Search of human proteins with 34147513

Search of human proteins with 34147513

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|34147513 RAB7, member RAS oncogene family [Homo sapiens]
         (207 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|34147513 RAB7, member RAS oncogene family [Homo sapiens]           418   e-117
gi|7705963 RAB9B, member RAS oncogene family [Homo sapiens]           210   8e-55
gi|4759012 RAB9A, member RAS oncogene family [Homo sapiens]           208   3e-54
gi|38490537 RAB7B, member RAS oncogene family [Homo sapiens]          182   2e-46
gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo sa...   133   9e-32
gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo sa...   133   9e-32
gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens]          132   2e-31
gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]           132   2e-31
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa...   132   3e-31
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]            132   3e-31
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]            132   3e-31
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]        131   4e-31
gi|4758984 Ras-related protein Rab-11A [Homo sapiens]                 131   4e-31
gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo sa...   131   5e-31
gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]          131   5e-31
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]           131   5e-31
gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo sa...   130   6e-31
gi|33589861 RAB31, member RAS oncogene family [Homo sapiens]          128   3e-30
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap...   127   5e-30
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]          127   5e-30
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]          127   9e-30
gi|21361884 RAB2B protein isoform 1 [Homo sapiens]                    126   1e-29
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]      126   1e-29
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]           126   1e-29
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]           125   2e-29
gi|11641237 RAB38 [Homo sapiens]                                      125   3e-29
gi|34485714 Ras-related protein Rab-23 [Homo sapiens]                 125   3e-29
gi|34485716 Ras-related protein Rab-23 [Homo sapiens]                 125   3e-29
gi|5729997 RAB27B, member RAS oncogene family [Homo sapiens]          124   4e-29
gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]          124   6e-29

>gi|34147513 RAB7, member RAS oncogene family [Homo sapiens]
          Length = 207

 Score =  418 bits (1074), Expect = e-117
 Identities = 207/207 (100%), Positives = 207/207 (100%)

Query: 1   MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
           MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ
Sbjct: 1   MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
           IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF
Sbjct: 61  IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120

Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
           VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV
Sbjct: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180

Query: 181 ELYNEFPEPIKLDKNDRAKASAESCSC 207
           ELYNEFPEPIKLDKNDRAKASAESCSC
Sbjct: 181 ELYNEFPEPIKLDKNDRAKASAESCSC 207


>gi|7705963 RAB9B, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  210 bits (534), Expect = 8e-55
 Identities = 105/203 (51%), Positives = 135/203 (66%), Gaps = 3/203 (1%)

Query: 3   SRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIW 62
           S K +LLKVI+LGD GVGK+SLMN+YV  KF +Q   TIG +FL +++ VD R VT+QIW
Sbjct: 2   SGKSLLLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIW 61

Query: 63  DTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVV 122
           DTAGQERF+SL   FYRGADCC+L F V    +F+ L +W+ EF+  A  +DPE+FPFVV
Sbjct: 62  DTAGQERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVV 121

Query: 123 LGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVEL 182
           LGNK+D E+RQV T+ AQ WC    + PY ETSAK+  NV  AF+   R  L  E ++E 
Sbjct: 122 LGNKVDKEDRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAFEEAVRQVLAVEEQLE- 180

Query: 183 YNEFPEPIKLDKNDRAKASAESC 205
                    +D N  +KA +  C
Sbjct: 181 --HCMLGHTIDLNSGSKAGSSCC 201


>gi|4759012 RAB9A, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  208 bits (529), Expect = 3e-54
 Identities = 98/173 (56%), Positives = 122/173 (70%)

Query: 5   KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDT 64
           K  L KVI+LGD GVGK+SLMN+YV  KF  Q   TIG +FL K++ VD   VTMQIWDT
Sbjct: 4   KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63

Query: 65  AGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLG 124
           AGQERF+SL   FYRG+DCC+L F V    +F+ L +W+ EF+  A  ++PE+FPFV+LG
Sbjct: 64  AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123

Query: 125 NKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
           NKID+  RQV+T+ AQAWC    + PYFETSAK+A NV  AF+   R  L  E
Sbjct: 124 NKIDISERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATE 176


>gi|38490537 RAB7B, member RAS oncogene family [Homo sapiens]
          Length = 199

 Score =  182 bits (462), Expect = 2e-46
 Identities = 96/192 (50%), Positives = 131/192 (68%), Gaps = 3/192 (1%)

Query: 1   MTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
           M  RKKV LK+II+G  GVGKTSL +QYV+K F  +Y+ T+GA  L+K +++ D  + +Q
Sbjct: 1   MNPRKKVDLKLIIVGAIGVGKTSLPHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60

Query: 61  IWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPF 120
           IWDT GQERF+S+   FY+G+D C+L FDVT   +F+ LD WR + L +  P + +++P 
Sbjct: 61  IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119

Query: 121 VVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
           V+LGNKIDL +R+V  + AQ WC  K +IPYFE SAK  INV QAF+ +A  AL +   +
Sbjct: 120 VLLGNKIDLADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRALSRYQSI 178

Query: 181 ELYNEFPEPIKL 192
            L N   E IKL
Sbjct: 179 -LENHLTESIKL 189


>gi|41393614 RAB5C, member RAS oncogene family isoform a [Homo
           sapiens]
          Length = 216

 Score =  133 bits (335), Expect = 9e-32
 Identities = 73/171 (42%), Positives = 105/171 (61%), Gaps = 6/171 (3%)

Query: 10  KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69
           K+++LG+S VGK+SL+ ++V  +F    ++TIGA FLT+ V +DD  V  +IWDTAGQER
Sbjct: 23  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82

Query: 70  FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129
           + SL   +YRGA   ++V+D+T  +TF    +W  E   QASP    N    + GNK DL
Sbjct: 83  YHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASP----NIVIALAGNKADL 138

Query: 130 -ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179
              R V  + AQA+    N++ + ETSAK A+NV + F  IA+   K E +
Sbjct: 139 ASKRAVEFQEAQAYA-DDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQ 188


>gi|41393545 RAB5C, member RAS oncogene family isoform b [Homo
           sapiens]
          Length = 216

 Score =  133 bits (335), Expect = 9e-32
 Identities = 73/171 (42%), Positives = 105/171 (61%), Gaps = 6/171 (3%)

Query: 10  KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69
           K+++LG+S VGK+SL+ ++V  +F    ++TIGA FLT+ V +DD  V  +IWDTAGQER
Sbjct: 23  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82

Query: 70  FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129
           + SL   +YRGA   ++V+D+T  +TF    +W  E   QASP    N    + GNK DL
Sbjct: 83  YHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASP----NIVIALAGNKADL 138

Query: 130 -ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179
              R V  + AQA+    N++ + ETSAK A+NV + F  IA+   K E +
Sbjct: 139 ASKRAVEFQEAQAYA-DDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQ 188


>gi|96975097 RAB6B, member RAS oncogene family [Homo sapiens]
          Length = 208

 Score =  132 bits (333), Expect = 2e-31
 Identities = 73/198 (36%), Positives = 112/198 (56%), Gaps = 4/198 (2%)

Query: 10  KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69
           K++ LG+  VGKTSL+ +++   F N Y+ATIG DFL+K + ++DR V +Q+WDTAGQER
Sbjct: 15  KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 74

Query: 70  FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129
           F+SL  ++ R +   V+V+D+T  N+F+    W D+   +       +   +++GNK DL
Sbjct: 75  FRSLIPSYIRDSTVAVVVYDITNLNSFQQTSKWIDDVRTERG----SDVIIMLVGNKTDL 130

Query: 130 ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEP 189
            +++  T         + ++ + ETSAK   NV+Q F+ +A      E   E   E    
Sbjct: 131 ADKRQITIEEGEQRAKELSVMFIETSAKTGYNVKQLFRRVASALPGMENVQEKSKEGMID 190

Query: 190 IKLDKNDRAKASAESCSC 207
           IKLDK     AS   CSC
Sbjct: 191 IKLDKPQEPPASEGGCSC 208


>gi|4506371 RAB5B, member RAS oncogene family [Homo sapiens]
          Length = 215

 Score =  132 bits (332), Expect = 2e-31
 Identities = 73/171 (42%), Positives = 104/171 (60%), Gaps = 6/171 (3%)

Query: 10  KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69
           K+++LG+S VGK+SL+ ++V  +F    ++TIGA FLT+ V +DD  V  +IWDTAGQER
Sbjct: 22  KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81

Query: 70  FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129
           + SL   +YRGA   ++V+D+T   TF    +W  E   QASP    +    + GNK DL
Sbjct: 82  YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASP----SIVIALAGNKADL 137

Query: 130 EN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179
            N R V  + AQA+    N++ + ETSAK A+NV   F  IA+   K E +
Sbjct: 138 ANKRMVEYEEAQAYA-DDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQ 187


>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
           family [Homo sapiens]
          Length = 327

 Score =  132 bits (331), Expect = 3e-31
 Identities = 63/167 (37%), Positives = 106/167 (63%), Gaps = 4/167 (2%)

Query: 8   LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
           L K++++GDSGVGKT L+ ++    F+N Y +TIG DF  + V ++ + + +Q+WDTAGQ
Sbjct: 132 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 191

Query: 68  ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
           ERF+++  A+YRGA   +L +D+T   +F+ + +W    +  AS         ++LGNK 
Sbjct: 192 ERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENAS----AGVEHLLLGNKC 247

Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174
           D+E ++   K        ++ I +FETSAK ++NV++AF ++AR+ L
Sbjct: 248 DMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 294


>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  132 bits (331), Expect = 3e-31
 Identities = 63/167 (37%), Positives = 106/167 (63%), Gaps = 4/167 (2%)

Query: 8   LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
           L K++++GDSGVGKT L+ ++    F+N Y +TIG DF  + V ++ + + +Q+WDTAGQ
Sbjct: 132 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 191

Query: 68  ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
           ERF+++  A+YRGA   +L +D+T   +F+ + +W    +  AS         ++LGNK 
Sbjct: 192 ERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENAS----AGVEHLLLGNKC 247

Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174
           D+E ++   K        ++ I +FETSAK ++NV++AF ++AR+ L
Sbjct: 248 DMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 294


>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
          Length = 327

 Score =  132 bits (331), Expect = 3e-31
 Identities = 63/167 (37%), Positives = 106/167 (63%), Gaps = 4/167 (2%)

Query: 8   LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
           L K++++GDSGVGKT L+ ++    F+N Y +TIG DF  + V ++ + + +Q+WDTAGQ
Sbjct: 132 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 191

Query: 68  ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
           ERF+++  A+YRGA   +L +D+T   +F+ + +W    +  AS         ++LGNK 
Sbjct: 192 ERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENAS----AGVEHLLLGNKC 247

Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174
           D+E ++   K        ++ I +FETSAK ++NV++AF ++AR+ L
Sbjct: 248 DMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 294


>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  131 bits (330), Expect = 4e-31
 Identities = 66/163 (40%), Positives = 108/163 (66%), Gaps = 6/163 (3%)

Query: 8   LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
           L KV+++GDSGVGK++L++++   +F+ + K+TIG +F T+ + VD + +  QIWDTAGQ
Sbjct: 11  LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70

Query: 68  ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
           ER++++  A+YRGA   +LV+D+    T++ ++ W  E    A      N   +++GNK 
Sbjct: 71  ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVGNKS 126

Query: 128 DLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169
           DL + R V T  A+A+   KNN+ + ETSA ++ NVE+AF+ I
Sbjct: 127 DLRHLRAVPTDEARAFA-EKNNLSFIETSALDSTNVEEAFKNI 168


>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
          Length = 216

 Score =  131 bits (330), Expect = 4e-31
 Identities = 67/163 (41%), Positives = 107/163 (65%), Gaps = 6/163 (3%)

Query: 8   LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
           L KV+++GDSGVGK++L++++   +F+ + K+TIG +F T+ + VD + +  QIWDTAGQ
Sbjct: 11  LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70

Query: 68  ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
           ER++++  A+YRGA   +LV+D+    T++ ++ W  E    A      N   +++GNK 
Sbjct: 71  ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHAD----SNIVIMLVGNKS 126

Query: 128 DLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTI 169
           DL + R V T  A+A+   KN + + ETSA ++ NVE AFQTI
Sbjct: 127 DLRHLRAVPTDEARAFA-EKNGLSFIETSALDSTNVEAAFQTI 168


>gi|38679888 RAB6A, member RAS oncogene family isoform b [Homo
           sapiens]
          Length = 208

 Score =  131 bits (329), Expect = 5e-31
 Identities = 73/199 (36%), Positives = 115/199 (57%), Gaps = 6/199 (3%)

Query: 10  KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69
           K++ LG+  VGKTSL+ +++   F N Y+ATIG DFL+K + ++DR V +Q+WDTAGQER
Sbjct: 15  KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTVRLQLWDTAGQER 74

Query: 70  FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129
           F+SL  ++ R +   V+V+D+T  N+F+    W D+   +       +   +++GNK DL
Sbjct: 75  FRSLIPSYIRDSTVAVVVYDITNVNSFQQTTKWIDDVRTERG----SDVIIMLVGNKTDL 130

Query: 130 -ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPE 188
            + RQV+ +  +     + N+ + ETSAK   NV+Q F+ +A      E+  +   E   
Sbjct: 131 ADKRQVSIEEGERKA-KELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMI 189

Query: 189 PIKLDKNDRAKASAESCSC 207
            IKL+K      S   CSC
Sbjct: 190 DIKLEKPQEQPVSEGGCSC 208


>gi|19923262 RAB5A, member RAS oncogene family [Homo sapiens]
          Length = 215

 Score =  131 bits (329), Expect = 5e-31
 Identities = 73/179 (40%), Positives = 107/179 (59%), Gaps = 6/179 (3%)

Query: 2   TSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQI 61
           T  K    K+++LG+S VGK+SL+ ++V  +F    ++TIGA FLT+ V +DD  V  +I
Sbjct: 14  TGNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLTQTVCLDDTTVKFEI 73

Query: 62  WDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFV 121
           WDTAGQER+ SL   +YRGA   ++V+D+T   +F    +W  E   QASP    N    
Sbjct: 74  WDTAGQERYHSLAPMYYRGAQAAIVVYDITNEESFARAKNWVKELQRQASP----NIVIA 129

Query: 122 VLGNKIDLEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETE 179
           + GNK DL N R V  + AQ++    N++ + ETSAK ++NV + F  IA+   K E +
Sbjct: 130 LSGNKADLANKRAVDFQEAQSYA-DDNSLLFMETSAKTSMNVNEIFMAIAKKLPKNEPQ 187


>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  131 bits (329), Expect = 5e-31
 Identities = 64/167 (38%), Positives = 106/167 (63%), Gaps = 4/167 (2%)

Query: 8   LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
           L K++++GDSGVGKT L+ ++    F+N Y +TIG DF  + V ++ + + +Q+WDTAGQ
Sbjct: 8   LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67

Query: 68  ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
           ERF+++  A+YRGA   +LV+D+T   +F+ + +W       AS         ++LGNK 
Sbjct: 68  ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENAS----AGVERLLLGNKC 123

Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL 174
           D+E ++   K        ++ I +FETSAK ++NV++AF ++AR+ L
Sbjct: 124 DMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDIL 170


>gi|19923231 RAB6A, member RAS oncogene family isoform a [Homo
           sapiens]
          Length = 208

 Score =  130 bits (328), Expect = 6e-31
 Identities = 72/199 (36%), Positives = 115/199 (57%), Gaps = 6/199 (3%)

Query: 10  KVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQER 69
           K++ LG+  VGKTSL+ +++   F N Y+ATIG DFL+K + ++DR + +Q+WDTAGQER
Sbjct: 15  KLVFLGEQSVGKTSLITRFMYDSFDNTYQATIGIDFLSKTMYLEDRTIRLQLWDTAGQER 74

Query: 70  FQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDL 129
           F+SL  ++ R +   V+V+D+T  N+F+    W D+   +       +   +++GNK DL
Sbjct: 75  FRSLIPSYIRDSAAAVVVYDITNVNSFQQTTKWIDDVRTERG----SDVIIMLVGNKTDL 130

Query: 130 -ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPE 188
            + RQV+ +  +     + N+ + ETSAK   NV+Q F+ +A      E+  +   E   
Sbjct: 131 ADKRQVSIEEGERKA-KELNVMFIETSAKAGYNVKQLFRRVAAALPGMESTQDRSREDMI 189

Query: 189 PIKLDKNDRAKASAESCSC 207
            IKL+K      S   CSC
Sbjct: 190 DIKLEKPQEQPVSEGGCSC 208


>gi|33589861 RAB31, member RAS oncogene family [Homo sapiens]
          Length = 195

 Score =  128 bits (322), Expect = 3e-30
 Identities = 73/164 (44%), Positives = 98/164 (59%), Gaps = 6/164 (3%)

Query: 9   LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68
           LKV +LGD+GVGK+S++ ++V   F +    TIGA F+TK V   + L    IWDTAGQE
Sbjct: 7   LKVCLLGDTGVGKSSIVCRFVQDHFDHNISPTIGASFMTKTVPCGNELHKFLIWDTAGQE 66

Query: 69  RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128
           RF SL   +YRG+   V+V+D+T  ++F TL  W  E         PEN    + GNK D
Sbjct: 67  RFHSLAPMYYRGSAAAVIVYDITKQDSFYTLKKWVKEL----KEHGPENIVMAIAGNKCD 122

Query: 129 LEN-RQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAR 171
           L + R+V  K A+ +  S   I   ETSAK AIN+E+ FQ I+R
Sbjct: 123 LSDIREVPLKDAKEYAESIGAI-VVETSAKNAINIEELFQGISR 165


>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
           sapiens]
          Length = 205

 Score =  127 bits (320), Expect = 5e-30
 Identities = 65/169 (38%), Positives = 102/169 (60%), Gaps = 4/169 (2%)

Query: 8   LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
           L K++++GDSGVGK+ L+ ++ +  ++  Y +TIG DF  + + +D + + +QIWDTAGQ
Sbjct: 11  LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 70

Query: 68  ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
           ERF+++  ++YRGA   ++V+DVT   +F  +  W  E    AS    EN   +++GNK 
Sbjct: 71  ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYAS----ENVNKLLVGNKC 126

Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176
           DL  ++V              IP+ ETSAK A NVEQ+F T+A    K+
Sbjct: 127 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKR 175


>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
          Length = 201

 Score =  127 bits (320), Expect = 5e-30
 Identities = 65/169 (38%), Positives = 102/169 (60%), Gaps = 4/169 (2%)

Query: 8   LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
           L K++++GDSGVGK+ L+ ++ +  ++  Y +TIG DF  + + +D + + +QIWDTAGQ
Sbjct: 8   LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67

Query: 68  ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
           ERF+++  ++YRGA   ++V+DVT   ++  +  W  E    AS    EN   +++GNK 
Sbjct: 68  ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYAS----ENVNKLLVGNKS 123

Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176
           DL  ++V              IP+ ETSAK A NVEQAF T+A    K+
Sbjct: 124 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKR 172


>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
          Length = 203

 Score =  127 bits (318), Expect = 9e-30
 Identities = 70/184 (38%), Positives = 111/184 (60%), Gaps = 6/184 (3%)

Query: 8   LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
           L K++++G++GVGKT L+ ++    F     ATIG DF+ K V ++   V +QIWDTAGQ
Sbjct: 9   LFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDTAGQ 68

Query: 68  ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
           ERF+S+  ++YR A+  +L +D+T   +F+ L  W  E    AS         V++GNKI
Sbjct: 69  ERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYAS----NKVITVLVGNKI 124

Query: 128 DL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEF 186
           DL E R+V+ +RA+ +  ++ ++ Y ETSAKE+ NVE+ F  +A   + +  +  L N  
Sbjct: 125 DLAERREVSQQRAEEFSEAQ-DMYYLETSAKESDNVEKLFLDLACRLISEARQNTLVNNV 183

Query: 187 PEPI 190
             P+
Sbjct: 184 SSPL 187


>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
          Length = 216

 Score =  126 bits (317), Expect = 1e-29
 Identities = 70/181 (38%), Positives = 112/181 (61%), Gaps = 8/181 (4%)

Query: 8   LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
           L K II+GD+GVGK+ L+ Q+ +K+F   +  TIG +F  + V +D + + +QIWDTAGQ
Sbjct: 6   LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAGQ 65

Query: 68  ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
           E F+S+  ++YRGA   +LV+D+T   TF  L SW ++    A      N   +++GNK 
Sbjct: 66  ESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLED----ARQHSSSNMVIMLIGNKS 121

Query: 128 DLENRQVATKRAQAWCYSK-NNIPYFETSAKEAINVEQAFQTIARNALK--QETEVELYN 184
           DLE+R+   KR +   +++ + + + ETSAK A NVE+AF   A+   +  Q+   +++N
Sbjct: 122 DLESRR-DVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180

Query: 185 E 185
           E
Sbjct: 181 E 181


>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
          Length = 200

 Score =  126 bits (316), Expect = 1e-29
 Identities = 63/170 (37%), Positives = 107/170 (62%), Gaps = 4/170 (2%)

Query: 7   VLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAG 66
           +L K++++GDSGVGKT ++ ++ +  F+  + +TIG DF  K V +  + + +QIWDTAG
Sbjct: 8   LLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAG 67

Query: 67  QERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNK 126
           QERF ++  ++YRGA   +LV+D+T   +F+ +  W    L        E+   ++LGNK
Sbjct: 68  QERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNK 123

Query: 127 IDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176
            D+++++V  K        ++ I +FETSAK  IN+E+AF T+A + L++
Sbjct: 124 CDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRK 173


>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
          Length = 212

 Score =  126 bits (316), Expect = 1e-29
 Identities = 68/180 (37%), Positives = 108/180 (60%), Gaps = 6/180 (3%)

Query: 8   LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
           L K II+GD+GVGK+ L+ Q+ +K+F   +  TIG +F  + + +D + + +QIWDTAGQ
Sbjct: 6   LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQ 65

Query: 68  ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
           E F+S+  ++YRGA   +LV+D+T  +TF  L +W ++    A      N   +++GNK 
Sbjct: 66  ESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLED----ARQHSNSNMVIMLIGNKS 121

Query: 128 DLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK--QETEVELYNE 185
           DLE+R+   K        ++ + + ETSAK A NVE+AF   A+   +  QE   ++ NE
Sbjct: 122 DLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNE 181


>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
          Length = 207

 Score =  125 bits (315), Expect = 2e-29
 Identities = 76/203 (37%), Positives = 120/203 (59%), Gaps = 9/203 (4%)

Query: 8   LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQ 67
           L K++++GDSGVGKT L+ ++    F+  + +TIG DF  + + +D + + +QIWDTAGQ
Sbjct: 8   LFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQ 67

Query: 68  ERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKI 127
           ERF+++  A+YRGA   +LV+D+T   +F  + +W       AS  D E    ++LGNK 
Sbjct: 68  ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHAS-SDVER---MILGNKC 123

Query: 128 DL-ENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNAL-KQETEVELYNE 185
           D+ + RQV+ +R +        I + ETSAK + NVE+AF T+AR+ + K   ++   N 
Sbjct: 124 DMNDKRQVSKERGEKLAID-YGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSNS 182

Query: 186 FPE--PIKLDKNDRAKASAESCS 206
                P+K+ +N   K S   CS
Sbjct: 183 AGAGGPVKITENRSKKTSFFRCS 205


>gi|11641237 RAB38 [Homo sapiens]
          Length = 211

 Score =  125 bits (314), Expect = 3e-29
 Identities = 71/206 (34%), Positives = 121/206 (58%), Gaps = 6/206 (2%)

Query: 5   KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVD-DRLVTMQIWD 63
           K+ L K++++GD GVGKTS++ +YV++ FS+ Y+ATIG DF  K +  D + +V +Q+WD
Sbjct: 6   KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65

Query: 64  TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
            AGQERF ++   +YR A    +VFDVT P TF+ +  W+++   + S  + +    V+L
Sbjct: 66  IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPVSVVLL 125

Query: 124 GNKIDLENRQVATK---RAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
            NK D + + V      +   +C     + +FETSAKE IN+++A + + ++ L  E ++
Sbjct: 126 ANKCD-QGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANECDL 184

Query: 181 ELYNEFPEPIKLDKNDRAKASAESCS 206
            + +  P+ +K        AS   C+
Sbjct: 185 -MESIEPDVVKPHLTSTKVASCSGCA 209


>gi|34485714 Ras-related protein Rab-23 [Homo sapiens]
          Length = 237

 Score =  125 bits (313), Expect = 3e-29
 Identities = 61/172 (35%), Positives = 107/172 (62%), Gaps = 7/172 (4%)

Query: 6   KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65
           +V +K++++G+  VGK+S++ +Y    F+  YK TIG DFL +++ V+D  V + +WDTA
Sbjct: 7   EVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTA 66

Query: 66  GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125
           GQE F ++  A+YRGA  CVLVF  T   +F+ + SWR++ + +       + P V++ N
Sbjct: 67  GQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVG-----DIPTVLVQN 121

Query: 126 KID-LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176
           KID L++  +  + A+A    +  + ++ TS KE +NV + F+ +A   L++
Sbjct: 122 KIDLLDDSCIKNEEAEALA-KRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQK 172


>gi|34485716 Ras-related protein Rab-23 [Homo sapiens]
          Length = 237

 Score =  125 bits (313), Expect = 3e-29
 Identities = 61/172 (35%), Positives = 107/172 (62%), Gaps = 7/172 (4%)

Query: 6   KVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTA 65
           +V +K++++G+  VGK+S++ +Y    F+  YK TIG DFL +++ V+D  V + +WDTA
Sbjct: 7   EVAIKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTA 66

Query: 66  GQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGN 125
           GQE F ++  A+YRGA  CVLVF  T   +F+ + SWR++ + +       + P V++ N
Sbjct: 67  GQEEFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVVAEVG-----DIPTVLVQN 121

Query: 126 KID-LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQ 176
           KID L++  +  + A+A    +  + ++ TS KE +NV + F+ +A   L++
Sbjct: 122 KIDLLDDSCIKNEEAEALA-KRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQK 172


>gi|5729997 RAB27B, member RAS oncogene family [Homo sapiens]
          Length = 218

 Score =  124 bits (312), Expect = 4e-29
 Identities = 72/213 (33%), Positives = 117/213 (54%), Gaps = 16/213 (7%)

Query: 8   LLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDR----------LV 57
           L+K++ LGDSGVGKT+ + +Y + KF+ ++  T+G DF  K V+ + +           V
Sbjct: 9   LIKLLALGDSGVGKTTFLYRYTDNKFNPKFITTVGIDFREKRVVYNAQGPNGSSGKAFKV 68

Query: 58  TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPEN 117
            +Q+WDTAGQERF+SL  AF+R A   +L+FD+T+  +F  + +W  +    A   +P+ 
Sbjct: 69  HLQLWDTAGQERFRSLTTAFFRDAMGFLLMFDLTSQQSFLNVRNWMSQLQANAYCENPD- 127

Query: 118 FPFVVLGNKIDLENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
              V++GNK DL +++   +R       K  IPYFETSA    NVE+A +T+    +K+ 
Sbjct: 128 --IVLIGNKADLPDQREVNERQARELADKYGIPYFETSAATGQNVEKAVETLLDLIMKRM 185

Query: 178 TEVELYNEFPEPIKLDKN---DRAKASAESCSC 207
            +     + P+ +    +   D  K   + C C
Sbjct: 186 EQCVEKTQIPDTVNGGNSGNLDGEKPPEKKCIC 218


>gi|10880989 RAB18, member RAS oncogene family [Homo sapiens]
          Length = 206

 Score =  124 bits (311), Expect = 6e-29
 Identities = 66/167 (39%), Positives = 102/167 (61%), Gaps = 4/167 (2%)

Query: 9   LKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQE 68
           LK++I+G+SGVGK+SL+ ++ +  F  +  ATIG DF  K + VD     + IWDTAGQE
Sbjct: 9   LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68

Query: 69  RFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKID 128
           RF++L  ++YRGA   +LV+DVT  +TF  LD+W +E     +  D  N   +++GNKID
Sbjct: 69  RFRTLTPSYYRGAQGVILVYDVTRRDTFVKLDNWLNELETYCTRNDIVN---MLVGNKID 125

Query: 129 LENRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175
            ENR+V       +   K+++ + E SAK    V+ AF+ +    ++
Sbjct: 126 KENREVDRNEGLKFA-RKHSMLFIEASAKTCDGVQCAFEELVEKIIQ 171


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.318    0.132    0.386 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,734,359
Number of Sequences: 37866
Number of extensions: 257019
Number of successful extensions: 1162
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 198
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 725
Number of HSP's gapped (non-prelim): 254
length of query: 207
length of database: 18,247,518
effective HSP length: 98
effective length of query: 109
effective length of database: 14,536,650
effective search space: 1584494850
effective search space used: 1584494850
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.