Guide to the Human Genome
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Name: RAB15 Sequence: fasta or formatted (208aa) NCBI GI: 38371739
Description:

RAB15, member RAS onocogene family

Referenced in:

Rab

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         11           1
 C cysteine            1.9          4           1
 D aspartate           5.3         11           1
 E glutamate           3.8          8           2
 F phenylalanine       2.4          5           1
 G glycine             8.7         18           1
 H histidine           2.4          5           1
 I isoleucine          5.8         12           1
 K lysine              7.2         15           1
 L leucine             6.7         14           3
 M methionine          3.4          7           1
 N asparagine          1.4          3           1
 P proline             3.4          7           1
 Q glutamine           4.8         10           1
 R arginine            9.1         19           2
 S serine             11.1         23           2
 T threonine           6.2         13           1
 V valine              5.3         11           1
 W tryptophan          2.9          6           1
 Y tyrosine            2.9          6           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   RAB15, member RAS onocogene family 
RAB8B                 0.318   RAB8B, member RAS oncogene family 
RAB8A                 0.316   mel transforming oncogene 
RAB10                 0.311   ras-related GTP-binding protein RAB10 
RAB13                 0.308   RAB13, member RAS oncogene family 
LOC100131294          0.303   PREDICTED: similar to RAB13, member RAS oncogene fa...
LOC100131294          0.303   PREDICTED: similar to hCG24991 
LOC100131294          0.303   PREDICTED: similar to hCG24991 
RAB1B                 0.299   RAB1B, member RAS oncogene family 
RAB1A                 0.296   RAB1A, member RAS oncogene family isoform 1 
RAB35                 0.286   RAB35, member RAS oncogene family 
RAB26                 0.254   RAB26, member RAS oncogene family 
RAB43                 0.249   RAB43 protein 
RAB11B                0.246   RAB11B, member RAS oncogene family 
RAB11A                0.246   Ras-related protein Rab-11A 
RAB30                 0.246   RAB30, member RAS oncogene family 
RAB37                 0.234   RAB37, member RAS oncogene family isoform 2 
RAB3C                 0.231   RAB3C, member RAS oncogene family 
RAB12                 0.231   RAB12, member RAS oncogene family 
RAB2B                 0.229   RAB2B protein isoform 1 
RAB18                 0.226   RAB18, member RAS oncogene family 
RAB3B                 0.226   RAB3B, member RAS oncogene family 
EFCAB4B               0.226   EF-hand calcium binding domain 4B isoform a 
RAB3A                 0.226   RAB3A, member RAS oncogene family 
RAB2A                 0.226   RAB2A, member RAS oncogene family 
RAB4B                 0.226   ras-related GTP-binding protein 4b 
RAB14                 0.224   GTPase Rab14 
RAB3D                 0.224   RAB3D, member RAS oncogene family 
RAB19                 0.224   RAB19, member RAS oncogene family 
RAB4A                 0.221   RAB4A, member RAS oncogene family 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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