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Search of human proteins with 38045928
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|38045928 43 kD receptor-associated protein of the synapse
isoform 2 [Homo sapiens]
(353 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|38045928 43 kD receptor-associated protein of the synapse iso... 722 0.0
gi|15619013 43 kD receptor-associated protein of the synapse iso... 654 0.0
gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens] 77 2e-14
gi|224548927 G-protein signaling modulator 1 (AGS3-like, C. eleg... 59 7e-09
gi|224548925 G-protein signaling modulator 1 (AGS3-like, C. eleg... 59 7e-09
gi|164519122 LGN protein [Homo sapiens] 57 3e-08
gi|7662244 DAZ interacting protein 3, zinc finger [Homo sapiens] 42 0.001
gi|224809329 FK506 binding protein 5 isoform 1 [Homo sapiens] 40 0.002
gi|224809327 FK506 binding protein 5 isoform 1 [Homo sapiens] 40 0.002
gi|4758384 FK506 binding protein 5 isoform 1 [Homo sapiens] 40 0.002
gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens] 40 0.003
gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens] 40 0.003
gi|34452686 ring finger protein, LIM domain interacting [Homo sa... 39 0.007
gi|34452684 ring finger protein, LIM domain interacting [Homo sa... 39 0.007
gi|150170725 zinc and ring finger 4 [Homo sapiens] 39 0.009
gi|5803181 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizi... 38 0.012
gi|58331195 ring finger and CHY zinc finger domain containing 1 ... 37 0.020
gi|21071001 autocrine motility factor receptor [Homo sapiens] 37 0.020
gi|4503729 FK506 binding protein 52 [Homo sapiens] 37 0.027
gi|5031825 ring finger protein 103 [Homo sapiens] 37 0.035
gi|37595553 ring finger protein 111 [Homo sapiens] 37 0.035
gi|188497705 BRCA1 associated protein [Homo sapiens] 36 0.046
gi|32454739 tripartite motif-containing 3 [Homo sapiens] 36 0.046
gi|32454737 tripartite motif-containing 3 [Homo sapiens] 36 0.046
gi|7706039 ring finger protein 181 [Homo sapiens] 36 0.046
gi|27436927 synoviolin 1 isoform b [Homo sapiens] 36 0.060
gi|27436925 synoviolin 1 isoform a [Homo sapiens] 36 0.060
gi|7661950 SH2 domain binding protein 1 [Homo sapiens] 36 0.060
gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo ... 35 0.078
gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo ... 35 0.078
>gi|38045928 43 kD receptor-associated protein of the synapse
isoform 2 [Homo sapiens]
Length = 353
Score = 722 bits (1864), Expect = 0.0
Identities = 353/353 (100%), Positives = 353/353 (100%)
Query: 1 MGQDQTKQQIEKGLQLYQSNQTEKALQVWTKVLEKSSDLMGRFRVLGCLVTAHSEMGRYK 60
MGQDQTKQQIEKGLQLYQSNQTEKALQVWTKVLEKSSDLMGRFRVLGCLVTAHSEMGRYK
Sbjct: 1 MGQDQTKQQIEKGLQLYQSNQTEKALQVWTKVLEKSSDLMGRFRVLGCLVTAHSEMGRYK 60
Query: 61 EMLKFAVVQIDTARELEDADFLLESYLNLARSNEKLCEFHKTISYCKTCLGLPGTRAGAQ 120
EMLKFAVVQIDTARELEDADFLLESYLNLARSNEKLCEFHKTISYCKTCLGLPGTRAGAQ
Sbjct: 61 EMLKFAVVQIDTARELEDADFLLESYLNLARSNEKLCEFHKTISYCKTCLGLPGTRAGAQ 120
Query: 121 LGGQVSLSMGNAFLGLSVFQKALESFEKALRYAHNNDDAMLECRVCCSLGSFYAQVKDYE 180
LGGQVSLSMGNAFLGLSVFQKALESFEKALRYAHNNDDAMLECRVCCSLGSFYAQVKDYE
Sbjct: 121 LGGQVSLSMGNAFLGLSVFQKALESFEKALRYAHNNDDAMLECRVCCSLGSFYAQVKDYE 180
Query: 181 KALFFPCKAAELVNNYGKGWSLKYRAMSQYHMAVAYRLLGRLGSAMECCEESMKIALQHG 240
KALFFPCKAAELVNNYGKGWSLKYRAMSQYHMAVAYRLLGRLGSAMECCEESMKIALQHG
Sbjct: 181 KALFFPCKAAELVNNYGKGWSLKYRAMSQYHMAVAYRLLGRLGSAMECCEESMKIALQHG 240
Query: 241 DRPLQALCLLCFADIHRSRGDLELSQLKLHCLSESIYRSKGLQRELRAHVVRFHECVEET 300
DRPLQALCLLCFADIHRSRGDLELSQLKLHCLSESIYRSKGLQRELRAHVVRFHECVEET
Sbjct: 241 DRPLQALCLLCFADIHRSRGDLELSQLKLHCLSESIYRSKGLQRELRAHVVRFHECVEET 300
Query: 301 ELYCGLCGESIGEKNSRLQALPCSHIFHLRCLQNNGTRSCPNCRRSSMKPGFV 353
ELYCGLCGESIGEKNSRLQALPCSHIFHLRCLQNNGTRSCPNCRRSSMKPGFV
Sbjct: 301 ELYCGLCGESIGEKNSRLQALPCSHIFHLRCLQNNGTRSCPNCRRSSMKPGFV 353
>gi|15619013 43 kD receptor-associated protein of the synapse
isoform 1 [Homo sapiens]
Length = 412
Score = 654 bits (1686), Expect = 0.0
Identities = 335/412 (81%), Positives = 343/412 (83%), Gaps = 59/412 (14%)
Query: 1 MGQDQTKQQIEKGLQLYQSNQTEKALQVWTKVLEKSSDLMGRFRVLGCLVTAHSEMGRYK 60
MGQDQTKQQIEKGLQLYQSNQTEKALQVWTKVLEKSSDLMGRFRVLGCLVTAHSEMGRYK
Sbjct: 1 MGQDQTKQQIEKGLQLYQSNQTEKALQVWTKVLEKSSDLMGRFRVLGCLVTAHSEMGRYK 60
Query: 61 EMLKFAVVQIDTARELEDADFLLESYLNLARSNEKLCEFHKTISYCKTCLGLPGTRAGAQ 120
EMLKFAVVQIDTARELEDADFLLESYLNLARSNEKLCEFHKTISYCKTCLGLPGTRAGAQ
Sbjct: 61 EMLKFAVVQIDTARELEDADFLLESYLNLARSNEKLCEFHKTISYCKTCLGLPGTRAGAQ 120
Query: 121 LGGQVSLSMGNAFLGLSVFQKALESFEKALRYAHNNDDAMLECRVCCSLGSFYAQVKDYE 180
LGGQVSLSMGNAFLGLSVFQKALESFEKALRYAHNNDDAMLECRVCCSLGSFYAQVKDYE
Sbjct: 121 LGGQVSLSMGNAFLGLSVFQKALESFEKALRYAHNNDDAMLECRVCCSLGSFYAQVKDYE 180
Query: 181 KALFFPCKAAELVNNYGKGWSLKYRAMSQYHMAVAYRLLGRLGSAMECCEESMKIALQHG 240
KALFFPCKAAELVNNYGKGWSLKYRAMSQYHMAVAYRLLGRLGSAMECCEESMKIALQHG
Sbjct: 181 KALFFPCKAAELVNNYGKGWSLKYRAMSQYHMAVAYRLLGRLGSAMECCEESMKIALQHG 240
Query: 241 DRPLQALCLLCFADIHRSRGDLE---------------------------------LSQL 267
DRPLQALCLLCFADIHRSRGDLE +++
Sbjct: 241 DRPLQALCLLCFADIHRSRGDLETAFPRYDSAMSIMTEIGNRLGQVQALLGVAKCWVARK 300
Query: 268 KLHCLSESIYRSKGLQREL--------------------------RAHVVRFHECVEETE 301
L ++I R++ L E+ RAHVVRFHECVEETE
Sbjct: 301 ALDKALDAIERAQDLAEEVGNKLSQLKLHCLSESIYRSKGLQRELRAHVVRFHECVEETE 360
Query: 302 LYCGLCGESIGEKNSRLQALPCSHIFHLRCLQNNGTRSCPNCRRSSMKPGFV 353
LYCGLCGESIGEKNSRLQALPCSHIFHLRCLQNNGTRSCPNCRRSSMKPGFV
Sbjct: 361 LYCGLCGESIGEKNSRLQALPCSHIFHLRCLQNNGTRSCPNCRRSSMKPGFV 412
>gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens]
Length = 2481
Score = 77.0 bits (188), Expect = 2e-14
Identities = 58/239 (24%), Positives = 110/239 (46%), Gaps = 13/239 (5%)
Query: 38 DLMGRFRVLGCLVTAHSEMGRYKEMLKFAVVQIDTARELEDADFLLESYLNLARSNEKLC 97
D+ G +V L AH +G Y+E +K+ + A++L D ++Y NL + + L
Sbjct: 629 DMEGEGKVCHNLGYAHYCLGNYQEAVKYYEQDLALAKDLHDKLSQAKAYCNLGLAFKALL 688
Query: 98 EFHKTISYCKTCLGLPGTRAGAQLGGQVSLSMGNAFLGLSVFQKALESFEKALRYAHNND 157
F K K L L + +Q + ++G+ F+ A++ +E+ L AH
Sbjct: 689 NFSKAEECQKYLLSLAQSLNNSQAKFRALGNLGDIFICKKDINGAIKFYEQQLGLAHQVK 748
Query: 158 DAMLECRVCCSLGSFYAQVKDYEKALFFPCKAAELVNNYGKGWSLKYRAMSQYHMAVAYR 217
D LE +LG+ Y ++ Y+KAL + + E+ Y + L + H+A Y
Sbjct: 749 DRRLEASAYAALGTAYRMIQKYDKALGYHTQELEV---YQELSDLPGECRAHGHLAAVYM 805
Query: 218 LLGRLGSAMECCEESMKIALQHGDRPLQALCLLCFADIHRSRGDLELSQLKLHCLSESI 276
LG+ A +C EE + + + D L+A + G++ ++++ ++ + E+I
Sbjct: 806 ALGKYTMAFKCYEEQLDLGQKLKDPSLEA----------QVYGNMGITKMNMNVMEEAI 854
Score = 60.8 bits (146), Expect = 2e-09
Identities = 56/263 (21%), Positives = 115/263 (43%), Gaps = 13/263 (4%)
Query: 23 EKALQVWTKVLE---KSSDLMGRFRVLGCLVTAHSEMGRYKEMLKFAVVQIDTARELEDA 79
+KAL T+ LE + SDL G R G L + +G+Y K Q+D ++L+D
Sbjct: 771 DKALGYHTQELEVYQELSDLPGECRAHGHLAAVYMALGKYTMAFKCYEEQLDLGQKLKDP 830
Query: 80 DFLLESYLNLARSNEKLCEFHKTISYCKTCLGLPGTRAGAQL---GGQVSLSMGNAFLGL 136
+ Y N+ + + + I Y + L + +G + G+ ++G+ + L
Sbjct: 831 SLEAQVYGNMGITKMNMNVMEEAIGYFEQQLAMLQQLSGNESVLDRGRAYGNLGDCYEAL 890
Query: 137 SVFQKALESFEKALRYAHNNDDAMLECRVCCSLGSFYAQVKDYEKALFFPCKAAELVNNY 196
+++A++ +E+ L A + + + + LG+ + + ++AL K + +
Sbjct: 891 GDYEEAIKYYEQYLSVAQSLNRMQDQAKAYRGLGNGHRAMGSLQQALVCFEKRLVVAHEL 950
Query: 197 GKGWSLKYRAMSQYHMAVAYRLLGRLGSAMECCEESMKIALQHGDRPLQALCLLCFADIH 256
G+ ++ +A + + + LG A+ C E + IA DR L++ ++
Sbjct: 951 GEAFN---KAQAYGELGSLHSQLGNYEQAISCLERQLNIARDMKDRALESDAACGLGGVY 1007
Query: 257 RSRGD----LELSQLKLHCLSES 275
+ G+ L+ QL L E+
Sbjct: 1008 QQMGEYDTALQYHQLDLQIAEET 1030
Score = 55.8 bits (133), Expect = 6e-08
Identities = 62/269 (23%), Positives = 119/269 (44%), Gaps = 13/269 (4%)
Query: 22 TEKA---LQVWTKVLEKSSDLMGRFRVLGCLVTAHSEMGRYKEMLKFAVVQIDTARELED 78
TEK+ +Q V + D G R G L +A G Y+E L Q+ A +L+D
Sbjct: 250 TEKSTGYMQQDLDVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMKLKD 309
Query: 79 ADFLLESYLNLARSNEKLCEFHKTISYCKTCLGLPGTRAGAQLGGQVSLSMGNAFLGLSV 138
+ + +L + ++ ++ K C+ L + +MG ++ +
Sbjct: 310 REAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDELSEARELGNMGAVYIAMGD 369
Query: 139 FQKALESFEKALRYAHNNDDAMLECRVCCSLGSFYAQVKDYEKALFFPCKAAELVNNYGK 198
F+ A++ E+ L+ A + + E R +LGS Y ++++KA+ + EL +
Sbjct: 370 FENAVQCHEQHLKIAKDLGNKREEARAYSNLGSAYHYRRNFDKAMSYHNYVLELAQELME 429
Query: 199 GWSLKYRAMSQYHMAVAYRLLGRLGSAMECCEESMKIALQHGDRPLQALCLLCFADIHRS 258
+++ RA + + A R + L A + E+ + IA DR + IH+
Sbjct: 430 K-AIEMRAYA--GLGHAARCMQDLERAKQYHEQQLGIAEDLKDRAAEGRASSNLGIIHQM 486
Query: 259 RGDLELSQLKLH----CLSESI--YRSKG 281
+GD + + LKLH C+++ + Y ++G
Sbjct: 487 KGDYD-TALKLHKTHLCIAQELSDYAAQG 514
Score = 50.1 bits (118), Expect = 3e-06
Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 11/217 (5%)
Query: 34 EKSSDLMGRFRVLGCLVTAHSEMGRYKEMLKFAVVQIDTARELEDADFLLESYLNLARSN 93
++S D + R LG + + MG ++ ++ + A++L + +Y NL +
Sbjct: 345 KQSKDELSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAKDLGNKREEARAYSNLGSAY 404
Query: 94 EKLCEFHKTISYCKTCLGLPGTRAGAQLGGQVSLSMGNAFLGLSVFQKALESFEKALRYA 153
F K +SY L L + + +G+A + ++A + E+ L A
Sbjct: 405 HYRRNFDKAMSYHNYVLELAQELMEKAIEMRAYAGLGHAARCMQDLERAKQYHEQQLGIA 464
Query: 154 HNNDDAMLECRVCCSLGSFYAQVKDYEKALFFP----CKAAELVNNYGKGWSLKYRAMSQ 209
+ D E R +LG + DY+ AL C A EL + +G RA
Sbjct: 465 EDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQELSDYAAQG-----RAYG- 518
Query: 210 YHMAVAYRLLGRLGSAMECCEESMKIALQHGDRPLQA 246
+M AY LG A++ + ++I+++ DR QA
Sbjct: 519 -NMGNAYNALGMYDQAVKYHRQELQISMEVNDRASQA 554
Score = 48.5 bits (114), Expect = 9e-06
Identities = 40/205 (19%), Positives = 93/205 (45%), Gaps = 3/205 (1%)
Query: 32 VLEKSSDLMGRFRVLGCLVTAHSEMGRYKEMLKFAVVQIDTARELEDADFLLESYLNLAR 91
+ ++ SD + R G + A++ +G Y + +K+ ++ + E+ D ++ NLA
Sbjct: 503 IAQELSDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISMEVNDRASQASTHGNLAV 562
Query: 92 SNEKLCEFHKTISYCKTCLGLPGTRAGAQLGGQVSLSMGNAFLGLSVFQKALESFEKALR 151
+ + L + + + + L + Q + ++GN + +A +E+ LR
Sbjct: 563 AYQALGAHDRALQHYQNHLNIARELRDIQSEARALSNLGNFHCSRGEYVQAAPYYEQYLR 622
Query: 152 YAHNNDDAMLECRVCCSLGSFYAQVKDYEKALFFPCKAAELVNNYGKGWSLKYRAMSQYH 211
A + D E +VC +LG + + +Y++A+ + + L + S +A + +
Sbjct: 623 LAPDLQDMEGEGKVCHNLGYAHYCLGNYQEAVKYYEQDLALAKDLHDKLS---QAKAYCN 679
Query: 212 MAVAYRLLGRLGSAMECCEESMKIA 236
+ +A++ L A EC + + +A
Sbjct: 680 LGLAFKALLNFSKAEECQKYLLSLA 704
Score = 47.0 bits (110), Expect = 3e-05
Identities = 41/199 (20%), Positives = 86/199 (43%), Gaps = 3/199 (1%)
Query: 3 QDQTKQQIEKGLQLYQSNQTEKALQVWTKVLEKSSDLMGRF---RVLGCLVTAHSEMGRY 59
QDQ K G ++AL + K L + +L F + G L + HS++G Y
Sbjct: 914 QDQAKAYRGLGNGHRAMGSLQQALVCFEKRLVVAHELGEAFNKAQAYGELGSLHSQLGNY 973
Query: 60 KEMLKFAVVQIDTARELEDADFLLESYLNLARSNEKLCEFHKTISYCKTCLGLPGTRAGA 119
++ + Q++ AR+++D ++ L +++ E+ + Y + L +
Sbjct: 974 EQAISCLERQLNIARDMKDRALESDAACGLGGVYQQMGEYDTALQYHQLDLQIAEETNNP 1033
Query: 120 QLGGQVSLSMGNAFLGLSVFQKALESFEKALRYAHNNDDAMLECRVCCSLGSFYAQVKDY 179
G+ ++G + L F++A+ E+ L A +D + SLG + +++Y
Sbjct: 1034 TCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMNDLAAKTVSYSSLGRTHHALQNY 1093
Query: 180 EKALFFPCKAAELVNNYGK 198
+A+ + + L G+
Sbjct: 1094 SQAVMYLQEGLRLAEQLGR 1112
Score = 42.0 bits (97), Expect = 8e-04
Identities = 41/214 (19%), Positives = 85/214 (39%), Gaps = 6/214 (2%)
Query: 33 LEKSSDLMGRFRVLGCLVTAHSEMGRYKEMLKFAVVQIDTARELEDADFLLESYLNLARS 92
L + D +R LG H MG ++ L ++ A EL +A ++Y L
Sbjct: 910 LNRMQDQAKAYRGLG---NGHRAMGSLQQALVCFEKRLVVAHELGEAFNKAQAYGELGSL 966
Query: 93 NEKLCEFHKTISYCKTCLGLPGTRAGAQLGGQVSLSMGNAFLGLSVFQKALESFEKALRY 152
+ +L + + IS + L + L + +G + + + AL+ + L+
Sbjct: 967 HSQLGNYEQAISCLERQLNIARDMKDRALESDAACGLGGVYQQMGEYDTALQYHQLDLQI 1026
Query: 153 AHNNDDAMLECRVCCSLGSFYAQVKDYEKALFFPCKAAELVNNYGKGWSLKYRAMSQYHM 212
A ++ + R +LG Y + +E+A+ + + + L + +S +
Sbjct: 1027 AEETNNPTCQGRAYGNLGLTYESLGTFERAVVYQEQHLSIAAQMN---DLAAKTVSYSSL 1083
Query: 213 AVAYRLLGRLGSAMECCEESMKIALQHGDRPLQA 246
+ L A+ +E +++A Q G R +A
Sbjct: 1084 GRTHHALQNYSQAVMYLQEGLRLAEQLGRREDEA 1117
Score = 31.6 bits (70), Expect = 1.1
Identities = 34/187 (18%), Positives = 78/187 (41%), Gaps = 9/187 (4%)
Query: 3 QDQTKQQIEKGLQLYQSNQTEKALQVWTKVLEKSSDLMGR------FRVLGCLVTAHSEM 56
+++ + G + +KA+ VLE + +LM + + LG ++
Sbjct: 391 REEARAYSNLGSAYHYRRNFDKAMSYHNYVLELAQELMEKAIEMRAYAGLGHAARCMQDL 450
Query: 57 GRYKEMLKFAVVQIDTARELEDADFLLESYLNLARSNEKLCEFHKTISYCKTCLGLPGTR 116
R K+ + Q+ A +L+D + NL ++ ++ + KT L +
Sbjct: 451 ERAKQ---YHEQQLGIAEDLKDRAAEGRASSNLGIIHQMKGDYDTALKLHKTHLCIAQEL 507
Query: 117 AGAQLGGQVSLSMGNAFLGLSVFQKALESFEKALRYAHNNDDAMLECRVCCSLGSFYAQV 176
+ G+ +MGNA+ L ++ +A++ + L+ + +D + +L Y +
Sbjct: 508 SDYAAQGRAYGNMGNAYNALGMYDQAVKYHRQELQISMEVNDRASQASTHGNLAVAYQAL 567
Query: 177 KDYEKAL 183
+++AL
Sbjct: 568 GAHDRAL 574
Score = 29.3 bits (64), Expect = 5.6
Identities = 34/164 (20%), Positives = 60/164 (36%), Gaps = 37/164 (22%)
Query: 120 QLGGQVSLSMGNAFLGLSVFQKALESFEKALRYAHNNDDAMLECRVCCSLGSFYAQVKDY 179
+L G V ++ +A+ L +K+ ++ L A D ECR +LGS + +Y
Sbjct: 231 KLRGSVFSALSSAYWSLGNTEKSTGYMQQDLDVAKTLGDQTGECRAHGNLGSAFFSKGNY 290
Query: 180 EKA---------LFFPCKAAELVNNYGKGWSLKYRAMSQY-------------------- 210
+A L K E ++ Y A+ Y
Sbjct: 291 REALTNHRHQLVLAMKLKDREAASSALSSLGHVYTAIGDYPNALASHKQCVLLAKQSKDE 350
Query: 211 --------HMAVAYRLLGRLGSAMECCEESMKIALQHGDRPLQA 246
+M Y +G +A++C E+ +KIA G++ +A
Sbjct: 351 LSEARELGNMGAVYIAMGDFENAVQCHEQHLKIAKDLGNKREEA 394
>gi|224548927 G-protein signaling modulator 1 (AGS3-like, C.
elegans) isoform a [Homo sapiens]
Length = 675
Score = 58.9 bits (141), Expect = 7e-09
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 70 IDTARELEDADFLLESYLNLARSNEKLCEFHKTISYCKTCLGLPGTRAGAQLGGQVSLSM 129
+ +EL D +Y NL ++ L F + ++ K L + + ++
Sbjct: 196 LSLVKELGDRAAQGRAYGNLGNTHYLLGNFTEATTFHKERLAIAKEFGDKAAERRAYSNL 255
Query: 130 GNAFLGLSVFQKALESFEKALRYAHNNDDAMLECRVCCSLGSFYAQVKDYEKALFFPCK- 188
GNA + L F A E ++K L+ + D +E + C SLG+ Y ++DYE+A + +
Sbjct: 256 GNAHVFLGRFDVAAEYYKKTLQLSRQLRDQAVEAQACYSLGNTYTLLQDYERAAEYHLRH 315
Query: 189 ---AAELVNNYGKG---WSLKYRAMSQYHMAVAYRLLGRLGSAMECCEESMKIALQHGDR 242
A EL + G+G WSL AY +GR A+ ++ ++I+ + GDR
Sbjct: 316 LLIAQELADRVGEGRACWSL----------GNAYVSMGRPAQALTFAKKHLQISQEIGDR 365
Score = 53.9 bits (128), Expect = 2e-07
Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 3/193 (1%)
Query: 32 VLEKSSDLMGRFRVLGCLVTAHSEMGRYKEMLKFAVVQIDTARELEDADFLLESYLNLAR 91
++++ D + R G L H +G + E F ++ A+E D +Y NL
Sbjct: 198 LVKELGDRAAQGRAYGNLGNTHYLLGNFTEATTFHKERLAIAKEFGDKAAERRAYSNLGN 257
Query: 92 SNEKLCEFHKTISYCKTCLGLPGTRAGAQLGGQVSLSMGNAFLGLSVFQKALESFEKALR 151
++ L F Y K L L + Q S+GN + L +++A E + L
Sbjct: 258 AHVFLGRFDVAAEYYKKTLQLSRQLRDQAVEAQACYSLGNTYTLLQDYERAAEYHLRHLL 317
Query: 152 YAHNNDDAMLECRVCCSLGSFYAQVKDYEKALFFPCKAAELVNNYGKGWSLKYRAMSQYH 211
A D + E R C SLG+ Y + +AL F K ++ G ++ +
Sbjct: 318 IAQELADRVGEGRACWSLGNAYVSMGRPAQALTFAKKHLQISQEIGDRHG---ELTARMN 374
Query: 212 MAVAYRLLGRLGS 224
+A +LGRL S
Sbjct: 375 VAQLQLVLGRLTS 387
Score = 39.3 bits (90), Expect = 0.005
Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 5/122 (4%)
Query: 139 FQKALESFEKALRYAHNNDDAMLECRVCCSLGSFYAQVKDYEKALFFPCKAAELVNNYGK 198
F+ + FE A++ +D + LG+ Y +K++ +AL + L G
Sbjct: 44 FKTGVAFFEAAVQVG--TEDLKTLSAIYSQLGNAYFYLKEHGRALEYHKHDLLLARTIGD 101
Query: 199 GWSLKYRAMSQYHMAVAYRLLGRLGSAMECCEESMKIALQHGDRPLQALCLLCFADIHRS 258
A + ++ ++LGR A CC+ + IA + GD+ +A L +++ +
Sbjct: 102 RMG---EAKASGNLGNTLKVLGRFDEAAVCCQRHLSIAQEQGDKVGEARALYNIGNVYHA 158
Query: 259 RG 260
+G
Sbjct: 159 KG 160
>gi|224548925 G-protein signaling modulator 1 (AGS3-like, C.
elegans) isoform b [Homo sapiens]
Length = 457
Score = 58.9 bits (141), Expect = 7e-09
Identities = 47/180 (26%), Positives = 82/180 (45%), Gaps = 17/180 (9%)
Query: 70 IDTARELEDADFLLESYLNLARSNEKLCEFHKTISYCKTCLGLPGTRAGAQLGGQVSLSM 129
+ +EL D +Y NL ++ L F + ++ K L + + ++
Sbjct: 196 LSLVKELGDRAAQGRAYGNLGNTHYLLGNFTEATTFHKERLAIAKEFGDKAAERRAYSNL 255
Query: 130 GNAFLGLSVFQKALESFEKALRYAHNNDDAMLECRVCCSLGSFYAQVKDYEKALFFPCK- 188
GNA + L F A E ++K L+ + D +E + C SLG+ Y ++DYE+A + +
Sbjct: 256 GNAHVFLGRFDVAAEYYKKTLQLSRQLRDQAVEAQACYSLGNTYTLLQDYERAAEYHLRH 315
Query: 189 ---AAELVNNYGKG---WSLKYRAMSQYHMAVAYRLLGRLGSAMECCEESMKIALQHGDR 242
A EL + G+G WSL AY +GR A+ ++ ++I+ + GDR
Sbjct: 316 LLIAQELADRVGEGRACWSL----------GNAYVSMGRPAQALTFAKKHLQISQEIGDR 365
Score = 53.9 bits (128), Expect = 2e-07
Identities = 48/193 (24%), Positives = 79/193 (40%), Gaps = 3/193 (1%)
Query: 32 VLEKSSDLMGRFRVLGCLVTAHSEMGRYKEMLKFAVVQIDTARELEDADFLLESYLNLAR 91
++++ D + R G L H +G + E F ++ A+E D +Y NL
Sbjct: 198 LVKELGDRAAQGRAYGNLGNTHYLLGNFTEATTFHKERLAIAKEFGDKAAERRAYSNLGN 257
Query: 92 SNEKLCEFHKTISYCKTCLGLPGTRAGAQLGGQVSLSMGNAFLGLSVFQKALESFEKALR 151
++ L F Y K L L + Q S+GN + L +++A E + L
Sbjct: 258 AHVFLGRFDVAAEYYKKTLQLSRQLRDQAVEAQACYSLGNTYTLLQDYERAAEYHLRHLL 317
Query: 152 YAHNNDDAMLECRVCCSLGSFYAQVKDYEKALFFPCKAAELVNNYGKGWSLKYRAMSQYH 211
A D + E R C SLG+ Y + +AL F K ++ G ++ +
Sbjct: 318 IAQELADRVGEGRACWSLGNAYVSMGRPAQALTFAKKHLQISQEIGDRHG---ELTARMN 374
Query: 212 MAVAYRLLGRLGS 224
+A +LGRL S
Sbjct: 375 VAQLQLVLGRLTS 387
Score = 39.3 bits (90), Expect = 0.005
Identities = 27/122 (22%), Positives = 54/122 (44%), Gaps = 5/122 (4%)
Query: 139 FQKALESFEKALRYAHNNDDAMLECRVCCSLGSFYAQVKDYEKALFFPCKAAELVNNYGK 198
F+ + FE A++ +D + LG+ Y +K++ +AL + L G
Sbjct: 44 FKTGVAFFEAAVQVG--TEDLKTLSAIYSQLGNAYFYLKEHGRALEYHKHDLLLARTIGD 101
Query: 199 GWSLKYRAMSQYHMAVAYRLLGRLGSAMECCEESMKIALQHGDRPLQALCLLCFADIHRS 258
A + ++ ++LGR A CC+ + IA + GD+ +A L +++ +
Sbjct: 102 RMG---EAKASGNLGNTLKVLGRFDEAAVCCQRHLSIAQEQGDKVGEARALYNIGNVYHA 158
Query: 259 RG 260
+G
Sbjct: 159 KG 160
>gi|164519122 LGN protein [Homo sapiens]
Length = 684
Score = 56.6 bits (135), Expect = 3e-08
Identities = 44/194 (22%), Positives = 82/194 (42%), Gaps = 9/194 (4%)
Query: 4 DQTKQQIEKGLQLYQSNQTEKALQVWTKVLEKSSDLMGRFRVLGCLVTAHSEMGRYKEML 63
++ + ++ + Y+ N + ++ D + R G L H +G +++ +
Sbjct: 172 EEVRDALQAAVDFYEENLS---------LVTALGDRAAQGRAFGNLGNTHYLLGNFRDAV 222
Query: 64 KFAVVQIDTARELEDADFLLESYLNLARSNEKLCEFHKTISYCKTCLGLPGTRAGAQLGG 123
++ A+E D +Y NL + L EF Y K L L +
Sbjct: 223 IAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEA 282
Query: 124 QVSLSMGNAFLGLSVFQKALESFEKALRYAHNNDDAMLECRVCCSLGSFYAQVKDYEKAL 183
Q S+GN + L ++KA++ K L A +D + E R C SLG+ Y + ++++A+
Sbjct: 283 QSCYSLGNTYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAM 342
Query: 184 FFPCKAAELVNNYG 197
F K E+ G
Sbjct: 343 HFAEKHLEISREVG 356
Score = 37.0 bits (84), Expect = 0.027
Identities = 29/140 (20%), Positives = 57/140 (40%), Gaps = 12/140 (8%)
Query: 121 LGGQVSLSMGNAFLGLSVFQKALESFEKALRYAHNNDDAMLECRVCCSLGSFYAQVKDYE 180
L G+ G+ G+S F+ A++ +D + LG+ Y + DY
Sbjct: 29 LEGERLCKSGDCRAGVSFFEAAVQV---------GTEDLKTLSAIYSQLGNAYFYLHDYA 79
Query: 181 KALFFPCKAAELVNNYGKGWSLKYRAMSQYHMAVAYRLLGRLGSAMECCEESMKIALQHG 240
KAL + L G A + ++ ++LG A+ CC+ + I+ +
Sbjct: 80 KALEYHHHDLTLARTIGDQLG---EAKASGNLGNTLKVLGNFDEAIVCCQRHLDISRELN 136
Query: 241 DRPLQALCLLCFADIHRSRG 260
D+ +A L +++ ++G
Sbjct: 137 DKVGEARALYNLGNVYHAKG 156
Score = 35.8 bits (81), Expect = 0.060
Identities = 55/254 (21%), Positives = 95/254 (37%), Gaps = 40/254 (15%)
Query: 66 AVVQIDTARELEDADFLLESYLNLARSNEKLCEFHKTISYCKTCLGLPGTRAGAQLG-GQ 124
A VQ+ T ED L Y L + L ++ K + Y L L T G QLG +
Sbjct: 49 AAVQVGT----EDLKTLSAIYSQLGNAYFYLHDYAKALEYHHHDLTLART-IGDQLGEAK 103
Query: 125 VSLSMGNAFLGLSVFQKALESFEKALRYAHNNDDAMLECRVCCSLGSFYAQVKDYEKALF 184
S ++GN L F +A+ ++ L + +D + E R +LG+ Y + K
Sbjct: 104 ASGNLGNTLKVLGNFDEAIVCCQRHLDISRELNDKVGEARALYNLGNVY-----HAKGKS 158
Query: 185 FPCKAAELVNNYGKGWSLKYRAMSQYH----------------------MAVAYRLLGRL 222
F C + V + + +A ++ + + LLG
Sbjct: 159 FGCPGPQDVGEFPEEVRDALQAAVDFYEENLSLVTALGDRAAQGRAFGNLGNTHYLLGNF 218
Query: 223 GSAMECCEESMKIALQHGDRPLQALCLLCFADIHRSRGDLELSQLKLHCLSESIYRSKGL 282
A+ E+ + IA + GD+ + + + G+ E + SE ++ L
Sbjct: 219 RDAVIAHEQRLLIAKEFGDKAAERRAYSNLGNAYIFLGEFETA-------SEYYKKTLLL 271
Query: 283 QRELRAHVVRFHEC 296
R+L+ V C
Sbjct: 272 ARQLKDRAVEAQSC 285
Score = 31.6 bits (70), Expect = 1.1
Identities = 27/127 (21%), Positives = 51/127 (40%)
Query: 32 VLEKSSDLMGRFRVLGCLVTAHSEMGRYKEMLKFAVVQIDTARELEDADFLLESYLNLAR 91
+ ++ D R L A+ +G ++ ++ + AR+L+D +S +L
Sbjct: 231 IAKEFGDKAAERRAYSNLGNAYIFLGEFETASEYYKKTLLLARQLKDRAVEAQSCYSLGN 290
Query: 92 SNEKLCEFHKTISYCKTCLGLPGTRAGAQLGGQVSLSMGNAFLGLSVFQKALESFEKALR 151
+ L ++ K I Y L + G+ S+GNA+ L +A+ EK L
Sbjct: 291 TYTLLQDYEKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLE 350
Query: 152 YAHNNDD 158
+ D
Sbjct: 351 ISREVGD 357
Score = 31.2 bits (69), Expect = 1.5
Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 23 EKALQVWTK---VLEKSSDLMGRFRVLGCLVTAHSEMGRYKEMLKFAVVQIDTARELEDA 79
EKA+ K + ++ +D +G R L A++ +G + + + FA ++ +RE+ D
Sbjct: 299 EKAIDYHLKHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVGDK 358
Query: 80 DFLLESYLNLA 90
L + LNL+
Sbjct: 359 SGELTARLNLS 369
>gi|7662244 DAZ interacting protein 3, zinc finger [Homo sapiens]
Length = 1208
Score = 41.6 bits (96), Expect = 0.001
Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 8/57 (14%)
Query: 298 EETELYCGLCGESIGEKNSRLQALPCSHIFHLRC----LQNNGTRSCPNCRRSSMKP 350
EE E C +C E++ +N L LPC+H FH +C L GT CP CR + P
Sbjct: 1142 EEEEEPCVICHENLSPEN--LSVLPCAHKFHAQCIRPWLMQQGT--CPTCRLHVLLP 1194
>gi|224809329 FK506 binding protein 5 isoform 1 [Homo sapiens]
Length = 457
Score = 40.4 bits (93), Expect = 0.002
Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 81 FLLESYLNLARSNEKLCEFHKTISYCKTCLGL-PGTRAGAQLGGQVSLSMGNAFLGLSVF 139
FLL ++LNLA KL E+ K + C LGL G G+ L M F
Sbjct: 315 FLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNE-------F 367
Query: 140 QKALESFEKALRYAHNNDDAMLECRVC 166
+ A FEK L N A L+ +C
Sbjct: 368 ESAKGDFEKVLEVNPQNKAARLQISMC 394
>gi|224809327 FK506 binding protein 5 isoform 1 [Homo sapiens]
Length = 457
Score = 40.4 bits (93), Expect = 0.002
Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 81 FLLESYLNLARSNEKLCEFHKTISYCKTCLGL-PGTRAGAQLGGQVSLSMGNAFLGLSVF 139
FLL ++LNLA KL E+ K + C LGL G G+ L M F
Sbjct: 315 FLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNE-------F 367
Query: 140 QKALESFEKALRYAHNNDDAMLECRVC 166
+ A FEK L N A L+ +C
Sbjct: 368 ESAKGDFEKVLEVNPQNKAARLQISMC 394
>gi|4758384 FK506 binding protein 5 isoform 1 [Homo sapiens]
Length = 457
Score = 40.4 bits (93), Expect = 0.002
Identities = 29/87 (33%), Positives = 37/87 (42%), Gaps = 8/87 (9%)
Query: 81 FLLESYLNLARSNEKLCEFHKTISYCKTCLGL-PGTRAGAQLGGQVSLSMGNAFLGLSVF 139
FLL ++LNLA KL E+ K + C LGL G G+ L M F
Sbjct: 315 FLLAAFLNLAMCYLKLREYTKAVECCDKALGLDSANEKGLYRRGEAQLLMNE-------F 367
Query: 140 QKALESFEKALRYAHNNDDAMLECRVC 166
+ A FEK L N A L+ +C
Sbjct: 368 ESAKGDFEKVLEVNPQNKAARLQISMC 394
>gi|194248081 tripartite motif-containing 2 isoform 2 [Homo sapiens]
Length = 744
Score = 40.0 bits (92), Expect = 0.003
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 9/59 (15%)
Query: 297 VEETELYCGLCGESIGEKNSRLQALPCSHIFHLRCLQN-----NGTRSCPNCRRSSMKP 350
+++ L C +C E KN ++ LPC H F RCLQN + T SCP CR++S+ P
Sbjct: 16 IDKQFLICSICLERY--KNPKV--LPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILP 70
>gi|194248079 tripartite motif-containing 2 isoform 1 [Homo sapiens]
Length = 771
Score = 40.0 bits (92), Expect = 0.003
Identities = 24/59 (40%), Positives = 34/59 (57%), Gaps = 9/59 (15%)
Query: 297 VEETELYCGLCGESIGEKNSRLQALPCSHIFHLRCLQN-----NGTRSCPNCRRSSMKP 350
+++ L C +C E KN ++ LPC H F RCLQN + T SCP CR++S+ P
Sbjct: 43 IDKQFLICSICLERY--KNPKV--LPCLHTFCERCLQNYIPAHSLTLSCPVCRQTSILP 97
>gi|34452686 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 38.9 bits (89), Expect = 0.007
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 304 CGLCGESIGEKNSRLQALPCSHIFHLRCLQN--NGTRSCPNCRRSSMKPG 351
C +C E N +L+ LPCSH +H+ C+ + +CP CRR+ + G
Sbjct: 570 CSVCITEYTEGN-KLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASG 618
>gi|34452684 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 38.9 bits (89), Expect = 0.007
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 304 CGLCGESIGEKNSRLQALPCSHIFHLRCLQN--NGTRSCPNCRRSSMKPG 351
C +C E N +L+ LPCSH +H+ C+ + +CP CRR+ + G
Sbjct: 570 CSVCITEYTEGN-KLRKLPCSHEYHVHCIDRWLSENSTCPICRRAVLASG 618
>gi|150170725 zinc and ring finger 4 [Homo sapiens]
Length = 429
Score = 38.5 bits (88), Expect = 0.009
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 5/47 (10%)
Query: 304 CGLCGESIGEKNSRLQALPCSHIFHLRCL----QNNGTRSCPNCRRS 346
C +C + E+ +L+ LPCSH +H +C+ RSCP C++S
Sbjct: 309 CAICLDEY-EEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQS 354
>gi|5803181 stress-induced-phosphoprotein 1 (Hsp70/Hsp90-organizing
protein) [Homo sapiens]
Length = 543
Score = 38.1 bits (87), Expect = 0.012
Identities = 29/105 (27%), Positives = 46/105 (43%), Gaps = 15/105 (14%)
Query: 130 GNAFLGLSVFQKALESFEKALRYAHNNDDAMLECRVCCSLGSFYAQVKDYEKALFFPCKA 189
GN L + AL+ + +A++ +N + + + YA+ DY+KA CK
Sbjct: 11 GNKALSVGNIDDALQCYSEAIKLDPHNHV------LYSNRSAAYAKKGDYQKAYEDGCKT 64
Query: 190 AELVNNYGKGWSLKYRAMSQYHMAVAYRLLGRLGSAMECCEESMK 234
+L ++GKG+S K A A L R A EE +K
Sbjct: 65 VDLKPDWGKGYSRK---------AAALEFLNRFEEAKRTYEEGLK 100
>gi|58331195 ring finger and CHY zinc finger domain containing 1
isoform 1 [Homo sapiens]
Length = 261
Score = 37.4 bits (85), Expect = 0.020
Identities = 24/83 (28%), Positives = 34/83 (40%), Gaps = 13/83 (15%)
Query: 270 HCLSESIYRSKGLQRELRAHVVRFHECVEETELY-CGLCGESIGEKNSRLQALPCSHIFH 328
HCL ++ + LQ H+C+E C +C E I LPC H+ H
Sbjct: 118 HCLKCNLCLAMNLQGR--------HKCIENVSRQNCPICLEDIHTSRVVAHVLPCGHLLH 169
Query: 329 LRCLQ---NNGTRSCPNCRRSSM 348
C + G R CP C S++
Sbjct: 170 RTCYEEMLKEGYR-CPLCMHSAL 191
>gi|21071001 autocrine motility factor receptor [Homo sapiens]
Length = 643
Score = 37.4 bits (85), Expect = 0.020
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 13/107 (12%)
Query: 249 LLCFADIHRSRGDLEL-SQLK--LHCLSESIYRSKGLQRELRAHVVRFHECVEETELY-- 303
+L F +I S L + QL+ H + I R K R + RF E
Sbjct: 279 MLLFGNIWLSMASLVIFMQLRYLFHEVQRRIRRHKNYLRVVGNMEARFAVATPEELAVNN 338
Query: 304 --CGLCGESIGEKNSRLQALPCSHIFHLRCLQN--NGTRSCPNCRRS 346
C +C +S+ + LPC H+FH CL++ SCP CR S
Sbjct: 339 DDCAICWDSM----QAARKLPCGHLFHNSCLRSWLEQDTSCPTCRMS 381
>gi|4503729 FK506 binding protein 52 [Homo sapiens]
Length = 459
Score = 37.0 bits (84), Expect = 0.027
Identities = 39/153 (25%), Positives = 62/153 (40%), Gaps = 18/153 (11%)
Query: 23 EKALQVWTKVLEKSSDLMGRFRVLGCLVTAHSEMGRYKEMLK-----FAVVQIDTARELE 77
EKA + W E+ + + G T + + G+YK+ L + ++ +++ E
Sbjct: 253 EKAKESWEMNSEEKLEQSTIVKERG---TVYFKEGKYKQALLQYKKIVSWLEYESSFSNE 309
Query: 78 DAD----FLLESYLNLARSNEKLCEFHKTISYCKTCLGLPGTRAGAQLGGQVSLSMGNAF 133
+A L S+LNLA + KL F I C L L G A
Sbjct: 310 EAQKAQALRLASHLNLAMCHLKLQAFSAAIESCNKALELDSNNEKGLF------RRGEAH 363
Query: 134 LGLSVFQKALESFEKALRYAHNNDDAMLECRVC 166
L ++ F+ A F+K L+ NN A + VC
Sbjct: 364 LAVNDFELARADFQKVLQLYPNNKAAKTQLAVC 396
>gi|5031825 ring finger protein 103 [Homo sapiens]
Length = 685
Score = 36.6 bits (83), Expect = 0.035
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Query: 304 CGLCGESIGEKNSRLQALPCSHIFHLRCL---QNNGTRSCPNCRRSSMK 349
C +C E+ E L LPC H+FH C+ G CP CR S K
Sbjct: 621 CVVCLENF-ENGCLLMGLPCGHVFHQNCIVMWLAGGRHCCPVCRWPSYK 668
>gi|37595553 ring finger protein 111 [Homo sapiens]
Length = 986
Score = 36.6 bits (83), Expect = 0.035
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 298 EETELYCGLCGESIGEKNSRLQALPCSHIFHLRCLQN--NGTRSCPNCR 344
E+TE C +C SI E+ ++ LPC H+FH C+ + CP CR
Sbjct: 928 EDTEEKCTIC-LSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICR 975
>gi|188497705 BRCA1 associated protein [Homo sapiens]
Length = 592
Score = 36.2 bits (82), Expect = 0.046
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 304 CGLCGESIGEKNSRLQALPCSHIFHLRCLQNNGTRSCPNCR 344
C +C E + E + + C+H FH +CLQ +CP CR
Sbjct: 264 CTVCLERMDESVNGILTTLCNHSFHSQCLQRWDDTTCPVCR 304
>gi|32454739 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 36.2 bits (82), Expect = 0.046
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Query: 319 QALPCSHIFHLRCLQN-----NGTRSCPNCRRSSMKP 350
+ LPC H F RCLQN + T SCP CR++S+ P
Sbjct: 33 KVLPCLHTFCERCLQNYIPAQSLTLSCPVCRQTSILP 69
>gi|32454737 tripartite motif-containing 3 [Homo sapiens]
Length = 744
Score = 36.2 bits (82), Expect = 0.046
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 5/37 (13%)
Query: 319 QALPCSHIFHLRCLQN-----NGTRSCPNCRRSSMKP 350
+ LPC H F RCLQN + T SCP CR++S+ P
Sbjct: 33 KVLPCLHTFCERCLQNYIPAQSLTLSCPVCRQTSILP 69
>gi|7706039 ring finger protein 181 [Homo sapiens]
Length = 153
Score = 36.2 bits (82), Expect = 0.046
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 299 ETELYCGLCGESIGEKNSRLQALPCSHIFHLRCLQN--NGTRSCPNCR 344
+ EL C +C E+ + ++ +PC H+FH C+ + T SCP CR
Sbjct: 71 QAELKCPVCLLEFEEEETAIE-MPCHHLFHSSCILPWLSKTNSCPLCR 117
>gi|27436927 synoviolin 1 isoform b [Homo sapiens]
Length = 617
Score = 35.8 bits (81), Expect = 0.060
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 304 CGLCGESIGEKNSRLQALPCSHIFHLRCLQN--NGTRSCPNCRRSSMK 349
C +C E E + + LPC+HIFH CL++ ++CP CR ++
Sbjct: 291 CIICRE---EMVTGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLR 335
>gi|27436925 synoviolin 1 isoform a [Homo sapiens]
Length = 616
Score = 35.8 bits (81), Expect = 0.060
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 304 CGLCGESIGEKNSRLQALPCSHIFHLRCLQN--NGTRSCPNCRRSSMK 349
C +C E E + + LPC+HIFH CL++ ++CP CR ++
Sbjct: 291 CIICRE---EMVTGAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLR 335
>gi|7661950 SH2 domain binding protein 1 [Homo sapiens]
Length = 1173
Score = 35.8 bits (81), Expect = 0.060
Identities = 40/186 (21%), Positives = 70/186 (37%), Gaps = 36/186 (19%)
Query: 3 QDQTKQQIEKGLQLYQSNQTEKALQVWTKVLE--KSSDLMGRFRVLGCLV---------- 50
+DQ K+ I KG + Q ++ W ++ + + +D+ G G
Sbjct: 389 EDQEKRDIAKGHLKKVTEQYPDDVEAWIELAQILEQTDIQGALSAYGTATRILQEKVQAD 448
Query: 51 ----------TAHSEMGRYKEMLKFAVVQIDTARELEDAD------FLLESYLNLARSNE 94
H +G E K+ + +D A+ + D + + NLAR E
Sbjct: 449 VPPEILNNVGALHFRLGNLGEAKKYFLASLDRAKAEAEHDEHYYNAISVTTSYNLARLYE 508
Query: 95 KLCEFHKTISYCKTCLGLPGTRAGAQLG-GQVSLSMGNAFLGLSVFQKALESFEKALRYA 153
+CEFH+ K L L G ++ GN F +A + F++AL+
Sbjct: 509 AMCEFHEAEKLYKNILREHPNYVDCYLRLGAMARDKGN-------FYEASDWFKEALQIN 561
Query: 154 HNNDDA 159
++ DA
Sbjct: 562 QDHPDA 567
>gi|239749332 PREDICTED: hypothetical protein XP_002347002 [Homo
sapiens]
Length = 183
Score = 35.4 bits (80), Expect = 0.078
Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 24/107 (22%)
Query: 243 PLQALCLLCFADIHRSRGDLELSQLKLHCLSESIY---RSKGLQRELRAHVVRFHECVEE 299
P Q L + + + R LS L+ CL E +Y R K + E+ V+ E V
Sbjct: 42 PGQPLLAILLTEEEQVRTAQRLSLLQ--CLPEEVYDPGRDKS-EEEMPECVICLLEFV-- 96
Query: 300 TELYCGLCGESIGEKNSRLQALPCSHIFHLRCLQNNGTRS--CPNCR 344
CG+ I + LPC H FHL C+ RS CP CR
Sbjct: 97 -------CGDPI-------RCLPCKHFFHLDCIDTWLLRSFTCPYCR 129
>gi|239743424 PREDICTED: hypothetical protein XP_002342853 [Homo
sapiens]
Length = 183
Score = 35.4 bits (80), Expect = 0.078
Identities = 34/107 (31%), Positives = 45/107 (42%), Gaps = 24/107 (22%)
Query: 243 PLQALCLLCFADIHRSRGDLELSQLKLHCLSESIY---RSKGLQRELRAHVVRFHECVEE 299
P Q L + + + R LS L+ CL E +Y R K + E+ V+ E V
Sbjct: 42 PGQPLLAILLTEEEQVRTAQRLSLLQ--CLPEEVYDPGRDKS-EEEMPECVICLLEFV-- 96
Query: 300 TELYCGLCGESIGEKNSRLQALPCSHIFHLRCLQNNGTRS--CPNCR 344
CG+ I + LPC H FHL C+ RS CP CR
Sbjct: 97 -------CGDPI-------RCLPCKHFFHLDCIDTWLLRSFTCPYCR 129
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.135 0.412
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,731,083
Number of Sequences: 37866
Number of extensions: 520770
Number of successful extensions: 1797
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 100
Number of HSP's that attempted gapping in prelim test: 1693
Number of HSP's gapped (non-prelim): 175
length of query: 353
length of database: 18,247,518
effective HSP length: 103
effective length of query: 250
effective length of database: 14,347,320
effective search space: 3586830000
effective search space used: 3586830000
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.