Guide to the Human Genome
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Name: PYROXD1 Sequence: fasta or formatted (500aa) NCBI GI: 51036596
Description:

pyridine nucleotide-disulphide oxidoreductase domain 1

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.4         37           3
 C cysteine            2.2         11           1
 D aspartate           5.8         29           2
 E glutamate           8.2         41           2
 F phenylalanine       4.6         23           2
 G glycine             7.8         39           3
 H histidine           2.6         13           1
 I isoleucine          6.6         33           2
 K lysine              8.4         42           3
 L leucine             8.2         41           2
 M methionine          3.0         15           2
 N asparagine          3.6         18           1
 P proline             3.2         16           3
 Q glutamine           3.4         17           2
 R arginine            3.0         15           1
 S serine              5.6         28           2
 T threonine           6.0         30           2
 V valine              6.2         31           3
 W tryptophan          1.4          7           1
 Y tyrosine            2.8         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   pyridine nucleotide-disulphide oxidoreductase domain... 
AIFM3                 0.022   apoptosis-inducing factor, mitochondrion-associated...
AIFM3                 0.022   apoptosis-inducing factor, mitochondrion-associated,...
AIFM3                 0.022   apoptosis-inducing factor, mitochondrion-associated,...
AIFM2                 0.014   apoptosis-inducing factor (AIF)-like mitchondrion-as...
AIFM1                 0.013   programmed cell death 8 isoform 2 
AIFM1                 0.013   programmed cell death 8 isoform 1 
AIFM1                 0.012   programmed cell death 8 isoform 5 
DLD                   0.011   dihydrolipoamide dehydrogenase precursor 
SMC1B                 0.011   SMC1 structural maintenance of chromosomes 1-like 2 ...
SQRDL                 0.010   sulfide dehydrogenase like 
PECAM1                0.008   platelet/endothelial cell adhesion molecule 
MAP9                  0.008   aster-associated protein 
KRCC1                 0.007   lysine-rich coiled-coil 1 
GSR                   0.006   glutathione reductase 
ZNF415                0.006   zinc finger protein 415 isoform 1 
ZNF415                0.006   zinc finger protein 415 isoform 2 
PAOX                  0.006   polyamine oxidase isoform 4 
PAOX                  0.006   polyamine oxidase isoform 2 
PAOX                  0.006   polyamine oxidase isoform 1 
TXNRD1                0.005   thioredoxin reductase 1 isoform 2 
TXNRD1                0.005   thioredoxin reductase 1 isoform 3 
TXNRD1                0.005   thioredoxin reductase 1 isoform 1 
TXNRD1                0.005   thioredoxin reductase 1 isoform 2 
TXNRD1                0.005   thioredoxin reductase 1 isoform 2 
CAD                   0.005   carbamoylphosphate synthetase 2/aspartate transcarba...
KDM1                  0.005   amine oxidase (flavin containing) domain 2 isoform b...
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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