| Name: CCDC107 | Sequence: fasta or formatted (283aa) | NCBI GI: 28316810 | |
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Description: coiled-coil domain containing 107
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Referenced in:
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Composition:
Amino acid Percentage Count Longest homopolymer A alanine 10.2 29 2 C cysteine 1.1 3 1 D aspartate 4.2 12 1 E glutamate 9.5 27 3 F phenylalanine 1.8 5 1 G glycine 9.9 28 3 H histidine 2.5 7 1 I isoleucine 0.7 2 1 K lysine 3.9 11 1 L leucine 13.1 37 3 M methionine 1.4 4 1 N asparagine 2.5 7 2 P proline 5.7 16 2 Q glutamine 6.7 19 2 R arginine 5.3 15 3 S serine 7.8 22 1 T threonine 6.4 18 2 V valine 4.6 13 2 W tryptophan 2.1 6 1 Y tyrosine 0.7 2 1 |
Comparative genomics:
Search single species RefSeq proteins at NCBI
Search summary 
Figure data | ||
Related human proteins:Protein Relative score Description Self-match 1.000 coiled-coil domain containing 107 GOLGA8B 0.022 golgi autoantigen, golgin subfamily a, 8B GOLGA8A 0.022 golgi autoantigen, golgin subfamily a, 8A LOC100292334 0.022 PREDICTED: similar to GOLGA8B protein, partial [Hom... GOLGB1 0.022 golgi autoantigen, golgin subfamily b, macrogolgin ... ZNF853 0.018 zinc finger protein 853 CEP250 0.018 centrosomal protein 2 RIC3 0.018 resistance to inhibitors of cholinesterase 3 homolo... CCDC64B 0.017 coiled-coil domain containing 64B FAM9A 0.015 family with sequence similarity 9, member A LOC100291061 0.013 PREDICTED: hypothetical protein XP_002348193 LOC100287602 0.013 PREDICTED: hypothetical protein XP_002343855 KRT10 0.013 keratin 10 COL16A1 0.013 alpha 1 type XVI collagen precursor ZHX1 0.013 zinc fingers and homeoboxes 1 ZHX1 0.013 zinc fingers and homeoboxes 1 TBP 0.011 TATA box binding protein EFNB3 0.011 ephrin-B3 precursor EPS15 0.011 epidermal growth factor receptor pathway substrate ... EPS15 0.011 epidermal growth factor receptor pathway substrate 15... SEPN1 0.011 selenoprotein N, 1 isoform 1 precursor CROCC 0.011 ciliary rootlet coiled-coil PLEKHA5 0.011 pleckstrin homology domain containing, family A mem... LRRC36 0.009 leucine rich repeat containing 36 isoform 1 ANO8 0.009 anoctamin 8 XBP1 0.009 X-box binding protein 1 isoform XBP1(S) LRRC36 0.009 leucine rich repeat containing 36 isoform 2 SEPN1 0.009 selenoprotein N, 1 isoform 2 precursor FILIP1L 0.009 filamin A interacting protein 1-like isoform 3 [Hom... FILIP1L 0.009 filamin A interacting protein 1-like isoform 2 [Hom...Human BLASTP results (used to prepare the table) | |||
Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.
See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.
