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Search of human proteins with 37537706
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|37537706 La ribonucleoprotein domain family, member 6
isoform 2 [Homo sapiens]
(93 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|37537706 La ribonucleoprotein domain family, member 6 isoform... 185 6e-48
gi|37537710 La ribonucleoprotein domain family, member 6 isoform... 136 3e-33
gi|24308326 BR serine/threonine kinase 1 [Homo sapiens] 32 0.084
gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens] 32 0.14
gi|151101459 SAPS domain family, member 1 [Homo sapiens] 31 0.19
gi|55741655 anoctamin 8 [Homo sapiens] 31 0.25
gi|166795264 AE binding protein 2 isoform b [Homo sapiens] 30 0.32
gi|166795262 AE binding protein 2 isoform a [Homo sapiens] 30 0.32
gi|28316810 coiled-coil domain containing 107 [Homo sapiens] 30 0.42
gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [H... 30 0.55
gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens] 30 0.55
gi|145309298 coiled-coil domain containing 16 [Homo sapiens] 30 0.55
gi|37622907 voltage-gated sodium channel type V alpha isoform a ... 29 0.93
gi|150417969 voltage-gated sodium channel type V alpha isoform d... 29 0.93
gi|150417967 voltage-gated sodium channel type V alpha isoform c... 29 0.93
gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens] 29 0.93
gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens] 29 0.93
gi|116008190 myosin light chain kinase isoform 3B [Homo sapiens] 29 0.93
gi|116008188 myosin light chain kinase isoform 2 [Homo sapiens] 29 0.93
gi|239748090 PREDICTED: similar to sodium channel, voltage-gated... 29 0.93
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 29 0.93
gi|100816397 MYST histone acetyltransferase (monocytic leukemia)... 29 0.93
gi|239755394 PREDICTED: hypothetical protein [Homo sapiens] 28 1.2
gi|239744215 PREDICTED: hypothetical protein [Homo sapiens] 28 1.2
gi|149363666 phosphodiesterase 4C isoform PDE4C-2 [Homo sapiens] 28 1.2
gi|149363646 phosphodiesterase 4C isoform PDE4C-3 [Homo sapiens] 28 1.2
gi|115529445 phosphodiesterase 4C isoform PDE4C-1 [Homo sapiens] 28 1.2
gi|5729804 nudix-type motif 3 [Homo sapiens] 28 1.2
gi|122937267 lemur tyrosine kinase 3 [Homo sapiens] 28 1.2
gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens] 28 1.2
>gi|37537706 La ribonucleoprotein domain family, member 6 isoform
2 [Homo sapiens]
Length = 93
Score = 185 bits (470), Expect = 6e-48
Identities = 93/93 (100%), Positives = 93/93 (100%)
Query: 1 MAQSGGEARPGPKTAVQIRVAIQEAEDVDELEDEEEGAETRGAGDPARYLSPGWGSASEE 60
MAQSGGEARPGPKTAVQIRVAIQEAEDVDELEDEEEGAETRGAGDPARYLSPGWGSASEE
Sbjct: 1 MAQSGGEARPGPKTAVQIRVAIQEAEDVDELEDEEEGAETRGAGDPARYLSPGWGSASEE 60
Query: 61 EPSRGHRNRSSVNSRTMLASFIVSSAPSTAPST 93
EPSRGHRNRSSVNSRTMLASFIVSSAPSTAPST
Sbjct: 61 EPSRGHRNRSSVNSRTMLASFIVSSAPSTAPST 93
>gi|37537710 La ribonucleoprotein domain family, member 6 isoform
1 [Homo sapiens]
Length = 491
Score = 136 bits (343), Expect = 3e-33
Identities = 66/66 (100%), Positives = 66/66 (100%)
Query: 1 MAQSGGEARPGPKTAVQIRVAIQEAEDVDELEDEEEGAETRGAGDPARYLSPGWGSASEE 60
MAQSGGEARPGPKTAVQIRVAIQEAEDVDELEDEEEGAETRGAGDPARYLSPGWGSASEE
Sbjct: 1 MAQSGGEARPGPKTAVQIRVAIQEAEDVDELEDEEEGAETRGAGDPARYLSPGWGSASEE 60
Query: 61 EPSRGH 66
EPSRGH
Sbjct: 61 EPSRGH 66
>gi|24308326 BR serine/threonine kinase 1 [Homo sapiens]
Length = 778
Score = 32.3 bits (72), Expect = 0.084
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 20 VAIQEAEDVDELEDEEEGAETRGAGDPARYLSPGWGSASEE---EPSRG 65
++ + V L DE+ GA+TR AG P R L P G E P RG
Sbjct: 714 LSTHDQPSVQALADEKNGAQTRPAGAPPRSLQPPPGRPDPELSSSPRRG 762
>gi|145580582 uromodulin-like 1 isoform 2 precursor [Homo sapiens]
Length = 1446
Score = 31.6 bits (70), Expect = 0.14
Identities = 15/43 (34%), Positives = 24/43 (55%)
Query: 51 SPGWGSASEEEPSRGHRNRSSVNSRTMLASFIVSSAPSTAPST 93
SP GS S+E PS+G +++S + R + +S+P ST
Sbjct: 702 SPSQGSPSQESPSQGSTSQASPSHRNTIGVIGTTSSPKATGST 744
>gi|151101459 SAPS domain family, member 1 [Homo sapiens]
Length = 881
Score = 31.2 bits (69), Expect = 0.19
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 10 PGPKTAVQIRVAIQEAEDVDELEDEEE-GAETRGAGDPARYLSPG 53
PG ++ +E ED +E EDEE G RG P Y SPG
Sbjct: 660 PGVRSGGSTDSEDEEEEDEEEEEDEEGIGCAARGGATPLSYPSPG 704
>gi|55741655 anoctamin 8 [Homo sapiens]
Length = 1232
Score = 30.8 bits (68), Expect = 0.25
Identities = 17/38 (44%), Positives = 20/38 (52%)
Query: 2 AQSGGEARPGPKTAVQIRVAIQEAEDVDELEDEEEGAE 39
A GGE GP + +E ED +E EDEEEG E
Sbjct: 567 AGEGGEEGDGPPGGKEEDEDDEEEEDEEEEEDEEEGEE 604
>gi|166795264 AE binding protein 2 isoform b [Homo sapiens]
Length = 517
Score = 30.4 bits (67), Expect = 0.32
Identities = 33/109 (30%), Positives = 42/109 (38%), Gaps = 29/109 (26%)
Query: 5 GGEAR----PGPKTAVQIRVAIQEAEDVDELEDEEE---------------GAETRGAGD 45
GGEA P P++A Q E ED +E EDE G+ + D
Sbjct: 76 GGEAETMSEPSPESASQAGEDEDEEEDDEEEEDESSSSGGGEEESSAESLVGSSGGSSSD 135
Query: 46 PARYLSPGWGSASE---------EEPSRGHRNRSSVNSRTMLASFIVSS 85
R LSPG S+S EEP +G R +S +VSS
Sbjct: 136 ETRSLSPGAASSSSGDGDGKEGLEEP-KGPRGSQGGGGGGSSSSSVVSS 183
>gi|166795262 AE binding protein 2 isoform a [Homo sapiens]
Length = 503
Score = 30.4 bits (67), Expect = 0.32
Identities = 33/109 (30%), Positives = 42/109 (38%), Gaps = 29/109 (26%)
Query: 5 GGEAR----PGPKTAVQIRVAIQEAEDVDELEDEEE---------------GAETRGAGD 45
GGEA P P++A Q E ED +E EDE G+ + D
Sbjct: 76 GGEAETMSEPSPESASQAGEDEDEEEDDEEEEDESSSSGGGEEESSAESLVGSSGGSSSD 135
Query: 46 PARYLSPGWGSASE---------EEPSRGHRNRSSVNSRTMLASFIVSS 85
R LSPG S+S EEP +G R +S +VSS
Sbjct: 136 ETRSLSPGAASSSSGDGDGKEGLEEP-KGPRGSQGGGGGGSSSSSVVSS 183
>gi|28316810 coiled-coil domain containing 107 [Homo sapiens]
Length = 283
Score = 30.0 bits (66), Expect = 0.42
Identities = 16/46 (34%), Positives = 23/46 (50%)
Query: 26 EDVDELEDEEEGAETRGAGDPARYLSPGWGSASEEEPSRGHRNRSS 71
ED EDEEE +++ +P + + W A+ E RG R R S
Sbjct: 209 EDFCLKEDEEEVGDSQAWEEPTNWSTETWNLATSWEVGRGLRRRCS 254
>gi|109255243 jumonji, AT rich interactive domain 1C isoform 1 [Homo
sapiens]
Length = 1560
Score = 29.6 bits (65), Expect = 0.55
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 4/49 (8%)
Query: 17 QIRVAIQEAEDVDELEDEEEGAETRGAGDPARYLSPGWGSASEEEPSRG 65
++R + EAE+V E E+ EE ET G G PA P GS S +E G
Sbjct: 1481 RVRSSGPEAEEVQEEEELEE--ETGGEGPPAPI--PTTGSPSTQENQNG 1525
>gi|132626688 mediator of DNA-damage checkpoint 1 [Homo sapiens]
Length = 2089
Score = 29.6 bits (65), Expect = 0.55
Identities = 28/101 (27%), Positives = 42/101 (41%), Gaps = 23/101 (22%)
Query: 12 PKTAVQIRVAIQEAEDVDE-LEDEEEGAETRGAGDPARYLSPGW---------GSASEEE 61
P+T V +Q + D+ + E TRG D + +P SAS ++
Sbjct: 1445 PETVVPTAPELQPSTSTDQPVTPEPTSQATRGRTDRSSVKTPETVVPTAPELQASASTDQ 1504
Query: 62 P---------SRGHRNRSSVNSRTMLASFIVSSAPSTAPST 93
P +RG +NRSSV + +V +AP PST
Sbjct: 1505 PVTSEPTSRTTRGRKNRSSVKT----PETVVPAAPELQPST 1541
>gi|145309298 coiled-coil domain containing 16 [Homo sapiens]
Length = 372
Score = 29.6 bits (65), Expect = 0.55
Identities = 16/43 (37%), Positives = 22/43 (51%)
Query: 22 IQEAEDVDELEDEEEGAETRGAGDPARYLSPGWGSASEEEPSR 64
+ + ED +E E+EEEG R GD ++ LS G SR
Sbjct: 156 LPDYEDEEEEEEEEEGDGERKRGDASKPLSDAQGKEHSVSSSR 198
>gi|37622907 voltage-gated sodium channel type V alpha isoform a [Homo
sapiens]
Length = 2016
Score = 28.9 bits (63), Expect = 0.93
Identities = 20/75 (26%), Positives = 29/75 (38%)
Query: 6 GEARPGPKTAVQIRVAIQEAEDVDELEDEEEGAETRGAGDPARYLSPGWGSASEEEPSRG 65
G+ PG V + +A+ E++ D+ EDEE T + P G SR
Sbjct: 1035 GQGTPGDPEPVCVPIAVAESDTDDQEEDEENSLGTEEESSKQQESQPVSGGPEAPPDSRT 1094
Query: 66 HRNRSSVNSRTMLAS 80
S+ S AS
Sbjct: 1095 WSQVSATASSEAEAS 1109
>gi|150417969 voltage-gated sodium channel type V alpha isoform d
[Homo sapiens]
Length = 1998
Score = 28.9 bits (63), Expect = 0.93
Identities = 20/75 (26%), Positives = 29/75 (38%)
Query: 6 GEARPGPKTAVQIRVAIQEAEDVDELEDEEEGAETRGAGDPARYLSPGWGSASEEEPSRG 65
G+ PG V + +A+ E++ D+ EDEE T + P G SR
Sbjct: 1035 GQGTPGDPEPVCVPIAVAESDTDDQEEDEENSLGTEEESSKQQESQPVSGGPEAPPDSRT 1094
Query: 66 HRNRSSVNSRTMLAS 80
S+ S AS
Sbjct: 1095 WSQVSATASSEAEAS 1109
>gi|150417967 voltage-gated sodium channel type V alpha isoform c
[Homo sapiens]
Length = 2016
Score = 28.9 bits (63), Expect = 0.93
Identities = 20/75 (26%), Positives = 29/75 (38%)
Query: 6 GEARPGPKTAVQIRVAIQEAEDVDELEDEEEGAETRGAGDPARYLSPGWGSASEEEPSRG 65
G+ PG V + +A+ E++ D+ EDEE T + P G SR
Sbjct: 1035 GQGTPGDPEPVCVPIAVAESDTDDQEEDEENSLGTEEESSKQQESQPVSGGPEAPPDSRT 1094
Query: 66 HRNRSSVNSRTMLAS 80
S+ S AS
Sbjct: 1095 WSQVSATASSEAEAS 1109
>gi|116008194 myosin light chain kinase isoform 3A [Homo sapiens]
Length = 1863
Score = 28.9 bits (63), Expect = 0.93
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 12/64 (18%)
Query: 30 ELEDEEEGAETRGAGDPARYLSPGWGSASEEEPSRGHRNRSSVNSRTMLASFIVSSAPST 89
+L+ E A+++ P R SP W + S+ +P R + S +S P T
Sbjct: 284 KLDSLEAAAKSKNCSSPQRGGSPPWAANSQPQPPRESKLESCKDS------------PRT 331
Query: 90 APST 93
AP T
Sbjct: 332 APQT 335
>gi|116008192 myosin light chain kinase isoform 1 [Homo sapiens]
Length = 1914
Score = 28.9 bits (63), Expect = 0.93
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 12/64 (18%)
Query: 30 ELEDEEEGAETRGAGDPARYLSPGWGSASEEEPSRGHRNRSSVNSRTMLASFIVSSAPST 89
+L+ E A+++ P R SP W + S+ +P R + S +S P T
Sbjct: 284 KLDSLEAAAKSKNCSSPQRGGSPPWAANSQPQPPRESKLESCKDS------------PRT 331
Query: 90 APST 93
AP T
Sbjct: 332 APQT 335
>gi|116008190 myosin light chain kinase isoform 3B [Homo sapiens]
Length = 1794
Score = 28.9 bits (63), Expect = 0.93
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 12/64 (18%)
Query: 30 ELEDEEEGAETRGAGDPARYLSPGWGSASEEEPSRGHRNRSSVNSRTMLASFIVSSAPST 89
+L+ E A+++ P R SP W + S+ +P R + S +S P T
Sbjct: 284 KLDSLEAAAKSKNCSSPQRGGSPPWAANSQPQPPRESKLESCKDS------------PRT 331
Query: 90 APST 93
AP T
Sbjct: 332 APQT 335
>gi|116008188 myosin light chain kinase isoform 2 [Homo sapiens]
Length = 1845
Score = 28.9 bits (63), Expect = 0.93
Identities = 18/64 (28%), Positives = 28/64 (43%), Gaps = 12/64 (18%)
Query: 30 ELEDEEEGAETRGAGDPARYLSPGWGSASEEEPSRGHRNRSSVNSRTMLASFIVSSAPST 89
+L+ E A+++ P R SP W + S+ +P R + S +S P T
Sbjct: 284 KLDSLEAAAKSKNCSSPQRGGSPPWAANSQPQPPRESKLESCKDS------------PRT 331
Query: 90 APST 93
AP T
Sbjct: 332 APQT 335
>gi|239748090 PREDICTED: similar to sodium channel, voltage-gated,
type V, alpha (long QT syndrome 3) [Homo sapiens]
Length = 1637
Score = 28.9 bits (63), Expect = 0.93
Identities = 20/75 (26%), Positives = 29/75 (38%)
Query: 6 GEARPGPKTAVQIRVAIQEAEDVDELEDEEEGAETRGAGDPARYLSPGWGSASEEEPSRG 65
G+ PG V + +A+ E++ D+ EDEE T + P G SR
Sbjct: 736 GQGTPGDPEPVCVPIAVAESDTDDQEEDEENSLGTEEESSKQQESQPVSGGPEAPPDSRT 795
Query: 66 HRNRSSVNSRTMLAS 80
S+ S AS
Sbjct: 796 WSQVSATASSEAEAS 810
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 28.9 bits (63), Expect = 0.93
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 23 QEAEDVDELEDEEEGAETRGAGDPARYLSPGWGSASEEEPSRGHRNRSSVNSRTMLA 79
+E E+ +E E+EEE E A L P GS+SE R++ S T+LA
Sbjct: 755 EEEEEEEEEEEEEEEEEAAAAVALGEVLGPRSGSSSEGSERSTDRSQEGAPS-TLLA 810
>gi|100816397 MYST histone acetyltransferase (monocytic leukemia) 4
[Homo sapiens]
Length = 2073
Score = 28.9 bits (63), Expect = 0.93
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 23 QEAEDVDELEDEEEGAETRGAGDPARYLSPGWGSASEEEP 62
+E E+ +E E+EEEG E G G+ + G S +EEP
Sbjct: 1355 EEEEEEEEEEEEEEGEEEEGGGNVEKD-PDGAKSQEKEEP 1393
Score = 25.8 bits (55), Expect = 7.9
Identities = 20/73 (27%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 23 QEAEDVDELEDEEEGAETRGAGDPARYLSPGWGSASEEEP-----SRGHRNR---SSVNS 74
+E ++ +E E+EEE E P R P + + P RG + R SSV +
Sbjct: 1087 EEEDEEEEEEEEEEEEEENIQSSPPRLTKPQSVAIKRKRPFVLKKKRGRKRRRINSSVTT 1146
Query: 75 RTMLASFIVSSAP 87
T+ + V + P
Sbjct: 1147 ETISETTEVLNEP 1159
>gi|239755394 PREDICTED: hypothetical protein [Homo sapiens]
Length = 217
Score = 28.5 bits (62), Expect = 1.2
Identities = 22/94 (23%), Positives = 33/94 (35%), Gaps = 11/94 (11%)
Query: 5 GGEARPGPKTAVQIRVAIQEAEDVDELEDEEEG-----------AETRGAGDPARYLSPG 53
G + G + +R E+ +E EDE+ G A+ R A P R +
Sbjct: 45 GRACKEGRQRKSPLRTLRSNQEEQEEEEDEQNGRRHQPGRKQGRAQARPARSPLRPAATA 104
Query: 54 WGSASEEEPSRGHRNRSSVNSRTMLASFIVSSAP 87
E +G R SR + +S S P
Sbjct: 105 CKGDDRGERKKGRRGNPGTRSRRITSSLWASGRP 138
>gi|239744215 PREDICTED: hypothetical protein [Homo sapiens]
Length = 217
Score = 28.5 bits (62), Expect = 1.2
Identities = 22/94 (23%), Positives = 33/94 (35%), Gaps = 11/94 (11%)
Query: 5 GGEARPGPKTAVQIRVAIQEAEDVDELEDEEEG-----------AETRGAGDPARYLSPG 53
G + G + +R E+ +E EDE+ G A+ R A P R +
Sbjct: 45 GRACKEGRQRKSPLRTLRSNQEEQEEEEDEQNGRRHQPGRKQGRAQARPARSPLRPAATA 104
Query: 54 WGSASEEEPSRGHRNRSSVNSRTMLASFIVSSAP 87
E +G R SR + +S S P
Sbjct: 105 CKGDDRGERKKGRRGNPGTRSRRITSSLWASGRP 138
>gi|149363666 phosphodiesterase 4C isoform PDE4C-2 [Homo sapiens]
Length = 606
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 9 RPGPKTAVQIRVAIQEAEDVDELEDEEEGAET 40
R GP Q + ++EAE+ DE E+EEEG ET
Sbjct: 544 RDGPDR-FQFELTLEEAEEEDE-EEEEEGEET 573
>gi|149363646 phosphodiesterase 4C isoform PDE4C-3 [Homo sapiens]
Length = 680
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 9 RPGPKTAVQIRVAIQEAEDVDELEDEEEGAET 40
R GP Q + ++EAE+ DE E+EEEG ET
Sbjct: 618 RDGPDR-FQFELTLEEAEEEDE-EEEEEGEET 647
>gi|115529445 phosphodiesterase 4C isoform PDE4C-1 [Homo sapiens]
Length = 712
Score = 28.5 bits (62), Expect = 1.2
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 2/32 (6%)
Query: 9 RPGPKTAVQIRVAIQEAEDVDELEDEEEGAET 40
R GP Q + ++EAE+ DE E+EEEG ET
Sbjct: 650 RDGPDR-FQFELTLEEAEEEDE-EEEEEGEET 679
>gi|5729804 nudix-type motif 3 [Homo sapiens]
Length = 172
Score = 28.5 bits (62), Expect = 1.2
Identities = 14/32 (43%), Positives = 17/32 (53%)
Query: 32 EDEEEGAETRGAGDPARYLSPGWGSASEEEPS 63
E EEE + P R++ PG G EEEPS
Sbjct: 29 ESEEEVLLVSSSRHPDRWIVPGGGMEPEEEPS 60
>gi|122937267 lemur tyrosine kinase 3 [Homo sapiens]
Length = 1489
Score = 28.5 bits (62), Expect = 1.2
Identities = 19/56 (33%), Positives = 23/56 (41%), Gaps = 10/56 (17%)
Query: 3 QSGGEARPGPKTAVQIRVAIQEAEDVDELEDEEEGAETRGAGDPARYLSPGWGSAS 58
++GG PGP E + DE EDEEE E G A PG A+
Sbjct: 1293 EAGGAGAPGPA----------EEDGEDEDEDEEEDEEAAAPGAAAGPRGPGRARAA 1338
>gi|192807286 zinc finger and BTB domain containing 4 [Homo sapiens]
Length = 1013
Score = 28.5 bits (62), Expect = 1.2
Identities = 11/39 (28%), Positives = 24/39 (61%)
Query: 7 EARPGPKTAVQIRVAIQEAEDVDELEDEEEGAETRGAGD 45
+ RPG + ++ + ++ E+ DE E+EE+ E++ G+
Sbjct: 622 DLRPGELSGEEMEESEEDEEEEDEEEEEEDEEESKAGGE 660
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.303 0.121 0.332
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,276,291
Number of Sequences: 37866
Number of extensions: 204284
Number of successful extensions: 946
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 70
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 829
Number of HSP's gapped (non-prelim): 162
length of query: 93
length of database: 18,247,518
effective HSP length: 64
effective length of query: 29
effective length of database: 15,824,094
effective search space: 458898726
effective search space used: 458898726
T: 11
A: 40
X1: 17 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.