Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: RNF41 Sequence: fasta or formatted (246aa) NCBI GI: 37588859
Description:

ring finger protein 41 isoform 2

Referenced in:

Ring Finger Proteins

Other entries for this name:
alt prot [317aa] ring finger protein 41 isoform 1
alt prot [317aa] ring finger protein 41 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.3         18           1
 C cysteine            3.3          8           1
 D aspartate           3.3          8           2
 E glutamate           9.3         23           2
 F phenylalanine       0.8          2           1
 G glycine             4.5         11           2
 H histidine           3.7          9           1
 I isoleucine          5.7         14           1
 K lysine              4.5         11           1
 L leucine             8.9         22           2
 M methionine          4.5         11           1
 N asparagine          6.5         16           1
 P proline             4.5         11           1
 Q glutamine           6.9         17           4
 R arginine            6.5         16           2
 S serine              5.3         13           1
 T threonine           3.3          8           1
 V valine              8.1         20           3
 W tryptophan          1.2          3           1
 Y tyrosine            2.0          5           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   ring finger protein 41 isoform 2 
RNF41                 1.000   ring finger protein 41 isoform 1 
RNF41                 1.000   ring finger protein 41 isoform 1 
PDZRN3                0.042   PDZ domain containing ring finger 3 
RNF151                0.025   ring finger protein 151 
KRT5                  0.017   keratin 5 
SLK                   0.017   serine/threonine kinase 2 
CEP55                 0.015   centrosomal protein 55kDa 
CEP55                 0.015   centrosomal protein 55kDa 
KRT3                  0.015   keratin 3 
KIAA0100              0.015   hypothetical protein LOC9703 
RPGRIP1L              0.015   RPGRIP1-like isoform b 
RPGRIP1L              0.015   RPGRIP1-like isoform a 
KRT76                 0.013   keratin 76 
SERPINB3              0.013   serine (or cysteine) proteinase inhibitor, clade B (o...
MYO18A                0.013   myosin 18A isoform b 
MYO18A                0.013   myosin 18A isoform a 
TRAF4                 0.013   TNF receptor-associated factor 4 
CCDC18                0.013   sarcoma antigen NY-SAR-41 
TXNDC11               0.011   thioredoxin domain containing 11 
FAR2                  0.011   fatty acyl CoA reductase 2 
GOLSYN                0.011   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.011   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.011   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.011   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.011   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.011   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.011   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.011   Golgi-localized syntaphilin-related protein isoform...
GOLSYN                0.011   Golgi-localized syntaphilin-related protein isoform...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press