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Search of human proteins with 33620759
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33620759 LRP2 binding protein [Homo sapiens]
(347 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33620759 LRP2 binding protein [Homo sapiens] 711 0.0
gi|19923669 sel-1 suppressor of lin-12-like [Homo sapiens] 61 1e-09
gi|151301150 sel-1 suppressor of lin-12-like 2 [Homo sapiens] 55 1e-07
gi|217330658 hypothetical protein LOC9812 [Homo sapiens] 54 2e-07
gi|217330656 hypothetical protein LOC9812 [Homo sapiens] 54 2e-07
gi|154689719 hypothetical protein LOC23231 [Homo sapiens] 40 0.003
gi|12751491 hypothetical protein LOC65260 [Homo sapiens] 38 0.015
gi|115430239 spectrin, beta, non-erythrocytic 4 isoform sigma5 [... 33 0.29
gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [... 33 0.29
gi|170784869 tetratricopeptide repeat domain 13 isoform b [Homo ... 33 0.38
gi|170784867 tetratricopeptide repeat domain 13 isoform a [Homo ... 33 0.38
gi|28558993 intraflagellar transport 88 homolog isoform 1 [Homo ... 33 0.38
gi|28329439 intraflagellar transport 88 homolog isoform 2 [Homo ... 33 0.38
gi|239756104 PREDICTED: tetratricopeptide repeat domain 6 [Homo ... 33 0.49
gi|239750633 PREDICTED: tetratricopeptide repeat domain 6 [Homo ... 33 0.49
gi|117553586 dedicator of cytokinesis 5 [Homo sapiens] 32 0.84
gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens] 32 1.1
gi|239744942 PREDICTED: chromosome 14 open reading frame 25 [Hom... 32 1.1
gi|62241003 cardiomyopathy associated 5 [Homo sapiens] 31 1.9
gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... 30 2.4
gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform... 30 2.4
gi|93102364 SWAP-70 protein [Homo sapiens] 30 3.2
gi|57164948 solute carrier family 30 (zinc transporter), member ... 30 3.2
gi|11036654 protocadherin beta 13 precursor [Homo sapiens] 30 3.2
gi|7662078 tetratricopeptide repeat domain 37 [Homo sapiens] 29 5.4
gi|157419126 laminin, alpha 4 isoform 2 precursor [Homo sapiens] 29 7.1
gi|157419124 laminin, alpha 4 isoform 1 precursor [Homo sapiens] 29 7.1
gi|157419122 laminin, alpha 4 isoform 2 precursor [Homo sapiens] 29 7.1
gi|22749211 transmembrane and tetratricopeptide repeat containin... 29 7.1
gi|71040096 Rho GTPase activating protein 30 isoform 2 [Homo sap... 29 7.1
>gi|33620759 LRP2 binding protein [Homo sapiens]
Length = 347
Score = 711 bits (1834), Expect = 0.0
Identities = 347/347 (100%), Positives = 347/347 (100%)
Query: 1 MKLTSEKLPKNPFYASVSQYAAKNQKFFQWKKEKTDYTHANLVDKALQLLKERILKGDTL 60
MKLTSEKLPKNPFYASVSQYAAKNQKFFQWKKEKTDYTHANLVDKALQLLKERILKGDTL
Sbjct: 1 MKLTSEKLPKNPFYASVSQYAAKNQKFFQWKKEKTDYTHANLVDKALQLLKERILKGDTL 60
Query: 61 AYFLRGQLYFEEGWYEEALEQFEEIKEKDHQATYQLGVMYYDGLGTTLDAEKGVDYMKKI 120
AYFLRGQLYFEEGWYEEALEQFEEIKEKDHQATYQLGVMYYDGLGTTLDAEKGVDYMKKI
Sbjct: 61 AYFLRGQLYFEEGWYEEALEQFEEIKEKDHQATYQLGVMYYDGLGTTLDAEKGVDYMKKI 120
Query: 121 LDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPKASVKAQSMLG 180
LDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPKASVKAQSMLG
Sbjct: 121 LDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPKASVKAQSMLG 180
Query: 181 LYYSTKEPKELEKAFYWHSEACGNGNLESQGALGLMYLYGQGIRQDTEAALQCLREAAER 240
LYYSTKEPKELEKAFYWHSEACGNGNLESQGALGLMYLYGQGIRQDTEAALQCLREAAER
Sbjct: 181 LYYSTKEPKELEKAFYWHSEACGNGNLESQGALGLMYLYGQGIRQDTEAALQCLREAAER 240
Query: 241 GNVYAQGNLVEYYYKMKFFTKCVAFSKRIADYDEVHDIPMIAQVTDCLPEFIGRGMAMAS 300
GNVYAQGNLVEYYYKMKFFTKCVAFSKRIADYDEVHDIPMIAQVTDCLPEFIGRGMAMAS
Sbjct: 241 GNVYAQGNLVEYYYKMKFFTKCVAFSKRIADYDEVHDIPMIAQVTDCLPEFIGRGMAMAS 300
Query: 301 FYHARCLQLGLGITRDETTAKHYYSKACRLNPALADELHSLLIRQRI 347
FYHARCLQLGLGITRDETTAKHYYSKACRLNPALADELHSLLIRQRI
Sbjct: 301 FYHARCLQLGLGITRDETTAKHYYSKACRLNPALADELHSLLIRQRI 347
>gi|19923669 sel-1 suppressor of lin-12-like [Homo sapiens]
Length = 794
Score = 61.2 bits (147), Expect = 1e-09
Identities = 41/124 (33%), Positives = 68/124 (54%), Gaps = 8/124 (6%)
Query: 135 AAYNLGRAY-YEGKGVKRSNEEAERLWLIAADNGNPKASVKAQSMLGLYYSTKE---PKE 190
A LG+ + + G+GV+++++ A + +AA+ GN A + LG YS P+
Sbjct: 375 AQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHA----MAFLGKMYSEGSDIVPQS 430
Query: 191 LEKAFYWHSEACGNGNLESQGALGLMYLYGQGIRQDTEAALQCLREAAERGNVYAQGNLV 250
E A ++ +A GN Q LG+ YLYG+G++ + + AL+ ++AAE+G V Q L
Sbjct: 431 NETALHYFKKAADMGNPVGQSGLGMAYLYGRGVQVNYDLALKYFQKAAEQGWVDGQLQLG 490
Query: 251 EYYY 254
YY
Sbjct: 491 SMYY 494
Score = 57.8 bits (138), Expect = 1e-08
Identities = 53/183 (28%), Positives = 90/183 (49%), Gaps = 16/183 (8%)
Query: 76 EEALEQFEEIKEK-DHQATYQLGVMY-YDGLGTTLDAEKGVDYMKKILDSPCPKARHLKF 133
E+ ++ ++ + EK D QA LG ++ + G G + ++ DY L + + + F
Sbjct: 358 EDLIQYYQFLAEKGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFN--LAANAGNSHAMAF 415
Query: 134 AAAYNLGRAYYEGKG-VKRSNEEAERLWLIAADNGNPKASVKAQSMLGLYYSTKEPKEL- 191
LG+ Y EG V +SNE A + AAD GNP QS LG+ Y ++
Sbjct: 416 -----LGKMYSEGSDIVPQSNETALHYFKKAADMGNPVG----QSGLGMAYLYGRGVQVN 466
Query: 192 -EKAFYWHSEACGNGNLESQGALGLMYLYGQGIRQDTEAALQCLREAAERGNVYAQGNLV 250
+ A + +A G ++ Q LG MY G G+++D + AL+ A++ G++ A NL
Sbjct: 467 YDLALKYFQKAAEQGWVDGQLQLGSMYYNGIGVKRDYKQALKYFNLASQGGHILAFYNLA 526
Query: 251 EYY 253
+ +
Sbjct: 527 QMH 529
Score = 44.3 bits (103), Expect = 2e-04
Identities = 47/193 (24%), Positives = 80/193 (41%), Gaps = 16/193 (8%)
Query: 56 KGDTLAYFLRGQLYFEEGW-----YEEALEQFE-EIKEKDHQATYQLGVMYYDGLGTTLD 109
KGD A GQL+ G ++ A + F + A LG MY +G
Sbjct: 370 KGDVQAQVGLGQLHLHGGRGVEQNHQRAFDYFNLAANAGNSHAMAFLGKMYSEGSDIVPQ 429
Query: 110 A-EKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNGN 168
+ E + Y KK D P + LG AY G+GV+ + + A + + AA+ G
Sbjct: 430 SNETALHYFKKAADMGNPVGQS-------GLGMAYLYGRGVQVNYDLALKYFQKAAEQGW 482
Query: 169 PKASVKAQSMLGLYYSTKEPKELEKAFYWHSEACGNGNLESQGALGLMYLYGQGIRQDTE 228
++ SM Y ++ ++A + + A G++ + L M+ G G+ +
Sbjct: 483 VDGQLQLGSMY--YNGIGVKRDYKQALKYFNLASQGGHILAFYNLAQMHASGTGVMRSCH 540
Query: 229 AALQCLREAAERG 241
A++ + ERG
Sbjct: 541 TAVELFKNVCERG 553
Score = 33.9 bits (76), Expect = 0.22
Identities = 28/109 (25%), Positives = 40/109 (36%), Gaps = 2/109 (1%)
Query: 137 YNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPKASVKAQSMLGLYYSTKEPKELEKAFY 196
Y G G K EA R AA + KA + L + P+ ++ A
Sbjct: 187 YQTGMKILNGSNKKSQKREAYRYLQKAASMNHTKALERVS--YALLFGDYLPQNIQAARE 244
Query: 197 WHSEACGNGNLESQGALGLMYLYGQGIRQDTEAALQCLREAAERGNVYA 245
+ G+ + Q ALG +Y G G+ AL A GN+ A
Sbjct: 245 MFEKLTEEGSPKGQTALGFLYASGLGVNSSQAKALVYYTFGALGGNLIA 293
Score = 31.2 bits (69), Expect = 1.4
Identities = 27/95 (28%), Positives = 43/95 (45%), Gaps = 10/95 (10%)
Query: 92 ATYQLGVMYYDGLGTTLDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVKR 151
A +LG ++ G GT VDY + + A +NLG + +G G+K+
Sbjct: 629 ARIKLGDYHFYGFGTD------VDYETAFIHYRLASEQQHSAQAMFNLGYMHEKGLGIKQ 682
Query: 152 SNEEAERLWLIAADNGNPKASVK---AQSMLGLYY 183
A+R + +AA+ +P A V A LG+ Y
Sbjct: 683 DIHLAKRFYDMAAE-ASPDAQVPVFLALCKLGVVY 716
>gi|151301150 sel-1 suppressor of lin-12-like 2 [Homo sapiens]
Length = 688
Score = 54.7 bits (130), Expect = 1e-07
Identities = 69/278 (24%), Positives = 101/278 (36%), Gaps = 65/278 (23%)
Query: 96 LGVMYYDGLGTTLDAEKGVDYMKKILDS-----------PCPKAR--------------- 129
LG Y G+ + E + Y KK+ D P K R
Sbjct: 221 LGYRYLSGINVLQNCEVALSYYKKVADYIADTFEKSEGVPVEKVRLTERPENLSSNSEIL 280
Query: 130 ------HLKFAAA-------YNLGRAYYEG-KGVKRSNEEAERLWLIAADNGNPKASVKA 175
+ KF A +LG+ + G KG+ + +A +L AA G S A
Sbjct: 281 DWDIYQYYKFLAERGDVQIQVSLGQLHLIGRKGLDQDYYKALHYFLKAAKAG----SANA 336
Query: 176 QSMLGLYY---STKEPKELEKAFYWHSEACGNGNLESQGALGLMYLYGQGIRQDTEAALQ 232
+ +G Y + P+ AF + S A GN LGL+Y +G+G+ + AL+
Sbjct: 337 MAFIGKMYLEGNAAVPQNNATAFKYFSMAASKGNAIGLHGLGLLYFHGKGVPLNYAEALK 396
Query: 233 CLREAAERGNVYAQGNLVEYYYKMKFFTKCVAFSKRIADYDEVHDIPMIAQVTDCLPEFI 292
++AAE+G AQ L YY K DY +A +
Sbjct: 397 YFQKAAEKGWPDAQFQLGFMYYSGSGIWK---------DYKLAFKYFYLASQS------- 440
Query: 293 GRGMAMASFYHARCLQLGLGITRDETTAKHYYSKACRL 330
G +A +Y A+ G G+ R TA Y C L
Sbjct: 441 --GQPLAIYYLAKMYATGTGVVRSCRTAVELYKGVCEL 476
Score = 54.3 bits (129), Expect = 2e-07
Identities = 73/291 (25%), Positives = 111/291 (38%), Gaps = 49/291 (16%)
Query: 56 KGDTLAYFLRGQLYFEEGW----YEEALEQFEEIKEKDH-QATYQLGVMYYDGLGTTLDA 110
KG+ + G LYF Y EAL+ F++ EK A +QLG MYY G G D
Sbjct: 368 KGNAIGLHGLGLLYFHGKGVPLNYAEALKYFQKAAEKGWPDAQFQLGFMYYSGSGIWKDY 427
Query: 111 EKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPK 170
+ Y S P A Y L + Y G GV RS A L+ + G+
Sbjct: 428 KLAFKYFYLASQSGQP-------LAIYYLAKMYATGTGVVRSCRTAVELYKGVCELGH-- 478
Query: 171 ASVKAQSMLGLYYSTKEPKELEKAFYWHS--EACGNGNLESQGALGLMYLYGQGIRQDT- 227
A+ L Y++ K+ +++ + ++ G +S A L + ++
Sbjct: 479 ---WAEKFLTAYFAYKD-GDIDSSLVQYALLAEMGYEVAQSNSAFILESKKANILEKEKM 534
Query: 228 -EAALQCLREAAERGNVYAQGNLVEYYY-----KMKFFTKCVAFSKRIADYDEVHDIPMI 281
AL AA +GN +A+ + +Y+Y K + T +S Y
Sbjct: 535 YPMALLLWNRAAIQGNAFARVKIGDYHYYGYGTKKDYQTAATHYSIAANKYHN------- 587
Query: 282 AQVTDCLPEFIGRGMAMASFYHARCLQLGLGITRDETTAKHYYSKACRLNP 332
A A F A + GLGIT+D A+ Y A + +P
Sbjct: 588 ---------------AQAMFNLAYMYEHGLGITKDIHLARRLYDMAAQTSP 623
Score = 43.5 bits (101), Expect = 3e-04
Identities = 36/140 (25%), Positives = 60/140 (42%), Gaps = 6/140 (4%)
Query: 137 YNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPKASVKAQSMLGLYYSTKEPKELEKAFY 196
+ +G + ++ EEA L+ AAD GN KA K L + + + A
Sbjct: 111 FKMGIKVLQQSKSQKQKEEAYLLFAKAADMGNLKAMEKMAD--ALLFGNFGVQNITAAIQ 168
Query: 197 WHSEACGNGNLESQGALGLMYLYGQGIRQDTEAALQCLREAAERGNVYAQGNL-VEYYYK 255
+ G+ ++Q ALG + YG G+ D AL + GN+ +Q L Y
Sbjct: 169 LYESLAKEGSCKAQNALGFLSSYGIGMEYDQAKALIYYTFGSAGGNMMSQMILGYRYLSG 228
Query: 256 MKFFTKC---VAFSKRIADY 272
+ C +++ K++ADY
Sbjct: 229 INVLQNCEVALSYYKKVADY 248
>gi|217330658 hypothetical protein LOC9812 [Homo sapiens]
Length = 515
Score = 53.9 bits (128), Expect = 2e-07
Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 16/222 (7%)
Query: 32 KEKTDYTHANLVDKALQLLKERILKGDTLAYFLRGQLYFEEGWYEEALEQFEEIKEKDH- 90
+++ D + +++A+ +++ ++A+ G + G + A F++ + +
Sbjct: 218 EKEQDKSKTLSLEEAVTSIQQLFQLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYS 277
Query: 91 QATYQLGVMYYDGLGTTLDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVK 150
+A Y G+ + G GT D K V Y + A A Y R
Sbjct: 278 KAQYNAGLCHEHGRGTPRDISKAVLYYQLA-------ASQGHSLAQYRYARCLLRDPASS 330
Query: 151 RSNEEAERLWLI--AADNGNPKASVKAQSMLGLYYSTKEPK-ELEKAFYWHSEACGNGNL 207
+ E + L+ AAD+G +A Q+ LG+ + TKEP + ++A + A NG+
Sbjct: 331 WNPERQRAVSLLKQAADSGLREA----QAFLGVLF-TKEPYLDEQRAVKYLWLAANNGDS 385
Query: 208 ESQGALGLMYLYGQGIRQDTEAALQCLREAAERGNVYAQGNL 249
+S+ LG+ Y G G++++ AL+C +++A GN AQ L
Sbjct: 386 QSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERL 427
Score = 32.3 bits (72), Expect = 0.64
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 108 LDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNG 167
LD ++ V Y+ ++ ++R Y+LG Y +G GV+R+ EA R + +A G
Sbjct: 367 LDEQRAVKYLWLAANNGDSQSR-------YHLGICYEKGLGVQRNLGEALRCYQQSAALG 419
Query: 168 NPKASVKAQSMLGLYYSTKEPKEL 191
N A + +++ + + P +L
Sbjct: 420 NEAAQERLRALFSMGAAAPGPSDL 443
>gi|217330656 hypothetical protein LOC9812 [Homo sapiens]
Length = 515
Score = 53.9 bits (128), Expect = 2e-07
Identities = 54/222 (24%), Positives = 102/222 (45%), Gaps = 16/222 (7%)
Query: 32 KEKTDYTHANLVDKALQLLKERILKGDTLAYFLRGQLYFEEGWYEEALEQFEEIKEKDH- 90
+++ D + +++A+ +++ ++A+ G + G + A F++ + +
Sbjct: 218 EKEQDKSKTLSLEEAVTSIQQLFQLSVSIAFNFLGTENMKSGDHTAAFSYFQKAAARGYS 277
Query: 91 QATYQLGVMYYDGLGTTLDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVK 150
+A Y G+ + G GT D K V Y + A A Y R
Sbjct: 278 KAQYNAGLCHEHGRGTPRDISKAVLYYQLA-------ASQGHSLAQYRYARCLLRDPASS 330
Query: 151 RSNEEAERLWLI--AADNGNPKASVKAQSMLGLYYSTKEPK-ELEKAFYWHSEACGNGNL 207
+ E + L+ AAD+G +A Q+ LG+ + TKEP + ++A + A NG+
Sbjct: 331 WNPERQRAVSLLKQAADSGLREA----QAFLGVLF-TKEPYLDEQRAVKYLWLAANNGDS 385
Query: 208 ESQGALGLMYLYGQGIRQDTEAALQCLREAAERGNVYAQGNL 249
+S+ LG+ Y G G++++ AL+C +++A GN AQ L
Sbjct: 386 QSRYHLGICYEKGLGVQRNLGEALRCYQQSAALGNEAAQERL 427
Score = 32.3 bits (72), Expect = 0.64
Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 7/84 (8%)
Query: 108 LDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNG 167
LD ++ V Y+ ++ ++R Y+LG Y +G GV+R+ EA R + +A G
Sbjct: 367 LDEQRAVKYLWLAANNGDSQSR-------YHLGICYEKGLGVQRNLGEALRCYQQSAALG 419
Query: 168 NPKASVKAQSMLGLYYSTKEPKEL 191
N A + +++ + + P +L
Sbjct: 420 NEAAQERLRALFSMGAAAPGPSDL 443
>gi|154689719 hypothetical protein LOC23231 [Homo sapiens]
Length = 1132
Score = 40.0 bits (92), Expect = 0.003
Identities = 61/271 (22%), Positives = 107/271 (39%), Gaps = 57/271 (21%)
Query: 90 HQATYQLGVMYYDGLGTTLDAEKGVDYM------KKILDSPCPKARHLK----FAAAYNL 139
H+A+Y L V Y GL D +G+ Y + L S +H + + + L
Sbjct: 570 HKASYYLAVFYETGLNVPRDQLQGMLYSLVGGQGSERLSSMNLGYKHYQGIDNYPLDWEL 629
Query: 140 GRAYYEGKGVK----------------------------RSNEEAER-LWLI-AADNGNP 169
AYY K ++ E+ + +WL A GN
Sbjct: 630 SYAYYSNIATKTPLDQHTLQGDQAYVETIRLKDDEILKVQTKEDGDVFMWLKHEATRGNA 689
Query: 170 KASVKAQSMLGLYYSTKEPKELEKAFYWHSEACGNGNLESQGALGLMYLY------GQGI 223
A + ML + K E A W+++ G LE++ L+Y Y GQG+
Sbjct: 690 AAQQRLAQML-FWGQQGVAKNPEAAIEWYAK----GALETEDP-ALIYDYAIVLFKGQGV 743
Query: 224 RQDTEAALQCLREAAERGNVYAQGNLVEYYYKM-KFFTKCVAF---SKRIADYDEVHDIP 279
+++ AL+ +++AA +G A L YY+K K + K + ++ + + D +++
Sbjct: 744 KKNRRLALELMKKAASKGLHQAVNGLGWYYHKFKKNYAKAAKYWLKAEEMGNPDASYNLG 803
Query: 280 MIAQVTDCLPEFIGRGMAMASFYHARCLQLG 310
++ + P GR +A Y + Q G
Sbjct: 804 VL-HLDGIFPGVPGRNQTLAGEYFHKAAQGG 833
Score = 39.7 bits (91), Expect = 0.004
Identities = 51/213 (23%), Positives = 91/213 (42%), Gaps = 26/213 (12%)
Query: 50 LKERILKGDTLAYFLRGQLYF--EEGWY---EEALEQFEE--IKEKDHQATYQLGVMYYD 102
LK +G+ A Q+ F ++G E A+E + + ++ +D Y ++ +
Sbjct: 680 LKHEATRGNAAAQQRLAQMLFWGQQGVAKNPEAAIEWYAKGALETEDPALIYDYAIVLFK 739
Query: 103 GLGTTLDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLI 162
G G + ++ MKK K H A LG Y++ K++ +A + WL
Sbjct: 740 GQGVKKNRRLALELMKKAAS----KGLH---QAVNGLGWYYHK---FKKNYAKAAKYWLK 789
Query: 163 AADNGNPKAS--VKAQSMLGLYYSTKEPKELEKAFYWHSEACGNGNLESQGALGLMYLYG 220
A + GNP AS + + G++ + Y+H A G G++E L Y+ G
Sbjct: 790 AEEMGNPDASYNLGVLHLDGIFPGVPGRNQTLAGEYFHKAAQG-GHMEGTLWCSLYYITG 848
Query: 221 --QGIRQDTEAALQCLREAAER----GNVYAQG 247
+ +D E A+ + AE+ G+V +G
Sbjct: 849 NLETFPRDPEKAVVWAKHVAEKNGYLGHVIRKG 881
>gi|12751491 hypothetical protein LOC65260 [Homo sapiens]
Length = 231
Score = 37.7 bits (86), Expect = 0.015
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 9/159 (5%)
Query: 86 KEKDHQ-ATYQLGVMYYDGLGTTLDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYY 144
+E H + Y+LG Y G G K + C K AA +N+G +
Sbjct: 63 EENQHSDSCYKLGAHYVTGKGGLTQDLKAA---ARCFLMACEKPGKKSIAACHNVGLLAH 119
Query: 145 EGKGVKRSNEE---AERLWLIAADNGNPKASVKAQSMLGLYYSTKEPKELEKAFYWHSEA 201
+G+ + + A + A D G + +M L + PK+++ A + +A
Sbjct: 120 DGQVNEDGQPDLGKARDYYTRACDGGYTSSCFNLSAMF-LQGAPGFPKDMDLACKYSMKA 178
Query: 202 CGNGNLESQGALGLMYLYGQGIRQDTEAALQCLREAAER 240
C G++ + MY G G+ +D EA + L+ A++
Sbjct: 179 CDLGHIWACANASRMYKLGDGVDKD-EAKAEVLKNRAQQ 216
>gi|115430239 spectrin, beta, non-erythrocytic 4 isoform sigma5
[Homo sapiens]
Length = 678
Score = 33.5 bits (75), Expect = 0.29
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 23/145 (15%)
Query: 61 AYFLRGQLYFE----EGWY-EEALEQFEEIKEKDHQATYQLGVMYYDGLGTTLDAEKGVD 115
A F Q YF+ E W E+ L E K KD Q+T QL L L E+GV+
Sbjct: 295 AAFQVEQYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQL-------LKKHLQLEQGVE 347
Query: 116 YMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPKASVKA 175
++ + + R L L + + + + R + +RL++ + G + V
Sbjct: 348 NYEESIAQLSRQCRAL-------LEMGHPDSEQISRRQSQVDRLYVALKELGEER-RVAL 399
Query: 176 QSMLGLYYSTKEPKELEKAFYWHSE 200
+ LY +++ ELE +W +E
Sbjct: 400 EQQYWLYQLSRQVSELE---HWIAE 421
>gi|115430237 spectrin, beta, non-erythrocytic 4 isoform sigma1 [Homo
sapiens]
Length = 2564
Score = 33.5 bits (75), Expect = 0.29
Identities = 37/145 (25%), Positives = 62/145 (42%), Gaps = 23/145 (15%)
Query: 61 AYFLRGQLYFE----EGWY-EEALEQFEEIKEKDHQATYQLGVMYYDGLGTTLDAEKGVD 115
A F Q YF+ E W E+ L E K KD Q+T QL L L E+GV+
Sbjct: 1619 AAFQVEQYYFDVAEVEAWLGEQELLMMSEDKGKDEQSTLQL-------LKKHLQLEQGVE 1671
Query: 116 YMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPKASVKA 175
++ + + R L L + + + + R + +RL++ + G + V
Sbjct: 1672 NYEESIAQLSRQCRAL-------LEMGHPDSEQISRRQSQVDRLYVALKELGEER-RVAL 1723
Query: 176 QSMLGLYYSTKEPKELEKAFYWHSE 200
+ LY +++ ELE +W +E
Sbjct: 1724 EQQYWLYQLSRQVSELE---HWIAE 1745
>gi|170784869 tetratricopeptide repeat domain 13 isoform b [Homo
sapiens]
Length = 807
Score = 33.1 bits (74), Expect = 0.38
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 23 KNQKFFQWKKEKTDYTHANLVDKALQLLKERIL-KGDTL-AYFLRGQLYFEEGWYEEALE 80
KNQ K T + H L+ +A++ KE + K D + AY GQ Y E G +E A E
Sbjct: 227 KNQPIAMLYKGLT-FFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATE 285
Query: 81 QFEE--IKEKDHQATYQL-GVMYY 101
F++ + ++H T QL G+M Y
Sbjct: 286 SFQKALLLNQNHVQTLQLRGMMLY 309
>gi|170784867 tetratricopeptide repeat domain 13 isoform a [Homo
sapiens]
Length = 860
Score = 33.1 bits (74), Expect = 0.38
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 23 KNQKFFQWKKEKTDYTHANLVDKALQLLKERIL-KGDTL-AYFLRGQLYFEEGWYEEALE 80
KNQ K T + H L+ +A++ KE + K D + AY GQ Y E G +E A E
Sbjct: 280 KNQPIAMLYKGLT-FFHRGLLKEAIESFKEALKQKVDFIDAYKSLGQAYRELGNFEAATE 338
Query: 81 QFEE--IKEKDHQATYQL-GVMYY 101
F++ + ++H T QL G+M Y
Sbjct: 339 SFQKALLLNQNHVQTLQLRGMMLY 362
>gi|28558993 intraflagellar transport 88 homolog isoform 1 [Homo
sapiens]
Length = 833
Score = 33.1 bits (74), Expect = 0.38
Identities = 55/225 (24%), Positives = 85/225 (37%), Gaps = 38/225 (16%)
Query: 35 TDYTHANLVDKALQLLKERILKGDTLAYFLRGQLYFEEGWYEEALEQFEEIKEKDHQATY 94
+D H NLV +A+ K D L R + E + + + + E A Y
Sbjct: 356 SDDPHTNLVTEAI--------KNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGY 407
Query: 95 QLGV-----MYYDGLGTTLDAEKGVDYMKK--------ILDSPCPKARHLKFAAAYNLGR 141
V Y L L+ K V Y+++ IL K +K AAA NL
Sbjct: 408 DWCVEVVKASQYVELANDLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSA 467
Query: 142 AYYEGKGVKRSNEEAERLWLIAADNGNPKASVKAQSMLGLYYSTKEPKELEKAFYWHSEA 201
YY GK +++ A+ + +D NP A + + + EKA ++ EA
Sbjct: 468 LYYMGKDFAQASSYAD--IAVNSDRYNPAALTNKGN------TVFANGDYEKAAEFYKEA 519
Query: 202 CGNGNLESQGALGLMYLYGQGIRQDTEAALQC-------LREAAE 239
N + ++ + Y + R D AL C LR +AE
Sbjct: 520 LRNDSSCTEALYNIGLTYEKLNRLD--EALDCFLKLHAILRNSAE 562
>gi|28329439 intraflagellar transport 88 homolog isoform 2 [Homo
sapiens]
Length = 824
Score = 33.1 bits (74), Expect = 0.38
Identities = 55/225 (24%), Positives = 85/225 (37%), Gaps = 38/225 (16%)
Query: 35 TDYTHANLVDKALQLLKERILKGDTLAYFLRGQLYFEEGWYEEALEQFEEIKEKDHQATY 94
+D H NLV +A+ K D L R + E + + + + E A Y
Sbjct: 347 SDDPHTNLVTEAI--------KNDHLRQMERERKAMAEKYIMTSAKLIAPVIETSFAAGY 398
Query: 95 QLGV-----MYYDGLGTTLDAEKGVDYMKK--------ILDSPCPKARHLKFAAAYNLGR 141
V Y L L+ K V Y+++ IL K +K AAA NL
Sbjct: 399 DWCVEVVKASQYVELANDLEINKAVTYLRQKDYNQAVEILKVLEKKDSRVKSAAATNLSA 458
Query: 142 AYYEGKGVKRSNEEAERLWLIAADNGNPKASVKAQSMLGLYYSTKEPKELEKAFYWHSEA 201
YY GK +++ A+ + +D NP A + + + EKA ++ EA
Sbjct: 459 LYYMGKDFAQASSYAD--IAVNSDRYNPAALTNKGN------TVFANGDYEKAAEFYKEA 510
Query: 202 CGNGNLESQGALGLMYLYGQGIRQDTEAALQC-------LREAAE 239
N + ++ + Y + R D AL C LR +AE
Sbjct: 511 LRNDSSCTEALYNIGLTYEKLNRLD--EALDCFLKLHAILRNSAE 553
>gi|239756104 PREDICTED: tetratricopeptide repeat domain 6 [Homo
sapiens]
Length = 1614
Score = 32.7 bits (73), Expect = 0.49
Identities = 62/250 (24%), Positives = 97/250 (38%), Gaps = 35/250 (14%)
Query: 59 TLAYFLRGQLYFE-EGWYEEALEQFEEIKEKDHQ-----ATYQLGVMYYDGLGTTLDAEK 112
T A RG Y E E W+ A+E F + DHQ Y L + YYD T+
Sbjct: 1052 TDALLKRGLFYCENENWF-AAIEDFTALLNIDHQNSQARGQYLLMMKYYDLAKFTI---Y 1107
Query: 113 GVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPKAS 172
+ M K L P + L ++ N +A G+ + E L+A K
Sbjct: 1108 QIAEMDKGLSELSPMQQALIYSFCENHDKAIEVLDGISWNRAEMTMCALLA------KVQ 1161
Query: 173 VKAQSMLGLYYSTKEPKE-LEKAFYWHSEACGNGNLESQGA-----LGLMYLYGQGIRQD 226
+KA+ TKE E L+KA S + + + A LGL Y+ ++
Sbjct: 1162 MKAK-------RTKEAVEVLKKALDASSHSDKGPDATTISADCLYNLGLCYMEEGNLQMT 1214
Query: 227 TEAALQCLREAAERGNVYAQGNLVEYYYKMKFFTKCVAFSKRIADYDEVHDIPMIAQVTD 286
+ A+ L A + + + +Y + +TK + DY V + + A T
Sbjct: 1215 YKLAITDLTTAISMD----KNSYIAFYNRALCYTKIRELQMALTDYGIV--LLLDATETV 1268
Query: 287 CLPEFIGRGM 296
L F+ RG+
Sbjct: 1269 KLNTFLNRGL 1278
>gi|239750633 PREDICTED: tetratricopeptide repeat domain 6 [Homo
sapiens]
Length = 1614
Score = 32.7 bits (73), Expect = 0.49
Identities = 63/250 (25%), Positives = 97/250 (38%), Gaps = 35/250 (14%)
Query: 59 TLAYFLRGQLYFE-EGWYEEALEQFEEIKEKDHQ-----ATYQLGVMYYDGLGTTLDAEK 112
T A RG Y E E W+ A+E F + DHQ Y L + YYD T+
Sbjct: 1052 TDALLKRGLFYCENENWF-AAIEDFTALLNIDHQNSQARGQYLLMMKYYDLAKFTI---Y 1107
Query: 113 GVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPKAS 172
+ M K L P + L ++ N +A G+ + E L+A K
Sbjct: 1108 QIAEMDKGLSELSPMQQALIYSFCENHDKAIEVLDGISWNRAEMTMCALLA------KVQ 1161
Query: 173 VKAQSMLGLYYSTKEPKE-LEKAF--YWHSEACGNGNLESQGA---LGLMYLYGQGIRQD 226
+KA+ TKE E L+KA HS+ + S LGL Y+ ++
Sbjct: 1162 MKAK-------RTKEAVEVLKKALDAISHSDKGPDATAISADCLYNLGLCYMEEGNLQMT 1214
Query: 227 TEAALQCLREAAERGNVYAQGNLVEYYYKMKFFTKCVAFSKRIADYDEVHDIPMIAQVTD 286
+ A+ L A + + + +Y + +TK + DY V + + A T
Sbjct: 1215 YKLAITDLTTAISMD----KNSYIAFYNRALCYTKIRELQMALTDYGIV--LLLDATETV 1268
Query: 287 CLPEFIGRGM 296
L F+ RG+
Sbjct: 1269 KLNTFLNRGL 1278
>gi|117553586 dedicator of cytokinesis 5 [Homo sapiens]
Length = 1870
Score = 32.0 bits (71), Expect = 0.84
Identities = 32/122 (26%), Positives = 61/122 (50%), Gaps = 27/122 (22%)
Query: 48 QLLKERILKGDTLAYFLRGQLYFEEGWYEEALEQFEEIKEKDHQATYQLGVMYYDGLGTT 107
Q LKE++ + + ++YF +G+++ E+A++ +E+ E TY+ V Y+GLG
Sbjct: 1294 QELKEKLYQ-EIISYFDKGKMW------EKAIKLSKELAE-----TYESKVFDYEGLGNL 1341
Query: 108 LDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAY----------YEGKGVKRSNEEAE 157
L +K + + I+ + P+ + FA Y G+ + Y GK +R + +
Sbjct: 1342 L--KKRASFYENIIKAMRPQPEY--FAVGY-YGQGFPSFLRNKIFIYRGKEYERREDFSL 1396
Query: 158 RL 159
RL
Sbjct: 1397 RL 1398
>gi|224028289 tetratricopeptide repeat domain 28 [Homo sapiens]
Length = 2481
Score = 31.6 bits (70), Expect = 1.1
Identities = 40/155 (25%), Positives = 63/155 (40%), Gaps = 20/155 (12%)
Query: 57 GDTLAYFLRGQLYFEEGWYEEALEQFEE-----IKEKDHQATYQ----LGVMYYDGLG-- 105
G+ A+ G +F +G Y EAL +K KD +A LG +Y +G
Sbjct: 272 GECRAHGNLGSAFFSKGNYREALTNHRHQLVLAMKLKDREAASSALSSLGHVY-TAIGDY 330
Query: 106 -TTLDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAA 164
L + K + K +AR L N+G Y + + + E+ IA
Sbjct: 331 PNALASHKQCVLLAKQSKDELSEARELG-----NMGAVYIAMGDFENAVQCHEQHLKIAK 385
Query: 165 DNGNPKASVKAQSMLGLYYSTKEPKELEKAFYWHS 199
D GN + +A S LG Y + + +KA +H+
Sbjct: 386 DLGNKREEARAYSNLGSAYHYR--RNFDKAMSYHN 418
>gi|239744942 PREDICTED: chromosome 14 open reading frame 25 [Homo
sapiens]
Length = 1614
Score = 31.6 bits (70), Expect = 1.1
Identities = 63/250 (25%), Positives = 96/250 (38%), Gaps = 35/250 (14%)
Query: 59 TLAYFLRGQLYFE-EGWYEEALEQFEEIKEKDHQ-----ATYQLGVMYYDGLGTTLDAEK 112
T A RG Y E E W+ A+E F + DHQ Y L + YYD T+
Sbjct: 1052 TDALLKRGLFYCENENWF-AAIEDFTALLNIDHQNSQARGQYLLMMKYYDLAKFTI---Y 1107
Query: 113 GVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGKGVKRSNEEAERLWLIAADNGNPKAS 172
+ M K L P + L ++ N +A G+ + E L+A K
Sbjct: 1108 QIAEMDKGLSELSPMQQALIYSFCENHDKAIEVLDGISWNRAEMTMCALLA------KVQ 1161
Query: 173 VKAQSMLGLYYSTKEPKE-LEKAF--YWHSEACGNGNLESQGA---LGLMYLYGQGIRQD 226
+KA+ TKE E L+KA HS+ + S LGL Y+ ++
Sbjct: 1162 MKAK-------RTKEAVEVLKKALDAISHSDKGPDATAISADCLYNLGLCYMEEGNLQMT 1214
Query: 227 TEAALQCLREAAERGNVYAQGNLVEYYYKMKFFTKCVAFSKRIADYDEVHDIPMIAQVTD 286
+ A+ L A + + +Y + +TK + DY V + + A T
Sbjct: 1215 YKLAITDLTTAISMD----KNSYTAFYNRALCYTKIRELQMALTDYGIV--LLLDATETV 1268
Query: 287 CLPEFIGRGM 296
L F+ RG+
Sbjct: 1269 KLNTFLNRGL 1278
>gi|62241003 cardiomyopathy associated 5 [Homo sapiens]
Length = 4069
Score = 30.8 bits (68), Expect = 1.9
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 17 VSQYAAKNQKFFQWKKEKTDYTHANLVDKALQLLKERILKGDTLAYFLRGQLYFEEGWYE 76
++QY K Q F + KK+K ++ H +V L+ DTL +R +E +
Sbjct: 3600 LAQYDEKAQSFEEVKKKKMEFLHEQMV----HFLQSMDTAKDTLETIVREAEELDEAVF- 3654
Query: 77 EALEQFEEIKEK 88
L FEEI E+
Sbjct: 3655 --LTSFEEINER 3664
>gi|221219056 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 2
[Homo sapiens]
Length = 438
Score = 30.4 bits (67), Expect = 2.4
Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 35/189 (18%)
Query: 43 VDKALQLLKERILKGDTL--AYFLRGQLYFEEGWYEEALEQFEEI----KEKDHQATYQL 96
+D A++ + DT AY R Q Y + YEEA+ +E++ K K+H+ +
Sbjct: 254 LDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQTEKTKEHKQLLKN 313
Query: 97 GVM---------YYDGLGTTLDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGK 147
+ YY LG +D D +KK + R L + G + K
Sbjct: 314 AQLELKKSKRKDYYKILG--VDKNASEDEIKKAY-----RKRALMHHPDRHSGASAEVQK 366
Query: 148 GVKRSNEEAERLWLIAADNGNPKASVKAQS-----MLGLYYSTKEPKELEKAFY-----W 197
++ +E + I +D PK + S G+ +P + KAF+ +
Sbjct: 367 EEEKKFKEVGEAFTILSD---PKKKTRYDSGQDLDEEGMNMGDFDPNNIFKAFFGGPGGF 423
Query: 198 HSEACGNGN 206
EA G GN
Sbjct: 424 SFEASGPGN 432
>gi|221219053 DnaJ (Hsp40) homolog, subfamily C, member 7 isoform 1
[Homo sapiens]
Length = 494
Score = 30.4 bits (67), Expect = 2.4
Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 35/189 (18%)
Query: 43 VDKALQLLKERILKGDTL--AYFLRGQLYFEEGWYEEALEQFEEI----KEKDHQATYQL 96
+D A++ + DT AY R Q Y + YEEA+ +E++ K K+H+ +
Sbjct: 310 LDDAIEDCTNAVKLDDTYIKAYLRRAQCYMDTEQYEEAVRDYEKVYQTEKTKEHKQLLKN 369
Query: 97 GVM---------YYDGLGTTLDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGK 147
+ YY LG +D D +KK + R L + G + K
Sbjct: 370 AQLELRKSKRKDYYKILG--VDKNASEDEIKKAY-----RKRALMHHPDRHSGASAEVQK 422
Query: 148 GVKRSNEEAERLWLIAADNGNPKASVKAQS-----MLGLYYSTKEPKELEKAFY-----W 197
++ +E + I +D PK + S G+ +P + KAF+ +
Sbjct: 423 EEEKKFKEVGEAFTILSD---PKKKTRYDSGQDLDEEGMNMGDFDPNNIFKAFFGGPGGF 479
Query: 198 HSEACGNGN 206
EA G GN
Sbjct: 480 SFEASGPGN 488
>gi|93102364 SWAP-70 protein [Homo sapiens]
Length = 585
Score = 30.0 bits (66), Expect = 3.2
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 17 VSQYAAKNQKFFQWKKEKTDYTHANLVDKALQLLKERILKGDTLAYFLRGQLYFEEGWYE 76
+ + ++K + +W E+ +K +L +R+LK L + QL E +
Sbjct: 454 LEEESSKRAELEKWHLEQQQAIQTTEAEKQ-ELENQRVLKEQALQEAME-QLEQLELERK 511
Query: 77 EALEQFEEIKEKDHQAT 93
+ALEQ+EE+K+K AT
Sbjct: 512 QALEQYEEVKKKLEMAT 528
>gi|57164948 solute carrier family 30 (zinc transporter), member 9
[Homo sapiens]
Length = 568
Score = 30.0 bits (66), Expect = 3.2
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 69 YFEEGWYEEALEQFEEIKEKDHQATYQLGVMYYDGLGTTLDAEKGVDYMKKILDSPCPKA 128
Y E+ +++ L++ +E+K + T+ L + + + TL AE VD ++K L P+
Sbjct: 505 YLEKQDFDQMLQEIQEVKTPEELETFML--KHGENIIDTLGAE--VDRLEKELKKRNPEV 560
Query: 129 RHL 131
RH+
Sbjct: 561 RHV 563
>gi|11036654 protocadherin beta 13 precursor [Homo sapiens]
Length = 798
Score = 30.0 bits (66), Expect = 3.2
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Query: 140 GRAYYE---GKGVKRSNEEAERLWLIAADNGNPKASVKAQSMLGLYYSTKEPKELEKAFY 196
GR Y E K + R E RL L A D G+P S AQ + + E E+ FY
Sbjct: 189 GRKYPELVLDKALDREEEAELRLTLTALDGGSPPRSGTAQVYIEVLDVNDNAPEFEQPFY 248
>gi|7662078 tetratricopeptide repeat domain 37 [Homo sapiens]
Length = 1564
Score = 29.3 bits (64), Expect = 5.4
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 7/82 (8%)
Query: 80 EQFEEIKEKDH-QATYQLGVMYYDGLGTTLDAEKGVDYMKKILDSPCPKARHLKFAAAYN 138
E++ I KD YQ + Y+ ++D +K D KK++D + +HL+ A ++
Sbjct: 85 EKYNHINAKDDLPGVYQKLLDLYE----SVDKQKWCDVCKKLVDLYYQEKKHLEVARTWH 140
Query: 139 LGRAYYEGKGVKRSNEEAERLW 160
+ +G + NEE +LW
Sbjct: 141 KLIKTRQEQGAE--NEELHQLW 160
>gi|157419126 laminin, alpha 4 isoform 2 precursor [Homo sapiens]
Length = 1816
Score = 28.9 bits (63), Expect = 7.1
Identities = 18/86 (20%), Positives = 41/86 (47%)
Query: 37 YTHANLVDKALQLLKERILKGDTLAYFLRGQLYFEEGWYEEALEQFEEIKEKDHQATYQL 96
+ H N ++ + LLK ++ + + + Q+ E + L EE+ EK++QA+ +
Sbjct: 301 HRHVNEINATIYLLKTKLSERENQYALRKIQINNAENTMKSLLSDVEELVEKENQASRKG 360
Query: 97 GVMYYDGLGTTLDAEKGVDYMKKILD 122
++ + + T A + V+ + D
Sbjct: 361 QLVQKESMDTINHASQLVEQAHDMRD 386
>gi|157419124 laminin, alpha 4 isoform 1 precursor [Homo sapiens]
Length = 1823
Score = 28.9 bits (63), Expect = 7.1
Identities = 18/86 (20%), Positives = 41/86 (47%)
Query: 37 YTHANLVDKALQLLKERILKGDTLAYFLRGQLYFEEGWYEEALEQFEEIKEKDHQATYQL 96
+ H N ++ + LLK ++ + + + Q+ E + L EE+ EK++QA+ +
Sbjct: 308 HRHVNEINATIYLLKTKLSERENQYALRKIQINNAENTMKSLLSDVEELVEKENQASRKG 367
Query: 97 GVMYYDGLGTTLDAEKGVDYMKKILD 122
++ + + T A + V+ + D
Sbjct: 368 QLVQKESMDTINHASQLVEQAHDMRD 393
>gi|157419122 laminin, alpha 4 isoform 2 precursor [Homo sapiens]
Length = 1816
Score = 28.9 bits (63), Expect = 7.1
Identities = 18/86 (20%), Positives = 41/86 (47%)
Query: 37 YTHANLVDKALQLLKERILKGDTLAYFLRGQLYFEEGWYEEALEQFEEIKEKDHQATYQL 96
+ H N ++ + LLK ++ + + + Q+ E + L EE+ EK++QA+ +
Sbjct: 301 HRHVNEINATIYLLKTKLSERENQYALRKIQINNAENTMKSLLSDVEELVEKENQASRKG 360
Query: 97 GVMYYDGLGTTLDAEKGVDYMKKILD 122
++ + + T A + V+ + D
Sbjct: 361 QLVQKESMDTINHASQLVEQAHDMRD 386
>gi|22749211 transmembrane and tetratricopeptide repeat containing 2
[Homo sapiens]
Length = 836
Score = 28.9 bits (63), Expect = 7.1
Identities = 12/23 (52%), Positives = 17/23 (73%)
Query: 66 GQLYFEEGWYEEALEQFEEIKEK 88
G+LY E+G YEEAL ++E +K
Sbjct: 613 GKLYHEQGHYEEALSVYKEAIQK 635
>gi|71040096 Rho GTPase activating protein 30 isoform 2 [Homo
sapiens]
Length = 890
Score = 28.9 bits (63), Expect = 7.1
Identities = 21/92 (22%), Positives = 41/92 (44%), Gaps = 4/92 (4%)
Query: 89 DHQATYQLGVMYYDGLGTTLDAEKGVDYMKKILDSPCPKARHLKFAAAYNLGRAYYEGKG 148
D TY+L + + +G L+ E+ V ++ + + P P R L+F + + A +
Sbjct: 103 DPLLTYRLYDKFAEAVGVQLEPERLVKILEVLRELPVPNYRTLEFLMRHLVHMASFSA-- 160
Query: 149 VKRSNEEAERLWLIAADNGNPKASVKAQSMLG 180
++N A L ++ A N ++A G
Sbjct: 161 --QTNMHARNLAIVWAPNLLRSKDIEASGFNG 190
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,562,551
Number of Sequences: 37866
Number of extensions: 534795
Number of successful extensions: 1391
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 20
Number of HSP's that attempted gapping in prelim test: 1323
Number of HSP's gapped (non-prelim): 71
length of query: 347
length of database: 18,247,518
effective HSP length: 103
effective length of query: 244
effective length of database: 14,347,320
effective search space: 3500746080
effective search space used: 3500746080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.