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Search of human proteins with 36029914
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|36029914 valosin containing protein (p97)/p47 complex
interacting protein 1 [Homo sapiens]
(1222 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|36029914 valosin containing protein (p97)/p47 complex interac... 2480 0.0
gi|5454132 tumor necrosis factor, alpha-induced protein 3 [Homo ... 58 6e-08
gi|47132519 Ras association and pleckstrin homology domains 1 is... 50 1e-05
gi|13273315 homeobox B4 [Homo sapiens] 49 4e-05
gi|4557329 fas ligand [Homo sapiens] 48 7e-05
gi|169163027 PREDICTED: similar to Putative acrosin-like proteas... 48 7e-05
gi|40807465 zinc finger protein 341 [Homo sapiens] 48 7e-05
gi|150170670 piccolo isoform 2 [Homo sapiens] 47 9e-05
gi|150378539 piccolo isoform 1 [Homo sapiens] 47 9e-05
gi|122937496 WAS/WASL interacting protein family, member 3 [Homo... 47 9e-05
gi|52485606 formin-like 2 [Homo sapiens] 47 1e-04
gi|194294554 SET binding protein 1 isoform a [Homo sapiens] 47 1e-04
gi|122937271 WAS protein homolog associated with actin, golgi me... 47 1e-04
gi|56549694 enabled homolog isoform a [Homo sapiens] 46 2e-04
gi|39930375 enabled homolog isoform b [Homo sapiens] 46 2e-04
gi|126090663 zinc finger homeodomain 4 [Homo sapiens] 46 2e-04
gi|62751964 YOD1 OTU deubiquinating enzyme 1 homolog [Homo sapiens] 46 2e-04
gi|148613878 acrosin precursor [Homo sapiens] 45 3e-04
gi|120587019 zinc finger protein 318 [Homo sapiens] 45 3e-04
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 45 4e-04
gi|32307177 forkhead box G1 [Homo sapiens] 45 4e-04
gi|31543535 R3H domain containing 1 [Homo sapiens] 45 6e-04
gi|118026942 zinc finger protein Cezanne [Homo sapiens] 45 6e-04
gi|88703045 proline rich 11 [Homo sapiens] 45 6e-04
gi|156071470 hyperpolarization activated cyclic nucleotide-gated... 44 7e-04
gi|157277988 phosphodiesterase 4D isoform 1 [Homo sapiens] 44 7e-04
gi|39812378 RAN binding protein 9 [Homo sapiens] 44 7e-04
gi|118498345 AT-binding transcription factor 1 [Homo sapiens] 44 7e-04
gi|119120861 formin-like 3 isoform 2 [Homo sapiens] 44 7e-04
gi|119120874 formin-like 3 isoform 1 [Homo sapiens] 44 7e-04
>gi|36029914 valosin containing protein (p97)/p47 complex interacting
protein 1 [Homo sapiens]
Length = 1222
Score = 2480 bits (6427), Expect = 0.0
Identities = 1222/1222 (100%), Positives = 1222/1222 (100%)
Query: 1 MSQPPPPPPPLPPPPPPPEAPQTPSSLASAAASGGLLKRRDRRILSGSCPDPKCQARLFF 60
MSQPPPPPPPLPPPPPPPEAPQTPSSLASAAASGGLLKRRDRRILSGSCPDPKCQARLFF
Sbjct: 1 MSQPPPPPPPLPPPPPPPEAPQTPSSLASAAASGGLLKRRDRRILSGSCPDPKCQARLFF 60
Query: 61 PASGSVSIECTECGQRHEQQQLLGVEEVTDPDVVLHNLLRNALLGVTGAPKKNTELVKVM 120
PASGSVSIECTECGQRHEQQQLLGVEEVTDPDVVLHNLLRNALLGVTGAPKKNTELVKVM
Sbjct: 61 PASGSVSIECTECGQRHEQQQLLGVEEVTDPDVVLHNLLRNALLGVTGAPKKNTELVKVM 120
Query: 121 GLSNYHCKLLSPILARYGMDKQTGRAKLLRDMNQGELFDCALLGDRAFLIEPEHVNTVGY 180
GLSNYHCKLLSPILARYGMDKQTGRAKLLRDMNQGELFDCALLGDRAFLIEPEHVNTVGY
Sbjct: 121 GLSNYHCKLLSPILARYGMDKQTGRAKLLRDMNQGELFDCALLGDRAFLIEPEHVNTVGY 180
Query: 181 GKDRSGSLLYLHDTLEDIKRANKSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALRE 240
GKDRSGSLLYLHDTLEDIKRANKSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALRE
Sbjct: 181 GKDRSGSLLYLHDTLEDIKRANKSQECLIPVHVDGDGHCLVHAVSRALVGRELFWHALRE 240
Query: 241 NLKQHFQQHLARYQALFHDFIDAAEWEDIINECDPLFVPPEGVPLGLRNIHIFGLANVLH 300
NLKQHFQQHLARYQALFHDFIDAAEWEDIINECDPLFVPPEGVPLGLRNIHIFGLANVLH
Sbjct: 241 NLKQHFQQHLARYQALFHDFIDAAEWEDIINECDPLFVPPEGVPLGLRNIHIFGLANVLH 300
Query: 301 RPIILLDSLSGMRSSGDYSATFLPGLIPAEKCTGKDGHLNKPICIAWSSSGRNHYIPLVG 360
RPIILLDSLSGMRSSGDYSATFLPGLIPAEKCTGKDGHLNKPICIAWSSSGRNHYIPLVG
Sbjct: 301 RPIILLDSLSGMRSSGDYSATFLPGLIPAEKCTGKDGHLNKPICIAWSSSGRNHYIPLVG 360
Query: 361 IKGAALPKLPMNLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLLRLVAAMEEV 420
IKGAALPKLPMNLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLLRLVAAMEEV
Sbjct: 361 IKGAALPKLPMNLLPKAWGVPQDLIKKYIKLEEDGGCVIGGDRSLQDKYLLRLVAAMEEV 420
Query: 421 FMDKHGIHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHKCLLCGALSELHV 480
FMDKHGIHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHKCLLCGALSELHV
Sbjct: 421 FMDKHGIHPSLVADVHQYFYRRTGVIGVQPEEVTAAAKKAVMDNRLHKCLLCGALSELHV 480
Query: 481 PPEWLAPGGKLYNLAKSTHGQLRTDKNYSFPLNNLVCSYDSVKDVLVPDYGMSNLTACNW 540
PPEWLAPGGKLYNLAKSTHGQLRTDKNYSFPLNNLVCSYDSVKDVLVPDYGMSNLTACNW
Sbjct: 481 PPEWLAPGGKLYNLAKSTHGQLRTDKNYSFPLNNLVCSYDSVKDVLVPDYGMSNLTACNW 540
Query: 541 CHGTSVRKVRGDGSIVYLDGDRTNSRSTGGKCGCGFKHFWDGKEYDNLPEAFPITLEWGG 600
CHGTSVRKVRGDGSIVYLDGDRTNSRSTGGKCGCGFKHFWDGKEYDNLPEAFPITLEWGG
Sbjct: 541 CHGTSVRKVRGDGSIVYLDGDRTNSRSTGGKCGCGFKHFWDGKEYDNLPEAFPITLEWGG 600
Query: 601 RVVRETVYWFQYESDSSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVHTILHQTAKKNP 660
RVVRETVYWFQYESDSSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVHTILHQTAKKNP
Sbjct: 601 RVVRETVYWFQYESDSSLNSNVYDVAMKLVTKHFPGEFGSEILVQKVVHTILHQTAKKNP 660
Query: 661 DDYTPVNIDGAHAQRVGDVQGQESESQLPTKIILTGQKTKTLHKEELNMSKTERTIQQNI 720
DDYTPVNIDGAHAQRVGDVQGQESESQLPTKIILTGQKTKTLHKEELNMSKTERTIQQNI
Sbjct: 661 DDYTPVNIDGAHAQRVGDVQGQESESQLPTKIILTGQKTKTLHKEELNMSKTERTIQQNI 720
Query: 721 TEQASVMQKRKTEKLKQEQKGQPRTVSPSTIRDGPSSAPATPTKAPYSPTTSKEKKIRIT 780
TEQASVMQKRKTEKLKQEQKGQPRTVSPSTIRDGPSSAPATPTKAPYSPTTSKEKKIRIT
Sbjct: 721 TEQASVMQKRKTEKLKQEQKGQPRTVSPSTIRDGPSSAPATPTKAPYSPTTSKEKKIRIT 780
Query: 781 TNDGRQSMVTLKSSTTFFELQESIAREFNIPPYLQCIRYGFPPKELMPPQAGMEKEPVPL 840
TNDGRQSMVTLKSSTTFFELQESIAREFNIPPYLQCIRYGFPPKELMPPQAGMEKEPVPL
Sbjct: 781 TNDGRQSMVTLKSSTTFFELQESIAREFNIPPYLQCIRYGFPPKELMPPQAGMEKEPVPL 840
Query: 841 QHGDRITIEILKSKAEGGQSAAAHSAHTVKQEDIAVTGKLSSKELQEQAEKEMYSLCLLA 900
QHGDRITIEILKSKAEGGQSAAAHSAHTVKQEDIAVTGKLSSKELQEQAEKEMYSLCLLA
Sbjct: 841 QHGDRITIEILKSKAEGGQSAAAHSAHTVKQEDIAVTGKLSSKELQEQAEKEMYSLCLLA 900
Query: 901 TLMGEDVWSYAKGLPHMFQQGGVFYSIMKKTMGMADGKHCTFPHLPGKTFVYNASEDRLE 960
TLMGEDVWSYAKGLPHMFQQGGVFYSIMKKTMGMADGKHCTFPHLPGKTFVYNASEDRLE
Sbjct: 901 TLMGEDVWSYAKGLPHMFQQGGVFYSIMKKTMGMADGKHCTFPHLPGKTFVYNASEDRLE 960
Query: 961 LCVDAAGHFPIGPDVEDLVKEAVSQVRAEATTRSRESSPSHGLLKLGSGGVVKKKSEQLH 1020
LCVDAAGHFPIGPDVEDLVKEAVSQVRAEATTRSRESSPSHGLLKLGSGGVVKKKSEQLH
Sbjct: 961 LCVDAAGHFPIGPDVEDLVKEAVSQVRAEATTRSRESSPSHGLLKLGSGGVVKKKSEQLH 1020
Query: 1021 NVTAFQGKGHSLGTASGNPHLDPRARETSVVRKHNTGTDFSNSSTKTEPSVFTASSSNSE 1080
NVTAFQGKGHSLGTASGNPHLDPRARETSVVRKHNTGTDFSNSSTKTEPSVFTASSSNSE
Sbjct: 1021 NVTAFQGKGHSLGTASGNPHLDPRARETSVVRKHNTGTDFSNSSTKTEPSVFTASSSNSE 1080
Query: 1081 LIRIAPGVVTMRDGRQLDPDLVEAQRKKLQEMVSSIQASMDRHLRDQSTEQSPSDLPQRK 1140
LIRIAPGVVTMRDGRQLDPDLVEAQRKKLQEMVSSIQASMDRHLRDQSTEQSPSDLPQRK
Sbjct: 1081 LIRIAPGVVTMRDGRQLDPDLVEAQRKKLQEMVSSIQASMDRHLRDQSTEQSPSDLPQRK 1140
Query: 1141 TEVVSSSAKSGSLQTGLPESFPLTGGTENLNTETTDGCVADALGAAFATRSKAQRGNSVE 1200
TEVVSSSAKSGSLQTGLPESFPLTGGTENLNTETTDGCVADALGAAFATRSKAQRGNSVE
Sbjct: 1141 TEVVSSSAKSGSLQTGLPESFPLTGGTENLNTETTDGCVADALGAAFATRSKAQRGNSVE 1200
Query: 1201 ELEEMDSQDAEMTNTTEPMDHS 1222
ELEEMDSQDAEMTNTTEPMDHS
Sbjct: 1201 ELEEMDSQDAEMTNTTEPMDHS 1222
>gi|5454132 tumor necrosis factor, alpha-induced protein 3 [Homo
sapiens]
Length = 790
Score = 57.8 bits (138), Expect = 6e-08
Identities = 52/198 (26%), Positives = 91/198 (45%), Gaps = 38/198 (19%)
Query: 194 TLEDIKRANKSQEC--LIPVHVDGDGHCLVHAVSRALVG--------RELFWHALRENLK 243
TLE K+ N +E L+ + +GDG+CL+HA S+ + G R+ + L+E
Sbjct: 76 TLESQKKLNWCREVRKLVALKTNGDGNCLMHATSQYMWGVQDTDLVLRKALFSTLKETDT 135
Query: 244 QHFQQHLARYQALFHDFIDAA----------EWEDIINECDP-LFVPPEGVPLG-LRNIH 291
++F+ +F++ EW+++I + G+ L IH
Sbjct: 136 RNFKFRWQLESLKSQEFVETGLCYDTRNWNDEWDNLIKMASTDTPMARSGLQYNSLEEIH 195
Query: 292 IFGLANVLHRPIILLDS--LSGMRSSGDYS-----ATFLPGLIPAEKCTGKDGHLNKPIC 344
IF L N+L RPII++ L + S +++ +LP PA++C PI
Sbjct: 196 IFVLCNILRRPIIVISDKMLRSLESGSNFAPLKVGGIYLPLHWPAQEC------YRYPIV 249
Query: 345 IAWSSSGRNHYIPLVGIK 362
+ + S +H++PLV +K
Sbjct: 250 LGYDS---HHFVPLVTLK 264
>gi|47132519 Ras association and pleckstrin homology domains 1
isoform 1 [Homo sapiens]
Length = 1250
Score = 50.4 bits (119), Expect = 1e-05
Identities = 20/30 (66%), Positives = 21/30 (70%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLASAAAS 33
PPPPPPP PPPPPPP P PS A +A S
Sbjct: 630 PPPPPPPPPPPPPPPPPPPLPSQSAPSAGS 659
Score = 46.6 bits (109), Expect = 1e-04
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLASAAA 32
PPPPPPP PPPPPPP P + A +AA
Sbjct: 633 PPPPPPPPPPPPPPPPLPSQSAPSAGSAA 661
Score = 45.8 bits (107), Expect = 2e-04
Identities = 19/34 (55%), Positives = 21/34 (61%)
Query: 2 SQPPPPPPPLPPPPPPPEAPQTPSSLASAAASGG 35
S P PPPPP PPPPPPP P P + +A S G
Sbjct: 625 SPPLPPPPPPPPPPPPPPPPPPPPLPSQSAPSAG 658
Score = 41.6 bits (96), Expect = 0.005
Identities = 16/23 (69%), Positives = 16/23 (69%)
Query: 2 SQPPPPPPPLPPPPPPPEAPQTP 24
SQP PP PP PPPPPPP P P
Sbjct: 622 SQPSPPLPPPPPPPPPPPPPPPP 644
Score = 41.2 bits (95), Expect = 0.006
Identities = 16/26 (61%), Positives = 16/26 (61%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLAS 29
PPP P P PPPPPPP A TP S
Sbjct: 930 PPPSPVPAPPPPPPPTASPTPDKSGS 955
Score = 34.7 bits (78), Expect = 0.57
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 1 MSQPPPPPPPLPPPPPPPEAPQTP 24
++ P PPPPP P P PP+AP P
Sbjct: 758 VAPPTPPPPPPIPAPLPPQAPPKP 781
Score = 33.1 bits (74), Expect = 1.7
Identities = 16/37 (43%), Positives = 17/37 (45%), Gaps = 12/37 (32%)
Query: 2 SQPPPP------------PPPLPPPPPPPEAPQTPSS 26
S PPPP PP PPPPPP AP P +
Sbjct: 741 SAPPPPLKIHQVQHITQVAPPTPPPPPPIPAPLPPQA 777
Score = 33.1 bits (74), Expect = 1.7
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 1 MSQPPPPPPPLPPPPPPPEAPQTP 24
++Q PP PP PPP P P PQ P
Sbjct: 755 ITQVAPPTPPPPPPIPAPLPPQAP 778
Score = 32.7 bits (73), Expect = 2.2
Identities = 15/29 (51%), Positives = 15/29 (51%), Gaps = 8/29 (27%)
Query: 4 PPPPPPPLPPPP--------PPPEAPQTP 24
PPPPPPP PP P P P AP P
Sbjct: 710 PPPPPPPPPPTPGSAMAQLKPAPCAPSLP 738
Score = 32.7 bits (73), Expect = 2.2
Identities = 19/60 (31%), Positives = 24/60 (40%), Gaps = 6/60 (10%)
Query: 4 PPPP------PPPLPPPPPPPEAPQTPSSLASAAASGGLLKRRDRRILSGSCPDPKCQAR 57
PPPP PPP P P P P P P++ + SG K+ + G P R
Sbjct: 918 PPPPESSLVFPPPPPSPVPAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQR 977
Score = 32.7 bits (73), Expect = 2.2
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 8/58 (13%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLASAAASGGLLK-----RRDRRILSGS---CPDPK 53
P PPPPP P P P+ +P S +S G K +R+ I S S P+PK
Sbjct: 936 PAPPPPPPPTASPTPDKSGSPGKKTSKTSSPGGKKPPPTPQRNSSIKSSSGAEHPEPK 993
Score = 32.0 bits (71), Expect = 3.7
Identities = 12/20 (60%), Positives = 13/20 (65%)
Query: 7 PPPPLPPPPPPPEAPQTPSS 26
PP + PPPPPP P TP S
Sbjct: 704 PPNGVVPPPPPPPPPPTPGS 723
Score = 31.6 bits (70), Expect = 4.8
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 6 PPPPPLPPPPPPPEAPQTPSSLA 28
PP +PPPPPPP P S++A
Sbjct: 704 PPNGVVPPPPPPPPPPTPGSAMA 726
Score = 30.8 bits (68), Expect = 8.2
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 7 PPPPLPPPPPPPEAPQTPSSLASAAAS 33
PPPP PPPPP P + A A S
Sbjct: 710 PPPPPPPPPPTPGSAMAQLKPAPCAPS 736
>gi|13273315 homeobox B4 [Homo sapiens]
Length = 251
Score = 48.5 bits (114), Expect = 4e-05
Identities = 25/61 (40%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLASAAASGGLLKRRDRR--ILSGSCPDPKCQARLFFP 61
PPPPPPP PPPPPP +P+ P + +G LL +R +S S P P C P
Sbjct: 74 PPPPPPPPPPPPPPGLSPRAP----APPPAGALLPEPGQRCEAVSSSPPPPPCAQNPLHP 129
Query: 62 A 62
+
Sbjct: 130 S 130
>gi|4557329 fas ligand [Homo sapiens]
Length = 281
Score = 47.8 bits (112), Expect = 7e-05
Identities = 17/21 (80%), Positives = 17/21 (80%)
Query: 4 PPPPPPPLPPPPPPPEAPQTP 24
PPPPPPPLPPPPPPP P P
Sbjct: 47 PPPPPPPLPPPPPPPPLPPLP 67
Score = 37.0 bits (84), Expect = 0.12
Identities = 14/21 (66%), Positives = 14/21 (66%)
Query: 4 PPPPPPPLPPPPPPPEAPQTP 24
PPPP PP PPPPP P P P
Sbjct: 50 PPPPLPPPPPPPPLPPLPLPP 70
Score = 35.4 bits (80), Expect = 0.33
Identities = 15/23 (65%), Positives = 15/23 (65%), Gaps = 1/23 (4%)
Query: 3 QPPPPPPPLPPP-PPPPEAPQTP 24
Q PPPPP PPP PPPP P P
Sbjct: 42 QRRPPPPPPPPPLPPPPPPPPLP 64
>gi|169163027 PREDICTED: similar to Putative acrosin-like protease
[Homo sapiens]
Length = 355
Score = 47.8 bits (112), Expect = 7e-05
Identities = 21/41 (51%), Positives = 22/41 (53%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLASAAASGGLLKRRDRRI 44
PPPPPPP P PPPPP P TPSS KR + I
Sbjct: 286 PPPPPPPSPLPPPPPPPPPTPSSTTKLPQGLSFAKRLQQLI 326
Score = 33.5 bits (75), Expect = 1.3
Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 3/26 (11%)
Query: 5 PPPPP---PLPPPPPPPEAPQTPSSL 27
PP PP P PPP PPP P PS L
Sbjct: 270 PPRPPAAQPRPPPSPPPPPPPPPSPL 295
Score = 32.3 bits (72), Expect = 2.8
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 10/32 (31%)
Query: 3 QPPPPP-PPLPP---------PPPPPEAPQTP 24
QPPP P PP PP PPPPP P +P
Sbjct: 263 QPPPRPLPPRPPAAQPRPPPSPPPPPPPPPSP 294
>gi|40807465 zinc finger protein 341 [Homo sapiens]
Length = 847
Score = 47.8 bits (112), Expect = 7e-05
Identities = 18/24 (75%), Positives = 18/24 (75%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSL 27
PPPPPPPLPPPPPP P P SL
Sbjct: 181 PPPPPPPLPPPPPPQPPPPPPQSL 204
Score = 35.8 bits (81), Expect = 0.26
Identities = 13/21 (61%), Positives = 15/21 (71%)
Query: 4 PPPPPPPLPPPPPPPEAPQTP 24
P PPPPP PPPPPP++ P
Sbjct: 187 PLPPPPPPQPPPPPPQSLGPP 207
>gi|150170670 piccolo isoform 2 [Homo sapiens]
Length = 4935
Score = 47.4 bits (111), Expect = 9e-05
Identities = 17/23 (73%), Positives = 18/23 (78%)
Query: 2 SQPPPPPPPLPPPPPPPEAPQTP 24
+QPPPPPPP PPPPPPP P P
Sbjct: 2403 AQPPPPPPPPPPPPPPPPPPPPP 2425
Score = 45.1 bits (105), Expect = 4e-04
Identities = 16/21 (76%), Positives = 16/21 (76%)
Query: 4 PPPPPPPLPPPPPPPEAPQTP 24
PPPPPPP PPPPPPP P P
Sbjct: 2406 PPPPPPPPPPPPPPPPPPPPP 2426
Score = 45.1 bits (105), Expect = 4e-04
Identities = 16/21 (76%), Positives = 16/21 (76%)
Query: 4 PPPPPPPLPPPPPPPEAPQTP 24
PPPPPPP PPPPPPP P P
Sbjct: 2408 PPPPPPPPPPPPPPPPPPPLP 2428
Score = 44.7 bits (104), Expect = 6e-04
Identities = 16/21 (76%), Positives = 16/21 (76%)
Query: 4 PPPPPPPLPPPPPPPEAPQTP 24
PPPPPPP PPPPPPP P P
Sbjct: 2409 PPPPPPPPPPPPPPPPPPLPP 2429
Score = 44.3 bits (103), Expect = 7e-04
Identities = 17/27 (62%), Positives = 18/27 (66%)
Query: 1 MSQPPPPPPPLPPPPPPPEAPQTPSSL 27
+S PPPPPP PPPPPPP P P L
Sbjct: 2401 ISAQPPPPPPPPPPPPPPPPPPPPPPL 2427
Score = 43.9 bits (102), Expect = 0.001
Identities = 16/20 (80%), Positives = 16/20 (80%)
Query: 4 PPPPPPPLPPPPPPPEAPQT 23
PPPPPPP PPPPPPP P T
Sbjct: 2412 PPPPPPPPPPPPPPPLPPPT 2431
Score = 43.5 bits (101), Expect = 0.001
Identities = 16/22 (72%), Positives = 16/22 (72%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPS 25
PPPPPPP PPPPPPP P S
Sbjct: 2411 PPPPPPPPPPPPPPPPLPPPTS 2432
Score = 43.1 bits (100), Expect = 0.002
Identities = 16/23 (69%), Positives = 17/23 (73%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSS 26
PPPPPPP PPPPPPP P+S
Sbjct: 2410 PPPPPPPPPPPPPPPPPLPPPTS 2432
Score = 42.0 bits (97), Expect = 0.004
Identities = 15/21 (71%), Positives = 16/21 (76%)
Query: 4 PPPPPPPLPPPPPPPEAPQTP 24
PPPPPPP PPPPPP P +P
Sbjct: 2413 PPPPPPPPPPPPPPLPPPTSP 2433
Score = 40.4 bits (93), Expect = 0.010
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 4 PPPPPPPLPPPPPPPEAPQ 22
PPPPPPP PPP PPP +P+
Sbjct: 2416 PPPPPPPPPPPLPPPTSPK 2434
Score = 33.1 bits (74), Expect = 1.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLASAAA 32
PPPPPPP PPP P+ P + A+
Sbjct: 2419 PPPPPPPPLPPPTSPKPTILPKKKLTVAS 2447
Score = 31.6 bits (70), Expect = 4.8
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 683 ESESQLPT--KIILTGQKTKTLHKEEL-----NMSKTERTIQQNITEQASVMQKRKTEKL 735
E S +PT K IL G K + +E +++K E T+ + QAS + K+EK
Sbjct: 1376 EIPSLIPTDEKDILKGLKKDSFSQESSPSSPSDLAKLESTVLSILEAQASTLADEKSEK- 1434
Query: 736 KQEQKGQPRTVSPSTIRD 753
K QP VSP +D
Sbjct: 1435 ----KTQPHEVSPEQPKD 1448
>gi|150378539 piccolo isoform 1 [Homo sapiens]
Length = 5142
Score = 47.4 bits (111), Expect = 9e-05
Identities = 17/23 (73%), Positives = 18/23 (78%)
Query: 2 SQPPPPPPPLPPPPPPPEAPQTP 24
+QPPPPPPP PPPPPPP P P
Sbjct: 2403 AQPPPPPPPPPPPPPPPPPPPPP 2425
Score = 45.1 bits (105), Expect = 4e-04
Identities = 16/21 (76%), Positives = 16/21 (76%)
Query: 4 PPPPPPPLPPPPPPPEAPQTP 24
PPPPPPP PPPPPPP P P
Sbjct: 2406 PPPPPPPPPPPPPPPPPPPPP 2426
Score = 45.1 bits (105), Expect = 4e-04
Identities = 16/21 (76%), Positives = 16/21 (76%)
Query: 4 PPPPPPPLPPPPPPPEAPQTP 24
PPPPPPP PPPPPPP P P
Sbjct: 2408 PPPPPPPPPPPPPPPPPPPLP 2428
Score = 44.7 bits (104), Expect = 6e-04
Identities = 16/21 (76%), Positives = 16/21 (76%)
Query: 4 PPPPPPPLPPPPPPPEAPQTP 24
PPPPPPP PPPPPPP P P
Sbjct: 2409 PPPPPPPPPPPPPPPPPPLPP 2429
Score = 44.3 bits (103), Expect = 7e-04
Identities = 17/27 (62%), Positives = 18/27 (66%)
Query: 1 MSQPPPPPPPLPPPPPPPEAPQTPSSL 27
+S PPPPPP PPPPPPP P P L
Sbjct: 2401 ISAQPPPPPPPPPPPPPPPPPPPPPPL 2427
Score = 43.9 bits (102), Expect = 0.001
Identities = 16/20 (80%), Positives = 16/20 (80%)
Query: 4 PPPPPPPLPPPPPPPEAPQT 23
PPPPPPP PPPPPPP P T
Sbjct: 2412 PPPPPPPPPPPPPPPLPPPT 2431
Score = 43.5 bits (101), Expect = 0.001
Identities = 16/22 (72%), Positives = 16/22 (72%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPS 25
PPPPPPP PPPPPPP P S
Sbjct: 2411 PPPPPPPPPPPPPPPPLPPPTS 2432
Score = 43.1 bits (100), Expect = 0.002
Identities = 16/23 (69%), Positives = 17/23 (73%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSS 26
PPPPPPP PPPPPPP P+S
Sbjct: 2410 PPPPPPPPPPPPPPPPPLPPPTS 2432
Score = 42.0 bits (97), Expect = 0.004
Identities = 15/21 (71%), Positives = 16/21 (76%)
Query: 4 PPPPPPPLPPPPPPPEAPQTP 24
PPPPPPP PPPPPP P +P
Sbjct: 2413 PPPPPPPPPPPPPPLPPPTSP 2433
Score = 40.4 bits (93), Expect = 0.010
Identities = 14/19 (73%), Positives = 16/19 (84%)
Query: 4 PPPPPPPLPPPPPPPEAPQ 22
PPPPPPP PPP PPP +P+
Sbjct: 2416 PPPPPPPPPPPLPPPTSPK 2434
Score = 33.1 bits (74), Expect = 1.7
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLASAAA 32
PPPPPPP PPP P+ P + A+
Sbjct: 2419 PPPPPPPPLPPPTSPKPTILPKKKLTVAS 2447
Score = 31.6 bits (70), Expect = 4.8
Identities = 26/78 (33%), Positives = 37/78 (47%), Gaps = 12/78 (15%)
Query: 683 ESESQLPT--KIILTGQKTKTLHKEEL-----NMSKTERTIQQNITEQASVMQKRKTEKL 735
E S +PT K IL G K + +E +++K E T+ + QAS + K+EK
Sbjct: 1376 EIPSLIPTDEKDILKGLKKDSFSQESSPSSPSDLAKLESTVLSILEAQASTLADEKSEK- 1434
Query: 736 KQEQKGQPRTVSPSTIRD 753
K QP VSP +D
Sbjct: 1435 ----KTQPHEVSPEQPKD 1448
>gi|122937496 WAS/WASL interacting protein family, member 3 [Homo
sapiens]
Length = 483
Score = 47.4 bits (111), Expect = 9e-05
Identities = 26/59 (44%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
Query: 1 MSQPPPPPPPLPPPPPPPEA-PQTPSSLASAAASGGLLKRRDRRILSGSCPDPKCQARL 58
M PPPPPPPLPPPPPP A P P S + L+R D + S D + RL
Sbjct: 1 MPVPPPPPPPLPPPPPPLGAPPPPPPSAPPVSTDTSSLRRADPKGRSALLADIQQGTRL 59
Score = 42.4 bits (98), Expect = 0.003
Identities = 16/22 (72%), Positives = 16/22 (72%)
Query: 5 PPPPPPLPPPPPPPEAPQTPSS 26
P PPPP PPPPPPP P PSS
Sbjct: 172 PAPPPPTPPPPPPPLPPPLPSS 193
Score = 37.4 bits (85), Expect = 0.088
Identities = 16/35 (45%), Positives = 18/35 (51%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLASAAASGGLLK 38
PPP PPP PPP PPP +P + G L K
Sbjct: 175 PPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTK 209
Score = 37.0 bits (84), Expect = 0.12
Identities = 16/47 (34%), Positives = 23/47 (48%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLASAAASGGLLKRRDRRILSGSCP 50
PPPP PP PPPP PP P + + G L + + +++ P
Sbjct: 174 PPPPTPPPPPPPLPPPLPSSSPIKTPLVSPPGPLTKGNLPVVAPPVP 220
Score = 37.0 bits (84), Expect = 0.12
Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 2/31 (6%)
Query: 4 PPPP--PPPLPPPPPPPEAPQTPSSLASAAA 32
PP P PPP PPPPPP P P+S+ S A
Sbjct: 217 PPVPCAPPPPPPPPPPTPPPLPPASVLSDKA 247
Score = 35.0 bits (79), Expect = 0.44
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 1 MSQPPPPPPPLPPPPPPPEAPQTP 24
++ P P PP PPPPPPP P P
Sbjct: 215 VAPPVPCAPPPPPPPPPPTPPPLP 238
Score = 34.7 bits (78), Expect = 0.57
Identities = 14/23 (60%), Positives = 14/23 (60%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSS 26
P PPPP PPPPPP P SS
Sbjct: 172 PAPPPPTPPPPPPPLPPPLPSSS 194
Score = 33.5 bits (75), Expect = 1.3
Identities = 15/29 (51%), Positives = 17/29 (58%), Gaps = 1/29 (3%)
Query: 4 PPPPPPPLPPPP-PPPEAPQTPSSLASAA 31
PP P P PPPP PPP P P L S++
Sbjct: 166 PPRPNVPAPPPPTPPPPPPPLPPPLPSSS 194
Score = 32.0 bits (71), Expect = 3.7
Identities = 19/54 (35%), Positives = 23/54 (42%), Gaps = 22/54 (40%)
Query: 3 QPPPPPPPLPP------------PP----------PPPEAPQTPSSLASAAASG 34
+PP PPPPLPP PP PPP P++PS A +G
Sbjct: 288 EPPAPPPPLPPYASCSPRASLPAPPLPGVNSSSETPPPLPPKSPSFQAPPQKAG 341
>gi|52485606 formin-like 2 [Homo sapiens]
Length = 1092
Score = 47.0 bits (110), Expect = 1e-04
Identities = 18/28 (64%), Positives = 18/28 (64%)
Query: 1 MSQPPPPPPPLPPPPPPPEAPQTPSSLA 28
M PPPPPPP PPPPPPP P P A
Sbjct: 552 MPPPPPPPPPPPPPPPPPPPPPLPGPAA 579
Score = 45.1 bits (105), Expect = 4e-04
Identities = 18/32 (56%), Positives = 20/32 (62%)
Query: 1 MSQPPPPPPPLPPPPPPPEAPQTPSSLASAAA 32
++ P PPPPP PPPPPPP P P L AA
Sbjct: 548 VTPPMPPPPPPPPPPPPPPPPPPPPPLPGPAA 579
Score = 37.4 bits (85), Expect = 0.088
Identities = 14/20 (70%), Positives = 15/20 (75%)
Query: 4 PPPPPPPLPPPPPPPEAPQT 23
PPPPPPP PPPP P A +T
Sbjct: 562 PPPPPPPPPPPPLPGPAAET 581
Score = 37.4 bits (85), Expect = 0.088
Identities = 14/22 (63%), Positives = 15/22 (68%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPS 25
PPPPPPP PPP P P A P+
Sbjct: 563 PPPPPPPPPPPLPGPAAETVPA 584
Score = 36.6 bits (83), Expect = 0.15
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 18/41 (43%)
Query: 4 PPPPPPPLPPPPPP------------------PEAPQTPSS 26
PPPPPPP PPPPPP P AP P +
Sbjct: 560 PPPPPPPPPPPPPPLPGPAAETVPAPPLAPPLPSAPPLPGT 600
Score = 36.2 bits (82), Expect = 0.20
Identities = 16/38 (42%), Positives = 17/38 (44%), Gaps = 17/38 (44%)
Query: 4 PPPPP-----------------PPLPPPPPPPEAPQTP 24
PPPPP PP+PPPPPPP P P
Sbjct: 528 PPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPPPP 565
Score = 35.0 bits (79), Expect = 0.44
Identities = 13/21 (61%), Positives = 13/21 (61%)
Query: 4 PPPPPPPLPPPPPPPEAPQTP 24
P PP P PPPPPPP P P
Sbjct: 547 PVTPPMPPPPPPPPPPPPPPP 567
Score = 34.3 bits (77), Expect = 0.75
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 17/37 (45%)
Query: 5 PPPPPPLPP-----------------PPPPPEAPQTP 24
PPPPPPLPP PPPPP P P
Sbjct: 527 PPPPPPLPPSSDTPETVQNGPVTPPMPPPPPPPPPPP 563
>gi|194294554 SET binding protein 1 isoform a [Homo sapiens]
Length = 1596
Score = 47.0 bits (110), Expect = 1e-04
Identities = 17/21 (80%), Positives = 17/21 (80%)
Query: 4 PPPPPPPLPPPPPPPEAPQTP 24
PPPPPPPLPPPPPPP P P
Sbjct: 1523 PPPPPPPLPPPPPPPLPPPPP 1543
Score = 43.5 bits (101), Expect = 0.001
Identities = 15/19 (78%), Positives = 17/19 (89%)
Query: 4 PPPPPPPLPPPPPPPEAPQ 22
PPPPPPPLPPPPP P+ P+
Sbjct: 1531 PPPPPPPLPPPPPLPKTPR 1549
Score = 38.9 bits (89), Expect = 0.030
Identities = 17/37 (45%), Positives = 18/37 (48%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLASAAASGGLLKRR 40
PP PPPP PP PPPP P P GG K +
Sbjct: 1520 PPLPPPPPPPLPPPPPPPLPPPPPLPKTPRGGKRKHK 1556
>gi|122937271 WAS protein homolog associated with actin, golgi
membranes and microtubules [Homo sapiens]
Length = 809
Score = 47.0 bits (110), Expect = 1e-04
Identities = 18/31 (58%), Positives = 23/31 (74%)
Query: 1 MSQPPPPPPPLPPPPPPPEAPQTPSSLASAA 31
+S PPPPPPP PPPPPPP P +L+S++
Sbjct: 636 LSLPPPPPPPPPPPPPPPPPPPPLRALSSSS 666
Score = 46.6 bits (109), Expect = 1e-04
Identities = 19/30 (63%), Positives = 21/30 (70%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLASAAAS 33
PPPPPPP PPPPPPP P S +S AA+
Sbjct: 641 PPPPPPPPPPPPPPPPPPLRALSSSSQAAT 670
Score = 44.7 bits (104), Expect = 6e-04
Identities = 19/33 (57%), Positives = 21/33 (63%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLASAAASGGL 36
PPPPPPP PPPPPPP + SS + AA L
Sbjct: 642 PPPPPPPPPPPPPPPPPLRALSSSSQAATHQNL 674
Score = 44.3 bits (103), Expect = 7e-04
Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLASAAAS 33
PPPPPPP PPPPPPP P + +S+ A+
Sbjct: 640 PPPPPPPPPPPPPPPPPPPLRALSSSSQAA 669
Score = 43.1 bits (100), Expect = 0.002
Identities = 16/28 (57%), Positives = 19/28 (67%)
Query: 5 PPPPPPLPPPPPPPEAPQTPSSLASAAA 32
PPPPPP PPPPPPP P P S+++
Sbjct: 639 PPPPPPPPPPPPPPPPPPPPLRALSSSS 666
>gi|56549694 enabled homolog isoform a [Homo sapiens]
Length = 591
Score = 45.8 bits (107), Expect = 2e-04
Identities = 19/27 (70%), Positives = 20/27 (74%), Gaps = 4/27 (14%)
Query: 4 PPPPPPPLP----PPPPPPEAPQTPSS 26
PPPPPPPLP PPPPPP AP P+S
Sbjct: 349 PPPPPPPLPNQVPPPPPPPPAPPLPAS 375
Score = 37.7 bits (86), Expect = 0.067
Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Query: 5 PPPPPPLPP--PPPPPEAPQTPSSL 27
PPPPPPLP PPPPP P P+ +
Sbjct: 336 PPPPPPLPSTGPPPPPPPPPLPNQV 360
Score = 37.4 bits (85), Expect = 0.088
Identities = 16/26 (61%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Query: 4 PPPPPP-----PLPPPPPPPEAPQTP 24
PPPPPP P PPPPPPP Q P
Sbjct: 336 PPPPPPLPSTGPPPPPPPPPLPNQVP 361
Score = 37.0 bits (84), Expect = 0.12
Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 7/32 (21%)
Query: 5 PPPPPPLPPPP-------PPPEAPQTPSSLAS 29
PPPPPPLPP P PPP P P L S
Sbjct: 313 PPPPPPLPPGPAQASVALPPPPGPPPPPPLPS 344
Score = 35.4 bits (80), Expect = 0.33
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 9/35 (25%)
Query: 1 MSQPPPPPPP---------LPPPPPPPEAPQTPSS 26
++ PPPPP P LPPPP PP P PS+
Sbjct: 311 LAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPST 345
Score = 32.7 bits (73), Expect = 2.2
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 5/25 (20%)
Query: 5 PPPPPPLPPPP-----PPPEAPQTP 24
PPPP P PPPP PPP P P
Sbjct: 331 PPPPGPPPPPPLPSTGPPPPPPPPP 355
>gi|39930375 enabled homolog isoform b [Homo sapiens]
Length = 570
Score = 45.8 bits (107), Expect = 2e-04
Identities = 19/27 (70%), Positives = 20/27 (74%), Gaps = 4/27 (14%)
Query: 4 PPPPPPPLP----PPPPPPEAPQTPSS 26
PPPPPPPLP PPPPPP AP P+S
Sbjct: 349 PPPPPPPLPNQVPPPPPPPPAPPLPAS 375
Score = 37.7 bits (86), Expect = 0.067
Identities = 15/25 (60%), Positives = 17/25 (68%), Gaps = 2/25 (8%)
Query: 5 PPPPPPLPP--PPPPPEAPQTPSSL 27
PPPPPPLP PPPPP P P+ +
Sbjct: 336 PPPPPPLPSTGPPPPPPPPPLPNQV 360
Score = 37.4 bits (85), Expect = 0.088
Identities = 16/26 (61%), Positives = 16/26 (61%), Gaps = 5/26 (19%)
Query: 4 PPPPPP-----PLPPPPPPPEAPQTP 24
PPPPPP P PPPPPPP Q P
Sbjct: 336 PPPPPPLPSTGPPPPPPPPPLPNQVP 361
Score = 37.0 bits (84), Expect = 0.12
Identities = 17/32 (53%), Positives = 17/32 (53%), Gaps = 7/32 (21%)
Query: 5 PPPPPPLPPPP-------PPPEAPQTPSSLAS 29
PPPPPPLPP P PPP P P L S
Sbjct: 313 PPPPPPLPPGPAQASVALPPPPGPPPPPPLPS 344
Score = 35.4 bits (80), Expect = 0.33
Identities = 16/35 (45%), Positives = 19/35 (54%), Gaps = 9/35 (25%)
Query: 1 MSQPPPPPPP---------LPPPPPPPEAPQTPSS 26
++ PPPPP P LPPPP PP P PS+
Sbjct: 311 LAPPPPPPLPPGPAQASVALPPPPGPPPPPPLPST 345
Score = 32.7 bits (73), Expect = 2.2
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 5/25 (20%)
Query: 5 PPPPPPLPPPP-----PPPEAPQTP 24
PPPP P PPPP PPP P P
Sbjct: 331 PPPPGPPPPPPLPSTGPPPPPPPPP 355
>gi|126090663 zinc finger homeodomain 4 [Homo sapiens]
Length = 3571
Score = 45.8 bits (107), Expect = 2e-04
Identities = 16/21 (76%), Positives = 16/21 (76%)
Query: 4 PPPPPPPLPPPPPPPEAPQTP 24
PPPPPPP PPPPPPP P P
Sbjct: 1999 PPPPPPPPPPPPPPPPPPSAP 2019
Score = 44.3 bits (103), Expect = 7e-04
Identities = 16/22 (72%), Positives = 17/22 (77%)
Query: 5 PPPPPPLPPPPPPPEAPQTPSS 26
PPPPPP PPPPPPP P PS+
Sbjct: 1997 PPPPPPPPPPPPPPPPPPPPSA 2018
Score = 43.1 bits (100), Expect = 0.002
Identities = 16/23 (69%), Positives = 16/23 (69%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSS 26
P PPPPP PPPPPPP P P S
Sbjct: 1995 PTPPPPPPPPPPPPPPPPPPPPS 2017
Score = 43.1 bits (100), Expect = 0.002
Identities = 20/27 (74%), Positives = 20/27 (74%), Gaps = 4/27 (14%)
Query: 4 PPPPPPPLPPPPPPPEAP---QTPSSL 27
PPPPPPP PPPPPPP AP Q P SL
Sbjct: 2003 PPPPPPP-PPPPPPPSAPPQVQLPVSL 2028
Score = 42.4 bits (98), Expect = 0.003
Identities = 15/24 (62%), Positives = 16/24 (66%)
Query: 1 MSQPPPPPPPLPPPPPPPEAPQTP 24
+ PPP PPP PPPPPPP P P
Sbjct: 1990 LQAPPPTPPPPPPPPPPPPPPPPP 2013
Score = 42.0 bits (97), Expect = 0.004
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 15/111 (13%)
Query: 3 QPPPPPPPLPPPPPPPEAPQTPSSLASAAASGGLLKRRDRRILSGSCPDP------KCQA 56
Q PPP PP PPPPPPP P P SA L D + P Q
Sbjct: 1991 QAPPPTPPPPPPPPPPPPPPPPPPPPSAPPQVQLPVSLDLPLFPSIMMQPVQHPALPPQL 2050
Query: 57 RLFFPASGSVSIECTECGQRHEQQQLLGVEEVTDPDVVLHNLLRNALLGVT 107
L P ++S + T+ QQ LG+ DP+ + H+ + +T
Sbjct: 2051 ALQLPQMDALSADLTQL-----CQQQLGL----DPNFLRHSQFKRPRTRIT 2092
Score = 38.9 bits (89), Expect = 0.030
Identities = 17/26 (65%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 2 SQPPPPPPPLPPPPPPPEAPQTPSSL 27
S P PPPP PPPPP P AP PSS+
Sbjct: 1953 SSPETPPPP-PPPPPLPPAPPQPSSM 1977
Score = 37.4 bits (85), Expect = 0.088
Identities = 14/24 (58%), Positives = 15/24 (62%)
Query: 1 MSQPPPPPPPLPPPPPPPEAPQTP 24
+S P PPP PPPPPPP P P
Sbjct: 1986 VSTPLQAPPPTPPPPPPPPPPPPP 2009
Score = 34.7 bits (78), Expect = 0.57
Identities = 12/14 (85%), Positives = 12/14 (85%)
Query: 3 QPPPPPPPLPPPPP 16
Q PPPPPP PPPPP
Sbjct: 3115 QTPPPPPPPPPPPP 3128
Score = 33.5 bits (75), Expect = 1.3
Identities = 11/15 (73%), Positives = 12/15 (80%)
Query: 1 MSQPPPPPPPLPPPP 15
+ PPPPPPP PPPP
Sbjct: 3114 LQTPPPPPPPPPPPP 3128
Score = 32.0 bits (71), Expect = 3.7
Identities = 14/27 (51%), Positives = 15/27 (55%)
Query: 2 SQPPPPPPPLPPPPPPPEAPQTPSSLA 28
S P P PPPPPPP P SSL+
Sbjct: 3107 SAPTKPLLQTPPPPPPPPPPPPSSSLS 3133
Score = 31.6 bits (70), Expect = 4.8
Identities = 12/20 (60%), Positives = 12/20 (60%)
Query: 4 PPPPPPPLPPPPPPPEAPQT 23
PPPPPPP PPP QT
Sbjct: 3118 PPPPPPPPPPPSSSLSGQQT 3137
Score = 31.2 bits (69), Expect = 6.3
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 1 MSQPPPPPPPLPPPPPPPEAPQTPSSLAS 29
+S P P PPPPPP P PSS S
Sbjct: 3105 LSSAPTKPLLQTPPPPPPPPPPPPSSSLS 3133
Score = 30.8 bits (68), Expect = 8.2
Identities = 12/25 (48%), Positives = 13/25 (52%)
Query: 5 PPPPPPLPPPPPPPEAPQTPSSLAS 29
P P PPPPPPP P P +S
Sbjct: 1952 PSSPETPPPPPPPPPLPPAPPQPSS 1976
>gi|62751964 YOD1 OTU deubiquinating enzyme 1 homolog [Homo sapiens]
Length = 348
Score = 45.8 bits (107), Expect = 2e-04
Identities = 41/143 (28%), Positives = 58/143 (40%), Gaps = 6/143 (4%)
Query: 740 KGQPRTVSPSTIRDGPSSAPATPTKA------PYSPTTSKEKKIRITTNDGRQSMVTLKS 793
KG+ V P+ G S A TKA P T ++R DG + L S
Sbjct: 6 KGRHFGVHPAPGFPGGVSQQAAGTKAGPAGAWPVGSRTDTMWRLRCKAKDGTHVLQGLSS 65
Query: 794 STTFFELQESIAREFNIPPYLQCIRYGFPPKELMPPQAGMEKEPVPLQHGDRITIEILKS 853
T ELQ IA I P Q I G+PP+ L E +P+Q GD + IE ++
Sbjct: 66 RTRVRELQGQIAAITGIAPGGQRILVGYPPECLDLSNGDTILEDLPIQSGDMLIIEEDQT 125
Query: 854 KAEGGQSAAAHSAHTVKQEDIAV 876
+ + A + +E + V
Sbjct: 126 RPRSSPAFTKRGASSYVRETLPV 148
>gi|148613878 acrosin precursor [Homo sapiens]
Length = 421
Score = 45.4 bits (106), Expect = 3e-04
Identities = 22/44 (50%), Positives = 23/44 (52%), Gaps = 1/44 (2%)
Query: 2 SQPPPPPPPLPP-PPPPPEAPQTPSSLASAAASGGLLKRRDRRI 44
S PPPPPPP P PPPPP P TPSS KR + I
Sbjct: 349 SPPPPPPPPASPLPPPPPPPPPTPSSTTKLPQGLSFAKRLQQLI 392
Score = 37.7 bits (86), Expect = 0.067
Identities = 15/23 (65%), Positives = 17/23 (73%), Gaps = 1/23 (4%)
Query: 2 SQPPPPPPPLPPPPPPPEAPQTP 24
+QP PPP P PPPPPPP +P P
Sbjct: 342 AQPRPPPSP-PPPPPPPASPLPP 363
Score = 32.3 bits (72), Expect = 2.8
Identities = 16/32 (50%), Positives = 17/32 (53%), Gaps = 10/32 (31%)
Query: 3 QPPPPP-PPLPP---------PPPPPEAPQTP 24
QPPP P PP PP PPPPP P +P
Sbjct: 329 QPPPRPLPPRPPAAQPRPPPSPPPPPPPPASP 360
>gi|120587019 zinc finger protein 318 [Homo sapiens]
Length = 2279
Score = 45.4 bits (106), Expect = 3e-04
Identities = 20/43 (46%), Positives = 28/43 (65%), Gaps = 1/43 (2%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLASAAASGGLLKRRDRRILS 46
PPPPPPP PPPPPPP P P++ ++A A+ L + ++S
Sbjct: 1442 PPPPPPPPPPPPPPPVIPH-PAAPSAAQANAILAPVKSNPVVS 1483
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 45.1 bits (105), Expect = 4e-04
Identities = 19/37 (51%), Positives = 24/37 (64%), Gaps = 2/37 (5%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLASAAASGGLLKRR 40
PPPPPPPLPPPPPPP P + ++ G+ KR+
Sbjct: 76 PPPPPPPLPPPPPPP--PPDKDDIRLLPSALGVKKRK 110
Score = 40.8 bits (94), Expect = 0.008
Identities = 19/46 (41%), Positives = 24/46 (52%), Gaps = 6/46 (13%)
Query: 4 PPPPPPPLPPPPPPPEAPQ------TPSSLASAAASGGLLKRRDRR 43
PPPPPPP PPPPPP P PS+L G K+++ +
Sbjct: 75 PPPPPPPPLPPPPPPPPPDKDDIRLLPSALGVKKRKRGPKKQKENK 120
>gi|32307177 forkhead box G1 [Homo sapiens]
Length = 489
Score = 45.1 bits (105), Expect = 4e-04
Identities = 18/30 (60%), Positives = 20/30 (66%)
Query: 3 QPPPPPPPLPPPPPPPEAPQTPSSLASAAA 32
QPPPPP PPPPPP APQ P + + AA
Sbjct: 64 QPPPPPQQQQPPPPPPPAPQPPQTRGAPAA 93
Score = 34.7 bits (78), Expect = 0.57
Identities = 21/55 (38%), Positives = 23/55 (41%), Gaps = 27/55 (49%)
Query: 3 QPPPPPPP-----------------------LPPPPPPPEAPQTPSSLASAAASG 34
QPPPPPPP LPPPPPPP A ++L A A G
Sbjct: 73 QPPPPPPPAPQPPQTRGAPAADDDKGPQQLLLPPPPPPPPA----AALDGAKADG 123
>gi|31543535 R3H domain containing 1 [Homo sapiens]
Length = 1099
Score = 44.7 bits (104), Expect = 6e-04
Identities = 19/31 (61%), Positives = 19/31 (61%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLASAAASG 34
P PPPPP PPPPPPP P P A ASG
Sbjct: 591 PHPPPPPPPPPPPPPLPPGQPVPTAGYPASG 621
Score = 40.0 bits (92), Expect = 0.014
Identities = 15/24 (62%), Positives = 16/24 (66%)
Query: 1 MSQPPPPPPPLPPPPPPPEAPQTP 24
M+ PPP PP PPPPPPP P P
Sbjct: 585 MTAAPPPHPPPPPPPPPPPPPLPP 608
>gi|118026942 zinc finger protein Cezanne [Homo sapiens]
Length = 843
Score = 44.7 bits (104), Expect = 6e-04
Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 47/193 (24%)
Query: 208 LIPVHVDGDGHCLVHAVS--------RALVGRELFWHALRENLKQHFQQHLARYQ----- 254
L+P+ GDG+CL+HA S R L+ R+ + + + +++ + R+Q
Sbjct: 183 LLPLATTGDGNCLLHAASLGMWGFHDRDLMLRKALYALMEKGVEKEALKRRWRWQQTQQN 242
Query: 255 ----ALFHDFIDAAEWEDIIN---------------ECDPLFVPPEGVPLGLRNIHIFGL 295
++ + EW ++I C + E V L H+F L
Sbjct: 243 KESGLVYTEDEWQKEWNELIKLASSEPRMHLGTNGANCGGVESSEEPVYESLEEFHVFVL 302
Query: 296 ANVLHRPIILLDSLSGMRSSGD------YSATFLPGLIPAEKCTGKDGHLNKPICIAWSS 349
A+VL RPI+++ S G+ + +LP +PA +C P+ +A+
Sbjct: 303 AHVLRRPIVVVADTMLRDSGGEAFAPIPFGGIYLPLEVPASQCH------RSPLVLAYDQ 356
Query: 350 SGRNHYIPLVGIK 362
+ H+ LV ++
Sbjct: 357 A---HFSALVSME 366
>gi|88703045 proline rich 11 [Homo sapiens]
Length = 360
Score = 44.7 bits (104), Expect = 6e-04
Identities = 23/37 (62%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Query: 4 PPPPPPPLPPPPPP--PEAPQTPSSLASAAASGGLLK 38
PPPPPPPLPPPPPP P + P SLA A +G L K
Sbjct: 186 PPPPPPPLPPPPPPLAPVLLRKP-SLAKALQAGPLKK 221
Score = 33.1 bits (74), Expect = 1.7
Identities = 13/24 (54%), Positives = 13/24 (54%)
Query: 5 PPPPPPLPPPPPPPEAPQTPSSLA 28
P P PPPPPPP P P LA
Sbjct: 178 PQPASHFPPPPPPPPLPPPPPPLA 201
>gi|156071470 hyperpolarization activated cyclic nucleotide-gated
potassium channel 2 [Homo sapiens]
Length = 889
Score = 44.3 bits (103), Expect = 7e-04
Identities = 30/72 (41%), Positives = 32/72 (44%), Gaps = 7/72 (9%)
Query: 3 QPPPPPPPLPPPPPPPEAPQTPSSLAS----AAASGGLLKRRDRRILSGSCPDPKCQARL 58
QPPPPPPP PPP P P PQ P + AA GG R R SC P
Sbjct: 34 QPPPPPPPAPPPGPGPAPPQHPPRAEALPPEAADEGG--PRGRLRSRDSSCGRPGTPGAA 91
Query: 59 FFPASGSVSIEC 70
A GS + EC
Sbjct: 92 -STAKGSPNGEC 102
Score = 40.0 bits (92), Expect = 0.014
Identities = 16/22 (72%), Positives = 16/22 (72%), Gaps = 4/22 (18%)
Query: 4 PPPPPPPLPP----PPPPPEAP 21
PPPPPPP PP PPPPP AP
Sbjct: 22 PPPPPPPAPPQQQPPPPPPPAP 43
Score = 33.9 bits (76), Expect = 0.97
Identities = 14/31 (45%), Positives = 15/31 (48%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLASAAASG 34
P P PPP PPP PP + P P A G
Sbjct: 18 PAPGPPPPPPPAPPQQQPPPPPPPAPPPGPG 48
Score = 32.0 bits (71), Expect = 3.7
Identities = 12/19 (63%), Positives = 12/19 (63%)
Query: 4 PPPPPPPLPPPPPPPEAPQ 22
P P P PPPPPPP PQ
Sbjct: 14 PGATPAPGPPPPPPPAPPQ 32
Score = 30.8 bits (68), Expect = 8.2
Identities = 17/39 (43%), Positives = 20/39 (51%), Gaps = 5/39 (12%)
Query: 3 QPPPPPPPL---PPPPPPPEAPQTPSSLASAAAS--GGL 36
+PPP P P P PPPP P P+S + S GGL
Sbjct: 760 RPPPGPAPAAASPGPPPPASPPGAPASPRAPRTSPYGGL 798
>gi|157277988 phosphodiesterase 4D isoform 1 [Homo sapiens]
Length = 809
Score = 44.3 bits (103), Expect = 7e-04
Identities = 20/35 (57%), Positives = 24/35 (68%), Gaps = 2/35 (5%)
Query: 5 PPPPPPLPPPPPPPEAPQTPSSLASAAASGGLLKR 39
PPPPPPLPPPPPPP A + AS+ A+G + R
Sbjct: 75 PPPPPPLPPPPPPPGAAR--GRYASSGATGRVRHR 107
Score = 33.1 bits (74), Expect = 1.7
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 11/48 (22%)
Query: 4 PPPP-----------PPPLPPPPPPPEAPQTPSSLASAAASGGLLKRR 40
PPPP PPP PP PPPP P +++ + G ++ R
Sbjct: 60 PPPPSPQPQPQCPLQPPPPPPLPPPPPPPGAARGRYASSGATGRVRHR 107
>gi|39812378 RAN binding protein 9 [Homo sapiens]
Length = 729
Score = 44.3 bits (103), Expect = 7e-04
Identities = 18/31 (58%), Positives = 20/31 (64%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLASAAASG 34
PPPPPPP PPPP P P + A+A ASG
Sbjct: 71 PPPPPPPATAAPPPPPPPPPPPASAAAPASG 101
Score = 38.9 bits (89), Expect = 0.030
Identities = 20/44 (45%), Positives = 21/44 (47%), Gaps = 12/44 (27%)
Query: 4 PPPPP----PPLPPPPPPPEA--------PQTPSSLASAAASGG 35
PPPPP PP PPPPPPP A P P LA+ G
Sbjct: 73 PPPPPATAAPPPPPPPPPPPASAAAPASGPPAPPGLAAGPGPAG 116
Score = 31.6 bits (70), Expect = 4.8
Identities = 13/32 (40%), Positives = 14/32 (43%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLASAAASGG 35
PPPPPPP P P P A +GG
Sbjct: 86 PPPPPPPASAAAPASGPPAPPGLAAGPGPAGG 117
>gi|118498345 AT-binding transcription factor 1 [Homo sapiens]
Length = 3703
Score = 44.3 bits (103), Expect = 7e-04
Identities = 18/29 (62%), Positives = 20/29 (68%)
Query: 5 PPPPPPLPPPPPPPEAPQTPSSLASAAAS 33
PPPPPP PPPPP P AP P+S + AS
Sbjct: 2039 PPPPPPPPPPPPLPAAPPQPASTPAIPAS 2067
Score = 40.4 bits (93), Expect = 0.010
Identities = 18/30 (60%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 3 QPPPPPPPLPPPPPPPEAPQTPSSLASAAA 32
Q P PPPP PPPPPPP P P AS A
Sbjct: 2035 QTPEPPPP-PPPPPPPPLPAAPPQPASTPA 2063
Score = 38.9 bits (89), Expect = 0.030
Identities = 16/27 (59%), Positives = 18/27 (66%)
Query: 4 PPPPPPPLPPPPPPPEAPQTPSSLASA 30
PPPPPPP P P PP+ TP+ ASA
Sbjct: 2042 PPPPPPPPPLPAAPPQPASTPAIPASA 2068
>gi|119120861 formin-like 3 isoform 2 [Homo sapiens]
Length = 976
Score = 44.3 bits (103), Expect = 7e-04
Identities = 20/38 (52%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Query: 4 PPPPPPPLPPPPPP-----PEAPQTPSSLASAAASGGL 36
PPPP PPLPPPPPP P AP P + S + GL
Sbjct: 468 PPPPAPPLPPPPPPLPDKCPPAPPLPGAAPSVVLTVGL 505
Score = 32.3 bits (72), Expect = 2.8
Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 4/24 (16%)
Query: 5 PPPPP----PLPPPPPPPEAPQTP 24
P PPP PLPPPP PP P P
Sbjct: 457 PAPPPEEVLPLPPPPAPPLPPPPP 480
>gi|119120874 formin-like 3 isoform 1 [Homo sapiens]
Length = 1027
Score = 44.3 bits (103), Expect = 7e-04
Identities = 20/38 (52%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Query: 4 PPPPPPPLPPPPPP-----PEAPQTPSSLASAAASGGL 36
PPPP PPLPPPPPP P AP P + S + GL
Sbjct: 519 PPPPAPPLPPPPPPLPDKCPPAPPLPGAAPSVVLTVGL 556
Score = 32.3 bits (72), Expect = 2.8
Identities = 14/24 (58%), Positives = 14/24 (58%), Gaps = 4/24 (16%)
Query: 5 PPPPP----PLPPPPPPPEAPQTP 24
P PPP PLPPPP PP P P
Sbjct: 508 PAPPPEEVLPLPPPPAPPLPPPPP 531
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.133 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 52,916,891
Number of Sequences: 37866
Number of extensions: 2738921
Number of successful extensions: 48874
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 237
Number of HSP's that attempted gapping in prelim test: 29596
Number of HSP's gapped (non-prelim): 12193
length of query: 1222
length of database: 18,247,518
effective HSP length: 114
effective length of query: 1108
effective length of database: 13,930,794
effective search space: 15435319752
effective search space used: 15435319752
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 68 (30.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.