Guide to the Human Genome
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Name: MCL1 Sequence: fasta or formatted (271aa) NCBI GI: 33519458
Description:

myeloid cell leukemia sequence 1 isoform 2

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Other entries for this name:
alt prot [350aa] myeloid cell leukemia sequence 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine            11.8         32           2
 C cysteine            2.6          7           2
 D aspartate           3.0          8           1
 E glutamate           9.2         25           4
 F phenylalanine       2.2          6           2
 G glycine            12.5         34           3
 H histidine           0.7          2           1
 I isoleucine          3.3          9           2
 K lysine              2.6          7           1
 L leucine             9.2         25           2
 M methionine          1.5          4           1
 N asparagine          2.2          6           2
 P proline             8.9         24           3
 Q glutamine           1.8          5           1
 R arginine            9.2         25           2
 S serine              6.6         18           1
 T threonine           5.5         15           1
 V valine              4.1         11           1
 W tryptophan          1.5          4           1
 Y tyrosine            1.5          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   myeloid cell leukemia sequence 1 isoform 2 
MCL1                  0.815   myeloid cell leukemia sequence 1 isoform 1 
SLC16A2               0.034   solute carrier family 16, member 2 
SHANK3                0.032   SH3 and multiple ankyrin repeat domains 3 
KIAA1522              0.030   hypothetical protein LOC57648 
MAP7D1                0.026   MAP7 domain containing 1 
ELN                   0.026   elastin isoform e precursor 
ELN                   0.026   elastin isoform d precursor 
ELN                   0.026   elastin isoform c precursor 
ELN                   0.026   elastin isoform a precursor 
NOM1                  0.023   nucleolar protein with MIF4G domain 1 
LOC100293375          0.023   PREDICTED: hypothetical protein 
SPEG                  0.023   SPEG complex locus 
PCNXL3                0.023   pecanex-like 3 
MEX3D                 0.023   ring finger and KH domain containing 1 
POU4F1                0.021   POU domain, class 4, transcription factor 1 
SORBS2                0.021   sorbin and SH3 domain containing 2 isoform 6 
SORBS2                0.021   sorbin and SH3 domain containing 2 isoform 4 
SCAF1                 0.021   SR-related CTD-associated factor 1 
BCL9                  0.021   B-cell CLL/lymphoma 9 
NCOR2                 0.019   nuclear receptor co-repressor 2 isoform 2 
NCOR2                 0.019   nuclear receptor co-repressor 2 isoform 1 
ZSWIM6                0.019   zinc finger, SWIM-type containing 6 
C2orf29               0.019   hypothetical protein LOC55571 
MLL3                  0.019   myeloid/lymphoid or mixed-lineage leukemia 3 
HS3ST3B1              0.019   heparan sulfate D-glucosaminyl 3-O-sulfotransferase 3...
SMARCA4               0.019   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.019   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.019   SWI/SNF-related matrix-associated actin-dependent r...
SMARCA4               0.019   SWI/SNF-related matrix-associated actin-dependent r...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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