 (32%), Gaps = 74/448 (16%)
Query: 6 SVPPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTP------PQGM 59
+ PP P G P G + +T P+ G P G TP P+G
Sbjct: 1131 ATPPSPKGGLATPPPKGAPTTP-----AATPPSPKGGLATPPPKGAPTTPAATPPSPKGG 1185
Query: 60 SRAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQR--LPGSQPFGSPLAPV 117
P GAP A P + P++T + L P G+P P
Sbjct: 1186 LATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPAATPPSPKGGLATPSPKGAPTTPA 1245
Query: 118 GNQP-PVLQPYGPPPTSAQVATQLSGMQISGAVAPAP--------------PSSGLGFGP 162
P P P PPP A + + G +A P P G P
Sbjct: 1246 ATPPSPKGGPATPPPKGAPTPPAATPPSLKGGLATPPHKGAPNPAVVTPPSPKGGPATSP 1305
Query: 163 PTSLASASGSFPNSGLYGSYPQGQ--APPLSQAQGHPGIQTPQRSAPSQASSFTPPASGG 220
P + + P S P+G PP A P + P + TP + GG
Sbjct: 1306 PKGAPTPPAATPPS------PKGSPGTPPPKGAPTPPAVTPPSPKGTPTLPATTPSSKGG 1359
Query: 221 PRLPSMT-GPLLPGQS---FGGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQP 276
P PS GP P + GGP+++ P+ P P G + + PL P +P P
Sbjct: 1360 PTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDPTSPAVIPLSPKKAPATP 1419
Query: 277 -----GYQPQQNGSFGPARGPQSNYGGPY-------PAAPTFGSQPGPPQPLPPKRLDPD 324
P + PA P S P PA P+ P P PP +P
Sbjct: 1420 VTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKGGPATPSSKGDPTLPAVTPPSPKEP- 1478
Query: 325 AIPSPIQVIEDDRNNRGTEPFVTGVRGQVPPLVTTNFLVKDQGNASPRYIRCTSYNIPCT 384
P+P QV + P G P L P I + +P T
Sbjct: 1479 --PAPKQVATSSSPKKA--PATPAPMG-APTL--------------PAVIPSSPKEVPAT 1519
Query: 385 SDMAKQAQVPLAAVI--KPLARLPPEEA 410
+ P A ++ K A L P+EA
Sbjct: 1520 PSSRRDPIAPTATLLSKKTPATLAPKEA 1547
Score = 73.6 bits (179), Expect = 1e-12
Identities = 86/311 (27%), Positives = 106/311 (34%), Gaps = 44/311 (14%)
Query: 36 APAIPYGAYNGPVPGYQQTPPQGMSRAPPSSGAP--PASTAQAPCGQAAYGQFGQGDVQN 93
APA+ + + P P+G+ +P GAP PA+T +P G G
Sbjct: 908 APALSMTS-SSPKKARATPAPKGIPASPSPKGAPTPPAATPPSPKG---------GPATP 957
Query: 94 GPSSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAP 153
P P G P P P PP AT S AP P
Sbjct: 958 SPKWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATP------SPKGAPTP 1011
Query: 154 PSSGLGFGPPTSLAS-ASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASS 212
P+ PP+ S A+ FP S P PP +G P + AP+ ++
Sbjct: 1012 PA----VTPPSPKGSPAATPFPKGA---STPPAATPP--SPKGSPAATPLPKGAPTTPAA 1062
Query: 213 FTPPASGGPRLPSMTG-----PLLPGQSFGGPSVSQPNHVSSPPQALPP---GTQMTGPL 264
P GGP PS+ G P GGP+ P PP A PP G T P
Sbjct: 1063 TLPSPKGGPATPSLKGAPTPPAATPPSPKGGPATPSPKGAPMPPAATPPSPKGGLATPPH 1122
Query: 265 --GPLPPMHSPQQP----GYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPLPP 318
P P +P P P + PA P S GG A P P P PP
Sbjct: 1123 KGAPTTPAATPPSPKGGLATPPPKGAPTTPAATPPSPKGG--LATPPPKGAPTTPAATPP 1180
Query: 319 KRLDPDAIPSP 329
A PSP
Sbjct: 1181 SPKGGLATPSP 1191
Score = 68.2 bits (165), Expect = 4e-11
Identities = 82/330 (24%), Positives = 104/330 (31%), Gaps = 72/330 (21%)
Query: 31 QSGSTAPAIPYGAYNGPVP---------------GYQQTPPQGMSRAPPSSGAPPASTAQ 75
+ GS P P G + PV G + +P S PPS P +A
Sbjct: 811 KKGSAGPDTPIGNLSSPVSPVEASFLPENSLSFQGSKDSPATTHSPTPPSPKGAPTPSAV 870
Query: 76 APCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPPPTSAQ 135
P V P T + P P P Q P L P A+
Sbjct: 871 TPLSPKG--------VTLPPKETPTPSVVNLPFPKEGPATPAPKQAPALSMTSSSPKKAR 922
Query: 136 VATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQG 195
G+ PA PS G PT P PP +G
Sbjct: 923 ATPAPKGI-------PASPSPK---GAPT------------------PPAATPP--SPKG 952
Query: 196 HPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSF-----GGPSVSQPNHVSSP 250
P +P + AP+ ++ P GGP PS G P + GGP+ P +P
Sbjct: 953 GPATPSP-KWAPTPPAATPPSPKGGPATPSPKGAPTPPAATPPSPKGGPATPSPKGAPTP 1011
Query: 251 PQALPPGTQMTGPLGPL------PPMHSPQQPGYQP-----QQNGSFGPARGPQSNYGGP 299
P PP + + P PP +P P P + PA S GG
Sbjct: 1012 PAVTPPSPKGSPAATPFPKGASTPPAATPPSPKGSPAATPLPKGAPTTPAATLPSPKGG- 1070
Query: 300 YPAAPTFGSQPGPPQPLPPKRLDPDAIPSP 329
PA P+ P PP PP A PSP
Sbjct: 1071 -PATPSLKGAPTPPAATPPSPKGGPATPSP 1099
Score = 60.8 bits (146), Expect = 7e-09
Identities = 88/352 (25%), Positives = 121/352 (34%), Gaps = 61/352 (17%)
Query: 8 PPV--PPFGQPQPIYPGYHQSSYGG------QSGSTAPAIPYGAYNGPV---PGYQQTP- 55
PP PP + P P SS GG + G T PA GP P ++ P
Sbjct: 1335 PPAVTPPSPKGTPTLPATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPA 1394
Query: 56 ---PQGMSRAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPG-SQPFG 111
P+G +P P P + +GD+ + V +++ P S P G
Sbjct: 1395 IPSPKGDPTSPAVIPLSPKKAPATPVTREGAATPSKGDLTPPAVTPVSLKKAPATSAPKG 1454
Query: 112 SPLAPVGNQPPVLQPYGPP-----PTSAQVATQLSGMQISGAVAP--------------- 151
P P P L PP P QVAT S + AP
Sbjct: 1455 GPATPSSKGDPTLPAVTPPSPKEPPAPKQVATSSSPKKAPATPAPMGAPTLPAVIPSSPK 1514
Query: 152 ---APPSSGLG-FGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRS-- 205
A PSS P +L S + P P + P I TP+ +
Sbjct: 1515 EVPATPSSRRDPIAPTATLLSKKTPATLAPKEALIPPAMTVPSPKKT--PAIPTPKEAPA 1572
Query: 206 APSQASSFTPPA------SGGPRL------PSMTGPLLPGQSFGGPSVSQPNHVSSPPQA 253
PS + +PPA G P P++T P P ++ P+V+ P+ P
Sbjct: 1573 TPSSKEASSPPAVTPSTYKGAPSPKELLIPPAVTSPS-PKEAPTPPAVTPPSPEKGPATP 1631
Query: 254 LPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPT 305
P GT + P+ P SP P + G A PQ++ G P PT
Sbjct: 1632 APKGTPTSPPVTPSSLKDSPTSPASVTCKMG----ATVPQASKGLPAKKGPT 1679
Score = 47.0 bits (110), Expect = 1e-04
Identities = 72/295 (24%), Positives = 106/295 (35%), Gaps = 38/295 (12%)
Query: 8 PPVPPFGQPQPIYPGYHQSSYGGQS--GSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPS 65
PP P Q P+ S + S ST +P+ + T P+ + P
Sbjct: 47 PPCSPAPQQCPLSAANQASPFPSPSTIASTPLEVPFPQSSSGTALPLGTAPEAPTFLPNL 106
Query: 66 SGAP--PASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPPV 123
G P PA+ A A S + L G+ +PLA V P
Sbjct: 107 IGPPISPAALALA--------------------SPMIAPTLKGTPSSSAPLALVALAPHS 146
Query: 124 LQPYG--PP-----PTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNS 176
+Q PP P S VA S + +S +AP+ P + L P + + G+
Sbjct: 147 VQKSSAFPPNLLTSPPSVAVAESGSVITLSAPIAPSEPKTNLNKVPSEVVPNPKGTPSPP 206
Query: 177 GLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPS-MTGPLLPGQ- 234
+ + P P++ Q G+ + ++ P+ + P + S + P PG
Sbjct: 207 CIVSTVPYHCVTPMASIQS--GVASLPQTTPTTTLAIASPQVKDTTISSVLISPQNPGSL 264
Query: 235 SFGGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPG--YQPQQNGSFG 287
S GP VS P +S Q+LP T GP P P G P SFG
Sbjct: 265 SLKGP-VSPPAALSLSTQSLPVVTSSQKTAGPNTPPDFPISLGSHLAPLHQSSFG 318
Score = 35.4 bits (80), Expect = 0.30
Identities = 102/466 (21%), Positives = 160/466 (34%), Gaps = 74/466 (15%)
Query: 6 SVPPVPPFGQPQPIYPGYHQSSYG-----GQSGSTAPAIP---------------YGAYN 45
+ PP P + P HQSS+G GQ+G +A + P Y +
Sbjct: 296 NTPPDFPISLGSHLAP-LHQSSFGSVQLLGQTGPSALSDPTVKTISVDHSSTGASYPSQR 354
Query: 46 G---PVPGYQQTPPQGMSRAP---PSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTV 99
P+P + P ++ P PS P++ + C + P++++
Sbjct: 355 SVIPPLPSRNEVVPATVAAFPVVAPSVDKGPSTISSITCSPSGSLNVATS-FSLSPTTSL 413
Query: 100 QMQRLPGSQ---PFGS--PLAPVGNQPPVLQP----YGPPPTSAQVATQLSGMQISGAVA 150
++ P + P + P++ VG P V+ P T+ +VAT +S SG ++
Sbjct: 414 ILKSSPNATYHYPLVAQMPVSSVGTTPLVVTNPCTIAAAPTTTFEVATCVSPPMSSGPIS 473
Query: 151 PAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQR-SAPSQ 209
P+S +A + P++ + + +PPL + + + P+Q
Sbjct: 474 NIEPTSPAAL----VMAPVAPKEPSTQVATTLRIPVSPPLPDPEDLKNLPSSVLVKFPTQ 529
Query: 210 ASSFTPPAS--GGPRLPSMTG----------PLLPGQSFGGPSVSQPNHVSSPPQAL-PP 256
T PAS G P P+ G PL+ PS + SSP L P
Sbjct: 530 KDLQTVPASLEGAPFSPAQAGLTTKKDPTVLPLVQAAPKNSPSFQSTS--SSPEIPLSPE 587
Query: 257 GTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPP--Q 314
T LG P+ P P S S Y GP A P S P
Sbjct: 588 ATLAKKSLGEPLPIGKPASSMTSPLGVNSSASVIKTDS-YAGPDSAGPLLKSSLITPTVA 646
Query: 315 PLPPKRLDPDAIPSPIQVIEDDRNNRGTEPFVTGVRGQVPPLVTTNFLVKDQGNASPRYI 374
P + DP + +P PF+ G P N VK+ + +
Sbjct: 647 AFPLESADPAGV-APTTAKGTSTYTTTASPFLEGTVSLAP----KNHPVKEGTLTTLPLV 701
Query: 375 RCTSYNIPCTSDMAKQAQVPLAAVI--------KPLARLPPEEASP 412
S N P + + PLA ++ P LPP P
Sbjct: 702 PTASENCP-VAPSPQNTCAPLATLVLAPEIPKSVPSPSLPPAGTPP 746
>gi|56243590 WD repeat domain 33 isoform 1 [Homo sapiens]
Length = 1336
Score = 81.3 bits (199), Expect = 5e-15
Identities = 111/362 (30%), Positives = 123/362 (33%), Gaps = 86/362 (23%)
Query: 1 MNVNQSVPPVP--------PFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQ 52
MN+ Q PP P P GQ P P HQ GG G P P G G
Sbjct: 612 MNMAQMGPPGPQGQFRPPGPQGQMGPQGPPLHQGG-GGPQGFMGPQGPQGPPQGLPRPQD 670
Query: 53 QTPPQGMSRAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGS 112
PQGM R P G P G + GP + Q PG Q
Sbjct: 671 MHGPQGMQRHPGPHGPLGPQGPPGPQGSS------------GPQGHMGPQGPPGPQGHIG 718
Query: 113 PLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGS 172
P P G Q L P GPP T GMQ P P G P + GS
Sbjct: 719 PQGPPGPQGH-LGPQGPPGTQ--------GMQ-----GPPGPRGMQGPPHPHGIQGGPGS 764
Query: 173 FPNSGLYGSYPQGQAPPLSQA--QGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPL 230
G+ G QG L+ QG PG + Q AP PP M GP
Sbjct: 765 ---QGIQGPVSQGPLMGLNPRGMQGPPGPRENQGPAPQGMIMGHPPQE-------MRGPH 814
Query: 231 LPGQSFG-GPSVSQ-PNHVSS------------PPQAL--PPGTQMT-----GPLGPLPP 269
PG G GP + P + PPQ L PPG+Q G LGP P
Sbjct: 815 PPGGLLGHGPQEMRGPQEIRGMQGPPPQGSMLGPPQELRGPPGSQSQQGPPQGSLGPPPQ 874
Query: 270 MHSPQQPGYQPQQNGSFGPARGPQSNYG------------GPYPAAP--TFGSQPGPPQP 315
PG Q QQN PARGP + G G P AP G GPP
Sbjct: 875 GGMQGPPGPQGQQN----PARGPHPSQGPIPFQQQKTPLLGDGPRAPFNQEGQSTGPPPL 930
Query: 316 LP 317
+P
Sbjct: 931 IP 932
Score = 65.5 bits (158), Expect = 3e-10
Identities = 109/377 (28%), Positives = 128/377 (33%), Gaps = 88/377 (23%)
Query: 63 PPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQ-------------RLPGSQ- 108
PPSSG P P GQ Q QG Q PS + M R PG Q
Sbjct: 575 PPSSGTPLLGPQPFP-GQGPMSQIPQGFQQPHPSQQMPMNMAQMGPPGPQGQFRPPGPQG 633
Query: 109 ---PFGSPLAPVGNQPP-VLQPYGP--PPTSAQVATQLSGMQISGAVAPAPPSSGLGFGP 162
P G PL G P + P GP PP + G Q G P LG
Sbjct: 634 QMGPQGPPLHQGGGGPQGFMGPQGPQGPPQGLPRPQDMHGPQ--GMQRHPGPHGPLGPQG 691
Query: 163 PTSLASASGSFPNSGLYG-SYPQG----QAPPLSQA----QGHPGIQTPQRSAPSQASSF 213
P +SG + G G PQG Q PP Q QG PG Q Q P
Sbjct: 692 PPGPQGSSGPQGHMGPQGPPGPQGHIGPQGPPGPQGHLGPQGPPGTQGMQ-GPPGPRGMQ 750
Query: 214 TPP----ASGGPRLPSMTGPLLPGQSFG-------GPSVSQPNHVSSPPQALPPGTQMTG 262
PP GGP + GP+ G G GP + N PQ + G
Sbjct: 751 GPPHPHGIQGGPGSQGIQGPVSQGPLMGLNPRGMQGPPGPRENQ-GPAPQGMIMGHPPQE 809
Query: 263 PLGPLPP----MHSPQQ-------PGYQ--PQQNGSFGP---ARGP---QSNYGGPYPA- 302
GP PP H PQ+ G Q P Q GP RGP QS G P +
Sbjct: 810 MRGPHPPGGLLGHGPQEMRGPQEIRGMQGPPPQGSMLGPPQELRGPPGSQSQQGPPQGSL 869
Query: 303 -APTFGSQPGPPQPL----PPKRLDPDAIPSPIQ-------------VIEDDRNNRGTEP 344
P G GPP P P + P P P Q + + G P
Sbjct: 870 GPPPQGGMQGPPGPQGQQNPARGPHPSQGPIPFQQQKTPLLGDGPRAPFNQEGQSTGPPP 929
Query: 345 FVTGV-----RGQVPPL 356
+ G+ +G++PPL
Sbjct: 930 LIPGLGQQGAQGRIPPL 946
Score = 62.8 bits (151), Expect = 2e-09
Identities = 76/294 (25%), Positives = 96/294 (32%), Gaps = 58/294 (19%)
Query: 48 VPGYQQTPPQGMSRAPPSS-GAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPG 106
+ G Q PPQG PP PP S +Q Q + G QG +Q P
Sbjct: 833 IRGMQGPPPQGSMLGPPQELRGPPGSQSQQGPPQGSLGPPPQGGMQGPPG---------- 882
Query: 107 SQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAP-PSSGLGFGPPTS 165
P G Q P GP P+ + Q + G AP G GPP
Sbjct: 883 ---------PQGQQNPAR---GPHPSQGPIPFQQQKTPLLGDGPRAPFNQEGQSTGPPPL 930
Query: 166 LASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQ----ASSFTPPASGGP 221
+ P G G+ QG+ PPL+ QG + R P+ S SGGP
Sbjct: 931 I-------PGLGQQGA--QGRIPPLNPGQGPGPNKGDSRGPPNHHMGPMSERRHEQSGGP 981
Query: 222 RLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPG------------TQMTGPLGPLPP 269
GP GQ GP + H P P + G GPLP
Sbjct: 982 EHGPERGPFRGGQDCRGPPDRRGPHPDFPDDFSRPDDFHPDKRFGHRLREFEGRGGPLPQ 1041
Query: 270 MHSPQQPGYQP---------QQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQ 314
++ G P + G ARGP + G P F P P+
Sbjct: 1042 EEKWRRGGPGPPFPPDHREFSEGDGRGAARGPPGAWEGRRPGDERFPRDPEDPR 1095
Score = 39.3 bits (90), Expect = 0.021
Identities = 38/120 (31%), Positives = 43/120 (35%), Gaps = 20/120 (16%)
Query: 203 QRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPS----VSQPNHVSSPPQALPPGT 258
+R A Q PP S G PLL Q F G + Q P Q +P
Sbjct: 562 ERLAQKQVEQIQPPPSSGT-------PLLGPQPFPGQGPMSQIPQGFQQPHPSQQMPMNM 614
Query: 259 QMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQP-GPPQPLP 317
GP G PQ P G GP +GP + GG P P GPPQ LP
Sbjct: 615 AQMGPPG-------PQGQFRPPGPQGQMGP-QGPPLHQGGGGPQGFMGPQGPQGPPQGLP 666
>gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 1124
Score = 80.1 bits (196), Expect = 1e-14
Identities = 117/430 (27%), Positives = 150/430 (34%), Gaps = 91/430 (21%)
Query: 8 PPVPPFGQPQPIYPGYHQSSYGGQSG----STAPAIPYGAYNGPVPGYQQTPPQGMSRAP 63
P V P P I+P SS S S+ P + P QTPP ++ P
Sbjct: 475 PAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPP 534
Query: 64 ----PSSGAPPASTAQAP----------CGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQP 109
PS PP TA AP C Q + P T P Q
Sbjct: 535 LENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPLQAPPSPLTTPPPETPSSIATPPPQA 594
Query: 110 FGSPLAPV--GNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTS-L 166
+ +P G P L P PP A L +Q P+PP+S PP S L
Sbjct: 595 PPALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQ----APPSPPAS-----PPLSPL 645
Query: 167 ASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTP--QRSAPSQASSFTPPASGGPRLP 224
A+ S PN+ +PP S P +Q P ++P + S TPP+ P
Sbjct: 646 ATPSPQAPNALAVHLLQAPFSPPPS-----PPVQAPFSPPASPPVSPSATPPSQAPP--- 697
Query: 225 SMTGPLLPGQSFGGPSVSQPNHVSS--PPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQ 282
S+ P P Q P S P S+ PPQA PP + P PP P P P
Sbjct: 698 SLAAP--PLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATP-- 753
Query: 283 NGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPLPPKRLDPDAIPSPIQVIEDDRNNRGT 342
P R P P AAP P PP LP + P A P P
Sbjct: 754 -----PPRVP------PLLAAPPLQVPPSPPASLP---MSPLAKPPP------------- 786
Query: 343 EPFVTGVRGQVPPLVTTNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQAQVPLAAVIKPL 402
Q PP + T L Q SP + P + + A +P++ + P
Sbjct: 787 ---------QAPPALATPPL---QALPSP------PASFPGQAPFSPSASLPMSPLATPP 828
Query: 403 ARLPPEEASP 412
+ PP A+P
Sbjct: 829 PQAPPVLAAP 838
Score = 71.6 bits (174), Expect = 4e-12
Identities = 97/348 (27%), Positives = 125/348 (35%), Gaps = 62/348 (17%)
Query: 8 PPVPPFGQPQPIYPGYHQSSYGGQSGSTAPA----IPYGAYNGPVPGYQQTPPQGMSRAP 63
PP+ P P P P S P+ P+ P TPP S+AP
Sbjct: 640 PPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPP---SQAP 696
Query: 64 PSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPPV 123
PS APP +P Q P ++P S P P++P PP
Sbjct: 697 PSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPR 756
Query: 124 LQPY--GPP---PTSAQVATQLSGM-----QISGAVA-------PAPPSSGLGFGPPTSL 166
+ P PP P S + +S + Q A+A P+PP+S G P
Sbjct: 757 VPPLLAAPPLQVPPSPPASLPMSPLAKPPPQAPPALATPPLQALPSPPASFPGQAP---- 812
Query: 167 ASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSM 226
S S S P S L + P QAPP+ A P +Q P PS +S P PR P
Sbjct: 813 FSPSASLPMSPL--ATPPPQAPPVLAA---PLLQVP----PSPPAS---PTLQAPRRPPT 860
Query: 227 TGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPL-GPLPPMHS------PQQ-PGY 278
G P S GP ++ PP PP + L GP HS P++ GY
Sbjct: 861 PG---PDTSVSGPRLTLALAPGPPP---PPSRSPSSTLSGPDLAGHSSSATSTPEELRGY 914
Query: 279 QPQQNGSFGPARGPQSNYGGPYPAA--------PTFGSQPGPPQPLPP 318
G + P + +PAA F PG P P PP
Sbjct: 915 DSGPEGGAAASPPPDAELAACHPAAWSRGPAPPLAFRGAPGAPLPWPP 962
Score = 66.2 bits (160), Expect = 2e-10
Identities = 121/494 (24%), Positives = 169/494 (34%), Gaps = 115/494 (23%)
Query: 6 SVPPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPV--------PGYQQTPPQ 57
++PP PP P P+ P + Q+ + PA P + P Q PP
Sbjct: 330 TLPPSPPLATPLPLAPPSPSAPPSLQTLPSPPATPPSQAPPSMTTPPMQAPPSLQTIPPI 389
Query: 58 GM--SRAPPSSGAPPA----STAQA------PCGQAAYGQFGQGDVQNGPSSTVQMQRL- 104
+ S PS APP+ S+ QA P QA + Q S T +
Sbjct: 390 QVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASLTSPSRPAS 449
Query: 105 --PGSQPFGSPLAPVGNQP--PVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGF 160
P S P +PL+ + P L P P +S L + + +P P S L
Sbjct: 450 TPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSPQAPLSSLIM 509
Query: 161 GP---PTSLASASGSFPNSGL----YGSYPQGQAPPLSQAQGH---PGIQTPQRSAP--- 207
P +SLA S P + L + P PPL A P ++TP AP
Sbjct: 510 PPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLETPPCPAPCPL 569
Query: 208 -------------SQASSFTPPASGGPRL--PSMTG-PLLPGQSFGGPSVSQPNHVSSPP 251
+ +S TPP P L P + G P P P P ++ PP
Sbjct: 570 QAPPSPLTTPPPETPSSIATPPPQAPPALASPPLQGLPSPPLSPLATPPPQAPPXLALPP 629
Query: 252 QALPPGTQMTGPLGPL-------------------------PPMHSPQQPGYQPQQNGSF 286
PP + PL PL PP+ +P P P + S
Sbjct: 630 LQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSA 689
Query: 287 GP-ARGPQSNYGGPY------PAAPTFG-SQPGPPQPLPPKRLDPDAIPSPIQVIEDDRN 338
P ++ P S P PA+P S PPQ PP P +P P +
Sbjct: 690 TPPSQAPPSLAAPPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQVP-PSPPASPPMS 748
Query: 339 NRGTEPFVTGVRGQVPPLVTTNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQAQVPLAAV 398
T P +VPPL+ A+P P + A +P++ +
Sbjct: 749 PSATPP------PRVPPLL-----------AAP----------PLQVPPSPPASLPMSPL 781
Query: 399 IKPLARLPPEEASP 412
KP + PP A+P
Sbjct: 782 AKPPPQAPPALATP 795
Score = 42.4 bits (98), Expect = 0.002
Identities = 80/330 (24%), Positives = 113/330 (34%), Gaps = 62/330 (18%)
Query: 26 SSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSGAPPASTAQAPCGQAAYGQ 85
SS G SG+T P P G G ++T +G + P A A +
Sbjct: 115 SSPGRASGTTRPG-PLGQ-KGLRISAEETVARGKATEAPKRSALSAGARRDT-------- 164
Query: 86 FGQGDVQNGPSSTVQMQRLPGSQPFGSPL-APVGNQPPVLQPYGPPPTSAQVATQLSGMQ 144
G PS + + G P AP P P P S A++ S +
Sbjct: 165 --SGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRP---PTEGPRKSVSSASEHSTTE 219
Query: 145 ISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLS------------Q 192
S A A PS+G G P S + +S + P S S P + P + Q
Sbjct: 220 PSPA-ARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQ 278
Query: 193 AQGHPGIQTPQRSA-----PSQASSFTPPASGGPRL-----PSMTGPLLPGQSFGGPSVS 242
A P + P++ A P +S P+ G + P LP P ++
Sbjct: 279 ALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPPLA 338
Query: 243 QPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPA 302
P ++ P + PP Q T P P P P++ P S P A
Sbjct: 339 TPLPLAPPSPSAPPSLQ-TLPSPPATP------------------PSQAPPSMTTPPMQA 379
Query: 303 APTFGSQPGPPQPLPPKRLDP--DAIPSPI 330
P+ Q PP +P P A PSP+
Sbjct: 380 PPSL--QTIPPIQVPHSLTSPSLQAPPSPL 407
Score = 32.7 bits (73), Expect = 1.9
Identities = 59/238 (24%), Positives = 84/238 (35%), Gaps = 61/238 (25%)
Query: 122 PVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGS 181
P P PPP + L +GAV P LA +G + + S
Sbjct: 29 PPGSPRPPPPVTPAALRVLGA---AGAVGRKP------------LAERAGGIGGATIPES 73
Query: 182 YPQGQAPPLSQAQGHPGIQTPQRSA--PSQASSFTPPASG-GPRLPSMTGPLLPGQSFGG 238
P+ P RSA S+ + PPASG G R P P ++
Sbjct: 74 APRA---------------GPTRSAGTSSRNPASRPPASGRGERAP-------PAKN--- 108
Query: 239 PSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQP---GYQPQQNGSFGPARGPQSN 295
+ P VSSP +A GT GPLG S ++ G + + G + +
Sbjct: 109 ---TSPGPVSSPGRA--SGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRD 163
Query: 296 YGGPYPAAPT---------FGSQPGPPQPLPPKRLDPDAIPSPIQVIEDDRNNRGTEP 344
GP P P+ G++ G P+P P R P P + + + TEP
Sbjct: 164 TSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPT-EGPRKSVSSASEHSTTEP 220
>gi|116284398 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 75.1 bits (183), Expect = 3e-13
Identities = 94/322 (29%), Positives = 115/322 (35%), Gaps = 47/322 (14%)
Query: 33 GSTAPAIPYGAYNGPVPGYQQTPPQGMSRAP-PS----SGAPPASTAQAPCGQAAYGQFG 87
GS P +P G + + +PP G R P PS SG P + P + G
Sbjct: 123 GSRPPLLPPGGRSTSAKPF--SPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKP 180
Query: 88 QGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISG 147
PS+ +Q P ++ GSP P G + P P PPP T L G G
Sbjct: 181 DSIPPPVPSTPRPIQSSPHNR--GSPPVPGGPRQPSPGPT-PPPFPGNRGTALGG----G 233
Query: 148 AVAPAPPSSGLGFG-----PPT-SLASASGSFPNSGLYGSYP----QGQAPPLSQAQGHP 197
++ +P SS F PPT S A P G+ P + PP Q P
Sbjct: 234 SIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPP 293
Query: 198 GIQTPQRSAPSQASSFTPPAS--GGPRLP-------------------SMTGPLLPGQSF 236
TP+ SA SQA PP S G P LP S + P LP
Sbjct: 294 VPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGR 353
Query: 237 GGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNY 296
GP P+ PP PPG +GPL P PP+ G S
Sbjct: 354 SGPLPPPPSERPPPPVRDPPGR--SGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPR 411
Query: 297 GGPYPAAPTFGSQPGPPQPLPP 318
GP P P G P P PP
Sbjct: 412 SGPRPPLPPDRPSAGAPPPPPP 433
Score = 66.2 bits (160), Expect = 2e-10
Identities = 86/312 (27%), Positives = 110/312 (35%), Gaps = 25/312 (8%)
Query: 29 GGQSGSTAPAIPYGAYNGPVPGYQQTPPQ----GMSRAP---PSSGAPPASTAQAPCGQA 81
GG G P G + +P + T + G SR P P + A P G
Sbjct: 89 GGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPG 148
Query: 82 AYGQFGQGDVQNGPSSTVQMQRLPGSQP-FGSPLAPVGNQPPVLQPYGPPPTSAQVATQL 140
+ G ++GP Q R+P +P GS P PPV P P P + +
Sbjct: 149 RFPVPSPGH-RSGPPEP-QRNRMPPPRPDVGSK--PDSIPPPV--PSTPRPIQSSPHNRG 202
Query: 141 SGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQ 200
S G P+P + F A GS S L S P PPL
Sbjct: 203 SPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPP-------- 254
Query: 201 TPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPN-HVSSPPQALPPGTQ 259
TP R+ + PP P + P P Q+ P S P SS PP
Sbjct: 255 TPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPS 314
Query: 260 MTGPLGPLPPMHSPQQPGYQ-PQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPLPP 318
GP PLPP S + PQ+N S + P + G P P +P PP PP
Sbjct: 315 RPGP-PPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPP 373
Query: 319 KRLDPDAIPSPI 330
R P P P+
Sbjct: 374 GRSGPLPPPPPV 385
Score = 55.5 bits (132), Expect = 3e-07
Identities = 75/320 (23%), Positives = 111/320 (34%), Gaps = 71/320 (22%)
Query: 29 GGQSGSTAPAIPY---GAYNGPVPGYQQTPPQGM-SRAPP---------SSGAPPASTAQ 75
GG+S S P P G + P PG++ PP+ +R PP S PP +
Sbjct: 132 GGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTP 191
Query: 76 APCGQAAYGQFGQGDVQNGP---------------------SSTVQMQRLPGSQPFGS-- 112
P + + + G V GP +++ L S PF +
Sbjct: 192 RPIQSSPHNR-GSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRP 250
Query: 113 ----------------PLAPVGNQPPVLQPY--GPPPTSAQVATQLSGMQISGAVAPAPP 154
P PVGN+P + + PPP + + + + + AP PP
Sbjct: 251 PLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPP 310
Query: 155 SSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFT 214
GPP S+SG+ + P L Q TP +P ++
Sbjct: 311 PPPSRPGPPPLPPSSSGN------------DETPRLPQRNLSLSSSTPPLPSPGRSGPLP 358
Query: 215 PPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQ 274
PP S P P + P PG+S P + S +ALP Q+ G P P+
Sbjct: 359 PPPSERPP-PPVRDP--PGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPR 415
Query: 275 QPGYQPQQNGSFGPARGPQS 294
P P + + P P S
Sbjct: 416 PP-LPPDRPSAGAPPPPPPS 434
Score = 43.9 bits (102), Expect = 8e-04
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 25/107 (23%)
Query: 265 GPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQP----LPPKR 320
G PP+ PG + F P GP G +P P+ G + GPP+P +PP R
Sbjct: 123 GSRPPL---LPPGGRSTSAKPFSPPSGP-----GRFPV-PSPGHRSGPPEPQRNRMPPPR 173
Query: 321 LD----PDAIPSPI----QVIEDDRNNRGTEPFVTGVR----GQVPP 355
D PD+IP P+ + I+ +NRG+ P G R G PP
Sbjct: 174 PDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPP 220
>gi|38373695 WAS/WASL interacting protein family, member 1 [Homo
sapiens]
Length = 503
Score = 75.1 bits (183), Expect = 3e-13
Identities = 94/322 (29%), Positives = 115/322 (35%), Gaps = 47/322 (14%)
Query: 33 GSTAPAIPYGAYNGPVPGYQQTPPQGMSRAP-PS----SGAPPASTAQAPCGQAAYGQFG 87
GS P +P G + + +PP G R P PS SG P + P + G
Sbjct: 123 GSRPPLLPPGGRSTSAKPF--SPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKP 180
Query: 88 QGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISG 147
PS+ +Q P ++ GSP P G + P P PPP T L G G
Sbjct: 181 DSIPPPVPSTPRPIQSSPHNR--GSPPVPGGPRQPSPGPT-PPPFPGNRGTALGG----G 233
Query: 148 AVAPAPPSSGLGFG-----PPT-SLASASGSFPNSGLYGSYP----QGQAPPLSQAQGHP 197
++ +P SS F PPT S A P G+ P + PP Q P
Sbjct: 234 SIRQSPLSSSSPFSNRPPLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPP 293
Query: 198 GIQTPQRSAPSQASSFTPPAS--GGPRLP-------------------SMTGPLLPGQSF 236
TP+ SA SQA PP S G P LP S + P LP
Sbjct: 294 VPSTPRPSASSQAPPPPPPPSRPGPPPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGR 353
Query: 237 GGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNY 296
GP P+ PP PPG +GPL P PP+ G S
Sbjct: 354 SGPLPPPPSERPPPPVRDPPGR--SGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPR 411
Query: 297 GGPYPAAPTFGSQPGPPQPLPP 318
GP P P G P P PP
Sbjct: 412 SGPRPPLPPDRPSAGAPPPPPP 433
Score = 66.2 bits (160), Expect = 2e-10
Identities = 86/312 (27%), Positives = 110/312 (35%), Gaps = 25/312 (8%)
Query: 29 GGQSGSTAPAIPYGAYNGPVPGYQQTPPQ----GMSRAP---PSSGAPPASTAQAPCGQA 81
GG G P G + +P + T + G SR P P + A P G
Sbjct: 89 GGSFGGGGPPGLGGLFQAGMPKLRSTANRDNDSGGSRPPLLPPGGRSTSAKPFSPPSGPG 148
Query: 82 AYGQFGQGDVQNGPSSTVQMQRLPGSQP-FGSPLAPVGNQPPVLQPYGPPPTSAQVATQL 140
+ G ++GP Q R+P +P GS P PPV P P P + +
Sbjct: 149 RFPVPSPGH-RSGPPEP-QRNRMPPPRPDVGSK--PDSIPPPV--PSTPRPIQSSPHNRG 202
Query: 141 SGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQ 200
S G P+P + F A GS S L S P PPL
Sbjct: 203 SPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRPPLPP-------- 254
Query: 201 TPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPN-HVSSPPQALPPGTQ 259
TP R+ + PP P + P P Q+ P S P SS PP
Sbjct: 255 TPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPPPPPS 314
Query: 260 MTGPLGPLPPMHSPQQPGYQ-PQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPLPP 318
GP PLPP S + PQ+N S + P + G P P +P PP PP
Sbjct: 315 RPGP-PPLPPSSSGNDETPRLPQRNLSLSSSTPPLPSPGRSGPLPPPPSERPPPPVRDPP 373
Query: 319 KRLDPDAIPSPI 330
R P P P+
Sbjct: 374 GRSGPLPPPPPV 385
Score = 55.5 bits (132), Expect = 3e-07
Identities = 75/320 (23%), Positives = 111/320 (34%), Gaps = 71/320 (22%)
Query: 29 GGQSGSTAPAIPY---GAYNGPVPGYQQTPPQGM-SRAPP---------SSGAPPASTAQ 75
GG+S S P P G + P PG++ PP+ +R PP S PP +
Sbjct: 132 GGRSTSAKPFSPPSGPGRFPVPSPGHRSGPPEPQRNRMPPPRPDVGSKPDSIPPPVPSTP 191
Query: 76 APCGQAAYGQFGQGDVQNGP---------------------SSTVQMQRLPGSQPFGS-- 112
P + + + G V GP +++ L S PF +
Sbjct: 192 RPIQSSPHNR-GSPPVPGGPRQPSPGPTPPPFPGNRGTALGGGSIRQSPLSSSSPFSNRP 250
Query: 113 ----------------PLAPVGNQPPVLQPY--GPPPTSAQVATQLSGMQISGAVAPAPP 154
P PVGN+P + + PPP + + + + + AP PP
Sbjct: 251 PLPPTPSRALDDKPPPPPPPVGNRPSIHREAVPPPPPQNNKPPVPSTPRPSASSQAPPPP 310
Query: 155 SSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFT 214
GPP S+SG+ + P L Q TP +P ++
Sbjct: 311 PPPSRPGPPPLPPSSSGN------------DETPRLPQRNLSLSSSTPPLPSPGRSGPLP 358
Query: 215 PPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQ 274
PP S P P + P PG+S P + S +ALP Q+ G P P+
Sbjct: 359 PPPSERPP-PPVRDP--PGRSGPLPPPPPVSRNGSTSRALPATPQLPSRSGVDSPRSGPR 415
Query: 275 QPGYQPQQNGSFGPARGPQS 294
P P + + P P S
Sbjct: 416 PP-LPPDRPSAGAPPPPPPS 434
Score = 43.9 bits (102), Expect = 8e-04
Identities = 36/107 (33%), Positives = 49/107 (45%), Gaps = 25/107 (23%)
Query: 265 GPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQP----LPPKR 320
G PP+ PG + F P GP G +P P+ G + GPP+P +PP R
Sbjct: 123 GSRPPL---LPPGGRSTSAKPFSPPSGP-----GRFPV-PSPGHRSGPPEPQRNRMPPPR 173
Query: 321 LD----PDAIPSPI----QVIEDDRNNRGTEPFVTGVR----GQVPP 355
D PD+IP P+ + I+ +NRG+ P G R G PP
Sbjct: 174 PDVGSKPDSIPPPVPSTPRPIQSSPHNRGSPPVPGGPRQPSPGPTPP 220
>gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo
sapiens]
Length = 855
Score = 74.7 bits (182), Expect = 4e-13
Identities = 99/394 (25%), Positives = 139/394 (35%), Gaps = 44/394 (11%)
Query: 47 PVPGYQQTPPQGMSRAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPG 106
P P + PP R SS + ++T +P + G +Q S ++ P
Sbjct: 192 PAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPS--AGGGLQRPASRSLSSSATPL 249
Query: 107 SQPF-------GSPLAPVGNQPPV---LQPYGPP---PTSAQVATQLSGMQISGAVAPAP 153
S P G+P AP P LQ PP P A L + S P+P
Sbjct: 250 SSPARSGPSARGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSP 309
Query: 154 PSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQT---PQRSAPSQA 210
++ PPT A+ S L + P APP A P +QT P + PSQA
Sbjct: 310 SAALQSQAPPTLPATPHSSSLTCQL--ATPLPLAPPSPSAP--PSLQTLPSPPATPPSQA 365
Query: 211 SSFTPPASGGPRLPSMTG--PLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLGPLP 268
++ + G P L + P P P P ++ PP PP + PL PL
Sbjct: 366 TT----SLGSPTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLA 421
Query: 269 PMHSPQQPGYQPQQ--NGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPLPPKRLDPDAI 326
SPQ P F P P PA+P P P PP + P
Sbjct: 422 TP-SPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASP-----PVSPSATPPSQAPPSLA 475
Query: 327 PSPIQVIEDDRNNRGTEPFVTGVRGQVPPLVTTNF-LVKDQGNASP-------RYIRCTS 378
P+QV + P T PPL L K A P + +
Sbjct: 476 APPLQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPP 535
Query: 379 YNIPCTSDMAKQAQVPLAAVIKPLARLPPEEASP 412
+ P + + A +P++ + P + PP A+P
Sbjct: 536 ASFPGQAPFSPSASLPMSPLATPPPQAPPVLAAP 569
Score = 74.3 bits (181), Expect = 6e-13
Identities = 86/325 (26%), Positives = 119/325 (36%), Gaps = 46/325 (14%)
Query: 8 PPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSG 67
P PP Q P P S GS + P TPP +APP+
Sbjct: 345 PSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPP---QAPPALA 401
Query: 68 APPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQP--PVLQ 125
PP +P Q + V + + P S P P+ + P P +
Sbjct: 402 LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVS 461
Query: 126 PYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQG 185
P PP+ A + +Q V P+PP+S PP S ++ P
Sbjct: 462 PSATPPSQAPPSLAAPPLQ----VPPSPPAS-----PPMSPSAT-------------PPP 499
Query: 186 QAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQP- 244
QAPP A + P ++ P+ A TPP P P+ PGQ+ PS S P
Sbjct: 500 QAPPPLAAPPLQLAKPPPQAPPALA---TPPLQALPSPPAS----FPGQAPFSPSASLPM 552
Query: 245 NHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAP 304
+ +++PP PP + PL +PP P P Q + P GP ++ GP
Sbjct: 553 SPLATPPPQAPP--VLAAPLLQVPPS-PPASPTLQAPRRP---PTPGPDTSVSGP---RL 603
Query: 305 TFGSQPGPPQPLPPKRLDPDAIPSP 329
T PGPP PP R + P
Sbjct: 604 TLALAPGPPP--PPSRSPSSTLSGP 626
Score = 61.2 bits (147), Expect = 5e-09
Identities = 94/388 (24%), Positives = 130/388 (33%), Gaps = 87/388 (22%)
Query: 12 PFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGP-------VPGYQQTP-PQGMSRAP 63
P + +P G Q S+A + A +GP P + P P+G+
Sbjct: 222 PAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALR 281
Query: 64 PSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPG--SQPFGS--------- 112
P PP A G + PS+ +Q Q P + P S
Sbjct: 282 PPQVTPPRKDAAPALGPLSSSPLATPS----PSAALQSQAPPTLPATPHSSSLTCQLATP 337
Query: 113 -PLAPVG-NQPPVLQPYGPPPTS--AQVATQLSG--MQISGAVAPAPPSSGLGFGPPTS- 165
PLAP + PP LQ PP + +Q T L +Q + + P+PP S L PP +
Sbjct: 338 LPLAPPSPSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPPQAP 397
Query: 166 ----------------------LASASGSFPNS----------------GLYGSYPQGQA 187
LA+ S PN+ + + +
Sbjct: 398 PALALPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPAS 457
Query: 188 PPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHV 247
PP+S + P P +AP +PPAS P M+ P P + P +
Sbjct: 458 PPVSPSATPPSQAPPSLAAPPLQVPPSPPAS-----PPMSPSATPPPQAPPPLAAPPLQL 512
Query: 248 SSPPQALPPGTQMTGPLG--PLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPT 305
+ PP PP T PL P PP P Q + P A P S P P AP
Sbjct: 513 AKPPPQAPPALA-TPPLQALPSPPASFPGQAPFSPS-------ASLPMSPLATPPPQAPP 564
Query: 306 FGSQP----GPPQPLPPKRLDPDAIPSP 329
+ P P P P P P+P
Sbjct: 565 VLAAPLLQVPPSPPASPTLQAPRRPPTP 592
Score = 47.4 bits (111), Expect = 8e-05
Identities = 65/274 (23%), Positives = 95/274 (34%), Gaps = 61/274 (22%)
Query: 8 PPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSG 67
PP+ P P P P AP + P TPP +PP+S
Sbjct: 489 PPMSPSATPPPQAP----------PPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASF 538
Query: 68 APPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPPV---- 123
P +P Q P + ++P S P SP +PP
Sbjct: 539 --PGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPP-ASPTLQAPRRPPTPGPD 595
Query: 124 -----------LQPYGPPPTSAQVATQLSGMQISG--AVAPAPPSSGLGFGPPTSLASAS 170
L P PPP S ++ LSG ++G + A + P G+ +A+
Sbjct: 596 TSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAA 655
Query: 171 GSFPNSGLYGSYP----QGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSM 226
P++ L +P +G APPL+ +G PG P PPA+G
Sbjct: 656 SPPPDAELAACHPAAWSRGPAPPLA-FRGAPGAPLP-----------WPPATG------- 696
Query: 227 TGPLLPGQSFGGPSVSQ---PNHVSSPPQALPPG 257
PG + G ++ + P + P AL PG
Sbjct: 697 -----PGSADGLCTIYETEGPESATPAPGALDPG 725
Score = 32.7 bits (73), Expect = 1.9
Identities = 59/238 (24%), Positives = 84/238 (35%), Gaps = 61/238 (25%)
Query: 122 PVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGS 181
P P PPP + L +GAV P LA +G + + S
Sbjct: 29 PPGSPRPPPPVTPAALRVLGA---AGAVGRKP------------LAERAGGIGGATIPES 73
Query: 182 YPQGQAPPLSQAQGHPGIQTPQRSA--PSQASSFTPPASG-GPRLPSMTGPLLPGQSFGG 238
P+ P RSA S+ + PPASG G R P P ++
Sbjct: 74 APRA---------------GPTRSAGTSSRNPASRPPASGRGERAP-------PAKN--- 108
Query: 239 PSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQP---GYQPQQNGSFGPARGPQSN 295
+ P VSSP +A GT GPLG S ++ G + + G + +
Sbjct: 109 ---TSPGPVSSPGRA--SGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRD 163
Query: 296 YGGPYPAAPT---------FGSQPGPPQPLPPKRLDPDAIPSPIQVIEDDRNNRGTEP 344
GP P P+ G++ G P+P P R P P + + + TEP
Sbjct: 164 TSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPT-EGPRKSVSSASEHSTTEP 220
>gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo
sapiens]
Length = 816
Score = 74.3 bits (181), Expect = 6e-13
Identities = 86/325 (26%), Positives = 119/325 (36%), Gaps = 46/325 (14%)
Query: 8 PPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSG 67
P PP Q P P S GS + P TPP +APP+
Sbjct: 306 PSAPPSLQTLPSPPATPPSQATTSLGSPTLQATHSFLPSPPLSPLATPPP---QAPPALA 362
Query: 68 APPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQP--PVLQ 125
PP +P Q + V + + P S P P+ + P P +
Sbjct: 363 LPPLQAPPSPPASPPLSPLATPSPQAPNALAVHLLQAPFSPPPSPPVQAPFSPPASPPVS 422
Query: 126 PYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQG 185
P PP+ A + +Q V P+PP+S PP S ++ P
Sbjct: 423 PSATPPSQAPPSLAAPPLQ----VPPSPPAS-----PPMSPSAT-------------PPP 460
Query: 186 QAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQP- 244
QAPP A + P ++ P+ A TPP P P+ PGQ+ PS S P
Sbjct: 461 QAPPPLAAPPLQLAKPPPQAPPALA---TPPLQALPSPPAS----FPGQAPFSPSASLPM 513
Query: 245 NHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAP 304
+ +++PP PP + PL +PP P P Q + P GP ++ GP
Sbjct: 514 SPLATPPPQAPP--VLAAPLLQVPPS-PPASPTLQAPRRP---PTPGPDTSVSGP---RL 564
Query: 305 TFGSQPGPPQPLPPKRLDPDAIPSP 329
T PGPP PP R + P
Sbjct: 565 TLALAPGPPP--PPSRSPSSTLSGP 587
Score = 67.4 bits (163), Expect = 7e-11
Identities = 92/378 (24%), Positives = 131/378 (34%), Gaps = 42/378 (11%)
Query: 47 PVPGYQQTPPQGMSRAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPG 106
P P + PP R SS + ++T +P + G +Q S ++ P
Sbjct: 183 PAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRPS--AGGGLQRPASRSLSSSATPL 240
Query: 107 SQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSL 166
S P S + G P P P Q L Q++ A P+ G P L
Sbjct: 241 SSPARSGPSARGTPRAPAHPSQPKPKGLQA---LRPPQVTPPRKDAAPALGPLSSSP--L 295
Query: 167 ASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSM 226
A+ S S P P APP Q + +P + PSQA++ + G P L +
Sbjct: 296 ATPSPSAP--------PSPSAPPSLQT-----LPSPPATPPSQATT----SLGSPTLQAT 338
Query: 227 TG--PLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQ-- 282
P P P P ++ PP PP + PL PL SPQ P
Sbjct: 339 HSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATP-SPQAPNALAVHLL 397
Query: 283 NGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPLPPKRLDPDAIPSPIQVIEDDRNNRGT 342
F P P PA+P P P PP + P P+QV +
Sbjct: 398 QAPFSPPPSPPVQAPFSPPASP-----PVSPSATPPSQAPPSLAAPPLQVPPSPPASPPM 452
Query: 343 EPFVTGVRGQVPPLVTTNF-LVKDQGNASP-------RYIRCTSYNIPCTSDMAKQAQVP 394
P T PPL L K A P + + + P + + A +P
Sbjct: 453 SPSATPPPQAPPPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASFPGQAPFSPSASLP 512
Query: 395 LAAVIKPLARLPPEEASP 412
++ + P + PP A+P
Sbjct: 513 MSPLATPPPQAPPVLAAP 530
Score = 65.5 bits (158), Expect = 3e-10
Identities = 85/354 (24%), Positives = 118/354 (33%), Gaps = 49/354 (13%)
Query: 12 PFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGP-------VPGYQQTP-PQGMSRAP 63
P + +P G Q S+A + A +GP P + P P+G+
Sbjct: 213 PAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSARGTPRAPAHPSQPKPKGLQALR 272
Query: 64 PSSGAPPASTAQAPCGQAAYGQFG--QGDVQNGPSSTVQMQRLPG---------SQPFGS 112
P PP A G + PS+ +Q LP + GS
Sbjct: 273 PPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPPSLQTLPSPPATPPSQATTSLGS 332
Query: 113 PLAPVGNQ---PPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTS---- 165
P + P L P PP A A L +Q + +PP S L P +
Sbjct: 333 PTLQATHSFLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNAL 392
Query: 166 ----LASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGP 221
L + P+ + + +PP+S + P P +AP +PPAS
Sbjct: 393 AVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPAS--- 449
Query: 222 RLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLG--PLPPMHSPQQPGYQ 279
P M+ P P + P ++ PP PP T PL P PP P Q +
Sbjct: 450 --PPMSPSATPPPQAPPPLAAPPLQLAKPPPQAPPALA-TPPLQALPSPPASFPGQAPFS 506
Query: 280 PQQNGSFGPARGPQSNYGGPYPAAPTFGSQP----GPPQPLPPKRLDPDAIPSP 329
P A P S P P AP + P P P P P P+P
Sbjct: 507 PS-------ASLPMSPLATPPPQAPPVLAAPLLQVPPSPPASPTLQAPRRPPTP 553
Score = 47.4 bits (111), Expect = 8e-05
Identities = 65/274 (23%), Positives = 95/274 (34%), Gaps = 61/274 (22%)
Query: 8 PPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSG 67
PP+ P P P P AP + P TPP +PP+S
Sbjct: 450 PPMSPSATPPPQAP----------PPLAAPPLQLAKPPPQAPPALATPPLQALPSPPASF 499
Query: 68 APPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPPV---- 123
P +P Q P + ++P S P SP +PP
Sbjct: 500 --PGQAPFSPSASLPMSPLATPPPQAPPVLAAPLLQVPPSPP-ASPTLQAPRRPPTPGPD 556
Query: 124 -----------LQPYGPPPTSAQVATQLSGMQISG--AVAPAPPSSGLGFGPPTSLASAS 170
L P PPP S ++ LSG ++G + A + P G+ +A+
Sbjct: 557 TSVSGPRLTLALAPGPPPPPSRSPSSTLSGPDLAGHSSSATSTPEELRGYDSGPEGGAAA 616
Query: 171 GSFPNSGLYGSYP----QGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSM 226
P++ L +P +G APPL+ +G PG P PPA+G
Sbjct: 617 SPPPDAELAACHPAAWSRGPAPPLA-FRGAPGAPLP-----------WPPATG------- 657
Query: 227 TGPLLPGQSFGGPSVSQ---PNHVSSPPQALPPG 257
PG + G ++ + P + P AL PG
Sbjct: 658 -----PGSADGLCTIYETEGPESATPAPGALDPG 686
Score = 36.6 bits (83), Expect = 0.13
Identities = 99/439 (22%), Positives = 138/439 (31%), Gaps = 131/439 (29%)
Query: 94 GPSSTVQMQRLPG---SQPFGSPLAPVGNQPPVLQPYGPP-------------------- 130
G ++ R PG +P GSP P P L+ G
Sbjct: 11 GAAARTPAARAPGLLTPRPPGSPRPPPPVTPAALRVLGAAGAVGRKPLAERAGGIGGATI 70
Query: 131 PTSAQVA--TQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGS-----FPNSGL----- 178
P SA A T+ S SG APP+ GP +S ASG+ GL
Sbjct: 71 PESAPRAGPTRTSRPPASGRGERAPPAKNTSPGPVSSPGRASGTTRPGPLGQKGLRISAE 130
Query: 179 -------------------------YGSYPQGQAPPLSQ-----------------AQGH 196
G P +P +++ A+
Sbjct: 131 ETVARGKATEAPKRSALSAGARRDTSGPTPGTPSPAMARRSRAAGTEVGLPRPAPSARPR 190
Query: 197 PGIQTPQRSA----------PSQASSFTPPASGGPRLPS----------MTGPLLPGQSF 236
P + P++S PS A+ P A GG + P+ ++ P G S
Sbjct: 191 PPTEGPRKSVSSASEHSTTEPSPAARRRPSAGGGLQRPASRSLSSSATPLSSPARSGPSA 250
Query: 237 GG-------PSVSQPNHVSS--PPQALPPGTQMTGPLGPL-------PPMHSPQQPGYQP 280
G PS +P + + PPQ PP LGPL P +P P P
Sbjct: 251 RGTPRAPAHPSQPKPKGLQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAPPSPSAPP 310
Query: 281 QQNGSFGPARGPQS----NYGGPYPAAPTFGSQPGPP-QPL--PPKRLDPDAIPSPIQVI 333
P P S + G P A T P PP PL PP + P P+Q
Sbjct: 311 SLQTLPSPPATPPSQATTSLGSPTLQA-THSFLPSPPLSPLATPPPQAPPALALPPLQAP 369
Query: 334 EDDRNNRGTEPFVTGVRGQVPPLVTTNFLVKDQGNASPRYIRCTSYNIPCTSDMAKQAQV 393
+ P T Q P + + L Q SP + P + + A
Sbjct: 370 PSPPASPPLSPLAT-PSPQAPNALAVHLL---QAPFSP------PPSPPVQAPFSPPASP 419
Query: 394 PLAAVIKPLARLPPEEASP 412
P++ P ++ PP A+P
Sbjct: 420 PVSPSATPPSQAPPSLAAP 438
>gi|112382226 atrophin-1 like protein isoform b [Homo sapiens]
Length = 1012
Score = 74.3 bits (181), Expect = 6e-13
Identities = 96/309 (31%), Positives = 109/309 (35%), Gaps = 35/309 (11%)
Query: 34 STAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSGAPPASTAQAPCG--QAAYGQFGQGDV 91
S P P GP P PPQG A + P A TA P Q A Q
Sbjct: 199 SAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPP 258
Query: 92 Q----NGPSSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPP-PTSAQVATQLSGMQIS 146
PS +Q L GS G P AP QPP L GPP P S Q L Q
Sbjct: 259 SPHPPPHPSPHPPLQPLTGSA--GQPSAPSHAQPP-LHGQGPPGPHSLQAGPLL---QHP 312
Query: 147 GAVAP--APPSSG-----LGFGPPTSLASASGSFP--NSGLYGSYPQGQAP----PLSQA 193
G P PP + LG P + S P S L P + P PL+
Sbjct: 313 GPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMP 372
Query: 194 QGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQA 253
P TP P+ + PP GP SM L P + S +H PP A
Sbjct: 373 HIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHH---PPSA 429
Query: 254 LPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQP--- 310
PP Q+ PLP + Q PG QN PA P + P P F P
Sbjct: 430 HPPPLQLMPQSQPLPSSPA-QPPGLTQSQNLPPPPASHPPTGLHQVAP-QPPFAQHPFVP 487
Query: 311 -GPPQPLPP 318
GPP PP
Sbjct: 488 GGPPPITPP 496
Score = 49.7 bits (117), Expect = 2e-05
Identities = 61/201 (30%), Positives = 72/201 (35%), Gaps = 16/201 (7%)
Query: 139 QLSGMQISGAVAPAPPSSGLG---FGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQG 195
Q +Q V PAP S+ G P SA+ P GS QAP QA
Sbjct: 183 QPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQ----GSPTASQAPNQPQAPT 238
Query: 196 HPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQAL- 254
P T + AP+ PP+ P PS PL P G S P+H P
Sbjct: 239 APVPHTHIQQAPALHPQ-RPPSPHPPPHPSPHPPLQPLTGSAGQP-SAPSHAQPPLHGQG 296
Query: 255 PPGTQ--MTGPL----GPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGS 308
PPG GPL GP P P Q G+ A P ++ P +
Sbjct: 297 PPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQ 356
Query: 309 QPGPPQPLPPKRLDPDAIPSP 329
QP QPLPP L I P
Sbjct: 357 QPPREQPLPPAPLAMPHIKPP 377
Score = 36.2 bits (82), Expect = 0.17
Identities = 61/224 (27%), Positives = 73/224 (32%), Gaps = 45/224 (20%)
Query: 8 PPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSG 67
PP P Q H G S + A N P P + + PPS+
Sbjct: 377 PPTTPIPQLPAPQAHKHPPHLSGPSPFSMNA------NLPPPPALKPLSSLSTHHPPSAH 430
Query: 68 APPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSP--LAPVGNQPPVLQ 125
PP P Q Q P Q Q LP P L V QPP Q
Sbjct: 431 PPPLQLM--PQSQPLPSSPAQ------PPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQ 482
Query: 126 ----PYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGS 181
P GPPP + S + PA P G PP S A+ASG GS
Sbjct: 483 HPFVPGGPPPITPPTCP-------STSTPPAGP--GTSAQPPCSGAAASG--------GS 525
Query: 182 YPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPS 225
G + PL P +Q + + +PP PR PS
Sbjct: 526 IAGGSSCPL------PTVQIKEEALDDAEEPESPPPP--PRSPS 561
Score = 33.5 bits (75), Expect = 1.1
Identities = 35/109 (32%), Positives = 41/109 (37%), Gaps = 20/109 (18%)
Query: 239 PSVSQPNHVSSPPQALPPGTQMTGPLGP------LPPMHSP--QQPGYQPQ--------Q 282
P++ P V+ P + PPGT GP +PP SP Q QPQ
Sbjct: 185 PALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHT 244
Query: 283 NGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPLPPKRLDPDAIPSPIQ 331
+ PA PQ P P P S P QPL P A PS Q
Sbjct: 245 HIQQAPALHPQR---PPSPHPPPHPSPHPPLQPLTGSAGQPSA-PSHAQ 289
>gi|112382224 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 74.3 bits (181), Expect = 6e-13
Identities = 96/309 (31%), Positives = 109/309 (35%), Gaps = 35/309 (11%)
Query: 34 STAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSGAPPASTAQAPCG--QAAYGQFGQGDV 91
S P P GP P PPQG A + P A TA P Q A Q
Sbjct: 753 SAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPP 812
Query: 92 Q----NGPSSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPP-PTSAQVATQLSGMQIS 146
PS +Q L GS G P AP QPP L GPP P S Q L Q
Sbjct: 813 SPHPPPHPSPHPPLQPLTGSA--GQPSAPSHAQPP-LHGQGPPGPHSLQAGPLL---QHP 866
Query: 147 GAVAP--APPSSG-----LGFGPPTSLASASGSFP--NSGLYGSYPQGQAP----PLSQA 193
G P PP + LG P + S P S L P + P PL+
Sbjct: 867 GPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMP 926
Query: 194 QGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQA 253
P TP P+ + PP GP SM L P + S +H PP A
Sbjct: 927 HIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHH---PPSA 983
Query: 254 LPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQP--- 310
PP Q+ PLP + Q PG QN PA P + P P F P
Sbjct: 984 HPPPLQLMPQSQPLPSSPA-QPPGLTQSQNLPPPPASHPPTGLHQVAP-QPPFAQHPFVP 1041
Query: 311 -GPPQPLPP 318
GPP PP
Sbjct: 1042 GGPPPITPP 1050
Score = 49.7 bits (117), Expect = 2e-05
Identities = 61/201 (30%), Positives = 72/201 (35%), Gaps = 16/201 (7%)
Query: 139 QLSGMQISGAVAPAPPSSGLG---FGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQG 195
Q +Q V PAP S+ G P SA+ P GS QAP QA
Sbjct: 737 QPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQ----GSPTASQAPNQPQAPT 792
Query: 196 HPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQAL- 254
P T + AP+ PP+ P PS PL P G S P+H P
Sbjct: 793 APVPHTHIQQAPALHPQ-RPPSPHPPPHPSPHPPLQPLTGSAGQP-SAPSHAQPPLHGQG 850
Query: 255 PPGTQ--MTGPL----GPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGS 308
PPG GPL GP P P Q G+ A P ++ P +
Sbjct: 851 PPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQ 910
Query: 309 QPGPPQPLPPKRLDPDAIPSP 329
QP QPLPP L I P
Sbjct: 911 QPPREQPLPPAPLAMPHIKPP 931
Score = 36.2 bits (82), Expect = 0.17
Identities = 61/224 (27%), Positives = 73/224 (32%), Gaps = 45/224 (20%)
Query: 8 PPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSG 67
PP P Q H G S + A N P P + + PPS+
Sbjct: 931 PPTTPIPQLPAPQAHKHPPHLSGPSPFSMNA------NLPPPPALKPLSSLSTHHPPSAH 984
Query: 68 APPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSP--LAPVGNQPPVLQ 125
PP P Q Q P Q Q LP P L V QPP Q
Sbjct: 985 PPPLQLM--PQSQPLPSSPAQ------PPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQ 1036
Query: 126 ----PYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGS 181
P GPPP + S + PA P G PP S A+ASG GS
Sbjct: 1037 HPFVPGGPPPITPPTCP-------STSTPPAGP--GTSAQPPCSGAAASG--------GS 1079
Query: 182 YPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPS 225
G + PL P +Q + + +PP PR PS
Sbjct: 1080 IAGGSSCPL------PTVQIKEEALDDAEEPESPPPP--PRSPS 1115
Score = 33.5 bits (75), Expect = 1.1
Identities = 35/109 (32%), Positives = 41/109 (37%), Gaps = 20/109 (18%)
Query: 239 PSVSQPNHVSSPPQALPPGTQMTGPLGP------LPPMHSP--QQPGYQPQ--------Q 282
P++ P V+ P + PPGT GP +PP SP Q QPQ
Sbjct: 739 PALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHT 798
Query: 283 NGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPLPPKRLDPDAIPSPIQ 331
+ PA PQ P P P S P QPL P A PS Q
Sbjct: 799 HIQQAPALHPQR---PPSPHPPPHPSPHPPLQPLTGSAGQPSA-PSHAQ 843
>gi|112382216 atrophin-1 like protein isoform a [Homo sapiens]
Length = 1566
Score = 74.3 bits (181), Expect = 6e-13
Identities = 96/309 (31%), Positives = 109/309 (35%), Gaps = 35/309 (11%)
Query: 34 STAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSGAPPASTAQAPCG--QAAYGQFGQGDV 91
S P P GP P PPQG A + P A TA P Q A Q
Sbjct: 753 SAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHTHIQQAPALHPQRPP 812
Query: 92 Q----NGPSSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPP-PTSAQVATQLSGMQIS 146
PS +Q L GS G P AP QPP L GPP P S Q L Q
Sbjct: 813 SPHPPPHPSPHPPLQPLTGSA--GQPSAPSHAQPP-LHGQGPPGPHSLQAGPLL---QHP 866
Query: 147 GAVAP--APPSSG-----LGFGPPTSLASASGSFP--NSGLYGSYPQGQAP----PLSQA 193
G P PP + LG P + S P S L P + P PL+
Sbjct: 867 GPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQQPPREQPLPPAPLAMP 926
Query: 194 QGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQA 253
P TP P+ + PP GP SM L P + S +H PP A
Sbjct: 927 HIKPPPTTPIPQLPAPQAHKHPPHLSGPSPFSMNANLPPPPALKPLSSLSTHH---PPSA 983
Query: 254 LPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQP--- 310
PP Q+ PLP + Q PG QN PA P + P P F P
Sbjct: 984 HPPPLQLMPQSQPLPSSPA-QPPGLTQSQNLPPPPASHPPTGLHQVAP-QPPFAQHPFVP 1041
Query: 311 -GPPQPLPP 318
GPP PP
Sbjct: 1042 GGPPPITPP 1050
Score = 49.7 bits (117), Expect = 2e-05
Identities = 61/201 (30%), Positives = 72/201 (35%), Gaps = 16/201 (7%)
Query: 139 QLSGMQISGAVAPAPPSSGLG---FGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQG 195
Q +Q V PAP S+ G P SA+ P GS QAP QA
Sbjct: 737 QPPALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQ----GSPTASQAPNQPQAPT 792
Query: 196 HPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQAL- 254
P T + AP+ PP+ P PS PL P G S P+H P
Sbjct: 793 APVPHTHIQQAPALHPQ-RPPSPHPPPHPSPHPPLQPLTGSAGQP-SAPSHAQPPLHGQG 850
Query: 255 PPGTQ--MTGPL----GPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGS 308
PPG GPL GP P P Q G+ A P ++ P +
Sbjct: 851 PPGPHSLQAGPLLQHPGPPQPFGLPPQASQGQAPLGTSPAAAYPHTSLQLPASQSALQSQ 910
Query: 309 QPGPPQPLPPKRLDPDAIPSP 329
QP QPLPP L I P
Sbjct: 911 QPPREQPLPPAPLAMPHIKPP 931
Score = 36.2 bits (82), Expect = 0.17
Identities = 61/224 (27%), Positives = 73/224 (32%), Gaps = 45/224 (20%)
Query: 8 PPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSG 67
PP P Q H G S + A N P P + + PPS+
Sbjct: 931 PPTTPIPQLPAPQAHKHPPHLSGPSPFSMNA------NLPPPPALKPLSSLSTHHPPSAH 984
Query: 68 APPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSP--LAPVGNQPPVLQ 125
PP P Q Q P Q Q LP P L V QPP Q
Sbjct: 985 PPPLQLM--PQSQPLPSSPAQ------PPGLTQSQNLPPPPASHPPTGLHQVAPQPPFAQ 1036
Query: 126 ----PYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGS 181
P GPPP + S + PA P G PP S A+ASG GS
Sbjct: 1037 HPFVPGGPPPITPPTCP-------STSTPPAGP--GTSAQPPCSGAAASG--------GS 1079
Query: 182 YPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPS 225
G + PL P +Q + + +PP PR PS
Sbjct: 1080 IAGGSSCPL------PTVQIKEEALDDAEEPESPPPP--PRSPS 1115
Score = 33.5 bits (75), Expect = 1.1
Identities = 35/109 (32%), Positives = 41/109 (37%), Gaps = 20/109 (18%)
Query: 239 PSVSQPNHVSSPPQALPPGTQMTGPLGP------LPPMHSP--QQPGYQPQ--------Q 282
P++ P V+ P + PPGT GP +PP SP Q QPQ
Sbjct: 739 PALQAPTGVTPAPSSAPPGTPQLPTPGPTPSATAVPPQGSPTASQAPNQPQAPTAPVPHT 798
Query: 283 NGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPLPPKRLDPDAIPSPIQ 331
+ PA PQ P P P S P QPL P A PS Q
Sbjct: 799 HIQQAPALHPQR---PPSPHPPPHPSPHPPLQPLTGSAGQPSA-PSHAQ 843
>gi|18105032 type X collagen alpha 1 precursor [Homo sapiens]
Length = 680
Score = 70.5 bits (171), Expect = 8e-12
Identities = 107/407 (26%), Positives = 133/407 (32%), Gaps = 77/407 (18%)
Query: 9 PVPPFGQPQPI----YPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQ------- 57
P P G P P PGY G+ G P P VPG P +
Sbjct: 67 PAGPRGHPGPSGPPGKPGYGSPGLQGEPGLPGPPGPSAVGKPGVPGLPGKPGERGPYGPK 126
Query: 58 ---GMSRAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPL 114
G + P G P P G + G+ GQ GP+ + PG + G+P
Sbjct: 127 GDVGPAGLPGPRGPPGPPGIPGPAGISVPGKPGQ----QGPTGAPGPRGFPGEK--GAPG 180
Query: 115 APVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFP 174
P N YG P + L G Q G P+ P G+G + G
Sbjct: 181 VPGMNGQKGEMGYGAPGRPGERG--LPGPQ--GPTGPSGPP-GVGKRGENGVPGQPGIKG 235
Query: 175 NSGLYGSY-----PQGQAPP------------LSQAQGHPGIQTPQR--SAPSQASSFTP 215
+ G G P Q PP + A G PGI + AP A P
Sbjct: 236 DRGFPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAPGQPGIPGTKGLPGAPGIAGPPGP 295
Query: 216 PASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQ 275
P G P LP + G P GGP P LP +TGP G + P
Sbjct: 296 PGFGKPGLPGLKGERGPAGLPGGPGAKG----EQGPAGLPGKPGLTGPPGNMGPQGPKGI 351
Query: 276 PGYQ--PQQNGSFGPA-----------RGPQSNYGGP-YPAAPTFGSQPGPPQPLPPKRL 321
PG P G GPA RG + G P YP P G P LP +
Sbjct: 352 PGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNP-GLPGPKG 410
Query: 322 D-----PDAIPSPIQVI--------EDDRNNRGTEPFVTGVRGQVPP 355
D P +P P+ + RG P + G RG + P
Sbjct: 411 DPGVGGPPGLPGPVGPAGAKGMPGHNGEAGPRGA-PGIPGTRGPIGP 456
Score = 54.7 bits (130), Expect = 5e-07
Identities = 84/317 (26%), Positives = 109/317 (34%), Gaps = 70/317 (22%)
Query: 28 YGGQSGSTAPAIPYG--AYNGPV----PGYQQTPPQGMSRAPPSSGAPPASTAQAPCGQA 81
+ G+ G P P G GP PG P G P + G P A P G
Sbjct: 239 FPGEMGPIGPPGPQGPPGERGPEGIGKPGAAGAP--GQPGIPGTKGLPGAPGIAGPPGPP 296
Query: 82 AYGQFGQGDV--QNGPSSTVQMQRLPGSQ-PFGSPLAPVGNQPPV-LQPYGPPPTSAQVA 137
+G+ G + + GP+ G Q P G P P PP + P GP
Sbjct: 297 GFGKPGLPGLKGERGPAGLPGGPGAKGEQGPAGLPGKPGLTGPPGNMGPQGPKG------ 350
Query: 138 TQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHP 197
I G+ P G P A G + G G P L +G+P
Sbjct: 351 -------IPGSHGLPGPKGETGPAGPAGYPGAKGERGSPGSDGKPGYPGKPGLDGPKGNP 403
Query: 198 GIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALP-- 255
G+ P+ P GGP P + GP+ P + G P ++ + P+ P
Sbjct: 404 GLPGPKGD----------PGVGGP--PGLPGPVGPAGAKGMPG----HNGEAGPRGAPGI 447
Query: 256 PGTQMTGPLGPLPPMHSPQQPGY-----QPQQNGSFGPA-------RGPQSNYGGP---- 299
PGT+ GP+GP P PG+ P G GPA GP G P
Sbjct: 448 PGTR--GPIGP------PGIPGFPGSKGDPGSPGPPGPAGIATKGLNGPTGPPGPPGPRG 499
Query: 300 ---YPAAPTFGSQPGPP 313
P P PGPP
Sbjct: 500 HSGEPGLPGPPGPPGPP 516
Score = 32.3 bits (72), Expect = 2.5
Identities = 26/77 (33%), Positives = 30/77 (38%), Gaps = 5/77 (6%)
Query: 255 PPGTQMTGPLGPLPPMHSPQQPGY-QPQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPP 313
PPG GP G P P +PGY P G G GP P P +PG
Sbjct: 64 PPGP--AGPRGHPGPSGPPGKPGYGSPGLQGEPG-LPGPPGPSAVGKPGVPGLPGKPGER 120
Query: 314 QPLPPK-RLDPDAIPSP 329
P PK + P +P P
Sbjct: 121 GPYGPKGDVGPAGLPGP 137
>gi|21264565 AT rich interactive domain 1A isoform a [Homo sapiens]
Length = 2285
Score = 70.5 bits (171), Expect = 8e-12
Identities = 104/355 (29%), Positives = 127/355 (35%), Gaps = 67/355 (18%)
Query: 9 PVPPFGQPQPI-YP----GYHQSSYGGQSGSTAPAIPYG-------AYNGPVPGYQQTPP 56
P P+G P YP G QS+ GG S T PYG G P Y Q P
Sbjct: 418 PGQPYGSQTPQRYPMTMQGRAQSAMGGLS-YTQQIPPYGQQGPSGYGQQGQTPYYNQQSP 476
Query: 57 QGMSRAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAP 116
+ PP S PP+ T P Q +Y Q Q SS + P P AP
Sbjct: 477 HPQQQQPPYSQQPPSQT---PHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAP 533
Query: 117 VGNQ-----------PPVLQPYGPPPTSAQVATQLSGMQISGAVA-PAPPS--------S 156
+Q PP QP P Q Q + +S A P P S S
Sbjct: 534 YPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYS 593
Query: 157 GLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPP 216
F PP L+ S +GS AP ++ ++G G + S S+ SS
Sbjct: 594 QQRFPPPQELSQDS--------FGSQASS-APSMTSSKG--GQEDMNLSLQSRPSSLPDL 642
Query: 217 ASGGPRLPSMT-GPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQ 275
+ LP T G L PG S G S SQ S+P Q+ P P SP
Sbjct: 643 SGSIDDLPMGTEGALSPGVSTSGISSSQGEQ-SNPAQS------------PFSPHTSPHL 689
Query: 276 PGYQ-PQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPLPPKRLDPDAIPSP 329
PG + P + PA QS G PAA PG P P D+I P
Sbjct: 690 PGIRGPSPSPVGSPASVAQSRSGPLSPAA-----VPGNQMPPRPPSGQSDSIMHP 739
Score = 68.2 bits (165), Expect = 4e-11
Identities = 96/380 (25%), Positives = 119/380 (31%), Gaps = 74/380 (19%)
Query: 20 YPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRA----PPSSGAPPASTAQ 75
+P + +SY + P P A + P G TP G + A PP S + AS++
Sbjct: 207 FPNHQYNSYYPNRSAYPPPAPAYALSSPRGG---TPGSGAAAAAGSKPPPSSSASASSSS 263
Query: 76 APCGQAAYGQFGQG-------------------DVQNGPSSTVQMQRLPGSQPFGSPL-- 114
+ Q +G G G + PSS Q PG G P
Sbjct: 264 SSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDG 323
Query: 115 -APVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLA-SASGS 172
A G Q +G +A A G Q AP P S G G P + S
Sbjct: 324 GAGKGPADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSP 383
Query: 173 FPNSGLYGSYPQGQAPPLSQAQGHP--------------GIQTPQRSAPSQASSFTPPAS 218
G P G P SQ QG P G QTPQR P A
Sbjct: 384 MDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRY-PMTMQGRAQSAM 442
Query: 219 GG----PRLP--SMTGPLLPGQS---------FGGPSVSQPNHVSSPP------------ 251
GG ++P GP GQ P QP + PP
Sbjct: 443 GGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQ 502
Query: 252 --QALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQ 309
Q+ PP Q + P P P Q P + + PQS P A + Q
Sbjct: 503 QPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQ 562
Query: 310 PGPPQPLPPKRLDPDAIPSP 329
P QP P A P P
Sbjct: 563 QQPQQPAPSTLSQQAAYPQP 582
Score = 57.4 bits (137), Expect = 7e-08
Identities = 101/357 (28%), Positives = 128/357 (35%), Gaps = 68/357 (19%)
Query: 2 NVNQSVPPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNG-PVPGYQQTPPQGMS 60
N N + P P PG GG S A P+ A P P Y P G S
Sbjct: 102 NSNGNAGPRPALNNNLTEPPG----GGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRS 157
Query: 61 RAPPSSGAPPASTAQAPCGQAAYGQFGQG--DVQNGPSSTVQMQRLP--GSQPFGSPLAP 116
PS+ A+ A A Q GQ G +Q+G ++ P S G P
Sbjct: 158 ---PSA---VAAAAAAVFHQQHGGQQSPGLAALQSGGGGGLEPYAGPQQNSHDHGFPNHQ 211
Query: 117 VGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVA-----PAPPSSGLGFGPPTSLA---- 167
+ P Y PP + +++ G SGA A P P SS +S A
Sbjct: 212 YNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSKPPPSSSASASSSSSSFAQQRF 271
Query: 168 SASGSFPNSGLYGSYPQGQAPPL--------SQAQGHPGIQTPQRSAPSQ---------- 209
A G S G PQ A P S A+G+ G S Q
Sbjct: 272 GAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGAGKGPAD 331
Query: 210 ----------ASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQ 259
A++ ASGG + S P+ PG S GG QP ++ PQ P Q
Sbjct: 332 MASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGG---GQP--LARTPQPSSPMDQ 386
Query: 260 MTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPL 316
M G + P P + P Y QQ GP GPQ +G YP P +GSQ P+
Sbjct: 387 M-GKMRPQP--YGGTNP-YSQQQ----GPPSGPQQGHG--YPGQP-YGSQTPQRYPM 432
Score = 45.1 bits (105), Expect = 4e-04
Identities = 77/321 (23%), Positives = 100/321 (31%), Gaps = 64/321 (19%)
Query: 12 PFGQPQPIYPGYHQSSYGGQSG--STAPAIPYGAYNGP-VPGYQQTPPQGMSRAPPSSGA 68
P G + PG S G S P+ + P +PG + G S +P S A
Sbjct: 650 PMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIR-----GPSPSPVGSPA 704
Query: 69 PPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYG 128
A + P AA P + QM P S S + P NQ + Q G
Sbjct: 705 SVAQSRSGPLSPAAV-----------PGN--QMPPRPPSGQSDSIMHPSMNQSSIAQDRG 751
Query: 129 -------------PPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPN 175
P P SA Q SG QI + +S +GP G +P
Sbjct: 752 YMQRNPQMPQYSSPQPGSALSPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQYGPQGGYPR 811
Query: 176 SGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGG-----PRLPSMTGPL 230
Y + P P A G P +GG P +P G L
Sbjct: 812 QPNYNALPNANYPSAGMAGG-----------------INPMGAGGQMHGQPGIPPY-GTL 853
Query: 231 LPGQ---SFGGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNG-SF 286
PG+ + G PN + PPQ G+ M P G + N
Sbjct: 854 PPGRMSHASMGNRPYGPNMANMPPQV---GSGMCPPPGGMNRKTQETAVAMHVAANSIQN 910
Query: 287 GPARGPQSNYGGPYPAAPTFG 307
P P N GG P +G
Sbjct: 911 RPPGYPNMNQGGMMGTGPPYG 931
Score = 39.3 bits (90), Expect = 0.021
Identities = 80/336 (23%), Positives = 106/336 (31%), Gaps = 67/336 (19%)
Query: 37 PAIPYGAYNGPVPGYQQTPPQGMSRA----PPSSGAPPASTAQAPCGQAAYGQFGQGDVQ 92
P P G+ + P Q+ M+ PP+ + P S G + G D
Sbjct: 1132 PPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPPTPASTPHSQIPPLPGMSRSNSVGIQDAF 1191
Query: 93 N-GPSSTVQ----MQRLPGSQPFGSPLAPVGNQP--PVLQPYGPPPTSAQVATQLSGMQI 145
N G ST Q M PG QP + +G P PYG
Sbjct: 1192 NDGSDSTFQKRNSMTPNPGYQPSMNTSDMMGRMSYEPNKDPYG----------------- 1234
Query: 146 SGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRS 205
++ AP S +SG PN G+ Y + P L P P
Sbjct: 1235 --SMRKAPGSDPF---------MSSGQGPNGGMGDPYSRAAGPGLGNVAMGPRQHYPYGG 1283
Query: 206 APSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPP--------- 256
+ T P GP TG P P + PPQ
Sbjct: 1284 PYDRVR--TEPGI-GPEGNMSTGAPQPNLMPSNPDSGMYSPSRYPPQQQQQQQQRHDSYG 1340
Query: 257 ---GTQMTGPLGPLP----PMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQ 309
TQ T P P M+ QQ Y+ +G++GP P + G + P Q
Sbjct: 1341 NQFSTQGTPSGSPFPSQQTTMYQQQQQNYKRPMDGTYGP---PAKRHEGEMYSVPYSTGQ 1397
Query: 310 PGP-PQPLPPKRLDP-----DAIPSPIQVIEDDRNN 339
P Q LPP + P A PSP Q + + N
Sbjct: 1398 GQPQQQQLPPAQPQPASQQQAAQPSPQQDVYNQYGN 1433
Score = 34.7 bits (78), Expect = 0.51
Identities = 88/364 (24%), Positives = 110/364 (30%), Gaps = 79/364 (21%)
Query: 7 VPPVPPFGQPQPI-YPGYHQS-------SYGGQSGSTAPAIPYGAYNGPVPGYQQT---- 54
+P P G P YP Q SYG Q + P G+ P P Q T
Sbjct: 1310 MPSNPDSGMYSPSRYPPQQQQQQQQRHDSYGNQFSTQGT--PSGS---PFPSQQTTMYQQ 1364
Query: 55 PPQGMSRAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPL 114
Q R + PPA + Y GQG Q Q+LP +QP
Sbjct: 1365 QQQNYKRPMDGTYGPPAKRHEGEMYSVPYST-GQGQPQQ--------QQLPPAQP----- 1410
Query: 115 APVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFP 174
QP Q P V Q A A A GP G
Sbjct: 1411 -----QPASQQQAAQPSPQQDVYNQYGNAY--PATATAATERRPAGGPQNQFPFQFGRDR 1463
Query: 175 NSGLYGSYPQGQAPPLSQAQGHP---GIQTPQRSAPSQASS----------FTPPASGGP 221
S G+ Q PP Q G P + Q+ Q + T A GP
Sbjct: 1464 VSAPPGTNAQQNMPP--QMMGGPIQASAEVAQQGTMWQGRNDMTYNYANRQSTGSAPQGP 1521
Query: 222 RLPSM--TGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQ 279
+ T +L S P+H + P GP P+PPM P YQ
Sbjct: 1522 AYHGVNRTDEMLHTDQRANHEGSWPSHGTRQPPY--------GPSAPVPPMTRPPPSNYQ 1573
Query: 280 P--------QQNGSFGPARGPQSNYGGPYPAAPTFGS-----QPGPPQPLPPKRLDPDAI 326
P Q S P P N P +P S + GP P+P + P +
Sbjct: 1574 PPPSMQNHIPQVSSPAPLPRPMENRTSP-SKSPFLHSGMKMQKAGP--PVPASHIAPAPV 1630
Query: 327 PSPI 330
P+
Sbjct: 1631 QPPM 1634
Score = 33.9 bits (76), Expect = 0.86
Identities = 48/179 (26%), Positives = 63/179 (35%), Gaps = 28/179 (15%)
Query: 159 GFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQA--SSFTPP 216
G PP + +A+ S S P+ Q P + + G QTPQ ++ S A PP
Sbjct: 1110 GEDPPPDIFAAADSKK------SQPKIQPPSPAGSGSMQGPQTPQSTSSSMAEGGDLKPP 1163
Query: 217 ASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQP 276
P P LPG S Q MT G P M++
Sbjct: 1164 TPAS--TPHSQIPPLPGMSRSNSVGIQDAFNDGSDSTFQKRNSMTPNPGYQPSMNTSDMM 1221
Query: 277 G---YQPQQN--GSFGPA----------RGPQSNYGGPY--PAAPTFGS-QPGPPQPLP 317
G Y+P ++ GS A +GP G PY A P G+ GP Q P
Sbjct: 1222 GRMSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSRAAGPGLGNVAMGPRQHYP 1280
>gi|21264575 AT rich interactive domain 1A isoform b [Homo sapiens]
Length = 2068
Score = 70.5 bits (171), Expect = 8e-12
Identities = 104/355 (29%), Positives = 127/355 (35%), Gaps = 67/355 (18%)
Query: 9 PVPPFGQPQPI-YP----GYHQSSYGGQSGSTAPAIPYG-------AYNGPVPGYQQTPP 56
P P+G P YP G QS+ GG S T PYG G P Y Q P
Sbjct: 418 PGQPYGSQTPQRYPMTMQGRAQSAMGGLS-YTQQIPPYGQQGPSGYGQQGQTPYYNQQSP 476
Query: 57 QGMSRAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAP 116
+ PP S PP+ T P Q +Y Q Q SS + P P AP
Sbjct: 477 HPQQQQPPYSQQPPSQT---PHAQPSYQQQPQSQPPQLQSSQPPYSQQPSQPPHQQSPAP 533
Query: 117 VGNQ-----------PPVLQPYGPPPTSAQVATQLSGMQISGAVA-PAPPS--------S 156
+Q PP QP P Q Q + +S A P P S S
Sbjct: 534 YPSQQSTTQQHPQSQPPYSQPQAQSPYQQQQPQQPAPSTLSQQAAYPQPQSQQSQQTAYS 593
Query: 157 GLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPP 216
F PP L+ S +GS AP ++ ++G G + S S+ SS
Sbjct: 594 QQRFPPPQELSQDS--------FGSQASS-APSMTSSKG--GQEDMNLSLQSRPSSLPDL 642
Query: 217 ASGGPRLPSMT-GPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQ 275
+ LP T G L PG S G S SQ S+P Q+ P P SP
Sbjct: 643 SGSIDDLPMGTEGALSPGVSTSGISSSQGEQ-SNPAQS------------PFSPHTSPHL 689
Query: 276 PGYQ-PQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPLPPKRLDPDAIPSP 329
PG + P + PA QS G PAA PG P P D+I P
Sbjct: 690 PGIRGPSPSPVGSPASVAQSRSGPLSPAA-----VPGNQMPPRPPSGQSDSIMHP 739
Score = 68.2 bits (165), Expect = 4e-11
Identities = 96/380 (25%), Positives = 119/380 (31%), Gaps = 74/380 (19%)
Query: 20 YPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRA----PPSSGAPPASTAQ 75
+P + +SY + P P A + P G TP G + A PP S + AS++
Sbjct: 207 FPNHQYNSYYPNRSAYPPPAPAYALSSPRGG---TPGSGAAAAAGSKPPPSSSASASSSS 263
Query: 76 APCGQAAYGQFGQG-------------------DVQNGPSSTVQMQRLPGSQPFGSPL-- 114
+ Q +G G G + PSS Q PG G P
Sbjct: 264 SSFAQQRFGAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDG 323
Query: 115 -APVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLA-SASGS 172
A G Q +G +A A G Q AP P S G G P + S
Sbjct: 324 GAGKGPADMASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGGGQPLARTPQPSSP 383
Query: 173 FPNSGLYGSYPQGQAPPLSQAQGHP--------------GIQTPQRSAPSQASSFTPPAS 218
G P G P SQ QG P G QTPQR P A
Sbjct: 384 MDQMGKMRPQPYGGTNPYSQQQGPPSGPQQGHGYPGQPYGSQTPQRY-PMTMQGRAQSAM 442
Query: 219 GG----PRLP--SMTGPLLPGQS---------FGGPSVSQPNHVSSPP------------ 251
GG ++P GP GQ P QP + PP
Sbjct: 443 GGLSYTQQIPPYGQQGPSGYGQQGQTPYYNQQSPHPQQQQPPYSQQPPSQTPHAQPSYQQ 502
Query: 252 --QALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQ 309
Q+ PP Q + P P P Q P + + PQS P A + Q
Sbjct: 503 QPQSQPPQLQSSQPPYSQQPSQPPHQQSPAPYPSQQSTTQQHPQSQPPYSQPQAQSPYQQ 562
Query: 310 PGPPQPLPPKRLDPDAIPSP 329
P QP P A P P
Sbjct: 563 QQPQQPAPSTLSQQAAYPQP 582
Score = 57.4 bits (137), Expect = 7e-08
Identities = 101/357 (28%), Positives = 128/357 (35%), Gaps = 68/357 (19%)
Query: 2 NVNQSVPPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNG-PVPGYQQTPPQGMS 60
N N + P P PG GG S A P+ A P P Y P G S
Sbjct: 102 NSNGNAGPRPALNNNLTEPPG----GGGGGSSDGVGAPPHSAAAALPPPAYGFGQPYGRS 157
Query: 61 RAPPSSGAPPASTAQAPCGQAAYGQFGQG--DVQNGPSSTVQMQRLP--GSQPFGSPLAP 116
PS+ A+ A A Q GQ G +Q+G ++ P S G P
Sbjct: 158 ---PSA---VAAAAAAVFHQQHGGQQSPGLAALQSGGGGGLEPYAGPQQNSHDHGFPNHQ 211
Query: 117 VGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVA-----PAPPSSGLGFGPPTSLA---- 167
+ P Y PP + +++ G SGA A P P SS +S A
Sbjct: 212 YNSYYPNRSAYPPPAPAYALSSPRGGTPGSGAAAAAGSKPPPSSSASASSSSSSFAQQRF 271
Query: 168 SASGSFPNSGLYGSYPQGQAPPL--------SQAQGHPGIQTPQRSAPSQ---------- 209
A G S G PQ A P S A+G+ G S Q
Sbjct: 272 GAMGGGGPSAAGGGTPQPTATPTLNQLLTSPSSARGYQGYPGGDYSGGPQDGGAGKGPAD 331
Query: 210 ----------ASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQ 259
A++ ASGG + S P+ PG S GG QP ++ PQ P Q
Sbjct: 332 MASQCWGAAAAAAAAAAASGGAQQRSHHAPMSPGSSGGG---GQP--LARTPQPSSPMDQ 386
Query: 260 MTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPL 316
M G + P P + P Y QQ GP GPQ +G YP P +GSQ P+
Sbjct: 387 M-GKMRPQP--YGGTNP-YSQQQ----GPPSGPQQGHG--YPGQP-YGSQTPQRYPM 432
Score = 45.1 bits (105), Expect = 4e-04
Identities = 77/321 (23%), Positives = 100/321 (31%), Gaps = 64/321 (19%)
Query: 12 PFGQPQPIYPGYHQSSYGGQSG--STAPAIPYGAYNGP-VPGYQQTPPQGMSRAPPSSGA 68
P G + PG S G S P+ + P +PG + G S +P S A
Sbjct: 650 PMGTEGALSPGVSTSGISSSQGEQSNPAQSPFSPHTSPHLPGIR-----GPSPSPVGSPA 704
Query: 69 PPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYG 128
A + P AA P + QM P S S + P NQ + Q G
Sbjct: 705 SVAQSRSGPLSPAAV-----------PGN--QMPPRPPSGQSDSIMHPSMNQSSIAQDRG 751
Query: 129 -------------PPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPN 175
P P SA Q SG QI + +S +GP G +P
Sbjct: 752 YMQRNPQMPQYSSPQPGSALSPRQPSGGQIHTGMGSYQQNSMGSYGPQGGQYGPQGGYPR 811
Query: 176 SGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGG-----PRLPSMTGPL 230
Y + P P A G P +GG P +P G L
Sbjct: 812 QPNYNALPNANYPSAGMAGG-----------------INPMGAGGQMHGQPGIPPY-GTL 853
Query: 231 LPGQ---SFGGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNG-SF 286
PG+ + G PN + PPQ G+ M P G + N
Sbjct: 854 PPGRMSHASMGNRPYGPNMANMPPQV---GSGMCPPPGGMNRKTQETAVAMHVAANSIQN 910
Query: 287 GPARGPQSNYGGPYPAAPTFG 307
P P N GG P +G
Sbjct: 911 RPPGYPNMNQGGMMGTGPPYG 931
Score = 39.7 bits (91), Expect = 0.016
Identities = 67/288 (23%), Positives = 99/288 (34%), Gaps = 46/288 (15%)
Query: 53 QTPPQGMSRAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGS 112
+ PP + A S + P +P G + G Q+ SS + L P +
Sbjct: 1111 EDPPPDIFAAADSKKSQPKIQPPSPAGSGSMQ--GPQTPQSTSSSMAEGGDLKPPTPAST 1168
Query: 113 PLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGS 172
P + + P + + A S Q ++ P P G+ P + + G
Sbjct: 1169 PHSQIPPLPGMSRSNSVGIQDAFNDGSDSTFQKRNSMTPNP-----GYQPSMNTSDMMGR 1223
Query: 173 F---PNSGLYGSYPQ--GQAPPLSQAQG-HPGIQTPQRSAPSQASSFTPPASGGPRLPSM 226
PN YGS + G P +S QG + G+ P A GP L ++
Sbjct: 1224 MSYEPNKDPYGSMRKAPGSDPFMSSGQGPNGGMGDPYSRA------------AGPGLGNV 1271
Query: 227 TGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLGP------------LPPMHSPQ 274
+GGP + V + P P G TG P P + PQ
Sbjct: 1272 AMGPRQHYPYGGPY----DRVRTEPGIGPEGNMSTGAPQPNLMPSNPDSGMYSPSRYPPQ 1327
Query: 275 QPGYQPQQNGSFGPARGPQSN-YGGPYPAAPTF----GSQPGPPQPLP 317
Q Q Q++ S+G Q G P+P+ T Q P PLP
Sbjct: 1328 QQQQQQQRHDSYGNQFSTQGTPSGSPFPSQQTTMYQQQQQVSSPAPLP 1375
>gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 69.3 bits (168), Expect = 2e-11
Identities = 90/334 (26%), Positives = 117/334 (35%), Gaps = 66/334 (19%)
Query: 2 NVNQSVPPVPPFGQPQPIY-----PGYHQSSYGGQSGSTAP----------AIPYGAYNG 46
++N + PP PP P Y P + +Y GS + A+P
Sbjct: 1538 SLNSTAPPPPPPPPPSSSYYQNQQPSANFQNYNQLKGSLSQQTVFTSGPNQALPGTTSQQ 1597
Query: 47 PVPGYQQTPPQGMSR-------------APPSSGAPPASTAQAPCGQAAYGQFGQGDVQN 93
VPG+ TP + PP PPA ++ Q V
Sbjct: 1598 TVPGHHVTPGHFLPSQNPTIHHQTAAAVVPPPPPPPPAPGPHLVQQPNSHQQHSVAHVV- 1656
Query: 94 GPSSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQ------ISG 147
GP V SQ G L P P + PPP +T L G+Q ++
Sbjct: 1657 GPVHAVTPGSHIHSQTAGHHLPPPPPPPGPAPHHHPPP---HPSTGLQGLQAQHQHVVNS 1713
Query: 148 AVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAP 207
A P PP PP S ASG S +P Q PPL + HP + P
Sbjct: 1714 APPPPPP-------PPPSSVLASGHHTTSAQALHHPPHQGPPLFPSSAHPTVP----PYP 1762
Query: 208 SQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQ--PNHVSSPPQ----------ALP 255
SQA+ T G PS TGP P GP + PN + +P ALP
Sbjct: 1763 SQATHHTTLGPGPQHQPSGTGPHCP-LPVTGPHLQPQGPNSIPTPTASGFCPHPGSVALP 1821
Query: 256 PGTQMTGPLGPLP---PMHSPQ-QPGYQPQQNGS 285
G Q P+P P+H Q P +Q +GS
Sbjct: 1822 HGVQGPQQASPVPGQIPIHRAQVPPTFQNNYHGS 1855
Score = 42.4 bits (98), Expect = 0.002
Identities = 75/308 (24%), Positives = 99/308 (32%), Gaps = 73/308 (23%)
Query: 105 PGSQPFGSPLAPVGNQ-PPVLQPYGPP-----------PTSAQVAT-------------- 138
P SQ GSP P +Q P V P P P + Q AT
Sbjct: 1469 PPSQQLGSPYRPHHSQSPQVGTPQREPQRNFYPAAQNLPANTQQATSGTLFTQTPSGQSS 1528
Query: 139 ----QLSGMQISGAVAPAPPSSGLGFGPPTS--------------LASASGSFPNSGLYG 180
Q + ++ P PP PP+S GS ++
Sbjct: 1529 ATYSQFNQQSLNSTAPPPPPPP-----PPSSSYYQNQQPSANFQNYNQLKGSLSQQTVFT 1583
Query: 181 SYPQGQAPPLSQAQGHPGIQ-TPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGP 239
S P P + Q PG TP PSQ + + P P PG
Sbjct: 1584 SGPNQALPGTTSQQTVPGHHVTPGHFLPSQNPTIHHQTAAAVVPPPPPPPPAPGPHL--- 1640
Query: 240 SVSQPN--------HVSSPPQALPPG----TQMTGPLGPLPPMHSPQQPGYQPQQNGSFG 287
V QPN HV P A+ PG +Q G P PP P + P + S G
Sbjct: 1641 -VQQPNSHQQHSVAHVVGPVHAVTPGSHIHSQTAGHHLPPPPPPPGPAPHHHPPPHPSTG 1699
Query: 288 PARGPQSNYGGPYPAAPTFGSQPGPPQPLPPKRLDPDAIPSPIQVIEDDRNNRGTEPFVT 347
+G Q+ + +AP P PP P P L + Q + ++G F +
Sbjct: 1700 -LQGLQAQHQHVVNSAP-----PPPPPPPPSSVLASGHHTTSAQALHHP-PHQGPPLFPS 1752
Query: 348 GVRGQVPP 355
VPP
Sbjct: 1753 SAHPTVPP 1760
Score = 32.3 bits (72), Expect = 2.5
Identities = 54/232 (23%), Positives = 80/232 (34%), Gaps = 57/232 (24%)
Query: 119 NQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGL 178
N P LQ GP P+ +++ M+ P P ++ P TS +
Sbjct: 1304 NHIPQLQAKGPVPSFSEL------MEDPDPENPEPTTTNECPSPDTSQNTC--------- 1348
Query: 179 YGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGG 238
++PP G PG P A + FT P P + ++ G
Sbjct: 1349 -------KSPPKMSKPGSPGSVIP---AQAHGKIFTKPD------PQWDSTVSASEAENG 1392
Query: 239 PSVS---QPNHVSSPPQAL----PPGT-------QMTGPLGPLPP-MHSPQQPGYQ---- 279
+ Q +S+ QAL PP T Q++ L +P +H P P +
Sbjct: 1393 VHLKTELQQKQLSNNNQALSKNHPPQTHVRNSSEQLSQKLPSVPTKLHCPPSPHLENPPK 1452
Query: 280 ------PQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPLPPKRLDPDA 325
P Q+G P + P G PY + Q G PQ P + P A
Sbjct: 1453 SSTPHTPVQHGYLSP-KPPSQQLGSPYRPHHSQSPQVGTPQREPQRNFYPAA 1503
>gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 69.3 bits (168), Expect = 2e-11
Identities = 90/334 (26%), Positives = 117/334 (35%), Gaps = 66/334 (19%)
Query: 2 NVNQSVPPVPPFGQPQPIY-----PGYHQSSYGGQSGSTAP----------AIPYGAYNG 46
++N + PP PP P Y P + +Y GS + A+P
Sbjct: 1538 SLNSTAPPPPPPPPPSSSYYQNQQPSANFQNYNQLKGSLSQQTVFTSGPNQALPGTTSQQ 1597
Query: 47 PVPGYQQTPPQGMSR-------------APPSSGAPPASTAQAPCGQAAYGQFGQGDVQN 93
VPG+ TP + PP PPA ++ Q V
Sbjct: 1598 TVPGHHVTPGHFLPSQNPTIHHQTAAAVVPPPPPPPPAPGPHLVQQPNSHQQHSVAHVV- 1656
Query: 94 GPSSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQ------ISG 147
GP V SQ G L P P + PPP +T L G+Q ++
Sbjct: 1657 GPVHAVTPGSHIHSQTAGHHLPPPPPPPGPAPHHHPPP---HPSTGLQGLQAQHQHVVNS 1713
Query: 148 AVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAP 207
A P PP PP S ASG S +P Q PPL + HP + P
Sbjct: 1714 APPPPPP-------PPPSSVLASGHHTTSAQALHHPPHQGPPLFPSSAHPTVP----PYP 1762
Query: 208 SQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQ--PNHVSSPPQ----------ALP 255
SQA+ T G PS TGP P GP + PN + +P ALP
Sbjct: 1763 SQATHHTTLGPGPQHQPSGTGPHCP-LPVTGPHLQPQGPNSIPTPTASGFCPHPGSVALP 1821
Query: 256 PGTQMTGPLGPLP---PMHSPQ-QPGYQPQQNGS 285
G Q P+P P+H Q P +Q +GS
Sbjct: 1822 HGVQGPQQASPVPGQIPIHRAQVPPTFQNNYHGS 1855
Score = 42.4 bits (98), Expect = 0.002
Identities = 75/308 (24%), Positives = 99/308 (32%), Gaps = 73/308 (23%)
Query: 105 PGSQPFGSPLAPVGNQ-PPVLQPYGPP-----------PTSAQVAT-------------- 138
P SQ GSP P +Q P V P P P + Q AT
Sbjct: 1469 PPSQQLGSPYRPHHSQSPQVGTPQREPQRNFYPAAQNLPANTQQATSGTLFTQTPSGQSS 1528
Query: 139 ----QLSGMQISGAVAPAPPSSGLGFGPPTS--------------LASASGSFPNSGLYG 180
Q + ++ P PP PP+S GS ++
Sbjct: 1529 ATYSQFNQQSLNSTAPPPPPPP-----PPSSSYYQNQQPSANFQNYNQLKGSLSQQTVFT 1583
Query: 181 SYPQGQAPPLSQAQGHPGIQ-TPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGP 239
S P P + Q PG TP PSQ + + P P PG
Sbjct: 1584 SGPNQALPGTTSQQTVPGHHVTPGHFLPSQNPTIHHQTAAAVVPPPPPPPPAPGPHL--- 1640
Query: 240 SVSQPN--------HVSSPPQALPPG----TQMTGPLGPLPPMHSPQQPGYQPQQNGSFG 287
V QPN HV P A+ PG +Q G P PP P + P + S G
Sbjct: 1641 -VQQPNSHQQHSVAHVVGPVHAVTPGSHIHSQTAGHHLPPPPPPPGPAPHHHPPPHPSTG 1699
Query: 288 PARGPQSNYGGPYPAAPTFGSQPGPPQPLPPKRLDPDAIPSPIQVIEDDRNNRGTEPFVT 347
+G Q+ + +AP P PP P P L + Q + ++G F +
Sbjct: 1700 -LQGLQAQHQHVVNSAP-----PPPPPPPPSSVLASGHHTTSAQALHHP-PHQGPPLFPS 1752
Query: 348 GVRGQVPP 355
VPP
Sbjct: 1753 SAHPTVPP 1760
Score = 32.3 bits (72), Expect = 2.5
Identities = 54/232 (23%), Positives = 80/232 (34%), Gaps = 57/232 (24%)
Query: 119 NQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGL 178
N P LQ GP P+ +++ M+ P P ++ P TS +
Sbjct: 1304 NHIPQLQAKGPVPSFSEL------MEDPDPENPEPTTTNECPSPDTSQNTC--------- 1348
Query: 179 YGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGG 238
++PP G PG P A + FT P P + ++ G
Sbjct: 1349 -------KSPPKMSKPGSPGSVIP---AQAHGKIFTKPD------PQWDSTVSASEAENG 1392
Query: 239 PSVS---QPNHVSSPPQAL----PPGT-------QMTGPLGPLPP-MHSPQQPGYQ---- 279
+ Q +S+ QAL PP T Q++ L +P +H P P +
Sbjct: 1393 VHLKTELQQKQLSNNNQALSKNHPPQTHVRNSSEQLSQKLPSVPTKLHCPPSPHLENPPK 1452
Query: 280 ------PQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPLPPKRLDPDA 325
P Q+G P + P G PY + Q G PQ P + P A
Sbjct: 1453 SSTPHTPVQHGYLSP-KPPSQQLGSPYRPHHSQSPQVGTPQREPQRNFYPAA 1503
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 68.9 bits (167), Expect = 2e-11
Identities = 96/367 (26%), Positives = 119/367 (32%), Gaps = 71/367 (19%)
Query: 8 PPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPS-- 65
PP Q P P H Y G +G P G G P G PP+
Sbjct: 200 PPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTP 259
Query: 66 --------SGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAP- 116
SGAPP P G N P T + P +P + A
Sbjct: 260 ISVSSSGASGAPPTKPPTTPVGGGNLPS--APPPANFPHVTPNLPPPPALRPLNNASASP 317
Query: 117 --VGNQP-----PVLQPYGP--------PPTSAQVATQLSGMQISGAVAPAPP------- 154
+G QP P G P +A + + + APAPP
Sbjct: 318 PGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSS 377
Query: 155 ---SSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQA- 210
SS +S +S++ FP S SYP PP S + + + Q S PSQA
Sbjct: 378 SSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAV 437
Query: 211 -SSFTPPASGGPRL-------PSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMT- 261
S PP RL P P QS P VS +H Q Q
Sbjct: 438 WSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQ 497
Query: 262 -------GPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGS-QPGPP 313
G GP PP P P G S++ PY +P+ GS +P PP
Sbjct: 498 QQQQQHHGNSGPPPPGAFPH-------------PLEGGSSHHAHPYAMSPSLGSLRPYPP 544
Query: 314 QP--LPP 318
P LPP
Sbjct: 545 GPAHLPP 551
Score = 57.0 bits (136), Expect = 1e-07
Identities = 99/375 (26%), Positives = 127/375 (33%), Gaps = 77/375 (20%)
Query: 6 SVPPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPS 65
S+PP P+ Y SS + S++ + + + P P Q P S PP+
Sbjct: 358 SLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSAS-PFPASQALPSYPHSFPPPT 416
Query: 66 S----GAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQP 121
S PP T + QA + Q GP P P+G LA P
Sbjct: 417 SLSVSNQPPKYTQPSLPSQAVWSQ--------GP---------PPPPPYGRLLANSNAHP 459
Query: 122 PVLQPY------GPPPTSA--------------QVATQLSGMQISGAVAPAPPSSGLGFG 161
P PP S Q Q Q G P PP + F
Sbjct: 460 GPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGA---FP 516
Query: 162 PPTSLASASGSFPNS-----GLYGSYPQGQA---PPLSQAQ-GHPGIQTPQRSAPSQASS 212
P S+ + P + G YP G A PP SQ G P S+ S +SS
Sbjct: 517 HPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSS 576
Query: 213 FT---------PPASGGPRLPSMTGPLLPGQSFGGPSVSQ--PNHVSSPP---QALPPGT 258
T P S GP+ P +P + ++S SSP A PPG
Sbjct: 577 STSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGP 636
Query: 259 QMTGPLGPLPPMH-SPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQ--- 314
G P P + + PGY+P SF G Y G P A +PG P
Sbjct: 637 PPYGKRAPSPGAYKTATPPGYKPGSPPSF--RTGTPPGYRGTSPPAGPGTFKPGSPTVGP 694
Query: 315 -PLPPKRLDPDAIPS 328
PLPP P +PS
Sbjct: 695 GPLPP--AGPSGLPS 707
Score = 56.6 bits (135), Expect = 1e-07
Identities = 78/351 (22%), Positives = 117/351 (33%), Gaps = 83/351 (23%)
Query: 86 FGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPP----------------------- 122
+ G V+N S+ + + P PL P QPP
Sbjct: 136 YSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYH 195
Query: 123 ----------VLQPYGPPPTSAQVATQLSGMQISG----------AVAPAPPSSGLGFGP 162
P G PP Q+ +G +SG A + P+ G P
Sbjct: 196 APMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPP 255
Query: 163 PTSLASASGSF---------PNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSF 213
PT+ S S S P + + G PP + P + P P +S
Sbjct: 256 PTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASA 315
Query: 214 TPPASGGPRLPS-MTGPLLPGQSFGG--PSVSQPNHVSSPPQALPPGTQMTGPLGPLPPM 270
+PP G LP + P GQ GG P + ++ P +LPP + P PPM
Sbjct: 316 SPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSS----APAPPM 371
Query: 271 HSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQP---GPPQPL-----PPKRLD 322
P + + + S+ P+PA+ S P PP L PPK
Sbjct: 372 RFPYSS--SSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQ 429
Query: 323 PDAIPSPI-------------QVIEDDRNNRGTEPFVTGVRGQVPPLVTTN 360
P ++PS +++ + + G P TG + P V+T+
Sbjct: 430 P-SLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTH 479
Score = 56.6 bits (135), Expect = 1e-07
Identities = 75/284 (26%), Positives = 91/284 (32%), Gaps = 65/284 (22%)
Query: 25 QSSYGGQSGSTAPAIPYGAYNGPVPG--------YQQTPPQGMSRAPPSSGA--PPASTA 74
Q + G SG P GA+ P+ G Y +P G R P A PP
Sbjct: 500 QQQHHGNSGPPPP----GAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPP---- 551
Query: 75 QAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPPPTSA 134
P Q +Y Q G SS GS P P G Q P+ P PT
Sbjct: 552 --PHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPY-PFPPVPTVT 608
Query: 135 QVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQ 194
+ LS + + A +PA + GPP P G+ P +
Sbjct: 609 TSSATLSTVIATVASSPAGYKTASPPGPP-------------------PYGKRAP---SP 646
Query: 195 GHPGIQTPQRSAPSQASSF---TPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSS-- 249
G TP P SF TPP G P+ G PG GP P S
Sbjct: 647 GAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLP 706
Query: 250 ---PPQALP--------------PGTQMTGPLGPLPPMHSPQQP 276
PP A P P + P P+PP SP P
Sbjct: 707 SLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPP 750
Score = 42.7 bits (99), Expect = 0.002
Identities = 61/235 (25%), Positives = 82/235 (34%), Gaps = 33/235 (14%)
Query: 6 SVPPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYN------GPVPGYQQTPPQGM 59
S+ P PP P + P + Q SY Q+G P + + + G P +P QG
Sbjct: 538 SLRPYPP--GPAHLPPPHSQVSYS-QAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGP 594
Query: 60 SRAP-PSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFG----SPL 114
AP P P +T+ A V + P+ + PG P+G SP
Sbjct: 595 QGAPYPFPPVPTVTTSSATLSTVI------ATVASSPAG-YKTASPPGPPPYGKRAPSPG 647
Query: 115 APVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFP 174
A PP +P PP G P +G G P S G P
Sbjct: 648 AYKTATPPGYKPGSPPSFRTGTPPGYRG---------TSPPAGPGTFKPGSPTVGPGPLP 698
Query: 175 NSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGP 229
+G G P PP + A G P T + P A + P S P S + P
Sbjct: 699 PAGPSG-LPSLPPPPAAPASGPPLSATQIKQEP--AEEYETPESPVPPARSPSPP 750
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 68.9 bits (167), Expect = 2e-11
Identities = 96/367 (26%), Positives = 119/367 (32%), Gaps = 71/367 (19%)
Query: 8 PPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPS-- 65
PP Q P P H Y G +G P G G P G PP+
Sbjct: 200 PPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPPPTTP 259
Query: 66 --------SGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAP- 116
SGAPP P G N P T + P +P + A
Sbjct: 260 ISVSSSGASGAPPTKPPTTPVGGGNLPS--APPPANFPHVTPNLPPPPALRPLNNASASP 317
Query: 117 --VGNQP-----PVLQPYGP--------PPTSAQVATQLSGMQISGAVAPAPP------- 154
+G QP P G P +A + + + APAPP
Sbjct: 318 PGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSSAPAPPMRFPYSS 377
Query: 155 ---SSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQA- 210
SS +S +S++ FP S SYP PP S + + + Q S PSQA
Sbjct: 378 SSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQPSLPSQAV 437
Query: 211 -SSFTPPASGGPRL-------PSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMT- 261
S PP RL P P QS P VS +H Q Q
Sbjct: 438 WSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQ 497
Query: 262 -------GPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGS-QPGPP 313
G GP PP P P G S++ PY +P+ GS +P PP
Sbjct: 498 QQQQQHHGNSGPPPPGAFPH-------------PLEGGSSHHAHPYAMSPSLGSLRPYPP 544
Query: 314 QP--LPP 318
P LPP
Sbjct: 545 GPAHLPP 551
Score = 57.0 bits (136), Expect = 1e-07
Identities = 99/375 (26%), Positives = 127/375 (33%), Gaps = 77/375 (20%)
Query: 6 SVPPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPS 65
S+PP P+ Y SS + S++ + + + P P Q P S PP+
Sbjct: 358 SLPPASSSAPAPPMRFPYSSSSSSSAAASSSSSSSSSSAS-PFPASQALPSYPHSFPPPT 416
Query: 66 S----GAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQP 121
S PP T + QA + Q GP P P+G LA P
Sbjct: 417 SLSVSNQPPKYTQPSLPSQAVWSQ--------GP---------PPPPPYGRLLANSNAHP 459
Query: 122 PVLQPY------GPPPTSA--------------QVATQLSGMQISGAVAPAPPSSGLGFG 161
P PP S Q Q Q G P PP + F
Sbjct: 460 GPFPPSTGAQSTAHPPVSTHHHHHQQQQQQQQQQQQQQQQQQQHHGNSGPPPPGA---FP 516
Query: 162 PPTSLASASGSFPNS-----GLYGSYPQGQA---PPLSQAQ-GHPGIQTPQRSAPSQASS 212
P S+ + P + G YP G A PP SQ G P S+ S +SS
Sbjct: 517 HPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPPPHSQVSYSQAGPNGPPVSSSSNSSS 576
Query: 213 FT---------PPASGGPRLPSMTGPLLPGQSFGGPSVSQ--PNHVSSPP---QALPPGT 258
T P S GP+ P +P + ++S SSP A PPG
Sbjct: 577 STSQGSYPCSHPSPSQGPQGAPYPFPPVPTVTTSSATLSTVIATVASSPAGYKTASPPGP 636
Query: 259 QMTGPLGPLPPMH-SPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQ--- 314
G P P + + PGY+P SF G Y G P A +PG P
Sbjct: 637 PPYGKRAPSPGAYKTATPPGYKPGSPPSF--RTGTPPGYRGTSPPAGPGTFKPGSPTVGP 694
Query: 315 -PLPPKRLDPDAIPS 328
PLPP P +PS
Sbjct: 695 GPLPP--AGPSGLPS 707
Score = 56.6 bits (135), Expect = 1e-07
Identities = 78/351 (22%), Positives = 117/351 (33%), Gaps = 83/351 (23%)
Query: 86 FGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPP----------------------- 122
+ G V+N S+ + + P PL P QPP
Sbjct: 136 YSPGSVENDSDSSSGLSQGPARPYHPPPLFPPSPQPPDSTPRQPEASFEPHPSVTPTGYH 195
Query: 123 ----------VLQPYGPPPTSAQVATQLSGMQISG----------AVAPAPPSSGLGFGP 162
P G PP Q+ +G +SG A + P+ G P
Sbjct: 196 APMEPPTSRMFQAPPGAPPPHPQLYPGGTGGVLSGPPMGPKGGGAASSVGGPNGGKQHPP 255
Query: 163 PTSLASASGSF---------PNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSF 213
PT+ S S S P + + G PP + P + P P +S
Sbjct: 256 PTTPISVSSSGASGAPPTKPPTTPVGGGNLPSAPPPANFPHVTPNLPPPPALRPLNNASA 315
Query: 214 TPPASGGPRLPS-MTGPLLPGQSFGG--PSVSQPNHVSSPPQALPPGTQMTGPLGPLPPM 270
+PP G LP + P GQ GG P + ++ P +LPP + P PPM
Sbjct: 316 SPPGLGAQPLPGHLPSPHAMGQGMGGLPPGPEKGPTLAPSPHSLPPASSS----APAPPM 371
Query: 271 HSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQP---GPPQPL-----PPKRLD 322
P + + + S+ P+PA+ S P PP L PPK
Sbjct: 372 RFPYSS--SSSSSAAASSSSSSSSSSASPFPASQALPSYPHSFPPPTSLSVSNQPPKYTQ 429
Query: 323 PDAIPSPI-------------QVIEDDRNNRGTEPFVTGVRGQVPPLVTTN 360
P ++PS +++ + + G P TG + P V+T+
Sbjct: 430 P-SLPSQAVWSQGPPPPPPYGRLLANSNAHPGPFPPSTGAQSTAHPPVSTH 479
Score = 56.6 bits (135), Expect = 1e-07
Identities = 75/284 (26%), Positives = 91/284 (32%), Gaps = 65/284 (22%)
Query: 25 QSSYGGQSGSTAPAIPYGAYNGPVPG--------YQQTPPQGMSRAPPSSGA--PPASTA 74
Q + G SG P GA+ P+ G Y +P G R P A PP
Sbjct: 500 QQQHHGNSGPPPP----GAFPHPLEGGSSHHAHPYAMSPSLGSLRPYPPGPAHLPP---- 551
Query: 75 QAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPPPTSA 134
P Q +Y Q G SS GS P P G Q P+ P PT
Sbjct: 552 --PHSQVSYSQAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGPQGAPY-PFPPVPTVT 608
Query: 135 QVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQ 194
+ LS + + A +PA + GPP P G+ P +
Sbjct: 609 TSSATLSTVIATVASSPAGYKTASPPGPP-------------------PYGKRAP---SP 646
Query: 195 GHPGIQTPQRSAPSQASSF---TPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSS-- 249
G TP P SF TPP G P+ G PG GP P S
Sbjct: 647 GAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAGPSGLP 706
Query: 250 ---PPQALP--------------PGTQMTGPLGPLPPMHSPQQP 276
PP A P P + P P+PP SP P
Sbjct: 707 SLPPPPAAPASGPPLSATQIKQEPAEEYETPESPVPPARSPSPP 750
Score = 42.7 bits (99), Expect = 0.002
Identities = 61/235 (25%), Positives = 82/235 (34%), Gaps = 33/235 (14%)
Query: 6 SVPPVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYN------GPVPGYQQTPPQGM 59
S+ P PP P + P + Q SY Q+G P + + + G P +P QG
Sbjct: 538 SLRPYPP--GPAHLPPPHSQVSYS-QAGPNGPPVSSSSNSSSSTSQGSYPCSHPSPSQGP 594
Query: 60 SRAP-PSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFG----SPL 114
AP P P +T+ A V + P+ + PG P+G SP
Sbjct: 595 QGAPYPFPPVPTVTTSSATLSTVI------ATVASSPAG-YKTASPPGPPPYGKRAPSPG 647
Query: 115 APVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFP 174
A PP +P PP G P +G G P S G P
Sbjct: 648 AYKTATPPGYKPGSPPSFRTGTPPGYRG---------TSPPAGPGTFKPGSPTVGPGPLP 698
Query: 175 NSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGP 229
+G G P PP + A G P T + P A + P S P S + P
Sbjct: 699 PAGPSG-LPSLPPPPAAPASGPPLSATQIKQEP--AEEYETPESPVPPARSPSPP 750
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 68.6 bits (166), Expect = 3e-11
Identities = 81/305 (26%), Positives = 107/305 (35%), Gaps = 58/305 (19%)
Query: 64 PSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSS--------TVQMQRLPGSQPFGSPLA 115
PS PP Q G+ Q G Q GP+ T + + PG+ P+
Sbjct: 299 PSPSKPPIQ--QPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVK--PPVQ 354
Query: 116 PVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPN 175
P G P QP GP A+ Q +G + + P P + P + P
Sbjct: 355 PPGTTKPPAQPLGP----AKPPAQQTGSEKPSSEQPGPKA----LAQPPGVGKTPAQQPG 406
Query: 176 SGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASG---------GPRLPSM 226
+ G PL+Q PG+Q+P ++ + P G G
Sbjct: 407 PAKPPTQQVGTPKPLAQ---QPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQ 463
Query: 227 TGPLLPGQSFGGPSV---SQPNHVSSPPQ--------ALPPGTQMTGPLGPLPPMHSPQQ 275
TGP P GP+ QP PPQ + PG+ P P P SPQQ
Sbjct: 464 TGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQ 523
Query: 276 PGYQP---QQNGSFGPARGPQSNYGGPYPAAPTFG------SQPGPPQPLPPKRLDPDAI 326
PG QQ GS P+ P PA P+ SQ G +PL P + P A
Sbjct: 524 PGSTKPPSQQPGSAKPSAQQ------PSPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSAK 577
Query: 327 PSPIQ 331
P Q
Sbjct: 578 QPPSQ 582
Score = 61.6 bits (148), Expect = 4e-09
Identities = 82/304 (26%), Positives = 105/304 (34%), Gaps = 43/304 (14%)
Query: 56 PQGMSRAPPSSGAPPASTAQAPCGQ---------AAYGQFGQGDVQNG---------PSS 97
P+ + PP +G P Q P A+ Q Q D+ G PS
Sbjct: 244 PEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSK 303
Query: 98 TVQMQRLPGSQPFGSP---LAPVGNQPPVLQPYG-PPPTSAQVATQLSGMQISGAVAPAP 153
Q PG P P + G P QP G P + Q T +Q G P
Sbjct: 304 PPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKP-- 361
Query: 154 PSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSF 213
P+ LG P + + S P+S G Q P + + P Q P+Q
Sbjct: 362 PAQPLGPAKPPAQQTGSEK-PSSEQPGPKALAQPPGVGKT---PAQQPGPAKPPTQQVGT 417
Query: 214 TPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPG---TQMTGPLGPLPPM 270
P + P L S P ++ V QP P Q PG Q TGP P +
Sbjct: 418 PKPLAQQPGLQSPAKAPGPTKT----PVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQL 473
Query: 271 HSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQ---PLPPKRLDPDAIP 327
P +P PQQ G PA+ P G P + GS PPQ P P P +
Sbjct: 474 PGPAKP--PPQQPG---PAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTK 528
Query: 328 SPIQ 331
P Q
Sbjct: 529 PPSQ 532
Score = 58.2 bits (139), Expect = 4e-08
Identities = 78/296 (26%), Positives = 104/296 (35%), Gaps = 37/296 (12%)
Query: 8 PPVPPFGQPQPIYPGYHQSSYG-GQSGSTAPAIPYGAYNGPV---PGYQQTPPQGMSRAP 63
P PP QP P P Q + Q G P P+ PG + P Q P
Sbjct: 301 PSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQ-----P 355
Query: 64 PSSGAPPAST---AQAPCGQAAYGQFGQGDVQNGPSSTVQ---MQRLPGSQPFGSPLAPV 117
P + PPA A+ P Q G Q GP + Q + + P QP +
Sbjct: 356 PGTTKPPAQPLGPAKPPAQQT--GSEKPSSEQPGPKALAQPPGVGKTPAQQPGPA----- 408
Query: 118 GNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSG 177
+PP Q P P + Q Q S A AP P + + P + + G
Sbjct: 409 --KPPTQQVGTPKPLAQQPGLQ------SPAKAPGPTKTPVQQPGPGKIPAQQAG---PG 457
Query: 178 LYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGP-RLPSMTGPLLPGQSF 236
+ G P SQ G P PQ+ P++ P ++ P + P T P
Sbjct: 458 KTSAQQTGPTKPPSQLPG-PAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGP 516
Query: 237 GGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGP 292
PS QP S+ P + PG+ P P S QQ Q GS P + P
Sbjct: 517 AKPSPQQPG--STKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPP 570
Score = 47.0 bits (110), Expect = 1e-04
Identities = 64/232 (27%), Positives = 79/232 (34%), Gaps = 23/232 (9%)
Query: 8 PPVPPFGQPQPIYPGYHQSSY---GGQSGSTAPAIPYGAYNGPV--PGYQQTPPQGMSRA 62
PP P G +P P S Q G A A P G P PG + P Q +
Sbjct: 361 PPAQPLGPAKP--PAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTP 418
Query: 63 PPSSGAPPA-STAQAPCG-QAAYGQFGQGDV---QNGPSSTVQMQRLPGSQPFG------ 111
P + P S A+AP + Q G G + Q GP T Q P P
Sbjct: 419 KPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAK 478
Query: 112 -SPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASAS 170
P P +PP QP P S Q + Q G P+P G P SA
Sbjct: 479 PPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAK 538
Query: 171 GSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPR 222
S Q P+SQ +Q P S S+ PP+ G P+
Sbjct: 539 PSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVS----PSAKQPPSQGLPK 586
Score = 38.9 bits (89), Expect = 0.027
Identities = 65/256 (25%), Positives = 89/256 (34%), Gaps = 53/256 (20%)
Query: 15 QPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSGAPPASTA 74
QP+ + P S S +T P IP + TPP A PS PP
Sbjct: 756 QPKMVKPTTDLVS--SSSATTKPDIPSSKVQSQAEE-KTTPPLKTDSAKPSQSFPPTGEK 812
Query: 75 QAPCGQAAYGQFGQGDV---QNGPSST--------------------VQMQRLPGSQPF- 110
+P A + GPSS +M P ++P
Sbjct: 813 VSPFDSKAIPRPASDSKIISHPGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMP 872
Query: 111 -GSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQIS-GAVAPAPPS---------SGLG 159
GSP P G +P Q P S + Q ++ G++ AP S +G
Sbjct: 873 KGSPTPP-GPRPTAGQTVPTPQQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKL 931
Query: 160 FGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASG 219
FG S+ S + + ++ GQ P SQ+ PG Q APSQ PP S
Sbjct: 932 FGFGASIFSQASNLISTA-------GQPGPHSQSG--PGAPMKQAPAPSQ-----PPTSQ 977
Query: 220 GPRLPSMTGPLLPGQS 235
GP + P P +S
Sbjct: 978 GPPKSTGQAPPAPAKS 993
Score = 32.0 bits (71), Expect = 3.3
Identities = 40/179 (22%), Positives = 61/179 (34%), Gaps = 31/179 (17%)
Query: 96 SSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPP- 154
SS++ + P P P P PP P PP + + ++ V A P
Sbjct: 2396 SSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPL 2455
Query: 155 --------------SSGLGF-----GPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQG 195
S+GL P + S P+ ++ P+ PP++
Sbjct: 2456 FDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSIPSGLVFTHRPEPSKPPIAPKPV 2515
Query: 196 HPGIQT---------PQRSAPSQASSFT--PPASGGPRLPSMTGPLLPGQSFGGPSVSQ 243
P + T P+ + S SS T S +LPS T PL P + P S+
Sbjct: 2516 IPQLPTTTQKPTDIHPKPTGLSLTSSMTLNLVTSADYKLPSPTSPLSPHSNKSSPRFSK 2574
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 68.6 bits (166), Expect = 3e-11
Identities = 81/305 (26%), Positives = 107/305 (35%), Gaps = 58/305 (19%)
Query: 64 PSSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSS--------TVQMQRLPGSQPFGSPLA 115
PS PP Q G+ Q G Q GP+ T + + PG+ P+
Sbjct: 299 PSPSKPPIQ--QPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVK--PPVQ 354
Query: 116 PVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPN 175
P G P QP GP A+ Q +G + + P P + P + P
Sbjct: 355 PPGTTKPPAQPLGP----AKPPAQQTGSEKPSSEQPGPKA----LAQPPGVGKTPAQQPG 406
Query: 176 SGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASG---------GPRLPSM 226
+ G PL+Q PG+Q+P ++ + P G G
Sbjct: 407 PAKPPTQQVGTPKPLAQ---QPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQ 463
Query: 227 TGPLLPGQSFGGPSV---SQPNHVSSPPQ--------ALPPGTQMTGPLGPLPPMHSPQQ 275
TGP P GP+ QP PPQ + PG+ P P P SPQQ
Sbjct: 464 TGPTKPPSQLPGPAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQ 523
Query: 276 PGYQP---QQNGSFGPARGPQSNYGGPYPAAPTFG------SQPGPPQPLPPKRLDPDAI 326
PG QQ GS P+ P PA P+ SQ G +PL P + P A
Sbjct: 524 PGSTKPPSQQPGSAKPSAQQ------PSPAKPSAQQSTKPVSQTGSGKPLQPPTVSPSAK 577
Query: 327 PSPIQ 331
P Q
Sbjct: 578 QPPSQ 582
Score = 61.6 bits (148), Expect = 4e-09
Identities = 82/304 (26%), Positives = 105/304 (34%), Gaps = 43/304 (14%)
Query: 56 PQGMSRAPPSSGAPPASTAQAPCGQ---------AAYGQFGQGDVQNG---------PSS 97
P+ + PP +G P Q P A+ Q Q D+ G PS
Sbjct: 244 PEKIKSQPPGTGKPIQGPTQTPQTDHAKLPLQRDASRPQTKQADIVRGESVKPSLPSPSK 303
Query: 98 TVQMQRLPGSQPFGSP---LAPVGNQPPVLQPYG-PPPTSAQVATQLSGMQISGAVAPAP 153
Q PG P P + G P QP G P + Q T +Q G P
Sbjct: 304 PPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQPPGTTKP-- 361
Query: 154 PSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSF 213
P+ LG P + + S P+S G Q P + + P Q P+Q
Sbjct: 362 PAQPLGPAKPPAQQTGSEK-PSSEQPGPKALAQPPGVGKT---PAQQPGPAKPPTQQVGT 417
Query: 214 TPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPG---TQMTGPLGPLPPM 270
P + P L S P ++ V QP P Q PG Q TGP P +
Sbjct: 418 PKPLAQQPGLQSPAKAPGPTKT----PVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQL 473
Query: 271 HSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQ---PLPPKRLDPDAIP 327
P +P PQQ G PA+ P G P + GS PPQ P P P +
Sbjct: 474 PGPAKP--PPQQPG---PAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTK 528
Query: 328 SPIQ 331
P Q
Sbjct: 529 PPSQ 532
Score = 58.2 bits (139), Expect = 4e-08
Identities = 78/296 (26%), Positives = 104/296 (35%), Gaps = 37/296 (12%)
Query: 8 PPVPPFGQPQPIYPGYHQSSYG-GQSGSTAPAIPYGAYNGPV---PGYQQTPPQGMSRAP 63
P PP QP P P Q + Q G P P+ PG + P Q P
Sbjct: 301 PSKPPIQQPTPGKPPAQQPGHEKSQPGPAKPPAQPSGLTKPLAQQPGTVKPPVQ-----P 355
Query: 64 PSSGAPPAST---AQAPCGQAAYGQFGQGDVQNGPSSTVQ---MQRLPGSQPFGSPLAPV 117
P + PPA A+ P Q G Q GP + Q + + P QP +
Sbjct: 356 PGTTKPPAQPLGPAKPPAQQT--GSEKPSSEQPGPKALAQPPGVGKTPAQQPGPA----- 408
Query: 118 GNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSG 177
+PP Q P P + Q Q S A AP P + + P + + G
Sbjct: 409 --KPPTQQVGTPKPLAQQPGLQ------SPAKAPGPTKTPVQQPGPGKIPAQQAG---PG 457
Query: 178 LYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGP-RLPSMTGPLLPGQSF 236
+ G P SQ G P PQ+ P++ P ++ P + P T P
Sbjct: 458 KTSAQQTGPTKPPSQLPG-PAKPPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGP 516
Query: 237 GGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGP 292
PS QP S+ P + PG+ P P S QQ Q GS P + P
Sbjct: 517 AKPSPQQPG--STKPPSQQPGSAKPSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPP 570
Score = 47.0 bits (110), Expect = 1e-04
Identities = 64/232 (27%), Positives = 79/232 (34%), Gaps = 23/232 (9%)
Query: 8 PPVPPFGQPQPIYPGYHQSSY---GGQSGSTAPAIPYGAYNGPV--PGYQQTPPQGMSRA 62
PP P G +P P S Q G A A P G P PG + P Q +
Sbjct: 361 PPAQPLGPAKP--PAQQTGSEKPSSEQPGPKALAQPPGVGKTPAQQPGPAKPPTQQVGTP 418
Query: 63 PPSSGAPPA-STAQAPCG-QAAYGQFGQGDV---QNGPSSTVQMQRLPGSQPFG------ 111
P + P S A+AP + Q G G + Q GP T Q P P
Sbjct: 419 KPLAQQPGLQSPAKAPGPTKTPVQQPGPGKIPAQQAGPGKTSAQQTGPTKPPSQLPGPAK 478
Query: 112 -SPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASAS 170
P P +PP QP P S Q + Q G P+P G P SA
Sbjct: 479 PPPQQPGPAKPPPQQPGSAKPPSQQPGSTKPPPQQPGPAKPSPQQPGSTKPPSQQPGSAK 538
Query: 171 GSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPR 222
S Q P+SQ +Q P S S+ PP+ G P+
Sbjct: 539 PSAQQPSPAKPSAQQSTKPVSQTGSGKPLQPPTVS----PSAKQPPSQGLPK 586
Score = 38.9 bits (89), Expect = 0.027
Identities = 65/256 (25%), Positives = 89/256 (34%), Gaps = 53/256 (20%)
Query: 15 QPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSGAPPASTA 74
QP+ + P S S +T P IP + TPP A PS PP
Sbjct: 756 QPKMVKPTTDLVS--SSSATTKPDIPSSKVQSQAEE-KTTPPLKTDSAKPSQSFPPTGEK 812
Query: 75 QAPCGQAAYGQFGQGDV---QNGPSST--------------------VQMQRLPGSQPF- 110
+P A + GPSS +M P ++P
Sbjct: 813 VSPFDSKAIPRPASDSKIISHPGPSSESKGQKQVDPVQKKEEPKKAQTKMSPKPDAKPMP 872
Query: 111 -GSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQIS-GAVAPAPPS---------SGLG 159
GSP P G +P Q P S + Q ++ G++ AP S +G
Sbjct: 873 KGSPTPP-GPRPTAGQTVPTPQQSPKPQEQSRRFSLNLGSITDAPKSQPTTPQETVTGKL 931
Query: 160 FGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASG 219
FG S+ S + + ++ GQ P SQ+ PG Q APSQ PP S
Sbjct: 932 FGFGASIFSQASNLISTA-------GQPGPHSQSG--PGAPMKQAPAPSQ-----PPTSQ 977
Query: 220 GPRLPSMTGPLLPGQS 235
GP + P P +S
Sbjct: 978 GPPKSTGQAPPAPAKS 993
Score = 32.0 bits (71), Expect = 3.3
Identities = 40/179 (22%), Positives = 61/179 (34%), Gaps = 31/179 (17%)
Query: 96 SSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPP- 154
SS++ + P P P P PP P PP + + ++ V A P
Sbjct: 2396 SSSLDISAQPPPPPPPPPPPPPPPPPPPPPPLPPPTSPKPTILPKKKLTVASPVTTATPL 2455
Query: 155 --------------SSGLGF-----GPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQG 195
S+GL P + S P+ ++ P+ PP++
Sbjct: 2456 FDAVTTLETTAVLRSNGLPVTRICTTAPPPVPPKPSSIPSGLVFTHRPEPSKPPIAPKPV 2515
Query: 196 HPGIQT---------PQRSAPSQASSFT--PPASGGPRLPSMTGPLLPGQSFGGPSVSQ 243
P + T P+ + S SS T S +LPS T PL P + P S+
Sbjct: 2516 IPQLPTTTQKPTDIHPKPTGLSLTSSMTLNLVTSADYKLPSPTSPLSPHSNKSSPRFSK 2574
>gi|21389357 MAPK-interacting and spindle-stabilizing protein [Homo
sapiens]
Length = 245
Score = 67.8 bits (164), Expect = 5e-11
Identities = 67/238 (28%), Positives = 85/238 (35%), Gaps = 41/238 (17%)
Query: 102 QRLPGSQPFGSPLAPVG-------NQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPP 154
Q PGS P+ +P AP + P P+GP PT + P+ P
Sbjct: 32 QGWPGSNPWNNPSAPSSVPSGLPPSATPSTVPFGPAPTG---------------MYPSVP 76
Query: 155 SSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFT 214
+G GPP + S P G G YP P +P P P + T
Sbjct: 77 PTGPPPGPPAPFPPSGPSCPPPG--GPYPAPTVPGPGPTGPYPTPNMPFPELPRPYGAPT 134
Query: 215 PPASGGPRLP---SMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMH 271
PA+ GP P +GP PG P+ + P + S P PP Q G P+P
Sbjct: 135 DPAAAGPLGPWGSMSSGPWAPGMGGQYPTPNMP-YPSPGPYPAPPPPQAPGAAPPVPWGT 193
Query: 272 SPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPLPPKRLDPDAIPSP 329
P PG A GP + Y P + PT G P P P A P P
Sbjct: 194 VP--PG-----------AWGPPAPYPAPTGSYPTPGLYPTPSNPFQVPSGPSGAPPMP 238
Score = 51.6 bits (122), Expect = 4e-06
Identities = 64/218 (29%), Positives = 75/218 (34%), Gaps = 52/218 (23%)
Query: 6 SVPPV-PPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPP 64
SVPP PP G P P P G AP +P GP P TP P
Sbjct: 74 SVPPTGPPPGPPAPFPPSGPSCPPPG-GPYPAPTVPGPGPTGPYP----TPNMPFPELPR 128
Query: 65 SSGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPG-SQPFGSPLAPVGNQPPV 123
GAP A P G G + +GP + + P + P+ SP P PP
Sbjct: 129 PYGAPTDPAAAGPLGP-------WGSMSSGPWAPGMGGQYPTPNMPYPSP-GPYPAPPPP 180
Query: 124 LQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYP 183
P PP G V P +GPP + +GS+P GL YP
Sbjct: 181 QAPGAAPPVPW------------GTVPPG------AWGPPAPYPAPTGSYPTPGL---YP 219
Query: 184 QGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGP 221
P Q P S PS A PP GGP
Sbjct: 220 TPSNP----------FQVP--SGPSGA----PPMPGGP 241
Score = 46.2 bits (108), Expect = 2e-04
Identities = 47/174 (27%), Positives = 59/174 (33%), Gaps = 13/174 (7%)
Query: 151 PAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQA 210
P P G P + SA S P SGL PP + P P PS
Sbjct: 27 PGQPPQGWPGSNPWNNPSAPSSVP-SGL---------PPSATPSTVPFGPAPTGMYPSVP 76
Query: 211 SSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLG-PLPP 269
+ PP P PS PG + P+V P P P ++ P G P P
Sbjct: 77 PTGPPPGPPAPFPPSGPSCPPPGGPYPAPTVPGPGPTGPYPTPNMPFPELPRPYGAPTDP 136
Query: 270 MHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPLPPKRLDP 323
+ + +G + P G Q Y P P+ G P PP P P P
Sbjct: 137 AAAGPLGPWGSMSSGPWAPGMGGQ--YPTPNMPYPSPGPYPAPPPPQAPGAAPP 188
Score = 41.6 bits (96), Expect = 0.004
Identities = 31/96 (32%), Positives = 36/96 (37%), Gaps = 30/96 (31%)
Query: 225 SMTGPLLPGQSFGGPSV-SQPNHVSSPPQALPPG-TQMTGPLGPLPPMHSPQQPGYQPQQ 282
S T P P Q + G + + P+ SS P LPP T T P GP P
Sbjct: 23 SNTKPGQPPQGWPGSNPWNNPSAPSSVPSGLPPSATPSTVPFGPAPT------------- 69
Query: 283 NGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPLPP 318
G YP+ P G PGPP P PP
Sbjct: 70 ---------------GMYPSVPPTGPPPGPPAPFPP 90
>gi|162329583 cleavage and polyadenylation specific factor 6, 68 kD
subunit [Homo sapiens]
Length = 551
Score = 67.4 bits (163), Expect = 7e-11
Identities = 65/190 (34%), Positives = 68/190 (35%), Gaps = 26/190 (13%)
Query: 144 QISGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQ 203
Q+SG PP P G FP + G G A P P QTP
Sbjct: 179 QMSGEGKAGPPGGSSRAAFPQG-GRGRGRFPGAVPGGDRFPGPAGPGGPPPPFPAGQTPP 237
Query: 204 RSAPSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQ-ALPPGTQM-T 261
R P G P P GP PGQ P PN PP L PG
Sbjct: 238 R-----------PPLGPPGPPGPPGPPPPGQVLPPPLAGPPNRGDRPPPPVLFPGQPFGQ 286
Query: 262 GPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPL-PPKR 320
PLGPLPP P PGY GP GP GP P F P PP PL PP
Sbjct: 287 PPLGPLPPGPPPPVPGY--------GPPPGPPPPQQGPPPPPGPF--PPRPPGPLGPPLT 336
Query: 321 L-DPDAIPSP 329
L P +P P
Sbjct: 337 LAPPPHLPGP 346
Score = 61.2 bits (147), Expect = 5e-09
Identities = 66/246 (26%), Positives = 82/246 (33%), Gaps = 24/246 (9%)
Query: 60 SRAPPSSGAPPASTAQAPCGQAAYGQFGQGDVQNG--PSSTVQMQRLPGSQPFGSPLAPV 117
SR SG P G ++ F QG G P + R PG G P P
Sbjct: 171 SRKTTQSGQMSGEGKAGPPGGSSRAAFPQGGRGRGRFPGAVPGGDRFPGPAGPGGPPPPF 230
Query: 118 -GNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNS 176
Q P P GPP G + +A PP+ G PP P
Sbjct: 231 PAGQTPPRPPLGPPGPPGPPGPPPPGQVLPPPLA-GPPNRGDRPPPPVLFPGQPFGQPP- 288
Query: 177 GLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPASGGPRLPSMTGPLLPGQSF 236
G P G PP+ PG PQ+ P PP PR P GP L
Sbjct: 289 --LGPLPPGPPPPVPGYGPPPGPPPPQQGPPP------PPGPFPPRPPGPLGPPL----- 335
Query: 237 GGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHS--PQQPGYQPQQNGSFG-PARGPQ 293
+++ P H+ PP PP P PP +S P P +G P +
Sbjct: 336 ---TLAPPPHLPGPPPGAPPPAPHVNPAFFPPPTNSGMPTSDSRGPPPTDPYGRPPPYDR 392
Query: 294 SNYGGP 299
+YG P
Sbjct: 393 GDYGPP 398
Score = 53.1 bits (126), Expect = 1e-06
Identities = 63/217 (29%), Positives = 78/217 (35%), Gaps = 34/217 (15%)
Query: 9 PVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSGA 68
P P G P P +G T P P G GP PG PP G PP +G
Sbjct: 220 PAGPGGPPPPF-----------PAGQTPPRPPLGP-PGP-PGPPGPPPPGQVLPPPLAGP 266
Query: 69 PPASTAQAP----CGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPPVL 124
P P GQ +GQ G + GP V PG P P P PP
Sbjct: 267 PNRGDRPPPPVLFPGQ-PFGQPPLGPLPPGPPPPV-----PGYGPPPGPPPPQQGPPPPP 320
Query: 125 QPYGP-------PPTSAQVATQLSGMQISGAVAPAPPSSGLGFGPPTSLASASGSFPNSG 177
P+ P PP + L G GA PAP + F PPT+ S + + G
Sbjct: 321 GPFPPRPPGPLGPPLTLAPPPHLPGPP-PGAPPPAPHVNPAFFPPPTN--SGMPTSDSRG 377
Query: 178 LYGSYPQGQAPPLSQAQ-GHPGIQTPQRSAPSQASSF 213
+ P G+ PP + G PG + P + F
Sbjct: 378 PPPTDPYGRPPPYDRGDYGPPGREMDTARTPLSEAEF 414
>gi|47132519 Ras association and pleckstrin homology domains 1 isoform
1 [Homo sapiens]
Length = 1250
Score = 66.6 bits (161), Expect = 1e-10
Identities = 108/442 (24%), Positives = 144/442 (32%), Gaps = 86/442 (19%)
Query: 8 PPVPPFGQPQPIYPGYHQSSYGGQSGSTAPA-IPYGA--------------YNGPVPGYQ 52
PP PP P P P S +GS AP + Y + P P
Sbjct: 633 PPPPPPPPPPPPPPPPLPSQSAPSAGSAAPMFVKYSTITRLQNASQHSGALFKPPTPPVM 692
Query: 53 QT---------PPQGMSRAPPSSGAPP------ASTAQAPCGQAAYGQFGQGDVQNGPSS 97
Q+ PP G+ PP PP A APC + Q P
Sbjct: 693 QSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMAQLKPAPCAPS----LPQFSAPPPPLK 748
Query: 98 TVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQISGAVAPAPPSSG 157
Q+Q + P P P P L P PP + S ++ V A P +
Sbjct: 749 IHQVQHITQVAPPTPP--PPPPIPAPLPPQAPPKPLVTIPAPTSTKTVAPVVTQAAPPTP 806
Query: 158 LGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRSAPSQASSFTPPA 217
PP A +FP S + S P P + P + P Q S P
Sbjct: 807 T---PPVPPAKKQPAFPASYIPPSPPT------------PPVPVPPPTLPKQQSFCAKPP 851
Query: 218 SGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLGPLPPMHSPQQP- 276
PS P+ PSV + PP PP + + PL P+P +PQ P
Sbjct: 852 ------PSPLSPV--------PSVVKQIASQFPPPPTPPAME-SQPLKPVPANVAPQSPP 896
Query: 277 --GYQPQQNGSFGPARGPQSNYGGPYP-AAPTFGSQPGPPQPLPPKRLDPDAIPSPIQVI 333
+P+ S P P ++ P P ++ F P P P PP P A P+P
Sbjct: 897 AVKAKPKWQPSSIPV--PSPDFPPPPPESSLVFPPPPPSPVPAPPPPPPPTASPTP---- 950
Query: 334 EDDRNNRGTEPFVTGVRG--QVPPLVTTNFLVKDQGNAS-PRYIRCTSYNIPCTSDMAKQ 390
D + G + T G + PP N +K A P R P + +
Sbjct: 951 -DKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPEPKR------PSVDSLVSK 1003
Query: 391 AQVPLAAVIKPLARLPPEEASP 412
P + LPP A P
Sbjct: 1004 FTPPAESGSPSKETLPPPAAPP 1025
Score = 58.9 bits (141), Expect = 3e-08
Identities = 100/407 (24%), Positives = 138/407 (33%), Gaps = 87/407 (21%)
Query: 9 PVPPFGQPQPIYPGYHQSSYGGQSGSTAPAIPYGAY---NGPVPGYQQTPPQGMSRAPPS 65
P+PP P+P+ +S + + AP + A PVP ++ P S PPS
Sbjct: 772 PLPPQAPPKPLVTIPAPTS----TKTVAPVVTQAAPPTPTPPVPPAKKQPAFPASYIPPS 827
Query: 66 SGAPPASTAQAPCGQAAYGQFGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGN------ 119
PP P T+ Q+ ++P SPL+PV +
Sbjct: 828 PPTPPVPV---------------------PPPTLPKQQSFCAKPPPSPLSPVPSVVKQIA 866
Query: 120 -------QPPVLQ------------PYGPPPTSAQVATQLSGMQI-----------SGAV 149
PP ++ P PP A+ Q S + + S V
Sbjct: 867 SQFPPPPTPPAMESQPLKPVPANVAPQSPPAVKAKPKWQPSSIPVPSPDFPPPPPESSLV 926
Query: 150 APAPPSSGLGFGPPTSLASASGSFPNSGLYG------SYPQGQAPP-----LSQAQGHPG 198
P PP S + PP +AS + SG G S P G+ PP S + G
Sbjct: 927 FPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSG 986
Query: 199 IQTPQRSAP---SQASSFTPPA-SGGP---RLPSMTGPLLPGQ-SFGG---PSVSQPNHV 247
+ P+ P S S FTPPA SG P LP P PG+ + G P V Q V
Sbjct: 987 AEHPEPKRPSVDSLVSKFTPPAESGSPSKETLPPPAAPPKPGKLNLSGVNLPGVLQQGCV 1046
Query: 248 SSPPQALPPGTQMTGPLGPLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFG 307
S+ L + + P PP S P P+ P P G P
Sbjct: 1047 SAKAPVLSGRGKDSVVEFPSPPSDSDFPPP-PPETELPLPPIEIPAVFSGNTSPKVAVVN 1105
Query: 308 SQPGPPQPLPPKRLDPDAIPSPIQVIEDDRNNRGTEPFVTGVRGQVP 354
QP + K+ P P + +P + V QVP
Sbjct: 1106 PQPQQWSKMSVKKAPPPTRPKRNDSTRLTQAEISEQPTMATVVPQVP 1152
Score = 52.4 bits (124), Expect = 2e-06
Identities = 80/329 (24%), Positives = 123/329 (37%), Gaps = 52/329 (15%)
Query: 26 SSYGGQSGSTAPAIPYGAYNGPVPGYQQTPPQGMSRAPPSSGAPPASTAQAPCGQAAYGQ 85
SS +SGS++ +IP N + G+S P+ S + + +
Sbjct: 530 SSSSIKSGSSSSSIPESQSN-----HSNQSDSGVSDTQPAGHVRSQSIVSS-----VFSE 579
Query: 86 FGQGDVQNGPSSTVQMQRLPGSQPFGSPLAPVGNQPPVLQPYGPPPTSAQVATQLSGMQI 145
+ Q SS +M+ + ++P+ S + P+ QP ++ PY T++Q + L
Sbjct: 580 AWKRGTQLEESSKARMESM--NRPYTSLVPPLSPQPKIVTPY----TASQPSPPLPPPPP 633
Query: 146 SGAVAPAPPSSGLGFGPPTSLASASGSFPNSGLYGSYPQGQAPPLSQAQGHPGIQTPQRS 205
P PP PP L S S P++G A P+ + I Q +
Sbjct: 634 PPPPPPPPPPP-----PPPPLPSQSA--PSAG--------SAAPMFVK--YSTITRLQNA 676
Query: 206 APSQASSFTPPASGGPRLPSMTGPLLPGQSFGGPSVSQPNHVSSPPQALPPGTQMTGPLG 265
+ + F PP T P++ QS + PN V PP PP +
Sbjct: 677 SQHSGALFKPP----------TPPVMQSQSVKPQILVPPNGVVPPPPPPPPPPTPGSAMA 726
Query: 266 PLPPMHSPQQPGYQPQQNGSFGPARGPQSNYGGPYPAAPTFGSQPGPPQPLPPKRLDPDA 325
L P +P P PQ + P + Q + A PT P PP P+P L P A
Sbjct: 727 QLKP--APCAPSL-PQFSAPPPPLKIHQVQHITQV-APPT----PPPPPPIPAP-LPPQA 777
Query: 326 IPSPIQVIEDDRNNRGTEPFVTGVRGQVP 354
P P+ I + + P VT P
Sbjct: 778 PPKPLVTIPAPTSTKTVAPVVTQAAPPTP 806
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.135 0.408
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 49,895,636
Number of Sequences: 37866
Number of extensions: 3042298
Number of successful extensions: 25365
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 133
Number of HSP's successfully gapped in prelim test: 1702
Number of HSP's that attempted gapping in prelim test: 14131
Number of HSP's gapped (non-prelim): 7608
length of query: 1094
length of database: 18,247,518
effective HSP length: 113
effective length of query: 981
effective length of database: 13,968,660
effective search space: 13703255460
effective search space used: 13703255460
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.