Search of human proteins with 38371739

Search of human proteins with 38371739

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|38371739 RAB15, member RAS onocogene family [Homo sapiens]
         (208 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|38371739 RAB15, member RAS onocogene family [Homo sapiens]         427   e-120
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]           153   1e-37
gi|16933567 mel transforming oncogene [Homo sapiens]                  152   2e-37
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]      150   1e-36
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]           149   1e-36
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa...   147   6e-36
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]            147   6e-36
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]            147   6e-36
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]          145   3e-35
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap...   144   7e-35
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]           140   6e-34
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]          127   5e-30
gi|50234889 RAB43 protein [Homo sapiens]                              125   3e-29
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]        124   6e-29
gi|4758984 Ras-related protein Rab-11A [Homo sapiens]                 124   6e-29
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]          124   7e-29
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa...   119   1e-27
gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]          118   4e-27
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]         118   4e-27
gi|21361884 RAB2B protein isoform 1 [Homo sapiens]                    117   7e-27
gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]          116   1e-26
gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]          116   2e-26
gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo s...   116   2e-26
gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]           116   2e-26
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]           116   2e-26
gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]         116   2e-26
gi|19923483 GTPase Rab14 [Homo sapiens]                               115   2e-26
gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]           115   2e-26
gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]         115   3e-26
gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]          114   8e-26

>gi|38371739 RAB15, member RAS onocogene family [Homo sapiens]
          Length = 208

 Score =  427 bits (1099), Expect = e-120
 Identities = 208/208 (100%), Positives = 208/208 (100%)

Query: 1   MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQ 60
           MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQ
Sbjct: 1   MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQ 60

Query: 61  IWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEVGDATSLPGCGE 120
           IWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEVGDATSLPGCGE
Sbjct: 61  IWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEVGDATSLPGCGE 120

Query: 121 GASPGKARRGPDGKANASRKLCLPQPWMKTSGTHQKASRRSLLGIRLMRSRNGRWEESKG 180
           GASPGKARRGPDGKANASRKLCLPQPWMKTSGTHQKASRRSLLGIRLMRSRNGRWEESKG
Sbjct: 121 GASPGKARRGPDGKANASRKLCLPQPWMKTSGTHQKASRRSLLGIRLMRSRNGRWEESKG 180

Query: 181 SSWRRSMAWTSMKQVPAPTSTLKSHSRV 208
           SSWRRSMAWTSMKQVPAPTSTLKSHSRV
Sbjct: 181 SSWRRSMAWTSMKQVPAPTSTLKSHSRV 208


>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
          Length = 207

 Score =  153 bits (386), Expect = 1e-37
 Identities = 68/108 (62%), Positives = 93/108 (86%)

Query: 1   MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQ 60
           MAK YD LF+LLLIGDSGVGKTCLL RF+++ F+++ ISTIG+DFK++TIE+DG K+++Q
Sbjct: 1   MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQ 60

Query: 61  IWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDE 108
           IWDTAGQER++TIT  YYR A GI LVYDI++E+S+ +I  W+ +++E
Sbjct: 61  IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEE 108


>gi|16933567 mel transforming oncogene [Homo sapiens]
          Length = 207

 Score =  152 bits (384), Expect = 2e-37
 Identities = 68/112 (60%), Positives = 94/112 (83%)

Query: 1   MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQ 60
           MAK YD LF+LLLIGDSGVGKTC+L RF+++ F+S+ ISTIG+DFK++TIE+DG ++++Q
Sbjct: 1   MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60

Query: 61  IWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEVGDA 112
           IWDTAGQER++TIT  YYR A GI LVYDI++E+S+ +I  W+ +++E   A
Sbjct: 61  IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASA 112


>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
          Length = 200

 Score =  150 bits (378), Expect = 1e-36
 Identities = 66/106 (62%), Positives = 91/106 (85%)

Query: 3   KQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIW 62
           K YD+LF+LLLIGDSGVGKTC+L RF+D+ F+++ ISTIG+DFK+KT+E+ G K+++QIW
Sbjct: 4   KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63

Query: 63  DTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDE 108
           DTAGQER+ TIT  YYR A GI LVYDI++ +S+++I KW+ ++DE
Sbjct: 64  DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDE 109


>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  149 bits (377), Expect = 1e-36
 Identities = 64/112 (57%), Positives = 92/112 (82%)

Query: 1   MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQ 60
           MAK YD LF+LLLIGDSGVGKTCL+ RF ++ F++++ISTIG+DFK++T++++G K+++Q
Sbjct: 1   MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 60

Query: 61  IWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEVGDA 112
           +WDTAGQER++TIT  YYR A GI LVYDI+ E+S+++I  W+  + E   A
Sbjct: 61  VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASA 112


>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
           family [Homo sapiens]
          Length = 327

 Score =  147 bits (371), Expect = 6e-36
 Identities = 63/112 (56%), Positives = 91/112 (81%)

Query: 1   MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQ 60
           MAK YD LF+LLLIGDSGVGKTCL+ RF ++ F++++ISTIG+DFK++T++++G K+++Q
Sbjct: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184

Query: 61  IWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEVGDA 112
           +WDTAGQER++TIT  YYR A GI L YDI+ E+S+++I  W+  + E   A
Sbjct: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASA 236


>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  147 bits (371), Expect = 6e-36
 Identities = 63/112 (56%), Positives = 91/112 (81%)

Query: 1   MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQ 60
           MAK YD LF+LLLIGDSGVGKTCL+ RF ++ F++++ISTIG+DFK++T++++G K+++Q
Sbjct: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184

Query: 61  IWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEVGDA 112
           +WDTAGQER++TIT  YYR A GI L YDI+ E+S+++I  W+  + E   A
Sbjct: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASA 236


>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  147 bits (371), Expect = 6e-36
 Identities = 63/112 (56%), Positives = 91/112 (81%)

Query: 1   MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQ 60
           MAK YD LF+LLLIGDSGVGKTCL+ RF ++ F++++ISTIG+DFK++T++++G K+++Q
Sbjct: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184

Query: 61  IWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEVGDA 112
           +WDTAGQER++TIT  YYR A GI L YDI+ E+S+++I  W+  + E   A
Sbjct: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASA 236


>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  145 bits (365), Expect = 3e-35
 Identities = 63/107 (58%), Positives = 87/107 (81%)

Query: 1   MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQ 60
           M  +YD LF+LLLIGDSGVGK+CLL RF D+ +  S+ISTIGVDFK++TIE+DG  +++Q
Sbjct: 1   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60

Query: 61  IWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
           IWDTAGQER++TIT  YYR A GI +VYD++ + SY ++ +W+ ++D
Sbjct: 61  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEID 107


>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
           sapiens]
          Length = 205

 Score =  144 bits (362), Expect = 7e-35
 Identities = 62/107 (57%), Positives = 87/107 (81%)

Query: 1   MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQ 60
           M  +YD LF+LLLIGDSGVGK+CLL RF D+ +  S+ISTIGVDFK++TIE+DG  +++Q
Sbjct: 4   MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63

Query: 61  IWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
           IWDTAGQER++TIT  YYR A GI +VYD++ + S+ ++ +W+ ++D
Sbjct: 64  IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEID 110


>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  140 bits (354), Expect = 6e-34
 Identities = 60/108 (55%), Positives = 88/108 (81%)

Query: 1   MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQ 60
           MA+ YD LF+LL+IGDSGVGK+ LL RF DN F  S+I+TIGVDFK++T+E++G KV++Q
Sbjct: 1   MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 60

Query: 61  IWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDE 108
           IWDTAGQER++TIT  YYR   G+ +VYD++S  S+ ++ +W+ ++++
Sbjct: 61  IWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQ 108


>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
          Length = 256

 Score =  127 bits (320), Expect = 5e-30
 Identities = 53/105 (50%), Positives = 84/105 (80%), Gaps = 1/105 (0%)

Query: 5   YDVLFRLLLIGDSGVGKTCLLCRFTDNEFHS-SHISTIGVDFKMKTIEVDGIKVRIQIWD 63
           YDV F+++L+GDSGVGKTCLL RF D  F + + IST+G+DF+ K ++VDG+KV++Q+WD
Sbjct: 60  YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWD 119

Query: 64  TAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDE 108
           TAGQER++++T  YYR A  + L+YD++++ S+ +I  W++++ E
Sbjct: 120 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHE 164


>gi|50234889 RAB43 protein [Homo sapiens]
          Length = 212

 Score =  125 bits (314), Expect = 3e-29
 Identities = 56/104 (53%), Positives = 75/104 (72%)

Query: 3   KQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIW 62
           +QYD LF+L+L+GD+ VGKTC++ RF    F     STIGVDF MKT+E+ G +V++QIW
Sbjct: 13  EQYDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIW 72

Query: 63  DTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDV 106
           DTAGQER++TIT+ YYR A G  L YDI+   S+  +  W+ DV
Sbjct: 73  DTAGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDV 116


>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  124 bits (311), Expect = 6e-29
 Identities = 57/109 (52%), Positives = 81/109 (74%)

Query: 4   QYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWD 63
           +YD LF+++LIGDSGVGK+ LL RFT NEF+    STIGV+F  ++I+VDG  ++ QIWD
Sbjct: 7   EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 66

Query: 64  TAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEVGDA 112
           TAGQERY+ IT  YYR A G  LVYDI+   +Y+++ +W+ ++ +  D+
Sbjct: 67  TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADS 115


>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
          Length = 216

 Score =  124 bits (311), Expect = 6e-29
 Identities = 57/109 (52%), Positives = 81/109 (74%)

Query: 4   QYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWD 63
           +YD LF+++LIGDSGVGK+ LL RFT NEF+    STIGV+F  ++I+VDG  ++ QIWD
Sbjct: 7   EYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWD 66

Query: 64  TAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEVGDA 112
           TAGQERY+ IT  YYR A G  LVYDI+   +Y+++ +W+ ++ +  D+
Sbjct: 67  TAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADS 115


>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  124 bits (310), Expect = 7e-29
 Identities = 53/106 (50%), Positives = 82/106 (77%)

Query: 3   KQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIW 62
           + YD LF+++LIG++GVGKTCL+ RFT   F     +TIGVDF +KT+E++G KV++QIW
Sbjct: 4   EDYDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIW 63

Query: 63  DTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDE 108
           DTAGQER+++IT+ YYR A  + L YDI+ E S++ + +W+ ++++
Sbjct: 64  DTAGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQ 109


>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
           sapiens]
          Length = 223

 Score =  119 bits (299), Expect = 1e-27
 Identities = 50/105 (47%), Positives = 82/105 (78%), Gaps = 1/105 (0%)

Query: 5   YDVLFRLLLIGDSGVGKTCLLCRFTDNEFHS-SHISTIGVDFKMKTIEVDGIKVRIQIWD 63
           YD+  +++L+GD+GVGKTC L +F D  F S + I+T+G+DF+ K + VDG++V++QIWD
Sbjct: 26  YDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIWD 85

Query: 64  TAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDE 108
           TAGQER++++T  YYR AQ + L+YDI+++ S+ +I  W++++ E
Sbjct: 86  TAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHE 130


>gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]
          Length = 227

 Score =  118 bits (295), Expect = 4e-27
 Identities = 50/104 (48%), Positives = 77/104 (74%)

Query: 3   KQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIW 62
           + +D +F+LL+IG+S VGKT  L R+ D+ F S+ +ST+G+DFK+KT+  +  ++++QIW
Sbjct: 25  QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIW 84

Query: 63  DTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDV 106
           DTAGQERY+TIT  YYR A G  L+YDI++E S+  +  W + +
Sbjct: 85  DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI 128


>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
          Length = 244

 Score =  118 bits (295), Expect = 4e-27
 Identities = 53/103 (51%), Positives = 77/103 (74%)

Query: 6   DVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTA 65
           D   ++++IG  GVGKT L+ RFTD+ F  +  ST+GVDFK+KT+E+ G K+R+QIWDTA
Sbjct: 40  DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTA 99

Query: 66  GQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDE 108
           GQER+ +IT  YYR A+GI LVYDI+ + ++  + KW+  +D+
Sbjct: 100 GQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDK 142


>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
          Length = 216

 Score =  117 bits (293), Expect = 7e-27
 Identities = 49/101 (48%), Positives = 72/101 (71%)

Query: 5   YDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDT 64
           Y  LF+ ++IGD+GVGK+CLL +FTD  F   H  TIGV+F  + + +DG ++++QIWDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDT 62

Query: 65  AGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSD 105
           AGQE +++IT+ YYR A G  LVYDI+   ++ H+  W+ D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLED 103


>gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]
          Length = 206

 Score =  116 bits (291), Expect = 1e-26
 Identities = 54/104 (51%), Positives = 78/104 (75%), Gaps = 2/104 (1%)

Query: 6   DVL--FRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWD 63
           DVL   ++L+IG+SGVGK+ LL RFTD+ F     +TIGVDFK+KTI VDG K ++ IWD
Sbjct: 4   DVLTTLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWD 63

Query: 64  TAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVD 107
           TAGQER++T+T  YYR AQG+ LVYD++   ++  +  W+++++
Sbjct: 64  TAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELE 107


>gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]
          Length = 219

 Score =  116 bits (290), Expect = 2e-26
 Identities = 50/104 (48%), Positives = 75/104 (72%)

Query: 3   KQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIW 62
           + +D +F+LL+IG+S VGKT  L R+ D+ F  + +ST+G+DFK+KT+     +V++QIW
Sbjct: 17  QNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIW 76

Query: 63  DTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDV 106
           DTAGQERY+TIT  YYR A G  L+YDI++E S+  +  W + +
Sbjct: 77  DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQI 120


>gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo
           sapiens]
          Length = 731

 Score =  116 bits (290), Expect = 2e-26
 Identities = 52/129 (40%), Positives = 87/129 (67%), Gaps = 1/129 (0%)

Query: 6   DVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDTA 65
           D LF+++ +G+S VGKT  L RF ++ F     +T+G+D+++KT+ VD  +V +Q+WDTA
Sbjct: 543 DRLFKIVFVGNSAVGKTSFLRRFCEDRFSPGMAATVGIDYRVKTLNVDNSQVALQLWDTA 602

Query: 66  GQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDE-VGDATSLPGCGEGASP 124
           GQERY+ IT+Q++R+A G+ ++YD++ ++S+  + +W+S V+E VGD   +   G     
Sbjct: 603 GQERYRCITQQFFRKADGVIVMYDLTDKQSFLSVRRWLSSVEEAVGDRVPVLLLGNKLDN 662

Query: 125 GKARRGPDG 133
            K R  P G
Sbjct: 663 EKEREVPRG 671


>gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
          Length = 220

 Score =  116 bits (290), Expect = 2e-26
 Identities = 49/104 (47%), Positives = 76/104 (73%)

Query: 3   KQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIW 62
           + +D +F++L+IG+S VGKT  L R+ D+ F  + +ST+G+DFK+KTI  +  ++++QIW
Sbjct: 17  QNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIW 76

Query: 63  DTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDV 106
           DTAGQERY+TIT  YYR A G  L+YDI++E S+  +  W + +
Sbjct: 77  DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQI 120


>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
          Length = 212

 Score =  116 bits (290), Expect = 2e-26
 Identities = 50/101 (49%), Positives = 72/101 (71%)

Query: 5   YDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDT 64
           Y  LF+ ++IGD+GVGK+CLL +FTD  F   H  TIGV+F  + I +DG ++++QIWDT
Sbjct: 3   YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62

Query: 65  AGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSD 105
           AGQE +++IT+ YYR A G  LVYDI+   ++ H+  W+ D
Sbjct: 63  AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLED 103


>gi|82659107 ras-related GTP-binding protein 4b [Homo sapiens]
          Length = 213

 Score =  116 bits (290), Expect = 2e-26
 Identities = 51/105 (48%), Positives = 74/105 (70%)

Query: 1   MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQ 60
           MA+ YD LF+ L+IG +G GK+CLL +F +N+F      TIGV+F  + + V G  V++Q
Sbjct: 1   MAETYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQ 60

Query: 61  IWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSD 105
           IWDTAGQER++++T+ YYR A G  LVYDI+S  +Y  +  W++D
Sbjct: 61  IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTD 105


>gi|19923483 GTPase Rab14 [Homo sapiens]
          Length = 215

 Score =  115 bits (289), Expect = 2e-26
 Identities = 49/101 (48%), Positives = 73/101 (72%)

Query: 5   YDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIWDT 64
           Y  +F+ ++IGD GVGK+CLL +FT+ +F +    TIGV+F  + IEV G K+++QIWDT
Sbjct: 8   YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWDT 67

Query: 65  AGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSD 105
           AGQER++ +T+ YYR A G  +VYDI+   +Y H+  W++D
Sbjct: 68  AGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTD 108


>gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]
          Length = 219

 Score =  115 bits (289), Expect = 2e-26
 Identities = 49/104 (47%), Positives = 75/104 (72%)

Query: 3   KQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIW 62
           + +D +F+LLLIG+S VGKT  L R+ D+ F  + +ST+G+DFK+KT+     ++++QIW
Sbjct: 17  QNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIW 76

Query: 63  DTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDV 106
           DTAGQERY+TIT  YYR A G  L+YDI+++ S+  +  W + +
Sbjct: 77  DTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQI 120


>gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]
          Length = 217

 Score =  115 bits (287), Expect = 3e-26
 Identities = 46/110 (41%), Positives = 79/110 (71%)

Query: 3   KQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQIW 62
           + +D LF+++LIGDS VGKTC++  F    +  +  +TIGVDF ++++++DG KV++Q+W
Sbjct: 12  ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVW 71

Query: 63  DTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSDVDEVGDA 112
           DTAGQER++TIT+ YYR A    + YD++   +++ I  W+ ++++ G A
Sbjct: 72  DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAA 121


>gi|19923260 RAB4A, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  114 bits (284), Expect = 8e-26
 Identities = 51/105 (48%), Positives = 74/105 (70%)

Query: 1   MAKQYDVLFRLLLIGDSGVGKTCLLCRFTDNEFHSSHISTIGVDFKMKTIEVDGIKVRIQ 60
           M++ YD LF+ L+IG++G GK+CLL +F + +F      TIGV+F  K I V G  V++Q
Sbjct: 6   MSETYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQ 65

Query: 61  IWDTAGQERYQTITKQYYRRAQGIFLVYDISSERSYQHIMKWVSD 105
           IWDTAGQER++++T+ YYR A G  LVYDI+S  +Y  +  W++D
Sbjct: 66  IWDTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTD 110


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.132    0.407 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,426,263
Number of Sequences: 37866
Number of extensions: 365446
Number of successful extensions: 1603
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 191
Number of HSP's successfully gapped in prelim test: 85
Number of HSP's that attempted gapping in prelim test: 1322
Number of HSP's gapped (non-prelim): 282
length of query: 208
length of database: 18,247,518
effective HSP length: 98
effective length of query: 110
effective length of database: 14,536,650
effective search space: 1599031500
effective search space used: 1599031500
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.