Guide to the Human Genome
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Name: TXNRD2 Sequence: fasta or formatted (524aa) NCBI GI: 22035672
Description:

thioredoxin reductase 2 precursor

Referenced in:

Glutathione Pathways
Selenium Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.0         47           3
 C cysteine            2.3         12           1
 D aspartate           5.0         26           2
 E glutamate           5.3         28           3
 F phenylalanine       2.5         13           1
 G glycine            11.8         62           3
 H histidine           3.1         16           1
 I isoleucine          4.4         23           3
 K lysine              4.0         21           2
 L leucine             8.6         45           2
 M methionine          2.5         13           2
 N asparagine          1.5          8           1
 P proline             4.8         25           2
 Q glutamine           4.0         21           2
 R arginine            6.3         33           2
 S serine              5.0         26           2
 T threonine           6.1         32           2
 U selenocysteine      0.2          1           1
 V valine              9.5         50           2
 W tryptophan          1.5          8           1
 Y tyrosine            2.7         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thioredoxin reductase 2 precursor 
TXNRD1                0.512   thioredoxin reductase 1 isoform 2 
TXNRD1                0.512   thioredoxin reductase 1 isoform 3 
TXNRD1                0.512   thioredoxin reductase 1 isoform 1 
TXNRD1                0.512   thioredoxin reductase 1 isoform 2 
TXNRD1                0.512   thioredoxin reductase 1 isoform 2 
GSR                   0.268   glutathione reductase 
DLD                   0.148   dihydrolipoamide dehydrogenase precursor 
AIFM3                 0.012   apoptosis-inducing factor, mitochondrion-associated...
AIFM3                 0.012   apoptosis-inducing factor, mitochondrion-associated,...
AIFM3                 0.012   apoptosis-inducing factor, mitochondrion-associated,...
PNPLA3                0.011   patatin-like phospholipase domain containing 3 [Homo...
GPD2                  0.010   glycerol-3-phosphate dehydrogenase 2, mitochondrial...
GPD2                  0.010   glycerol-3-phosphate dehydrogenase 2, mitochondrial...
SQRDL                 0.008   sulfide dehydrogenase like 
KPNA2                 0.007   karyopherin alpha 2 
ACO2                  0.007   aconitase 2, mitochondrial precursor 
RETSAT                0.006   all-trans-13,14-dihydroretinol saturase 
MICAL2                0.006   microtubule associated monoxygenase, calponin and LIM...
PYROXD2               0.005   pyridine nucleotide-disulphide oxidoreductase domai...
AOF1                  0.005   amine oxidase (flavin containing) domain 1 
SQLE                  0.005   squalene epoxidase 
MAOA                  0.004   monoamine oxidase A 
CHSY1                 0.004   chondroitin sulfate synthase 1 
SMS                   0.004   spermine synthase 
KIF7                  0.004   kinesin family member 7 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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