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Search of human proteins with 34577087
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|34577087 ring finger protein 13 [Homo sapiens]
(381 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|34577087 ring finger protein 13 [Homo sapiens] 767 0.0
gi|6005864 ring finger protein 13 [Homo sapiens] 767 0.0
gi|14149702 ring finger protein 167 [Homo sapiens] 329 2e-90
gi|150170725 zinc and ring finger 4 [Homo sapiens] 214 1e-55
gi|58331204 ring finger protein 150 [Homo sapiens] 99 5e-21
gi|29788758 ring finger protein 130 [Homo sapiens] 97 2e-20
gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens] 90 3e-18
gi|21040269 ring finger protein 133 [Homo sapiens] 88 1e-17
gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens] 85 1e-16
gi|150378447 zinc and ring finger 3 [Homo sapiens] 83 4e-16
gi|37675277 ring finger protein 148 [Homo sapiens] 82 6e-16
gi|29789407 ring finger protein 149 [Homo sapiens] 82 8e-16
gi|34452686 ring finger protein, LIM domain interacting [Homo sa... 79 7e-15
gi|34452684 ring finger protein, LIM domain interacting [Homo sa... 79 7e-15
gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens] 70 4e-12
gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens] 70 4e-12
gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens] 70 4e-12
gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens] 70 4e-12
gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens] 70 4e-12
gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens] 67 2e-11
gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens] 67 2e-11
gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens] 67 2e-11
gi|7662486 ring finger protein 44 [Homo sapiens] 67 3e-11
gi|56711322 ring finger protein 43 [Homo sapiens] 64 2e-10
gi|5174653 ring finger protein 6 [Homo sapiens] 63 5e-10
gi|34305295 ring finger protein 6 [Homo sapiens] 63 5e-10
gi|34305293 ring finger protein 6 [Homo sapiens] 63 5e-10
gi|63025220 ring finger protein 215 [Homo sapiens] 61 2e-09
gi|57165361 ring finger protein 165 [Homo sapiens] 60 2e-09
gi|38045931 ring finger protein 122 [Homo sapiens] 60 3e-09
>gi|34577087 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 767 bits (1981), Expect = 0.0
Identities = 381/381 (100%), Positives = 381/381 (100%)
Query: 1 MLLSIGMLMLSATQVYTILTVQLFAFLNLLPVEADILAYNFENASQTFDDLPARFGYRLP 60
MLLSIGMLMLSATQVYTILTVQLFAFLNLLPVEADILAYNFENASQTFDDLPARFGYRLP
Sbjct: 1 MLLSIGMLMLSATQVYTILTVQLFAFLNLLPVEADILAYNFENASQTFDDLPARFGYRLP 60
Query: 61 AEGLKGFLINSKPENACEPIVPPPVKDNSSGTFIVLIRRLDCNFDIKVLNAQRAGYKAAI 120
AEGLKGFLINSKPENACEPIVPPPVKDNSSGTFIVLIRRLDCNFDIKVLNAQRAGYKAAI
Sbjct: 61 AEGLKGFLINSKPENACEPIVPPPVKDNSSGTFIVLIRRLDCNFDIKVLNAQRAGYKAAI 120
Query: 121 VHNVDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFTYEKGGHLILVPEFSLPL 180
VHNVDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFTYEKGGHLILVPEFSLPL
Sbjct: 121 VHNVDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFTYEKGGHLILVPEFSLPL 180
Query: 181 EYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVC 240
EYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVC
Sbjct: 181 EYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVC 240
Query: 241 AICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQ 300
AICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQ
Sbjct: 241 AICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQ 300
Query: 301 EENEVTEHTPLLRPLASVSAQSFGALSESRSHQNMTESSDYEEDDNEDTDSSDAENEINE 360
EENEVTEHTPLLRPLASVSAQSFGALSESRSHQNMTESSDYEEDDNEDTDSSDAENEINE
Sbjct: 301 EENEVTEHTPLLRPLASVSAQSFGALSESRSHQNMTESSDYEEDDNEDTDSSDAENEINE 360
Query: 361 HDVVVQLQPNGERDYNIANTV 381
HDVVVQLQPNGERDYNIANTV
Sbjct: 361 HDVVVQLQPNGERDYNIANTV 381
>gi|6005864 ring finger protein 13 [Homo sapiens]
Length = 381
Score = 767 bits (1981), Expect = 0.0
Identities = 381/381 (100%), Positives = 381/381 (100%)
Query: 1 MLLSIGMLMLSATQVYTILTVQLFAFLNLLPVEADILAYNFENASQTFDDLPARFGYRLP 60
MLLSIGMLMLSATQVYTILTVQLFAFLNLLPVEADILAYNFENASQTFDDLPARFGYRLP
Sbjct: 1 MLLSIGMLMLSATQVYTILTVQLFAFLNLLPVEADILAYNFENASQTFDDLPARFGYRLP 60
Query: 61 AEGLKGFLINSKPENACEPIVPPPVKDNSSGTFIVLIRRLDCNFDIKVLNAQRAGYKAAI 120
AEGLKGFLINSKPENACEPIVPPPVKDNSSGTFIVLIRRLDCNFDIKVLNAQRAGYKAAI
Sbjct: 61 AEGLKGFLINSKPENACEPIVPPPVKDNSSGTFIVLIRRLDCNFDIKVLNAQRAGYKAAI 120
Query: 121 VHNVDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFTYEKGGHLILVPEFSLPL 180
VHNVDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFTYEKGGHLILVPEFSLPL
Sbjct: 121 VHNVDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFTYEKGGHLILVPEFSLPL 180
Query: 181 EYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVC 240
EYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVC
Sbjct: 181 EYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVC 240
Query: 241 AICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQ 300
AICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQ
Sbjct: 241 AICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQ 300
Query: 301 EENEVTEHTPLLRPLASVSAQSFGALSESRSHQNMTESSDYEEDDNEDTDSSDAENEINE 360
EENEVTEHTPLLRPLASVSAQSFGALSESRSHQNMTESSDYEEDDNEDTDSSDAENEINE
Sbjct: 301 EENEVTEHTPLLRPLASVSAQSFGALSESRSHQNMTESSDYEEDDNEDTDSSDAENEINE 360
Query: 361 HDVVVQLQPNGERDYNIANTV 381
HDVVVQLQPNGERDYNIANTV
Sbjct: 361 HDVVVQLQPNGERDYNIANTV 381
>gi|14149702 ring finger protein 167 [Homo sapiens]
Length = 350
Score = 329 bits (844), Expect = 2e-90
Identities = 163/306 (53%), Positives = 215/306 (70%), Gaps = 10/306 (3%)
Query: 31 PVEADILAYNFENASQTFDDLPARFGYRLPAEGLKGFLINSKPENACEPIVPPPVKDNSS 90
P I A + NAS F DLPA FG L EGL+GFL+ + P+NAC PI PPP +
Sbjct: 21 PTRGLIRATSDHNASMDFADLPALFGATLSQEGLQGFLVEAHPDNACSPIAPPPPAPVNG 80
Query: 91 GTFIVLIRRLDCNFDIKVLNAQRAGYKAAIVHNVDSDDLISMGSNDIEVLKKIDIPSVFI 150
FI L+RR DCNFD+KVLNAQ+AGY AA+VHNV+S++L++M N E+ ++I IPSVFI
Sbjct: 81 SVFIALLRRFDCNFDLKVLNAQKAGYGAAVVHNVNSNELLNMVWNSEEIQQQIWIPSVFI 140
Query: 151 GESSANSLKDEFTYEKGGHLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDR 210
GE S+ L+ F YEKG ++LVP+ + PL YYLIPF IVG+ ++ + MI + +Q R
Sbjct: 141 GERSSEYLRALFVYEKGARVLLVPDNTFPLGYYLIPFTGIVGLLVLAMGAVMIARCIQHR 200
Query: 211 HRARRNRLRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPW 270
R +RNRL K+QLK++P H ++KGD+YDVCAICLDEYEDGDKLR+LPC+HAYH +CVDPW
Sbjct: 201 KRLQRNRLTKEQLKQIPTHDYQKGDQYDVCAICLDEYEDGDKLRVLPCAHAYHSRCVDPW 260
Query: 271 LTKTKKTCPVCKQKVVPSQGDSDSDTDS-SQEENE--------VTEHTPLLRPLASVSAQ 321
LT+T+KTCP+CKQ V GD D + ++ QEE + +E TPLL ++
Sbjct: 261 LTQTRKTCPICKQPVHRGPGDEDQEEETQGQEEGDEGEPRDHPASERTPLLGSSPTLPT- 319
Query: 322 SFGALS 327
SFG+L+
Sbjct: 320 SFGSLA 325
>gi|150170725 zinc and ring finger 4 [Homo sapiens]
Length = 429
Score = 214 bits (545), Expect = 1e-55
Identities = 129/321 (40%), Positives = 188/321 (58%), Gaps = 28/321 (8%)
Query: 18 ILTVQLFAFLNLL--PVEADILAYNFENASQT-FDDLPARFGYRLPAEGLKGFLINSKPE 74
++ V+ L+LL P +A + A +N+S F DLPA FG L EG++G+L+ KP
Sbjct: 80 LVAVKALLVLSLLQVPAQAVVRAVLEDNSSSVDFADLPALFGVPLAPEGIRGYLMEVKPA 139
Query: 75 NACEPIVPPPVKDNSSGTFIVLIRRLDCNFDIKVLNAQRAGYKAAIVHNVDSDDLISMGS 134
NAC PI P + + S G IVLIRR DC FD+KVLNAQRAG++AAIVHNV SDDL+SM
Sbjct: 140 NACHPIEAPRLGNRSLGA-IVLIRRYDCTFDLKVLNAQRAGFEAAIVHNVHSDDLVSMTH 198
Query: 135 NDIEVLKKIDIPSVFIGESSANSLKDEFTYEKGGHLILVPEFSLPLEYYLIPFLI---IV 191
++ +I IPSVF+ E+++ L+ K H +L+P+ + P L ++
Sbjct: 199 VYEDLRGQIAIPSVFVSEAASQDLRVILGCNKSAHALLLPDDPPCHDLGCHPVLTVSWVL 258
Query: 192 GICLILIV--IFMITKF-------VQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVCAI 242
G L L+V F++ R + + +K Q++ H D+CAI
Sbjct: 259 GCTLALVVSAFFVLNHLWLWAQACCSHRRPVKTSTCQKAQVRTFTWHN-------DLCAI 311
Query: 243 CLDEYEDGDKLRILPCSHAYHCKCVDPWLTKT-KKTCPVCKQKVVPSQGDSDSDTDSSQE 301
CLDEYE+GD+L+ILPCSH YHCKC+DPW ++ +++CPVCKQ V ++ DS T S ++
Sbjct: 312 CLDEYEEGDQLKILPCSHTYHCKCIDPWFSQAPRRSCPVCKQSVAATEDSFDSTTYSFRD 371
Query: 302 EN-EVTEHTPLLRPLASVSAQ 321
E+ + H P P+ ++ Q
Sbjct: 372 EDPSLPGHRP---PIWAIQVQ 389
>gi|58331204 ring finger protein 150 [Homo sapiens]
Length = 438
Score = 99.4 bits (246), Expect = 5e-21
Identities = 73/255 (28%), Positives = 123/255 (48%), Gaps = 21/255 (8%)
Query: 54 RFGYRLPAEGLKGFLINSKPEN---ACEPIVPPPVKDNSSGTFIVLIRRLDCNFDIKVLN 110
R+G P + +G ++ + + AC+P +I LI + +C + K+ N
Sbjct: 76 RYGEHSPKQDARGEVVMASSAHDRLACDPNTKFAAPTRGKN-WIALIPKGNCTYRDKIRN 134
Query: 111 AQRAGYKAAIVHNVDSD--DLISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFT---YE 165
A A ++ NV S+ + I+M +E + I IP G+ + L+ T Y
Sbjct: 135 AFLQNASAVVIFNVGSNTNETITMPHAGVEDIVAIMIPEPK-GKEIVSLLERNITVTMYI 193
Query: 166 KGGHLILVPEFS-LPLEYYLIPFLIIVGICLILIVIFMITKF----VQDRHRARRNRLRK 220
G L S + + I F++++ I L +V + I +F +DR++ R K
Sbjct: 194 TIGTRNLQKYVSRTSVVFVSISFIVLMIISLAWLVFYYIQRFRYANARDRNQRRLGDAAK 253
Query: 221 DQLKKLPVHKFKKGD-----EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTK 275
+ KL + KKGD ++D CA+C++ Y+ D +RILPC H +H CVDPWL
Sbjct: 254 KAISKLQIRTIKKGDKETESDFDNCAVCIEGYKPNDVVRILPCRHLFHKSCVDPWLL-DH 312
Query: 276 KTCPVCKQKVVPSQG 290
+TCP+CK ++ + G
Sbjct: 313 RTCPMCKMNILKALG 327
>gi|29788758 ring finger protein 130 [Homo sapiens]
Length = 419
Score = 97.1 bits (240), Expect = 2e-20
Identities = 71/270 (26%), Positives = 123/270 (45%), Gaps = 29/270 (10%)
Query: 44 ASQTFDDLPARFGYRLPAEGLKGFLINSKPENA------CEP----IVPPPVKDNSSGTF 93
A TF R+G P ++G ++ P + C+P VPP +K +
Sbjct: 50 APLTFRIDRGRYGLDSPKAEVRGQVLAPLPLHGVADHLGCDPQTRFFVPPNIKQ-----W 104
Query: 94 IVLIRRLDCNFDIKVLNAQRAGYKAAIVHNVDSDD----LISMGSNDIEVLKKIDIPSVF 149
I L++R +C F K+ A A +++N S + + G+ DI + ++
Sbjct: 105 IALLQRGNCTFKEKISRAAFHNAVAVVIYNNKSKEEPVTMTHPGTGDIIAVMITELRGKD 164
Query: 150 IGESSANSLKDEFTYEKGGHLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKF--- 206
I ++ + T G + L + I F++++ I ++ + I K
Sbjct: 165 ILSYLEKNISVQMTIAVGTRMPPKNFSRGSLVFVSISFIVLMIISSAWLIFYFIQKIRYT 224
Query: 207 -VQDRHRARRNRLRKDQLKKLPVHKFKKGD-----EYDVCAICLDEYEDGDKLRILPCSH 260
+DR++ R K + KL KKGD ++D CA+C++ Y+ D +RILPC H
Sbjct: 225 NARDRNQRRLGDAAKKAISKLTTRTVKKGDKETDPDFDHCAVCIESYKQNDVVRILPCKH 284
Query: 261 AYHCKCVDPWLTKTKKTCPVCKQKVVPSQG 290
+H CVDPWL++ TCP+CK ++ + G
Sbjct: 285 VFHKSCVDPWLSE-HCTCPMCKLNILKALG 313
>gi|37588871 ring finger protein 128 isoform 2 [Homo sapiens]
Length = 402
Score = 90.1 bits (222), Expect = 3e-18
Identities = 72/300 (24%), Positives = 130/300 (43%), Gaps = 41/300 (13%)
Query: 88 NSSGTFIVLIRRLDCNFDIKVLNAQRAGYKAAIVHNVDSDDLISMGSNDIEVLK--KIDI 145
N+ +I LI R +C F K+ A R A +++N G+ I++ +DI
Sbjct: 86 NTKKPWIALIERGNCTFSEKIQTAGRRNADAVVIYNAPET-----GNQTIQMANFGAVDI 140
Query: 146 PSVFIGESSANSLKDEFTYEKGGHLILVPEFS---------LPLEYYLIPFLIIVGICLI 196
++ IG + ++G + +V E + + + F II +
Sbjct: 141 VAIMIGNLKGTKILQSI--QRGIQVTMVIEVGKKHGPWVNHYSIFFVSVSFFIITAATVG 198
Query: 197 LIVIFMITKFVQDRHRARRNRLRKDQLKK----LPVHKFKKGDEY-----DVCAICLDEY 247
+ + + R ++R+ R K KK L + K+GD+ D CA+C++ Y
Sbjct: 199 YFIFYSARRLRNARAQSRKQRQLKADAKKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELY 258
Query: 248 EDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTE 307
+ D +RIL C+H +H CVDPWL + +TCP+CK ++ + G + E+ V+
Sbjct: 259 KPNDLVRILTCNHIFHKTCVDPWLLE-HRTCPMCKCDILKALG-----IEVDVEDGSVSL 312
Query: 308 HTPLLRPLASVSAQSFGALSESRSHQNMTESSDYEEDDNEDTDSSDAENEINEHDVVVQL 367
P+ +++ A S +++ T SS Y + TD E + + +QL
Sbjct: 313 QVPVSNEISN------SASSHEEDNRSETASSGYA--SVQGTDEPPLEEHVQSTNESLQL 364
>gi|21040269 ring finger protein 133 [Homo sapiens]
Length = 376
Score = 88.2 bits (217), Expect = 1e-17
Identities = 85/331 (25%), Positives = 137/331 (41%), Gaps = 44/331 (13%)
Query: 56 GYRLPAEGLKGFLINSKPENACEPIVPPPVKDNSSGTFIVLIRRLDCNFDIKVLNAQRAG 115
G +P EG K +NAC P + S T++ LI R C F K+ A G
Sbjct: 73 GVIVPPEG--------KIQNACNPNTIFS-RSKYSETWLALIERGGCTFTQKIKVATEKG 123
Query: 116 YKAAIVHNVDS--DDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFTYEKGGHLILV 173
I++NV + + M E D+ V IG + F K G LI
Sbjct: 124 ASGVIIYNVPGTGNQVFPMFHQAFE-----DVVVVMIGNLKGTEI---FHLIKKGVLITA 175
Query: 174 P-----EFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARR-NRLRKD---QLK 224
+ + + +YL+ F+I+ L + + I + R + RR RL D
Sbjct: 176 VVEVGRKHIIWMNHYLVSFVIVTTATLAYFIFYHIHRLCLARIQNRRWQRLTTDLQNTFG 235
Query: 225 KLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCP 279
+L + K+GDE D C IC + Y+ D +RIL C H +H C+DPW+ TCP
Sbjct: 236 QLQLRVVKEGDEEINPNGDSCVICFERYKPNDIVRILTCKHFFHKNCIDPWIL-PHGTCP 294
Query: 280 VCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASVSAQSFGALSESRSHQNMTESS 339
+CK ++ G + V T L+ L S + SE ++ ++ +
Sbjct: 295 ICKCDILKVLG----------IQVVVENGTEPLQVLMSNELPETLSPSEEETNNEVSPAG 344
Query: 340 DYEEDDNEDTDSSDAENEINEHDVVVQLQPN 370
++ + + + + N+I H VV + P+
Sbjct: 345 TSDKVIHVEENPTSQNNDIQPHSVVEDVHPS 375
>gi|37588873 ring finger protein 128 isoform 1 [Homo sapiens]
Length = 428
Score = 84.7 bits (208), Expect = 1e-16
Identities = 84/336 (25%), Positives = 145/336 (43%), Gaps = 39/336 (11%)
Query: 55 FGYRLPAEGLKGFLINSKPE---NACEP----IVPPPVKDNSSGTFIVLIRRLD-CNFDI 106
+G P E + G L+ NAC P VP +++ LI+R C F
Sbjct: 71 YGQDSPLEPVAGVLVPPDGPGALNACNPHTNFTVPTVWGSTVQVSWLALIQRGGGCTFAD 130
Query: 107 KVLNAQRAGYKAAIVHNVDS--DDLISM---GSNDIEVLKKIDIPSVFIGESSANSLKDE 161
K+ A G A++ N +++I M G+ DI + ++ I +S ++
Sbjct: 131 KIHLAYERGASGAVIFNFPGTRNEVIPMSHPGAVDIVAIMIGNLKGTKILQSIQRGIQVT 190
Query: 162 FTYEKGG-HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRK 220
E G H V +S+ + + F II + + + + R ++R+ R K
Sbjct: 191 MVIEVGKKHGPWVNHYSI--FFVSVSFFIITAATVGYFIFYSARRLRNARAQSRKQRQLK 248
Query: 221 DQLKK----LPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWL 271
KK L + K+GD+ D CA+C++ Y+ D +RIL C+H +H CVDPWL
Sbjct: 249 ADAKKAIGRLQLRTLKQGDKEIGPDGDSCAVCIELYKPNDLVRILTCNHIFHKTCVDPWL 308
Query: 272 TKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASVSAQSFGALSESRS 331
+ +TCP+CK ++ + G + E+ V+ P+ +++ A S
Sbjct: 309 LE-HRTCPMCKCDILKALG-----IEVDVEDGSVSLQVPVSNEISN------SASSHEED 356
Query: 332 HQNMTESSDYEEDDNEDTDSSDAENEINEHDVVVQL 367
+++ T SS Y + TD E + + +QL
Sbjct: 357 NRSETASSGYA--SVQGTDEPPLEEHVQSTNESLQL 390
>gi|150378447 zinc and ring finger 3 [Homo sapiens]
Length = 836
Score = 83.2 bits (204), Expect = 4e-16
Identities = 56/195 (28%), Positives = 92/195 (47%), Gaps = 32/195 (16%)
Query: 120 IVHNVDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFTYEKGGHLILV------ 173
+ N ++ D ++ GS D LK+ P V++ + A L + +K +
Sbjct: 58 VSENPEAIDQLNQGSED--PLKR---PVVYVKGADAIKLMNIVNKQKVARARIQHRPPRQ 112
Query: 174 PEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKK 233
P + +L F+++ +CLIL+V K Q R + NRL L+K+ KF
Sbjct: 113 PTEYFDMGIFLAFFVVVSLVCLILLVKI---KLKQRRSQNSMNRLAVQALEKMETRKFNS 169
Query: 234 -----------------GDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
CAICL++Y DG++LR++PC+H +H KCVDPWL +
Sbjct: 170 KSKGRREGSCGALDTLSSSSTSDCAICLEKYIDGEELRVIPCTHRFHRKCVDPWLLQ-HH 228
Query: 277 TCPVCKQKVVPSQGD 291
TCP C+ ++ +G+
Sbjct: 229 TCPHCRHNIIEQKGN 243
>gi|37675277 ring finger protein 148 [Homo sapiens]
Length = 305
Score = 82.4 bits (202), Expect = 6e-16
Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 22/244 (9%)
Query: 55 FGYRLPAEGLKGF--LINSKPENACEPIVPPPVKDNSSGTFIVLIRRLDCNFDIKVLNAQ 112
FG P E + G L +NAC P+ + + +++ LI R C F K+ A
Sbjct: 62 FGNHSPLERVSGVVALPEGWNQNACHPLTNFS-RPKQADSWLALIERGGCTFTHKINVAA 120
Query: 113 RAGYKAAIVHNVDSDD-----LISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFTYEKG 167
G I++N + G+ +I + ++ + I S + E G
Sbjct: 121 EKGANGVIIYNYQGTGSKVFPMSHQGTENIVAVMISNLKGMEILHSIQKGVYVTVIIEVG 180
Query: 168 G-HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLK-- 224
H+ V + + YL FL L ++ +T V + RR++++ D K
Sbjct: 181 RMHMQWVSHYIM----YLFTFLAATIAYFYLDCVWRLTPRVPNSFTRRRSQIKTDVKKAI 236
Query: 225 -KLPVHKFKKGDEY-----DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTC 278
+L + K+GDE D C +C D Y+ D +RIL C H +H C+DPWL +TC
Sbjct: 237 DQLQLRVLKEGDEELDLNEDNCVVCFDTYKPQDVVRILTCKHFFHKACIDPWLL-AHRTC 295
Query: 279 PVCK 282
P+CK
Sbjct: 296 PMCK 299
>gi|29789407 ring finger protein 149 [Homo sapiens]
Length = 400
Score = 82.0 bits (201), Expect = 8e-16
Identities = 76/301 (25%), Positives = 125/301 (41%), Gaps = 53/301 (17%)
Query: 54 RFGYRLPAEGLKGFL-INSKPENACEPIVP------PPVKDNSSGTFIVLIRRLDCNFDI 106
RFG P EG G + + P E P P + ++ L+ R C F
Sbjct: 63 RFGDSSPKEGAHGLVGVPWAPGGDLEGCAPDTRFFVPEPGGRGAAPWVALVARGGCTFKD 122
Query: 107 KVLNAQRAGYKAAIVHNVDSDDLISMGSNDIEVLKKIDIPSVFIGESSANSLKDEFTYEK 166
KVL A R A +++N E I +P G + N + +Y K
Sbjct: 123 KVLVAARRNASAVVLYNE-------------ERYGNITLPMSHAG--TGNIVVIMISYPK 167
Query: 167 GGHLILVPEFSLPLE--------------------YYLIPFLIIVGICLILIVIFMITKF 206
G ++ + + +P+ + I F+ ++ I L ++ + I +F
Sbjct: 168 GREILELVQKGIPVTMTIGVGTRHVQEFISGQSVVFVAIAFITMMIISLAWLIFYYIQRF 227
Query: 207 VQDRHRARRNRLRKDQLK---KLPVHKFKKGDE-YDV----CAICLDEYEDGDKLRILPC 258
+ + RK+ K +L +H K G++ DV CA+C++ ++ D +RILPC
Sbjct: 228 LYTGSQIGSQSHRKETKKVIGQLLLHTVKHGEKGIDVDAENCAVCIENFKVKDIIRILPC 287
Query: 259 SHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDTDSSQEENEVTEHTPLLRPLASV 318
H +H C+DPWL +TCP+CK V+ + G D +E E P P A++
Sbjct: 288 KHIFHRICIDPWLL-DHRTCPMCKLDVIKALGYWGEPGD--VQEMPAPESPPGRDPAANL 344
Query: 319 S 319
S
Sbjct: 345 S 345
>gi|34452686 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 79.0 bits (193), Expect = 7e-15
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 195 LILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLR 254
L L F++ + D+ R L K+Q+ L + F + D C++C+ EY +G+KLR
Sbjct: 529 LSLAQFFLLNEDDDDQPRG----LTKEQIDNLAMRSFGENDALKTCSVCITEYTEGNKLR 584
Query: 255 ILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPS 288
LPCSH YH C+D WL++ TCP+C++ V+ S
Sbjct: 585 KLPCSHEYHVHCIDRWLSE-NSTCPICRRAVLAS 617
>gi|34452684 ring finger protein, LIM domain interacting [Homo
sapiens]
Length = 624
Score = 79.0 bits (193), Expect = 7e-15
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 5/94 (5%)
Query: 195 LILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLR 254
L L F++ + D+ R L K+Q+ L + F + D C++C+ EY +G+KLR
Sbjct: 529 LSLAQFFLLNEDDDDQPRG----LTKEQIDNLAMRSFGENDALKTCSVCITEYTEGNKLR 584
Query: 255 ILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPS 288
LPCSH YH C+D WL++ TCP+C++ V+ S
Sbjct: 585 KLPCSHEYHVHCIDRWLSE-NSTCPICRRAVLAS 617
>gi|37577185 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 69.7 bits (169), Expect = 4e-12
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 213 ARRNRLRKDQLKKLPVHKFKKGD---EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDP 269
A+ L K +++LP ++F + E +C +C+ ++E LR+LPC+H +H KCVD
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDK 409
Query: 270 WLTKTKKTCPVCKQKVVPSQGDSD 293
WL K +TCP+C+ DS+
Sbjct: 410 WL-KANRTCPICRADASEVHRDSE 432
>gi|37577181 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 69.7 bits (169), Expect = 4e-12
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 213 ARRNRLRKDQLKKLPVHKFKKGD---EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDP 269
A+ L K +++LP ++F + E +C +C+ ++E LR+LPC+H +H KCVD
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDK 409
Query: 270 WLTKTKKTCPVCKQKVVPSQGDSD 293
WL K +TCP+C+ DS+
Sbjct: 410 WL-KANRTCPICRADASEVHRDSE 432
>gi|37577179 ring finger protein 38 isoform 3 [Homo sapiens]
Length = 465
Score = 69.7 bits (169), Expect = 4e-12
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 213 ARRNRLRKDQLKKLPVHKFKKGD---EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDP 269
A+ L K +++LP ++F + E +C +C+ ++E LR+LPC+H +H KCVD
Sbjct: 383 AKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDK 442
Query: 270 WLTKTKKTCPVCKQKVVPSQGDSD 293
WL K +TCP+C+ DS+
Sbjct: 443 WL-KANRTCPICRADASEVHRDSE 465
>gi|37577177 ring finger protein 38 isoform 2 [Homo sapiens]
Length = 432
Score = 69.7 bits (169), Expect = 4e-12
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 213 ARRNRLRKDQLKKLPVHKFKKGD---EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDP 269
A+ L K +++LP ++F + E +C +C+ ++E LR+LPC+H +H KCVD
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDK 409
Query: 270 WLTKTKKTCPVCKQKVVPSQGDSD 293
WL K +TCP+C+ DS+
Sbjct: 410 WL-KANRTCPICRADASEVHRDSE 432
>gi|37577175 ring finger protein 38 isoform 1 [Homo sapiens]
Length = 515
Score = 69.7 bits (169), Expect = 4e-12
Identities = 30/84 (35%), Positives = 49/84 (58%), Gaps = 4/84 (4%)
Query: 213 ARRNRLRKDQLKKLPVHKFKKGD---EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDP 269
A+ L K +++LP ++F + E +C +C+ ++E LR+LPC+H +H KCVD
Sbjct: 433 AKPRGLTKADIEQLPSYRFNPNNHQSEQTLCVVCMCDFESRQLLRVLPCNHEFHAKCVDK 492
Query: 270 WLTKTKKTCPVCKQKVVPSQGDSD 293
WL K +TCP+C+ DS+
Sbjct: 493 WL-KANRTCPICRADASEVHRDSE 515
>gi|197245452 ring finger protein 24 isoform 2 [Homo sapiens]
Length = 169
Score = 67.4 bits (163), Expect = 2e-11
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 9/112 (8%)
Query: 177 SLPLEYYLIPF--LIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKG 234
+LPL Y++ F I V I +L ++I RH+A + Q+ + K K+
Sbjct: 40 NLPLNIYIVVFGTAIFVFILSLLFCCYLIRL----RHQAHKEFYAYKQV--ILKEKVKEL 93
Query: 235 DEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVV 286
+ +++CA+CL++++ D+L I PC HA+H KC+ WL + +K CP+C V+
Sbjct: 94 NLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWL-EVRKVCPLCNMPVL 144
>gi|197245450 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 67.4 bits (163), Expect = 2e-11
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 9/112 (8%)
Query: 177 SLPLEYYLIPF--LIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKG 234
+LPL Y++ F I V I +L ++I RH+A + Q+ + K K+
Sbjct: 19 NLPLNIYIVVFGTAIFVFILSLLFCCYLIRL----RHQAHKEFYAYKQV--ILKEKVKEL 72
Query: 235 DEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVV 286
+ +++CA+CL++++ D+L I PC HA+H KC+ WL + +K CP+C V+
Sbjct: 73 NLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWL-EVRKVCPLCNMPVL 123
>gi|6857791 ring finger protein 24 isoform 1 [Homo sapiens]
Length = 148
Score = 67.4 bits (163), Expect = 2e-11
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 9/112 (8%)
Query: 177 SLPLEYYLIPF--LIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPVHKFKKG 234
+LPL Y++ F I V I +L ++I RH+A + Q+ + K K+
Sbjct: 19 NLPLNIYIVVFGTAIFVFILSLLFCCYLIRL----RHQAHKEFYAYKQV--ILKEKVKEL 72
Query: 235 DEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVV 286
+ +++CA+CL++++ D+L I PC HA+H KC+ WL + +K CP+C V+
Sbjct: 73 NLHELCAVCLEDFKPRDELGICPCKHAFHRKCLIKWL-EVRKVCPLCNMPVL 123
>gi|7662486 ring finger protein 44 [Homo sapiens]
Length = 432
Score = 67.0 bits (162), Expect = 3e-11
Identities = 28/73 (38%), Positives = 44/73 (60%), Gaps = 4/73 (5%)
Query: 213 ARRNRLRKDQLKKLPVHKFKKGD---EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDP 269
A+ L K +++LP ++F E +C +C ++E LR+LPC+H +H KCVD
Sbjct: 350 AKPRGLTKADIEQLPSYRFNPDSHQSEQTLCVVCFSDFEARQLLRVLPCNHEFHTKCVDK 409
Query: 270 WLTKTKKTCPVCK 282
WL K +TCP+C+
Sbjct: 410 WL-KANRTCPICR 421
>gi|56711322 ring finger protein 43 [Homo sapiens]
Length = 783
Score = 64.3 bits (155), Expect = 2e-10
Identities = 27/58 (46%), Positives = 41/58 (70%), Gaps = 3/58 (5%)
Query: 239 VCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSDSDT 296
VCAICL+E+ +G +LR++ C H +H CVDPWL + +TCP+C + ++GDS S +
Sbjct: 271 VCAICLEEFSEGQELRVISCLHEFHRNCVDPWLHQ-HRTCPLCMFNI--TEGDSFSQS 325
>gi|5174653 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 62.8 bits (151), Expect = 5e-10
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 218 LRKDQLKKLPVHKFKKG----DEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTK 273
L K+Q+ L ++ + +C++C+ +Y G+KLR LPC H +H C+D WL++
Sbjct: 606 LTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSE 665
Query: 274 TKKTCPVCKQKVVPS 288
TCP+C+Q V+ S
Sbjct: 666 -NCTCPICRQPVLGS 679
>gi|34305295 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 62.8 bits (151), Expect = 5e-10
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 218 LRKDQLKKLPVHKFKKG----DEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTK 273
L K+Q+ L ++ + +C++C+ +Y G+KLR LPC H +H C+D WL++
Sbjct: 606 LTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSE 665
Query: 274 TKKTCPVCKQKVVPS 288
TCP+C+Q V+ S
Sbjct: 666 -NCTCPICRQPVLGS 679
>gi|34305293 ring finger protein 6 [Homo sapiens]
Length = 685
Score = 62.8 bits (151), Expect = 5e-10
Identities = 27/75 (36%), Positives = 45/75 (60%), Gaps = 5/75 (6%)
Query: 218 LRKDQLKKLPVHKFKKG----DEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTK 273
L K+Q+ L ++ + +C++C+ +Y G+KLR LPC H +H C+D WL++
Sbjct: 606 LTKEQIDNLSTRHYEHNSIDSELGKICSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSE 665
Query: 274 TKKTCPVCKQKVVPS 288
TCP+C+Q V+ S
Sbjct: 666 -NCTCPICRQPVLGS 679
>gi|63025220 ring finger protein 215 [Homo sapiens]
Length = 377
Score = 60.8 bits (146), Expect = 2e-09
Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 238 DVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVVPSQGDSD 293
+ CA+CLD + + LR+LPC H +H CVDPWL ++TCP+CK V+ ++ D
Sbjct: 323 ETCAVCLDYFCNKQWLRVLPCKHEFHRDCVDPWL-MLQQTCPLCKFNVLGNRYSDD 377
>gi|57165361 ring finger protein 165 [Homo sapiens]
Length = 346
Score = 60.5 bits (145), Expect = 2e-09
Identities = 29/80 (36%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 211 HRARRNRLRKDQLKKLPVHKFKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPW 270
H+ ++ R + + KK + ++ D + C ICL EDG+ +R LPC H +H CVD W
Sbjct: 268 HKYKKRRPQDGKGKK---DEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQW 324
Query: 271 LTKTKKTCPVCKQKVVPSQG 290
L +KK CP+C+ + G
Sbjct: 325 LAMSKK-CPICRVDIETQLG 343
>gi|38045931 ring finger protein 122 [Homo sapiens]
Length = 155
Score = 60.1 bits (144), Expect = 3e-09
Identities = 36/120 (30%), Positives = 64/120 (53%), Gaps = 18/120 (15%)
Query: 178 LPLEYYLIPFLIIVGICLILIVIFMITKFVQD-RHRARRNR------LRKDQLKKLPVHK 230
LPL Y++ F GI + ++ + F+ R++A+ R + K KKL ++
Sbjct: 33 LPLNIYMVIFG--TGIFVFMLSLIFCCYFISKLRNQAQSERYGYKEVVLKGDAKKLQLYG 90
Query: 231 FKKGDEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKVV-PSQ 289
CA+CL++++ D+L +LPC HA+H KC+ WL + + CP+C + + PS+
Sbjct: 91 -------QTCAVCLEDFKGKDELGVLPCQHAFHRKCLVKWL-EVRCVCPMCNKPIASPSE 142
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.136 0.398
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,179,734
Number of Sequences: 37866
Number of extensions: 650153
Number of successful extensions: 4435
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 161
Number of HSP's that attempted gapping in prelim test: 3678
Number of HSP's gapped (non-prelim): 666
length of query: 381
length of database: 18,247,518
effective HSP length: 104
effective length of query: 277
effective length of database: 14,309,454
effective search space: 3963718758
effective search space used: 3963718758
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.