Search of human proteins with 33519458

Search of human proteins with 33519458

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|33519458 myeloid cell leukemia sequence 1 isoform 2 [Homo
sapiens]
         (271 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|33519458 myeloid cell leukemia sequence 1 isoform 2 [Homo sap...   554   e-158
gi|11386165 myeloid cell leukemia sequence 1 isoform 1 [Homo sap...   456   e-129
gi|5730045 solute carrier family 16, member 2 [Homo sapiens]           43   3e-04
gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sap...    42   6e-04
gi|112734870 hypothetical protein LOC57648 [Homo sapiens]              41   0.001
gi|78042577 MAP7 domain containing 1 [Homo sapiens]                    39   0.004
gi|126352608 elastin isoform e precursor [Homo sapiens]                39   0.006
gi|126352446 elastin isoform d precursor [Homo sapiens]                39   0.006
gi|126352322 elastin isoform c precursor [Homo sapiens]                39   0.006
gi|126352440 elastin isoform a precursor [Homo sapiens]                39   0.006
gi|61097912 nucleolar protein with MIF4G domain 1 [Homo sapiens]       37   0.014
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]            37   0.018
gi|157785645 SPEG complex locus [Homo sapiens]                         37   0.018
gi|157743252 pecanex-like 3 [Homo sapiens]                             37   0.024
gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]     37   0.024
gi|110347449 POU domain, class 4, transcription factor 1 [Homo s...    36   0.031
gi|224586851 sorbin and SH3 domain containing 2 isoform 6 [Homo ...    36   0.041
gi|224586846 sorbin and SH3 domain containing 2 isoform 4 [Homo ...    36   0.041
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]         36   0.041
gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens]                       36   0.041
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap...    35   0.053
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap...    35   0.053
gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]        35   0.053
gi|188497630 hypothetical protein LOC55571 [Homo sapiens]              35   0.053
gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo s...    35   0.069
gi|5174467 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3...    35   0.069
gi|192807323 SWI/SNF-related matrix-associated actin-dependent r...    35   0.091
gi|192807320 SWI/SNF-related matrix-associated actin-dependent r...    35   0.091
gi|192807318 SWI/SNF-related matrix-associated actin-dependent r...    35   0.091
gi|192807316 SWI/SNF-related matrix-associated actin-dependent r...    35   0.091

>gi|33519458 myeloid cell leukemia sequence 1 isoform 2 [Homo
           sapiens]
          Length = 271

 Score =  554 bits (1428), Expect = e-158
 Identities = 271/271 (100%), Positives = 271/271 (100%)

Query: 1   MFGLKRNAVIGLNLYCGGAGLGAGSGGATRPGGRLLATEKEASARREIGGGEAGAVIGGS 60
           MFGLKRNAVIGLNLYCGGAGLGAGSGGATRPGGRLLATEKEASARREIGGGEAGAVIGGS
Sbjct: 1   MFGLKRNAVIGLNLYCGGAGLGAGSGGATRPGGRLLATEKEASARREIGGGEAGAVIGGS 60

Query: 61  AGASPPSTLTPDSRRVARPPPIGAEVPDVTATPARLLFFAPTRRAAPLEEMEAPAADAIM 120
           AGASPPSTLTPDSRRVARPPPIGAEVPDVTATPARLLFFAPTRRAAPLEEMEAPAADAIM
Sbjct: 61  AGASPPSTLTPDSRRVARPPPIGAEVPDVTATPARLLFFAPTRRAAPLEEMEAPAADAIM 120

Query: 121 SPEEELDGYEPEPLGKRPAVLPLLELVGESGNNTSTDGSLPSTPPPAEEEEDELYRQSLE 180
           SPEEELDGYEPEPLGKRPAVLPLLELVGESGNNTSTDGSLPSTPPPAEEEEDELYRQSLE
Sbjct: 121 SPEEELDGYEPEPLGKRPAVLPLLELVGESGNNTSTDGSLPSTPPPAEEEEDELYRQSLE 180

Query: 181 IISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGWVCGVLPCRG 240
           IISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGWVCGVLPCRG
Sbjct: 181 IISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQGWVCGVLPCRG 240

Query: 241 PRRWHQECAAGFCRCCWSRSWFGISNKIALL 271
           PRRWHQECAAGFCRCCWSRSWFGISNKIALL
Sbjct: 241 PRRWHQECAAGFCRCCWSRSWFGISNKIALL 271


>gi|11386165 myeloid cell leukemia sequence 1 isoform 1 [Homo
           sapiens]
          Length = 350

 Score =  456 bits (1174), Expect = e-129
 Identities = 230/230 (100%), Positives = 230/230 (100%)

Query: 1   MFGLKRNAVIGLNLYCGGAGLGAGSGGATRPGGRLLATEKEASARREIGGGEAGAVIGGS 60
           MFGLKRNAVIGLNLYCGGAGLGAGSGGATRPGGRLLATEKEASARREIGGGEAGAVIGGS
Sbjct: 1   MFGLKRNAVIGLNLYCGGAGLGAGSGGATRPGGRLLATEKEASARREIGGGEAGAVIGGS 60

Query: 61  AGASPPSTLTPDSRRVARPPPIGAEVPDVTATPARLLFFAPTRRAAPLEEMEAPAADAIM 120
           AGASPPSTLTPDSRRVARPPPIGAEVPDVTATPARLLFFAPTRRAAPLEEMEAPAADAIM
Sbjct: 61  AGASPPSTLTPDSRRVARPPPIGAEVPDVTATPARLLFFAPTRRAAPLEEMEAPAADAIM 120

Query: 121 SPEEELDGYEPEPLGKRPAVLPLLELVGESGNNTSTDGSLPSTPPPAEEEEDELYRQSLE 180
           SPEEELDGYEPEPLGKRPAVLPLLELVGESGNNTSTDGSLPSTPPPAEEEEDELYRQSLE
Sbjct: 121 SPEEELDGYEPEPLGKRPAVLPLLELVGESGNNTSTDGSLPSTPPPAEEEEDELYRQSLE 180

Query: 181 IISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQG 230
           IISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQG
Sbjct: 181 IISRYLREQATGAKDTKPMGRSGATSRKALETLRRVGDGVQRNHETAFQG 230


>gi|5730045 solute carrier family 16, member 2 [Homo sapiens]
          Length = 613

 Score = 43.1 bits (100), Expect = 3e-04
 Identities = 40/120 (33%), Positives = 56/120 (46%), Gaps = 13/120 (10%)

Query: 17  GGAGLGAGSGGATRPGGR-LLATEKEASARREIGGGEAGAVIGGSAGASPPSTLTPDSRR 75
           GG GL  G GG    G R  L+ +  AS   E GGG +G     S  +SPPS+ +  SR 
Sbjct: 4   GGGGLDVGGGGE---GSRDRLSRDGLASWGAEPGGGGSG-----SGSSSPPSSSSCSSRN 55

Query: 76  VARPPPIGAEVPDVTATPARLLFFAPTRRAA--PLEEMEAPAADAIMSPEEELDGYEPEP 133
             +P   G+  P   + PA +   +     A  P +E +    + + SPE E +  EPEP
Sbjct: 56  KYQPQS-GSSGPSSHSPPAAMALQSQASEEAKGPWQEADQEQQEPVGSPEPESEP-EPEP 113


>gi|122937241 SH3 and multiple ankyrin repeat domains 3 [Homo sapiens]
          Length = 1747

 Score = 42.0 bits (97), Expect = 6e-04
 Identities = 58/210 (27%), Positives = 81/210 (38%), Gaps = 26/210 (12%)

Query: 19   AGLGAGSGGATRPG---GRLLATEKEASARREIGGGEAGAVIGGSAGASPPSTLTPDSRR 75
            A LGAG+ G   PG   G L   E++  AR  I   ++    G +    PP   TP  R 
Sbjct: 877  ARLGAGAAGLYEPGAALGPLPYPERQKRARSMIILQDSAPESGDAP--RPPPAATPPERP 934

Query: 76   VARPPPIGAEVPDVTATPARLLFFAPT---RRAAPL------EEMEAPAADAIMSPEEEL 126
              RP P G + P           FAP+   RR +PL      E+ +  AA A+ SP    
Sbjct: 935  KRRPRPPGPDSPYANLGAFSASLFAPSKPQRRKSPLVKQLQVEDAQERAALAVGSPGPGG 994

Query: 127  DGYEPEP----LGKRPAVLPLLELVGESGNNTSTDGSLPSTPPPAEEEEDELYRQSLEII 182
              +  EP     G RP     L+     G   +  G     P PA++   E  R+S   +
Sbjct: 995  GSFAREPSPTHRGPRPGG---LDYGAGDGPGLAFGG-----PGPAKDRRLEERRRSTVFL 1046

Query: 183  SRYLREQATGAKDTKPMGRSGATSRKALET 212
            S    E +    D   +  S +   + L T
Sbjct: 1047 SVGAIEGSAPGADLPSLQPSRSIDERLLGT 1076



 Score = 28.5 bits (62), Expect = 6.5
 Identities = 20/67 (29%), Positives = 25/67 (37%), Gaps = 6/67 (8%)

Query: 20   GLGAGSGGATRPGGRLLATE------KEASARREIGGGEAGAVIGGSAGASPPSTLTPDS 73
            G G G+  + RP GR           K AS  R  G G      G   G +PP+ L   S
Sbjct: 1570 GPGGGASYSVRPSGRYPVARRAPSPVKPASLERVEGLGAGAGGAGRPFGLTPPTILKSSS 1629

Query: 74   RRVARPP 80
              +   P
Sbjct: 1630 LSIPHEP 1636


>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
          Length = 1094

 Score = 41.2 bits (95), Expect = 0.001
 Identities = 29/109 (26%), Positives = 42/109 (38%), Gaps = 2/109 (1%)

Query: 64  SPPSTLTPDSRRVARPPPIGAEVPDVTATPARLLFFAPTRRAAPLEEMEAPAADAIMSPE 123
           S P +  P +  +A P  +   V    A+P       P     PL+E    + D    P 
Sbjct: 675 SKPRSPNPAAPALAAPAVVPGPVSTTDASPQSPP--TPQTTLTPLQESPVISKDQSPPPS 732

Query: 124 EELDGYEPEPLGKRPAVLPLLELVGESGNNTSTDGSLPSTPPPAEEEED 172
                + P P  K+P V+       E+      D + P  PPPA EE+D
Sbjct: 733 PPPSYHPPPPPTKKPEVVVEAPSASETAEEPLQDPNWPPPPPPAPEEQD 781


>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
          Length = 841

 Score = 39.3 bits (90), Expect = 0.004
 Identities = 41/160 (25%), Positives = 62/160 (38%), Gaps = 22/160 (13%)

Query: 41  EASARREIGGGEAGAVIGGSAGASPPSTLTPDSRRVARPPPIGAEVPDV---------TA 91
           E+  R E+G G   AV+  +     PS   P+      PPP+ A VPD           A
Sbjct: 2   ESGPRAELGAGAPPAVVARTPPEPRPS---PEGDPSPPPPPMSALVPDTPPDTPPAMKNA 58

Query: 92  TPARLLFFAPTRRAAPLEEMEAPAADAIMSPEEELDGYEPEPLGKRPAVLPLLELVGESG 151
           T ++ L   P   +  +    AP  +   S E +  G  P  +G R A  P       S 
Sbjct: 59  TSSKQLPLEPESPSGQVGPRPAPPQEESPSSEAKSRGPTPPAMGPRDARPP-----RRSS 113

Query: 152 NNTSTDGSLPSTPPPAEE-----EEDELYRQSLEIISRYL 186
             + T      +PP  +E     E  +L ++  E  ++YL
Sbjct: 114 QPSPTAVPASDSPPTKQEVKKAGERHKLAKERREERAKYL 153


>gi|126352608 elastin isoform e precursor [Homo sapiens]
          Length = 705

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 13/58 (22%)

Query: 18 GAGLGAGSGGATRPGGRLLATEKEASARREIGGGEAGAVIGGSAGASP----PSTLTP 71
          GAGLGA  GGA  PGG+ L         + + GG AGA +G   GA P    P  L P
Sbjct: 45 GAGLGALGGGALGPGGKPL---------KPVPGGLAGAGLGAGLGAFPAVTFPGALVP 93


>gi|126352446 elastin isoform d precursor [Homo sapiens]
          Length = 711

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 13/58 (22%)

Query: 18 GAGLGAGSGGATRPGGRLLATEKEASARREIGGGEAGAVIGGSAGASP----PSTLTP 71
          GAGLGA  GGA  PGG+ L         + + GG AGA +G   GA P    P  L P
Sbjct: 45 GAGLGALGGGALGPGGKPL---------KPVPGGLAGAGLGAGLGAFPAVTFPGALVP 93


>gi|126352322 elastin isoform c precursor [Homo sapiens]
          Length = 692

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 13/58 (22%)

Query: 18 GAGLGAGSGGATRPGGRLLATEKEASARREIGGGEAGAVIGGSAGASP----PSTLTP 71
          GAGLGA  GGA  PGG+ L         + + GG AGA +G   GA P    P  L P
Sbjct: 45 GAGLGALGGGALGPGGKPL---------KPVPGGLAGAGLGAGLGAFPAVTFPGALVP 93


>gi|126352440 elastin isoform a precursor [Homo sapiens]
          Length = 724

 Score = 38.5 bits (88), Expect = 0.006
 Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 13/58 (22%)

Query: 18 GAGLGAGSGGATRPGGRLLATEKEASARREIGGGEAGAVIGGSAGASP----PSTLTP 71
          GAGLGA  GGA  PGG+ L         + + GG AGA +G   GA P    P  L P
Sbjct: 45 GAGLGALGGGALGPGGKPL---------KPVPGGLAGAGLGAGLGAFPAVTFPGALVP 93


>gi|61097912 nucleolar protein with MIF4G domain 1 [Homo sapiens]
          Length = 860

 Score = 37.4 bits (85), Expect = 0.014
 Identities = 34/117 (29%), Positives = 47/117 (40%), Gaps = 11/117 (9%)

Query: 22  GAGSGGATRPGGRLLATE--------KEASARREIGGGEAGAVIGGSAGASPPSTLTPDS 73
           G G+  + RPGGR    E        ++A   +   G E G  +GG +GA   S    D+
Sbjct: 67  GRGAPVSFRPGGRKSRKELRKEKRHLRKARRLQRTAGPEQGPGLGGRSGAEEASGHRQDT 126

Query: 74  RRVARPPPIGAEVPDVTATPARLLFFAPTRRAAPLEEMEAPAA---DAIMSPEEELD 127
              ARP P     P     P+R+   A    A       A AA    A+++  EE D
Sbjct: 127 EERARPAPSRDPSPPRKPRPSRVKAKATAATAKTRPSAAATAAARKRALLAANEEED 183


>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 37.0 bits (84), Expect = 0.018
 Identities = 28/79 (35%), Positives = 32/79 (40%), Gaps = 11/79 (13%)

Query: 16  CGGAGLGAGSGGATRPGGRLLATEKEASARREIGGGEAGAVIG-------GSAGASPPST 68
           CGG  LGAGS    RPG   L     +S R     G      G       G A A+PP+ 
Sbjct: 158 CGGTSLGAGSRALRRPGSAALPRSPSSSRRWAAMPGPGAPRPGAPGTWPVGFAVAAPPAA 217

Query: 69  LTPDSRRVARPPPIGAEVP 87
               +  VA PPP  A  P
Sbjct: 218 ----AASVAPPPPAVAGAP 232


>gi|157785645 SPEG complex locus [Homo sapiens]
          Length = 3267

 Score = 37.0 bits (84), Expect = 0.018
 Identities = 50/180 (27%), Positives = 73/180 (40%), Gaps = 33/180 (18%)

Query: 53   AGAVIGGSAG-ASPPSTLTPDSR---RVARPPPIGAEV-------PDVTATPARLLFFAP 101
            +G   G S G A+PPS   P +    RVA PPP   E        P V A  AR+    P
Sbjct: 2255 SGHAQGPSQGPAAPPSEPKPHAAVFARVASPPPGAPEKRVPSAGGPPVLAEKARVPTVPP 2314

Query: 102  TRRAAPLEEMEAPAADAIMSPEEELDGYEPEPLGKRPAVLPLLELVGESGNNTSTDGSLP 161
               ++    +E   ++A+   + +     P  LG R     LL          S   S  
Sbjct: 2315 RPGSSLSSSIENLESEAVFEAKFKRSRESPLSLGLR-----LL----------SRSRSEE 2359

Query: 162  STPPPAEEEEDELYRQS-----LEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRV 216
              P    EEED +YR S     LE++ R   E++   +D + +G  G   R +L   +R+
Sbjct: 2360 RGPFRGAEEEDGIYRPSPAGTPLELVRR--PERSRSVQDLRAVGEPGLVRRLSLSLSQRL 2417


>gi|157743252 pecanex-like 3 [Homo sapiens]
          Length = 2034

 Score = 36.6 bits (83), Expect = 0.024
 Identities = 30/109 (27%), Positives = 47/109 (43%), Gaps = 19/109 (17%)

Query: 31   PGGRLLATEKEAS-----ARREIGGGEAGAVIGGSAGASPPS------------TLTPDS 73
            PG  LL++E  +       R+ +GG +     G   G +P S            +L+PD 
Sbjct: 1922 PGPGLLSSEGPSGKWSLGGRKGLGGSDGEPASGSPKGGTPKSQAPLDLSLSLSLSLSPDV 1981

Query: 74   RRVARPPPIGAEVP--DVTATPARLLFFAPTRRAAPLEEMEAPAADAIM 120
               A PP    ++P  D +A  +     A     AP+EE E+PAA  ++
Sbjct: 1982 STEASPPRASQDIPCLDSSAPESGTPMGALGDWPAPIEERESPAAQPLL 2030


>gi|165905613 ring finger and KH domain containing 1 [Homo sapiens]
          Length = 651

 Score = 36.6 bits (83), Expect = 0.024
 Identities = 34/136 (25%), Positives = 49/136 (36%), Gaps = 14/136 (10%)

Query: 47  EIGGGEAGAVIGGSAGASPPSTLTPDSRRVARPPPIGAEVPDVTATPARLLFFAPTRRAA 106
           E   G+  A  GG+ G + P  + PD      PP +   V      P  L    P   A+
Sbjct: 80  EGAAGDGAAAAGGADGGAAPEPVPPDGPEAGAPPTLAPAV-----APGSLPLLDP--NAS 132

Query: 107 PLEEMEAPAADAIMSPEEELDGYEPEPLGKRPAVLPLLELVGESGNNTSTDGSLPSTPPP 166
           P      P      SP +   G+ P P    P  L L + +   G+   +       P P
Sbjct: 133 P-----PPPPPPRPSPPDVFAGFAPHPAALGPPTL-LADQMSVIGSRKKSVNMTECVPVP 186

Query: 167 AEEEEDELY-RQSLEI 181
           + E   E+  RQ  +I
Sbjct: 187 SSEHVAEIVGRQGCKI 202



 Score = 29.3 bits (64), Expect = 3.8
 Identities = 32/124 (25%), Positives = 39/124 (31%), Gaps = 6/124 (4%)

Query: 49  GGGEAGAVIGGSAGASPPSTLTPDSRRVARPPPIGAEVPDVTATPARLL---FFAPTRRA 105
           GGG  G V        P     P+  + A P P     PD  A   RL      A     
Sbjct: 14  GGGGGGGVGAAGEDPGPGPAPPPEGAQEAAPAPRPPPEPDDAAAALRLALDQLSALGLGG 73

Query: 106 APLEEMEAPAADAIMSPEEELDGYEPEPL---GKRPAVLPLLELVGESGNNTSTDGSLPS 162
           A   + E  A D   +      G  PEP+   G      P L      G+    D +   
Sbjct: 74  AGDTDEEGAAGDGAAAAGGADGGAAPEPVPPDGPEAGAPPTLAPAVAPGSLPLLDPNASP 133

Query: 163 TPPP 166
            PPP
Sbjct: 134 PPPP 137


>gi|110347449 POU domain, class 4, transcription factor 1 [Homo
           sapiens]
          Length = 419

 Score = 36.2 bits (82), Expect = 0.031
 Identities = 33/108 (30%), Positives = 41/108 (37%), Gaps = 18/108 (16%)

Query: 17  GGAGLGAGSGGATRPGGRLLATEKEASARREIGGGEAGAVIGGSAGASPP----STLTPD 72
           GG G G G GG   PGG               GGG  G ++GGSA   P       L+  
Sbjct: 157 GGPGGGPGGGGGGGPGGG--------------GGGPGGGLLGGSAHPHPHMHSLGHLSHP 202

Query: 73  SRRVARPPPIGAEVPDVTATPARLLFFAPTRRAAPLEEMEAPAADAIM 120
           +   A   P G   P + A  A     A    AA  +   A AA A++
Sbjct: 203 AAAAAMNMPSGLPHPGLVAAAAHHGAAAAAAAAAAGQVAAASAAAAVV 250


>gi|224586851 sorbin and SH3 domain containing 2 isoform 6 [Homo
           sapiens]
          Length = 824

 Score = 35.8 bits (81), Expect = 0.041
 Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 7/99 (7%)

Query: 31  PGGRLLATEKEASARREIGGGEAG--AVIGGSAGASPPSTLTPDSRRVARPPPIGAEVPD 88
           P  R + T K  S  R I   E G  +++        P+T TP  R   R P   + + +
Sbjct: 374 PPDRKVDTRKFRSEPRSIFEYEPGKSSILQHERPPPLPTTPTPVPREPGRKPLSSSRLGE 433

Query: 89  VTATPARLLFFAPTRRAAPLEEMEAPAADAIMSPEEELD 127
           VT +P+      P R  AP     APA      P++ LD
Sbjct: 434 VTGSPS-----PPPRSGAPTPSSRAPALSPTRPPKKPLD 467


>gi|224586846 sorbin and SH3 domain containing 2 isoform 4 [Homo
           sapiens]
          Length = 731

 Score = 35.8 bits (81), Expect = 0.041
 Identities = 29/99 (29%), Positives = 41/99 (41%), Gaps = 7/99 (7%)

Query: 31  PGGRLLATEKEASARREIGGGEAG--AVIGGSAGASPPSTLTPDSRRVARPPPIGAEVPD 88
           P  R + T K  S  R I   E G  +++        P+T TP  R   R P   + + +
Sbjct: 281 PPDRKVDTRKFRSEPRSIFEYEPGKSSILQHERPPPLPTTPTPVPREPGRKPLSSSRLGE 340

Query: 89  VTATPARLLFFAPTRRAAPLEEMEAPAADAIMSPEEELD 127
           VT +P+      P R  AP     APA      P++ LD
Sbjct: 341 VTGSPS-----PPPRSGAPTPSSRAPALSPTRPPKKPLD 374


>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
          Length = 1312

 Score = 35.8 bits (81), Expect = 0.041
 Identities = 34/124 (27%), Positives = 48/124 (38%), Gaps = 28/124 (22%)

Query: 50  GGEAGAVIGGSAGASPPSTLTPDSRRVARPPPIGAEVPDVTATPARLLFFAPTRRAAPLE 109
           GG A      SA +SP  +  P S   + PPP     P     P R   + P     P +
Sbjct: 182 GGPAPPPAPSSASSSPSPS--PSSSSPSPPPPPPPPAPPAPPAP-RFDIYDPFH---PTD 235

Query: 110 EMEAPAADAIMSPEEELDGYEPEPLGKRPAVLPLLELVGESGNNTSTDGSLPSTPPPAEE 169
           E  +P      +PE++ D +EP                  +G+N S+    PS     EE
Sbjct: 236 EAYSPPP----APEQKYDPFEP------------------TGSNPSSSAGTPSPEEEEEE 273

Query: 170 EEDE 173
           EE+E
Sbjct: 274 EEEE 277



 Score = 33.9 bits (76), Expect = 0.15
 Identities = 43/169 (25%), Positives = 61/169 (36%), Gaps = 35/169 (20%)

Query: 22   GAGSGGATRPGGRLLATEKEASARREIGGGEAGAVIGGSA--------------GASPPS 67
            G GSGG+   GG++   + +A +  +  G +       S                A PP 
Sbjct: 930  GGGSGGS---GGQVSLKKSKADSCSQAAGTKGAEETSWSGEERAAKVPSTPPPKAAPPPP 986

Query: 68   TLTPDSRRVARPPPIGAEVPDVTATPARLLFFAPTRRAAPLEEMEAPAADAIMSPEEELD 127
             LTPDS+ V        + P+V+  P      A  R  A  EE E    +     EEE +
Sbjct: 987  ALTPDSQTV----DSSCKTPEVSFLPEEATEEAGVRGGAEEEEEEEEEEE----EEEEEE 1038

Query: 128  GYEP------EPLGKRPAVLPLL-ELVGESG---NNTSTDGSLPSTPPP 166
              +P            P+  P      G+SG      S    LP+ PPP
Sbjct: 1039 EQQPATTTATSTAAAAPSTAPSAGSTAGDSGAEDGPASRVSQLPTLPPP 1087


>gi|72256200 B-cell CLL/lymphoma 9 [Homo sapiens]
          Length = 1426

 Score = 35.8 bits (81), Expect = 0.041
 Identities = 36/135 (26%), Positives = 51/135 (37%), Gaps = 20/135 (14%)

Query: 65  PPSTLTPDSR-----RVARPPPIGAEVPDVTATPARLLFFAPTRRAAPLEEMEAPAADAI 119
           PP+    D       R+   PPI A  P   A P  L   +P      +  + +PA+   
Sbjct: 238 PPAPANQDQNSSQNTRLQPTPPIPAPAPKPAAPPRPLDRESPGVENKLIPSVGSPASSTP 297

Query: 120 MSPEEELDGYEPEPLGKRPAVLPLLELVGESGNNTSTDGSLPSTPPPAE-------EEED 172
           + P    DG  P       AV P    V +  N++S D   P  PP +        E  D
Sbjct: 298 LPP----DGTGPNSTPNNRAVTP----VSQGSNSSSADPKAPPPPPVSSGEPPTLGENPD 349

Query: 173 ELYRQSLEIISRYLR 187
            L ++ LE   R L+
Sbjct: 350 GLSQEQLEHRERSLQ 364


>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
           sapiens]
          Length = 2462

 Score = 35.4 bits (80), Expect = 0.053
 Identities = 43/160 (26%), Positives = 61/160 (38%), Gaps = 25/160 (15%)

Query: 59  GSAGASPPSTLTPDSRRVARPPPIGAEVPDVT-ATPARLLFFAPTRRAAPLEEMEAPAAD 117
           G  G  PP+TL  D      P P   ++P  T  TPA     APT   AP     +P+A 
Sbjct: 746 GQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPAP----PSPSAP 801

Query: 118 AIMSPEEELDGYEPEPLGKRPAVLPLLELVGESGNNTSTDGSLPSTPPPAEEEEDELYRQ 177
             + P+EE +        +  A  P +E  GE              PP AEE   +  + 
Sbjct: 802 PPVVPKEEKE--------EETAAAPPVE-EGEE-----------QKPPAAEELAVDTGKA 841

Query: 178 SLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVG 217
              + S    E   G    K    + AT+  AL+  ++ G
Sbjct: 842 EEPVKSECTEEAEEGPAKGKDAEAAEATAEGALKAEKKEG 881


>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
           sapiens]
          Length = 2524

 Score = 35.4 bits (80), Expect = 0.053
 Identities = 43/160 (26%), Positives = 61/160 (38%), Gaps = 25/160 (15%)

Query: 59  GSAGASPPSTLTPDSRRVARPPPIGAEVPDVT-ATPARLLFFAPTRRAAPLEEMEAPAAD 117
           G  G  PP+TL  D      P P   ++P  T  TPA     APT   AP     +P+A 
Sbjct: 763 GQNGPKPPATLGADGPPPGPPTPPPEDIPAPTEPTPASEATGAPTPPPAP----PSPSAP 818

Query: 118 AIMSPEEELDGYEPEPLGKRPAVLPLLELVGESGNNTSTDGSLPSTPPPAEEEEDELYRQ 177
             + P+EE +        +  A  P +E  GE              PP AEE   +  + 
Sbjct: 819 PPVVPKEEKE--------EETAAAPPVE-EGEE-----------QKPPAAEELAVDTGKA 858

Query: 178 SLEIISRYLREQATGAKDTKPMGRSGATSRKALETLRRVG 217
              + S    E   G    K    + AT+  AL+  ++ G
Sbjct: 859 EEPVKSECTEEAEEGPAKGKDAEAAEATAEGALKAEKKEG 898


>gi|210147522 zinc finger, SWIM-type containing 6 [Homo sapiens]
          Length = 1215

 Score = 35.4 bits (80), Expect = 0.053
 Identities = 25/65 (38%), Positives = 29/65 (44%), Gaps = 4/65 (6%)

Query: 17 GGAGLGAGSGGATRPGGRLLATEKEASARREIGGGEAGAVIGGSAGASPPSTLTPDSRRV 76
          GG G G G   A RPG R       A+A    GGG A  ++      SP S L   +RRV
Sbjct: 30 GGGGAGGGYSSACRPGPR----AGGAAAAAACGGGAALGLLPPGKTQSPESLLDIAARRV 85

Query: 77 ARPPP 81
          A   P
Sbjct: 86 AEKWP 90



 Score = 30.0 bits (66), Expect = 2.2
 Identities = 18/51 (35%), Positives = 22/51 (43%), Gaps = 5/51 (9%)

Query: 17  GGAGLGAGSGGATRPGGRLLATEKEASARREIGGGEAGAVIGGSAGASPPS 67
           GGAG G G G ++ P     A    A+A        A A    +AGA  PS
Sbjct: 145 GGAGGGGGGGSSSSPAATSAAATSAAAA-----AAAAAAAAAAAAGAGAPS 190


>gi|188497630 hypothetical protein LOC55571 [Homo sapiens]
          Length = 510

 Score = 35.4 bits (80), Expect = 0.053
 Identities = 21/44 (47%), Positives = 25/44 (56%), Gaps = 3/44 (6%)

Query: 17 GGAGLGAGSGGATRPGGRLLATEKEASARREIGGGEAGAVIGGS 60
          G +G G+GSGG   P GR+  T KE S+   I   EAG   GGS
Sbjct: 43 GASGPGSGSGGPGGPAGRMSLTPKELSSLLSIISEEAG---GGS 83



 Score = 28.1 bits (61), Expect = 8.5
 Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 3/46 (6%)

Query: 26 GGATRPGGRLLATEKEASARREIGGGEA---GAVIGGSAGASPPST 68
          GGA+   GRLL   ++  +R   G       G   GG  GAS P +
Sbjct: 4  GGASAASGRLLTAAEQRGSREAAGSASRSGFGGSGGGRGGASGPGS 49


>gi|91718902 myeloid/lymphoid or mixed-lineage leukemia 3 [Homo
            sapiens]
          Length = 4911

 Score = 35.0 bits (79), Expect = 0.069
 Identities = 42/163 (25%), Positives = 62/163 (38%), Gaps = 36/163 (22%)

Query: 59   GSAGASPPSTLTPDSRRVA--RPPPIGAEVPDVTATPARLLFFAPTRRAAPLEEMEAPAA 116
            GS+ + PPS + P ++ V   RPPP+G          +R    AP     PL  +  P  
Sbjct: 1885 GSSNSRPPSPMDPYAKMVGTPRPPPVGHSF-------SRRNSAAPVENCTPLSSVSRPL- 1936

Query: 117  DAIMSPEEELDGYEPEPLGKRPAVLPLLELVGESGNNTSTDGSLPSTPPPAEEEEDELYR 176
                           E    RP+  P+ +L   S  N       P TP P   ++   + 
Sbjct: 1937 ------------QMNETTANRPS--PVRDLCSSSTTNNDPYAKPPDTPRPVMTDQ---FP 1979

Query: 177  QSLEII-SRYLREQ------ATGAKD--TKPMGRSGATSRKAL 210
            +SL +  S  + EQ      A G  D  TKP  R+    R+ +
Sbjct: 1980 KSLGLSRSPVVSEQTAKGPIAAGTSDHFTKPSPRADVFQRQRI 2022


>gi|5174467 heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3B1
           [Homo sapiens]
          Length = 390

 Score = 35.0 bits (79), Expect = 0.069
 Identities = 27/67 (40%), Positives = 30/67 (44%), Gaps = 4/67 (5%)

Query: 59  GSAGASPPSTLTPDSRRVARPPPIGAEVPDVTATPARLLFFAP--TRRAAPLEEMEAPAA 116
           GS  A+P   L     R A  PP  A  PD   TP RL F AP  T  A+  E  E  A+
Sbjct: 53  GSCAAAPGLLLLGSGSRAAHDPPALATAPD--GTPPRLPFRAPPATPLASGKEMAEGAAS 110

Query: 117 DAIMSPE 123
               SPE
Sbjct: 111 PEEQSPE 117


>gi|192807323 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform A [Homo sapiens]
          Length = 1679

 Score = 34.7 bits (78), Expect = 0.091
 Identities = 33/118 (27%), Positives = 44/118 (37%), Gaps = 9/118 (7%)

Query: 18  GAGLGAGSGGATRPGGRLLATEKEASARREIGGGEAGAVIGGSAGASPPSTLTPDSRRVA 77
           G G G G G    PG          +  R  G G       G +G  P     P      
Sbjct: 229 GPGPGPGPGPGPGPG------PAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGP-P 281

Query: 78  RPPPIG--AEVPDVTATPARLLFFAPTRRAAPLEEMEAPAADAIMSPEEELDGYEPEP 133
           +P P G  A     T+TP +L+   PT R +P      PAA  +M P+ +  G   +P
Sbjct: 282 KPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQP 339


>gi|192807320 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform F [Homo sapiens]
          Length = 1613

 Score = 34.7 bits (78), Expect = 0.091
 Identities = 33/118 (27%), Positives = 44/118 (37%), Gaps = 9/118 (7%)

Query: 18  GAGLGAGSGGATRPGGRLLATEKEASARREIGGGEAGAVIGGSAGASPPSTLTPDSRRVA 77
           G G G G G    PG          +  R  G G       G +G  P     P      
Sbjct: 229 GPGPGPGPGPGPGPG------PAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGP-P 281

Query: 78  RPPPIG--AEVPDVTATPARLLFFAPTRRAAPLEEMEAPAADAIMSPEEELDGYEPEP 133
           +P P G  A     T+TP +L+   PT R +P      PAA  +M P+ +  G   +P
Sbjct: 282 KPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQP 339


>gi|192807318 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform E [Homo sapiens]
          Length = 1614

 Score = 34.7 bits (78), Expect = 0.091
 Identities = 33/118 (27%), Positives = 44/118 (37%), Gaps = 9/118 (7%)

Query: 18  GAGLGAGSGGATRPGGRLLATEKEASARREIGGGEAGAVIGGSAGASPPSTLTPDSRRVA 77
           G G G G G    PG          +  R  G G       G +G  P     P      
Sbjct: 229 GPGPGPGPGPGPGPG------PAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGP-P 281

Query: 78  RPPPIG--AEVPDVTATPARLLFFAPTRRAAPLEEMEAPAADAIMSPEEELDGYEPEP 133
           +P P G  A     T+TP +L+   PT R +P      PAA  +M P+ +  G   +P
Sbjct: 282 KPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQP 339


>gi|192807316 SWI/SNF-related matrix-associated actin-dependent
           regulator of chromatin a4 isoform D [Homo sapiens]
          Length = 1616

 Score = 34.7 bits (78), Expect = 0.091
 Identities = 33/118 (27%), Positives = 44/118 (37%), Gaps = 9/118 (7%)

Query: 18  GAGLGAGSGGATRPGGRLLATEKEASARREIGGGEAGAVIGGSAGASPPSTLTPDSRRVA 77
           G G G G G    PG          +  R  G G       G +G  P     P      
Sbjct: 229 GPGPGPGPGPGPGPG------PAPPNYSRPHGMGGPNMPPPGPSGVPPGMPGQPPGGP-P 281

Query: 78  RPPPIG--AEVPDVTATPARLLFFAPTRRAAPLEEMEAPAADAIMSPEEELDGYEPEP 133
           +P P G  A     T+TP +L+   PT R +P      PAA  +M P+ +  G   +P
Sbjct: 282 KPWPEGPMANAAAPTSTPQKLIPPQPTGRPSPAPPAVPPAASPVMPPQTQSPGQPAQP 339


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.135    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,162,159
Number of Sequences: 37866
Number of extensions: 756541
Number of successful extensions: 4508
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 52
Number of HSP's successfully gapped in prelim test: 305
Number of HSP's that attempted gapping in prelim test: 3945
Number of HSP's gapped (non-prelim): 818
length of query: 271
length of database: 18,247,518
effective HSP length: 101
effective length of query: 170
effective length of database: 14,423,052
effective search space: 2451918840
effective search space used: 2451918840
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.