Guide to the Human Genome
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Name: AIFM3 Sequence: fasta or formatted (605aa) NCBI GI: 21389617
Description:

apoptosis-inducing factor, mitochondrion-associated, 3 isoform 1

Referenced in:

BCL2 Pathways, Caspases, and Programmed Cell Death
Mitochondria

Other entries for this name:
alt prot [604aa] apoptosis-inducing factor, mitochondrion-associated, 3 isoform 3
alt prot [598aa] apoptosis-inducing factor, mitochondrion-associated, 3 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.9         48           2
 C cysteine            1.8         11           1
 D aspartate           3.6         22           2
 E glutamate           7.6         46           2
 F phenylalanine       4.3         26           2
 G glycine             8.9         54           2
 H histidine           2.3         14           1
 I isoleucine          2.8         17           2
 K lysine              7.4         45           2
 L leucine             8.8         53           3
 M methionine          2.5         15           2
 N asparagine          2.8         17           2
 P proline             4.6         28           1
 Q glutamine           3.3         20           1
 R arginine            6.4         39           2
 S serine              6.1         37           3
 T threonine           4.3         26           1
 V valine             10.9         66           4
 W tryptophan          1.0          6           1
 Y tyrosine            2.5         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   apoptosis-inducing factor, mitochondrion-associated,... 
AIFM3                 0.983   apoptosis-inducing factor, mitochondrion-associated,...
AIFM3                 0.977   apoptosis-inducing factor, mitochondrion-associated...
AIFM1                 0.074   programmed cell death 8 isoform 2 
AIFM1                 0.073   programmed cell death 8 isoform 1 
AIFM1                 0.045   programmed cell death 8 isoform 5 
DLD                   0.033   dihydrolipoamide dehydrogenase precursor 
GSR                   0.024   glutathione reductase 
AIFM2                 0.020   apoptosis-inducing factor (AIF)-like mitchondrion-as...
PYROXD1               0.019   pyridine nucleotide-disulphide oxidoreductase domain...
RFESD                 0.012   Rieske (Fe-S) domain containing isoform 1 
RFESD                 0.012   Rieske (Fe-S) domain containing isoform 1 
RFESD                 0.012   Rieske (Fe-S) domain containing isoform 2 
TXNRD1                0.012   thioredoxin reductase 1 isoform 2 
TXNRD1                0.012   thioredoxin reductase 1 isoform 3 
TXNRD1                0.012   thioredoxin reductase 1 isoform 1 
TXNRD1                0.012   thioredoxin reductase 1 isoform 2 
TXNRD1                0.012   thioredoxin reductase 1 isoform 2 
TXNRD2                0.010   thioredoxin reductase 2 precursor 
HOXA2                 0.008   homeobox A2 
SMOX                  0.007   spermine oxidase isoform 4 
SMOX                  0.007   spermine oxidase isoform 3 
SMOX                  0.007   spermine oxidase isoform 2 
SMOX                  0.007   spermine oxidase isoform 1 
IGSF2                 0.007   immunoglobulin superfamily, member 2 
SQLE                  0.006   squalene epoxidase 
LDHAL6B               0.006   lactate dehydrogenase A-like 6B 
LDHAL6A               0.006   lactate dehydrogenase A-like 6A 
LDHAL6A               0.006   lactate dehydrogenase A-like 6A 
IL4I1                 0.006   interleukin 4 induced 1 isoform 1 precursor 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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