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Search of human proteins with 33469964
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33469964 splicing factor 4 [Homo sapiens]
(645 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33469964 splicing factor 4 [Homo sapiens] 1305 0.0
gi|224282119 splicing factor, arginine/serine-rich 14 [Homo sapi... 80 6e-15
gi|224282117 splicing factor, arginine/serine-rich 14 [Homo sapi... 80 6e-15
gi|119226260 calcium homeostasis endoplasmic reticulum protein [... 65 3e-10
gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo... 62 1e-09
gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Hom... 60 6e-09
gi|5032031 RNA binding motif protein 5 [Homo sapiens] 49 1e-05
gi|20127479 RNA binding motif protein 10 isoform 1 [Homo sapiens] 49 1e-05
gi|23111018 RNA binding motif protein 10 isoform 2 [Homo sapiens] 49 1e-05
gi|63003897 transcription factor NRF [Homo sapiens] 48 2e-05
gi|39725952 angiogenic factor VG5Q [Homo sapiens] 48 3e-05
gi|56788356 tuftelin interacting protein 11 [Homo sapiens] 47 7e-05
gi|8393259 tuftelin interacting protein 11 [Homo sapiens] 47 7e-05
gi|167900474 coiled-coil domain containing 75 [Homo sapiens] 45 2e-04
gi|122937227 U2-associated SR140 protein [Homo sapiens] 44 6e-04
gi|8922313 G patch domain containing 2 [Homo sapiens] 43 8e-04
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 41 0.003
gi|21396500 HIRA interacting protein 3 [Homo sapiens] 41 0.003
gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens] 41 0.004
gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens] 41 0.004
gi|33946327 nucleoporin 214kDa [Homo sapiens] 40 0.005
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ... 40 0.007
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ... 40 0.007
gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-li... 40 0.007
gi|47825361 non-specific cytotoxic cell receptor protein 1 homol... 40 0.007
gi|55750053 atrophin-1 [Homo sapiens] 40 0.009
gi|55750041 atrophin-1 [Homo sapiens] 40 0.009
gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens] 40 0.009
gi|163965366 nascent polypeptide-associated complex alpha subuni... 40 0.009
gi|38158015 mastermind-like 3 [Homo sapiens] 39 0.015
>gi|33469964 splicing factor 4 [Homo sapiens]
Length = 645
Score = 1305 bits (3376), Expect = 0.0
Identities = 645/645 (100%), Positives = 645/645 (100%)
Query: 1 MSLKMDNRDVAGKANRWFGVAPPKSGKMNMNILHQEELIAQKKREIEAKMEQKAKQNQVA 60
MSLKMDNRDVAGKANRWFGVAPPKSGKMNMNILHQEELIAQKKREIEAKMEQKAKQNQVA
Sbjct: 1 MSLKMDNRDVAGKANRWFGVAPPKSGKMNMNILHQEELIAQKKREIEAKMEQKAKQNQVA 60
Query: 61 SPQPPHPGEITNAHNSSCISNKFANDGSFLQQFLKLQKAQTSTDAPTSAPSAPPSTPTPS 120
SPQPPHPGEITNAHNSSCISNKFANDGSFLQQFLKLQKAQTSTDAPTSAPSAPPSTPTPS
Sbjct: 61 SPQPPHPGEITNAHNSSCISNKFANDGSFLQQFLKLQKAQTSTDAPTSAPSAPPSTPTPS 120
Query: 121 AGKRSLLISRRTGLGLASLPGPVKSYSHAKQLPVAHRPSVFQSPDEDEEEDYEQWLEIKV 180
AGKRSLLISRRTGLGLASLPGPVKSYSHAKQLPVAHRPSVFQSPDEDEEEDYEQWLEIKV
Sbjct: 121 AGKRSLLISRRTGLGLASLPGPVKSYSHAKQLPVAHRPSVFQSPDEDEEEDYEQWLEIKV 180
Query: 181 SPPEGAETRKVIEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAE 240
SPPEGAETRKVIEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAE
Sbjct: 181 SPPEGAETRKVIEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAE 240
Query: 241 IRKEAQKSQAASQKVSPPEDEEVKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYE 300
IRKEAQKSQAASQKVSPPEDEEVKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYE
Sbjct: 241 IRKEAQKSQAASQKVSPPEDEEVKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYE 300
Query: 301 PNSQGYKYYRQKLEEFRKAKASSTGSFTAPDPGLKRKSPPEALSGSLPPATTCPASSTPA 360
PNSQGYKYYRQKLEEFRKAKASSTGSFTAPDPGLKRKSPPEALSGSLPPATTCPASSTPA
Sbjct: 301 PNSQGYKYYRQKLEEFRKAKASSTGSFTAPDPGLKRKSPPEALSGSLPPATTCPASSTPA 360
Query: 361 PTIIPAPAAPGKPASAATVKRKRKSRWGPEEDKVELPPAELVQRDVDASPSPLSVQDLKG 420
PTIIPAPAAPGKPASAATVKRKRKSRWGPEEDKVELPPAELVQRDVDASPSPLSVQDLKG
Sbjct: 361 PTIIPAPAAPGKPASAATVKRKRKSRWGPEEDKVELPPAELVQRDVDASPSPLSVQDLKG 420
Query: 421 LGYEKGKPVGLVGVTELSDAQKKQLKEQQEMQQMYDMIMQHKRAMQDMQLLWEKAVQQHQ 480
LGYEKGKPVGLVGVTELSDAQKKQLKEQQEMQQMYDMIMQHKRAMQDMQLLWEKAVQQHQ
Sbjct: 421 LGYEKGKPVGLVGVTELSDAQKKQLKEQQEMQQMYDMIMQHKRAMQDMQLLWEKAVQQHQ 480
Query: 481 HGYDSDEEVDSELGTWEHQLRRMEMDKTREWAEQLTKMGRGKHFIGDFLPPDELEKFMET 540
HGYDSDEEVDSELGTWEHQLRRMEMDKTREWAEQLTKMGRGKHFIGDFLPPDELEKFMET
Sbjct: 481 HGYDSDEEVDSELGTWEHQLRRMEMDKTREWAEQLTKMGRGKHFIGDFLPPDELEKFMET 540
Query: 541 FKALKEGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVD 600
FKALKEGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVD
Sbjct: 541 FKALKEGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVD 600
Query: 601 GAGFGIDRPAELSKEDDEYEAFRKRMMLAYRFRPNPLNNPRRPYY 645
GAGFGIDRPAELSKEDDEYEAFRKRMMLAYRFRPNPLNNPRRPYY
Sbjct: 601 GAGFGIDRPAELSKEDDEYEAFRKRMMLAYRFRPNPLNNPRRPYY 645
>gi|224282119 splicing factor, arginine/serine-rich 14 [Homo sapiens]
Length = 1082
Score = 80.1 bits (196), Expect = 6e-15
Identities = 39/92 (42%), Positives = 61/92 (66%), Gaps = 4/92 (4%)
Query: 542 KALKEGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVDG 601
+ + + ++P ++ + KLT +N+G+QML KMGWKEG GLGS G+GI+ PV+ GT + +G
Sbjct: 991 RPMSKKKKPKDLDFAQQKLTDKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPS-EG 1049
Query: 602 AGFGIDRPAELSKEDDEYEAFRKRMMLAYRFR 633
G G D ++D ++ FR+RMM YR +
Sbjct: 1050 EGLGADGQ---EHKEDTFDVFRQRMMQMYRHK 1078
Score = 64.7 bits (156), Expect = 3e-10
Identities = 30/55 (54%), Positives = 41/55 (74%)
Query: 187 ETRKVIEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAEI 241
+T + EKLARFVA+ GPE+E+ ++E+ DNP FLHD+NS F +YRKKV E+
Sbjct: 783 KTMETAEKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSSAFKFYRKKVFEL 837
Score = 57.4 bits (137), Expect = 4e-08
Identities = 27/71 (38%), Positives = 44/71 (61%)
Query: 245 AQKSQAASQKVSPPEDEEVKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYEPNSQ 304
++ Q +S S D + AEKLARF+A GPE+E +++N+ +N FL++ NS
Sbjct: 766 SEAPQTSSPCPSADIDMKTMETAEKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSS 825
Query: 305 GYKYYRQKLEE 315
+K+YR+K+ E
Sbjct: 826 AFKFYRKKVFE 836
Score = 49.3 bits (116), Expect = 1e-05
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 21/232 (9%)
Query: 183 PEGAETRKV--IEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAE 240
P+ A+ R V I++L + V EG ++ + K++PA+ FL D+NS E+ YY+ K+AE
Sbjct: 579 PQRADHRVVGTIDQLVKRVIEGSLSPKERTL--LKEDPAYWFLSDENSLEYKYYKLKLAE 636
Query: 241 IRKEAQKSQAASQKVSPPE--------DEEVKNLAEKLARFIADGGPEVETIALQNNREN 292
+++ ++ + A QK + + V+NL +KL + G + + R
Sbjct: 637 MQRMSENLRGADQKPTSADCAVRAMLYSRAVRNLKKKLLPWQRRGLLRAQGLRGWKARRA 696
Query: 293 QAFSFLYEPNSQGYKYYRQKLEEFRKAKAS-----STGSFTAPDP-GLKRKSPPEALSGS 346
+ + K++ ++ +AK S PDP G + P SG
Sbjct: 697 TTGTQTLLSSGTRLKHHGRQAPGLSQAKPSLPDRNDAAKDCPPDPVGPSPQDPSLEASGP 756
Query: 347 LPPATTCPASSTPAPTIIPAPAAPGKPASAATVKRKRK--SRWGPEEDKVEL 396
P S P T P P+A + T ++ + ++ GPE ++ +
Sbjct: 757 SPKPAGVDISEAP-QTSSPCPSADIDMKTMETAEKLARFVAQVGPEIEQFSI 807
>gi|224282117 splicing factor, arginine/serine-rich 14 [Homo sapiens]
Length = 1082
Score = 80.1 bits (196), Expect = 6e-15
Identities = 39/92 (42%), Positives = 61/92 (66%), Gaps = 4/92 (4%)
Query: 542 KALKEGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVDG 601
+ + + ++P ++ + KLT +N+G+QML KMGWKEG GLGS G+GI+ PV+ GT + +G
Sbjct: 991 RPMSKKKKPKDLDFAQQKLTDKNLGFQMLQKMGWKEGHGLGSLGKGIREPVSVGTPS-EG 1049
Query: 602 AGFGIDRPAELSKEDDEYEAFRKRMMLAYRFR 633
G G D ++D ++ FR+RMM YR +
Sbjct: 1050 EGLGADGQ---EHKEDTFDVFRQRMMQMYRHK 1078
Score = 64.7 bits (156), Expect = 3e-10
Identities = 30/55 (54%), Positives = 41/55 (74%)
Query: 187 ETRKVIEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAEI 241
+T + EKLARFVA+ GPE+E+ ++E+ DNP FLHD+NS F +YRKKV E+
Sbjct: 783 KTMETAEKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSSAFKFYRKKVFEL 837
Score = 57.4 bits (137), Expect = 4e-08
Identities = 27/71 (38%), Positives = 44/71 (61%)
Query: 245 AQKSQAASQKVSPPEDEEVKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYEPNSQ 304
++ Q +S S D + AEKLARF+A GPE+E +++N+ +N FL++ NS
Sbjct: 766 SEAPQTSSPCPSADIDMKTMETAEKLARFVAQVGPEIEQFSIENSTDNPDLWFLHDQNSS 825
Query: 305 GYKYYRQKLEE 315
+K+YR+K+ E
Sbjct: 826 AFKFYRKKVFE 836
Score = 49.3 bits (116), Expect = 1e-05
Identities = 55/232 (23%), Positives = 101/232 (43%), Gaps = 21/232 (9%)
Query: 183 PEGAETRKV--IEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAE 240
P+ A+ R V I++L + V EG ++ + K++PA+ FL D+NS E+ YY+ K+AE
Sbjct: 579 PQRADHRVVGTIDQLVKRVIEGSLSPKERTL--LKEDPAYWFLSDENSLEYKYYKLKLAE 636
Query: 241 IRKEAQKSQAASQKVSPPE--------DEEVKNLAEKLARFIADGGPEVETIALQNNREN 292
+++ ++ + A QK + + V+NL +KL + G + + R
Sbjct: 637 MQRMSENLRGADQKPTSADCAVRAMLYSRAVRNLKKKLLPWQRRGLLRAQGLRGWKARRA 696
Query: 293 QAFSFLYEPNSQGYKYYRQKLEEFRKAKAS-----STGSFTAPDP-GLKRKSPPEALSGS 346
+ + K++ ++ +AK S PDP G + P SG
Sbjct: 697 TTGTQTLLSSGTRLKHHGRQAPGLSQAKPSLPDRNDAAKDCPPDPVGPSPQDPSLEASGP 756
Query: 347 LPPATTCPASSTPAPTIIPAPAAPGKPASAATVKRKRK--SRWGPEEDKVEL 396
P S P T P P+A + T ++ + ++ GPE ++ +
Sbjct: 757 SPKPAGVDISEAP-QTSSPCPSADIDMKTMETAEKLARFVAQVGPEIEQFSI 807
>gi|119226260 calcium homeostasis endoplasmic reticulum protein
[Homo sapiens]
Length = 916
Score = 64.7 bits (156), Expect = 3e-10
Identities = 50/167 (29%), Positives = 81/167 (48%), Gaps = 28/167 (16%)
Query: 257 PPEDEEVKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYEPNSQGYKYYRQKLEEF 316
PP+D+E++N+ +KLA+F+A GPE E + ++ ++N FSFL+ + Y YY+ KL
Sbjct: 6 PPDDQELRNVIDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLF--GGEFYSYYKCKL--- 60
Query: 317 RKAKASSTGSFTAPDPGLKRKSPPEALSGSLPPATTCPASSTPAPTIIPAPAAPGKPASA 376
+ K+++P L PA T P P P APAAP PA
Sbjct: 61 ---------ALEQQQLICKQQTP------ELEPAATMP----PLPQPPLAPAAPIPPAQG 101
Query: 377 ATVKRK--RKSRWGPEEDKVELPPAELVQRDVDASPSPLSVQDLKGL 421
A + ++S+W ++ + L L Q V A+ + Q ++ L
Sbjct: 102 APSMDELIQQSQWNLQQQEQHL--LALRQEQVTAAVAHAVEQQMQKL 146
Score = 60.5 bits (145), Expect = 5e-09
Identities = 30/58 (51%), Positives = 38/58 (65%), Gaps = 2/58 (3%)
Query: 182 PPEGAETRKVIEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVA 239
PP+ E R VI+KLA+FVA GPE EK+ ME KDNP F+FL + YY+ K+A
Sbjct: 6 PPDDQELRNVIDKLAQFVARNGPEFEKMTMEKQKDNPKFSFLF--GGEFYSYYKCKLA 61
Score = 48.9 bits (115), Expect = 1e-05
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 6/73 (8%)
Query: 559 KLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTT-----TVDGAGFGIDRPAELS 613
+L EN G+QML+KMGW GLG++ QGI++P+ G G G +D P E
Sbjct: 838 RLGEENKGHQMLVKMGWSGSGGLGAKEQGIQDPIKGGDVRDKWDQYKGVGVALDDPYENY 897
Query: 614 KEDDEYEAFRKRM 626
+ + Y +F RM
Sbjct: 898 RRNKSY-SFIARM 909
>gi|5032087 splicing factor 3a, subunit 1, 120kDa isoform 1 [Homo
sapiens]
Length = 793
Score = 62.4 bits (150), Expect = 1e-09
Identities = 57/229 (24%), Positives = 97/229 (42%), Gaps = 46/229 (20%)
Query: 141 GPVKSYSHAKQLPVAHR-PSVFQSPDEDEEEDYEQWLEIKVSPPEGAETRKVIEKLARFV 199
GPV++ +P + P+ ++ +++ + + I PPE R +++K A FV
Sbjct: 4 GPVQAVPPPPPVPTEPKQPTEEEASSKEDSAPSKPVVGIIYPPPE---VRNIVDKTASFV 60
Query: 200 AEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAEIRK-EAQKSQAASQKVS-- 256
A GPE E ++ +NP F FL+ N YYR KV+E ++ +AQ+ AA KV
Sbjct: 61 ARNGPEFEARIRQNEINNPKFNFLNP-NDPYHAYYRHKVSEFKEGKAQEPSAAIPKVMQQ 119
Query: 257 ---------------------------PPEDEEVKN----------LAEKLARFIADGGP 279
PPE E + + + + A+F+A G
Sbjct: 120 QQQTTQQQLPQKVQAQVIQETIVPKEPPPEFEFIADPPSISAFDLDVVKLTAQFVARNGR 179
Query: 280 EVETIALQNNRENQAFSFLYEPNSQGYKYYRQKLEEFRKAKASSTGSFT 328
+ T +Q + N F FL P + Y+ + +E++ K G F+
Sbjct: 180 QFLTQLMQKEQRNYQFDFL-RPQHSLFNYFTKLVEQYTKILIPPKGLFS 227
>gi|53831995 splicing factor 3a, subunit 1, 120kDa isoform 2 [Homo
sapiens]
Length = 728
Score = 60.1 bits (144), Expect = 6e-09
Identities = 48/189 (25%), Positives = 81/189 (42%), Gaps = 31/189 (16%)
Query: 141 GPVKSYSHAKQLPVAHR-PSVFQSPDEDEEEDYEQWLEIKVSPPEGAETRKVIEKLARFV 199
GPV++ +P + P+ ++ +++ + + I PPE R +++K A FV
Sbjct: 4 GPVQAVPPPPPVPTEPKQPTEEEASSKEDSAPSKPVVGIIYPPPE---VRNIVDKTASFV 60
Query: 200 AEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAEIRKEAQKSQAASQKVSPPE 259
A GPE E ++ +NP F FL + N YYR KV+E +
Sbjct: 61 ARNGPEFEARIRQNEINNPKFNFL-NPNDPYHAYYRHKVSEFK----------------- 102
Query: 260 DEEVKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYEPNSQGYKYYRQKLEEFRKA 319
E A+F+A G + T +Q + N F FL P + Y+ + +E++ K
Sbjct: 103 --------EGKAQFVARNGRQFLTQLMQKEQRNYQFDFL-RPQHSLFNYFTKLVEQYTKI 153
Query: 320 KASSTGSFT 328
G F+
Sbjct: 154 LIPPKGLFS 162
>gi|5032031 RNA binding motif protein 5 [Homo sapiens]
Length = 815
Score = 48.9 bits (115), Expect = 1e-05
Identities = 43/133 (32%), Positives = 59/133 (44%), Gaps = 15/133 (11%)
Query: 499 QLRRMEMDKTREWAEQLTKMGRGKHFIGDFLPPDELEKFMETFKALKEGREPDYSEYKEF 558
+LR EM AE+ K G + PP+ K K G +Y + +
Sbjct: 693 ELREREMKYRDRAAERREKYGIPE-------PPEPKRK-----KQFDAGTV-NYEQPTKD 739
Query: 559 KLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVDGAGFGIDRPA-ELSKEDD 617
+ NIG +ML MGW+EG GLG + QGI P+ + + GAG G A LS D
Sbjct: 740 GIDHSNIGNKMLQAMGWREGSGLGRKCQGITAPI-EAQVRLKGAGLGAKGSAYGLSGADS 798
Query: 618 EYEAFRKRMMLAY 630
+A RK M +
Sbjct: 799 YKDAVRKAMFARF 811
>gi|20127479 RNA binding motif protein 10 isoform 1 [Homo sapiens]
Length = 930
Score = 48.9 bits (115), Expect = 1e-05
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 551 DYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVDGAGFG 605
D+ + L +NIG +ML MGWKEG GLG + QGI P+ + T V G+G G
Sbjct: 847 DFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPI-EAQTRVRGSGLG 900
>gi|23111018 RNA binding motif protein 10 isoform 2 [Homo sapiens]
Length = 852
Score = 48.9 bits (115), Expect = 1e-05
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 551 DYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVDGAGFG 605
D+ + L +NIG +ML MGWKEG GLG + QGI P+ + T V G+G G
Sbjct: 769 DFEQPTRDGLGSDNIGSRMLQAMGWKEGSGLGRKKQGIVTPI-EAQTRVRGSGLG 822
>gi|63003897 transcription factor NRF [Homo sapiens]
Length = 690
Score = 48.1 bits (113), Expect = 2e-05
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 546 EGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVN-KGTTTVDGAGF 604
+GR + + YK+ ++ +NIG Q+L KMGW G GLG G+GI+ P++ K +G G
Sbjct: 537 QGRSAEEA-YKQ-QIKEDNIGNQLLRKMGW-TGGGLGKSGEGIREPISVKEQHKREGLGL 593
Query: 605 GIDRPAELSKEDDE 618
++R +++K D E
Sbjct: 594 DVERVNKIAKRDIE 607
>gi|39725952 angiogenic factor VG5Q [Homo sapiens]
Length = 714
Score = 47.8 bits (112), Expect = 3e-05
Identities = 23/52 (44%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 559 KLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVDGAGFGIDRPA 610
++T N G +ML KMGWK+GEGLG +G G+K P+ AG G +P+
Sbjct: 616 EITDSNKGRKMLEKMGWKKGEGLGKDGGGMKTPIQLQLRRTH-AGLGTGKPS 666
>gi|56788356 tuftelin interacting protein 11 [Homo sapiens]
Length = 837
Score = 46.6 bits (109), Expect = 7e-05
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 547 GREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVDGA--GF 604
G + ++ ++ + IG ++L KMG+ G GLG QGI NP+ GA +
Sbjct: 134 GGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVGAY 193
Query: 605 GIDRPAE-------LSKEDDEYEAFRKRMMLAYRFRPNPLNNPRRPYY 645
G +R + + E++ E F+K + ++R +P + ++P Y
Sbjct: 194 GSERTTQSMQDFPVVDSEEEAEEEFQKELS---QWRKDPSGSKKKPKY 238
>gi|8393259 tuftelin interacting protein 11 [Homo sapiens]
Length = 837
Score = 46.6 bits (109), Expect = 7e-05
Identities = 28/108 (25%), Positives = 52/108 (48%), Gaps = 12/108 (11%)
Query: 547 GREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVDGA--GF 604
G + ++ ++ + IG ++L KMG+ G GLG QGI NP+ GA +
Sbjct: 134 GGTKSFMDFGSWERHTKGIGQKLLQKMGYVPGRGLGKNAQGIINPIEAKQRKGKGAVGAY 193
Query: 605 GIDRPAE-------LSKEDDEYEAFRKRMMLAYRFRPNPLNNPRRPYY 645
G +R + + E++ E F+K + ++R +P + ++P Y
Sbjct: 194 GSERTTQSMQDFPVVDSEEEAEEEFQKELS---QWRKDPSGSKKKPKY 238
>gi|167900474 coiled-coil domain containing 75 [Homo sapiens]
Length = 259
Score = 45.1 bits (105), Expect = 2e-04
Identities = 29/86 (33%), Positives = 44/86 (51%), Gaps = 4/86 (4%)
Query: 542 KALKEGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVDG 601
K+LKE + + L EN G+ +L KMG+K G+ LG G GI P+ T
Sbjct: 49 KSLKEEEQERRDIGLKNALGCENKGFALLQKMGYKSGQALGKSGGGIVEPIPLNIKT--- 105
Query: 602 AGFGIDRPAELS-KEDDEYEAFRKRM 626
GI A L K +++ E++RK++
Sbjct: 106 GKSGIGHEASLKRKAEEKLESYRKKI 131
>gi|122937227 U2-associated SR140 protein [Homo sapiens]
Length = 1029
Score = 43.5 bits (101), Expect = 6e-04
Identities = 26/87 (29%), Positives = 40/87 (45%), Gaps = 3/87 (3%)
Query: 158 PSVFQSPDEDEEEDYEQWLE---IKVSPPEGAETRKVIEKLARFVAEGGPELEKVAMEDY 214
P+ P +ED+E+ L +KV P +I ++ FV GP E + M
Sbjct: 394 PNAPMLPPPKNKEDFEKTLSQAIVKVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNRE 453
Query: 215 KDNPAFAFLHDKNSREFLYYRKKVAEI 241
+NP F FL + + +YYR K+ I
Sbjct: 454 INNPMFRFLFENQTPAHVYYRWKLYSI 480
Score = 40.0 bits (92), Expect = 0.007
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 17/93 (18%)
Query: 254 KVSPPEDEEVKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYEPNSQGYKYYRQKL 313
KV P + + L ++ F+ GP E + + N F FL+E + + YYR KL
Sbjct: 418 KVVIPTERNLLALIHRMIEFVVREGPMFEAMIMNREINNPMFRFLFENQTPAHVYYRWKL 477
Query: 314 --------------EEFRKAKASSTGSFTAPDP 332
E+FR K GSF P P
Sbjct: 478 YSILQGDSPTKWRTEDFRMFK---NGSFWRPPP 507
>gi|8922313 G patch domain containing 2 [Homo sapiens]
Length = 528
Score = 43.1 bits (100), Expect = 8e-04
Identities = 21/50 (42%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 564 NIGYQMLMKMGWKEGEGLGSEGQGIKNPVNKGTTTVDGAGFGIDRPAELS 613
NIG +ML MGW G GLG +G+GI P+ + G G G P S
Sbjct: 469 NIGNRMLQNMGWTPGSGLGRDGKGISEPI-QAMQRPKGLGLGFPLPKSTS 517
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 41.2 bits (95), Expect = 0.003
Identities = 18/79 (22%), Positives = 43/79 (54%)
Query: 443 KQLKEQQEMQQMYDMIMQHKRAMQDMQLLWEKAVQQHQHGYDSDEEVDSELGTWEHQLRR 502
+QL++QQ++QQ + Q ++ +Q Q L ++ +QQ Q ++ +L + QL++
Sbjct: 3898 QQLQQQQQLQQQQQLQQQQQQQLQQQQQLQQQQLQQQQQQQQLQQQQQQQLQQQQQQLQQ 3957
Query: 503 MEMDKTREWAEQLTKMGRG 521
+ + +++ +Q + G
Sbjct: 3958 QQQQQQQQFQQQQQQQQMG 3976
Score = 31.6 bits (70), Expect = 2.4
Identities = 23/78 (29%), Positives = 28/78 (35%), Gaps = 5/78 (6%)
Query: 328 TAPDPGLKRKSPPEALSGSLPPATTCPASSTPA-----PTIIPAPAAPGKPASAATVKRK 382
T+P P R SPP S PP P S P P +P +P S + +
Sbjct: 563 TSPPPEASRLSPPPEESPMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPE 622
Query: 383 RKSRWGPEEDKVELPPAE 400
P ED PP E
Sbjct: 623 ASRLSPPPEDSPMSPPPE 640
Score = 31.6 bits (70), Expect = 2.4
Identities = 24/85 (28%), Positives = 32/85 (37%), Gaps = 4/85 (4%)
Query: 329 APDPGLKRKSPPEALSGSLPPATTCPASSTPAPTIIPAPAAPGKPASAATVKRKRKSRWG 388
+P P + R SP +S PP P S P + P +P AS + +
Sbjct: 645 SPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEES----PTSPPPEASRLSPPPEDSPTSP 700
Query: 389 PEEDKVELPPAELVQRDVDASPSPL 413
P ED PP E + SPL
Sbjct: 701 PPEDSPASPPPEDSLMSLPLEESPL 725
Score = 31.6 bits (70), Expect = 2.4
Identities = 16/68 (23%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 436 ELSDAQKKQLKEQQEMQQMYDMIMQHKRAMQDMQLLWEKAVQQHQHGYDSDEEVDSELGT 495
+L Q++QL++QQ++QQ +Q ++ Q +Q ++ +QQ Q ++ +
Sbjct: 3911 QLQQQQQQQLQQQQQLQQQQ---LQQQQQQQQLQQQQQQQLQQQQQQLQQQQQQQQQQFQ 3967
Query: 496 WEHQLRRM 503
+ Q ++M
Sbjct: 3968 QQQQQQQM 3975
Score = 31.2 bits (69), Expect = 3.1
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 328 TAPDPGLKRKSPPEALSGSLPPATTCPASSTPAPTIIPAP 367
T+P P R SPP S + PP PAS P +++ P
Sbjct: 680 TSPPPEASRLSPPPEDSPTSPPPEDSPASPPPEDSLMSLP 719
Score = 29.6 bits (65), Expect = 9.0
Identities = 27/98 (27%), Positives = 33/98 (33%), Gaps = 18/98 (18%)
Query: 329 APDPGLKRKSPPEALSGSLPPATTCPASSTP--------------APTIIPAPAAPGKPA 374
+P P R SPP S PP P S P +P +P +P
Sbjct: 618 SPPPEASRLSPPPEDSPMSPPPEESPMSPPPEVSRLSPLPVVSRLSPPPEESPLSPPPEE 677
Query: 375 SAATVKRKRKSRWGPEEDKVELPPAELVQRDVDASPSP 412
S + + P ED PP E D ASP P
Sbjct: 678 SPTSPPPEASRLSPPPEDSPTSPPPE----DSPASPPP 711
>gi|21396500 HIRA interacting protein 3 [Homo sapiens]
Length = 556
Score = 41.2 bits (95), Expect = 0.003
Identities = 57/282 (20%), Positives = 101/282 (35%), Gaps = 27/282 (9%)
Query: 356 SSTPAPTIIPAPAAPGKPASAATVKRKRKSRWGPEEDKVELPPAELVQRDVDASPSP-LS 414
S +P PA G A + K + R VE E QRD+ A S
Sbjct: 104 SEASSPDYFGPPAKNGVAAEVSPAKEENPRR---ASKAVEESSDEERQRDLPAQRGEESS 160
Query: 415 VQDLKGL-GYEKGKPVGLVGVTELSDAQKKQLKEQQEMQQMYDMIMQHKRAM-------- 465
++ KG G + KPV + +KQ +E+ E + + K+
Sbjct: 161 EEEEKGYKGKTRKKPVVKKQAPGKASVSRKQAREESEESEAEPVQRTAKKVEGNKGTKSL 220
Query: 466 ------QDMQLLWEKAVQQHQHGYDSDEEVDSELGTWEHQLRRMEMDKTREWAEQLTKMG 519
+ ++L +K Q+ + + ++E D E G W+ + R K+ +
Sbjct: 221 KESEQESEEEILAQKKEQREEEVEEEEKEEDEEKGDWKPRTRSNGRRKSAREERSCKQKS 280
Query: 520 RGKHFIGDFLPPDELEKFMETFKALKEGREPDYSEYKEFKLTVENIGYQMLMKMGWKEGE 579
+ K +GD +E ++ + REP E + ++ G ++ G
Sbjct: 281 QAKRLLGDSDSEEEQKEAASSGDDSGRDREPPVQRKSEDRTQLKG-GKRL-------SGS 332
Query: 580 GLGSEGQGIKNPVNKGTTTVDGAGFGIDRPAELSKEDDEYEA 621
E G P KG+ + G ++L +E + EA
Sbjct: 333 SEDEEDSGKGEPTAKGSRKMARLGSTSGEESDLEREVSDSEA 374
>gi|217416350 cask-interacting protein 2 isoform b [Homo sapiens]
Length = 1120
Score = 40.8 bits (94), Expect = 0.004
Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Query: 321 ASSTGSFTAPDPGLKRKSPPEALSGSLPPATTCPASSTPAPTIIPAPAA--PGKPASAAT 378
AS+T AP P P A S P ++ PA P P + P+PA P P
Sbjct: 930 ASATPGPAAPLPSPTPGESPPASSLPQPEPSSLPAQGVPTP-LAPSPAMQPPVPPCPGPG 988
Query: 379 VKRKRKSRWGPEEDKVELPPAELVQRDVDASPSPLSV 415
++ SRW E + P A L +P P+SV
Sbjct: 989 LESSAASRWNGETEPPAAPAALLKVPGAGTAPKPVSV 1025
>gi|217416347 cask-interacting protein 2 isoform a [Homo sapiens]
Length = 1202
Score = 40.8 bits (94), Expect = 0.004
Identities = 30/97 (30%), Positives = 40/97 (41%), Gaps = 3/97 (3%)
Query: 321 ASSTGSFTAPDPGLKRKSPPEALSGSLPPATTCPASSTPAPTIIPAPAA--PGKPASAAT 378
AS+T AP P P A S P ++ PA P P + P+PA P P
Sbjct: 1012 ASATPGPAAPLPSPTPGESPPASSLPQPEPSSLPAQGVPTP-LAPSPAMQPPVPPCPGPG 1070
Query: 379 VKRKRKSRWGPEEDKVELPPAELVQRDVDASPSPLSV 415
++ SRW E + P A L +P P+SV
Sbjct: 1071 LESSAASRWNGETEPPAAPAALLKVPGAGTAPKPVSV 1107
>gi|33946327 nucleoporin 214kDa [Homo sapiens]
Length = 2090
Score = 40.4 bits (93), Expect = 0.005
Identities = 44/180 (24%), Positives = 70/180 (38%), Gaps = 21/180 (11%)
Query: 275 ADGGPEVETIALQNNRENQAFS--FLYEPNSQGYKYYRQKLEEFRKAKASSTGSFTAPD- 331
A G ++ET + FS F + P+ G+ F + + +FTA
Sbjct: 1190 ASGTAKIETAVTSTPSASGQFSKPFSFSPSGTGFN--------FGIITPTPSSNFTAAQG 1241
Query: 332 --PGLKRKSPPEALS---GSLPPATTCPASSTPAPTIIPAPAAPGKP-ASAATVKRKRKS 385
P K S P+A S GS P P SS P+ + PG+P AS++ +
Sbjct: 1242 ATPSTKESSQPDAFSSGGGSKPSYEAIPESSPPSGITSASNTTPGEPAASSSRPVAPSGT 1301
Query: 386 RWGPEEDKVELPPAELVQRDVDASPSPLSVQDLKGL----GYEKGKPVGLVGVTELSDAQ 441
K+E PP++L + +S + ++ GL + KP T L+ Q
Sbjct: 1302 ALSTTSSKLETPPSKLGELLFPSSLAGETLGSFSGLRVGQADDSTKPTNKASSTSLTSTQ 1361
>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
sapiens]
Length = 459
Score = 40.0 bits (92), Expect = 0.007
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 319 AKASSTGSFTAPDPGLKRKSPPEALSGSLPPATTCPASSTPAPTIIPAPAAPGKPASAAT 378
A+AS G FT+ + G ++ P G P S+ AP P+PA PG +SA
Sbjct: 123 ARASPGGGFTSAE-GKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSATR 181
Query: 379 VKRKRKS 385
V R R+S
Sbjct: 182 VPRARRS 188
>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
sapiens]
Length = 459
Score = 40.0 bits (92), Expect = 0.007
Identities = 24/67 (35%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Query: 319 AKASSTGSFTAPDPGLKRKSPPEALSGSLPPATTCPASSTPAPTIIPAPAAPGKPASAAT 378
A+AS G FT+ + G ++ P G P S+ AP P+PA PG +SA
Sbjct: 123 ARASPGGGFTSAE-GKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSATR 181
Query: 379 VKRKRKS 385
V R R+S
Sbjct: 182 VPRARRS 188
>gi|239745089 PREDICTED: golgi autoantigen, golgin subfamily a-like
[Homo sapiens]
Length = 828
Score = 40.0 bits (92), Expect = 0.007
Identities = 34/137 (24%), Positives = 68/137 (49%), Gaps = 16/137 (11%)
Query: 441 QKKQLKEQQEMQQMYDMIMQHKRAMQDMQLLW---------EKAVQQHQHGYDSDEEV-D 490
QK++L EQ++MQ+ + I + + ++D + +W EK +Q ++ +E++ D
Sbjct: 438 QKEKLWEQEKMQEQEEKIWEQEEKIRDQEEMWGQEKKMWRQEKMREQEDQMWEQEEKMRD 497
Query: 491 SELGTWEHQLRRMEMD-KTREWAEQL---TKMGRGKHFIGDFLPPDELEKFMETFKALKE 546
E W+ + R E D + RE E++ KM + + + + E EK +T+ ++
Sbjct: 498 QEQKMWDQEERMWEQDERLREKEERMREQKKMWQQEEKMREEKKTQEQEK--KTWDQEEK 555
Query: 547 GREPDYSEYKEFKLTVE 563
RE + +E K+ E
Sbjct: 556 MREEERMREREKKMREE 572
Score = 30.0 bits (66), Expect = 6.9
Identities = 25/134 (18%), Positives = 59/134 (44%), Gaps = 9/134 (6%)
Query: 441 QKKQLKEQQEMQQMYDMIMQHKRAMQDMQLLWEKAVQQHQHGYDSDEEVDSELGTWEHQL 500
Q+K+L+EQ+++++ + + + + M + + EK +Q + + +E + + Q
Sbjct: 295 QEKELREQKKLREQEEQMQEQEEKMWEQE---EKMREQEEKMWRQEERLWEQEKQMREQE 351
Query: 501 RRMEMDKTREW------AEQLTKMGRGKHFIGDFLPPDELEKFMETFKALKEGREPDYSE 554
++M + R W E+ +M + E E+ E K ++E E +
Sbjct: 352 QKMRDQEERMWEQDERLREKEERMREQEKMWEQEEKMQEEERIREREKKMREEEETMREQ 411
Query: 555 YKEFKLTVENIGYQ 568
++ + EN+ Q
Sbjct: 412 EEKMQKQEENMWEQ 425
>gi|47825361 non-specific cytotoxic cell receptor protein 1 homolog
[Homo sapiens]
Length = 275
Score = 40.0 bits (92), Expect = 0.007
Identities = 29/92 (31%), Positives = 40/92 (43%), Gaps = 12/92 (13%)
Query: 313 LEEFRKAKASSTGSFTAPDPGLKRKSPPEALSGSLPPATTCPASSTPAPTIIPAPAAPGK 372
+EE R+ A G A P ++ PP S S PP+ P+P +P+PAAP
Sbjct: 1 MEEVREGHALG-GGMEADGPASLQELPPSPRSPSPPPSPP----PLPSPPSLPSPAAPEA 55
Query: 373 P-------ASAATVKRKRKSRWGPEEDKVELP 397
P S A ++ WGP +ELP
Sbjct: 56 PELPEPAQPSEAHARQLLLEEWGPLSGGLELP 87
>gi|55750053 atrophin-1 [Homo sapiens]
Length = 1190
Score = 39.7 bits (91), Expect = 0.009
Identities = 40/118 (33%), Positives = 51/118 (43%), Gaps = 35/118 (29%)
Query: 320 KASSTGSF-TAPDPGLKRKSPPEALSGSLP----------PATTCPASST-------PA- 360
+A S G++ TA PG K SPP +G+ P P T P S T PA
Sbjct: 642 RAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAG 701
Query: 361 ----PTIIPAPAAP--GKPASAATVKRKRKSRWGPEEDKVELPPAELVQRDVDASPSP 412
P++ P PAAP G P SA +K++ + E V PPA SPSP
Sbjct: 702 PSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPV--PPAR--------SPSP 749
>gi|55750041 atrophin-1 [Homo sapiens]
Length = 1190
Score = 39.7 bits (91), Expect = 0.009
Identities = 40/118 (33%), Positives = 51/118 (43%), Gaps = 35/118 (29%)
Query: 320 KASSTGSF-TAPDPGLKRKSPPEALSGSLP----------PATTCPASST-------PA- 360
+A S G++ TA PG K SPP +G+ P P T P S T PA
Sbjct: 642 RAPSPGAYKTATPPGYKPGSPPSFRTGTPPGYRGTSPPAGPGTFKPGSPTVGPGPLPPAG 701
Query: 361 ----PTIIPAPAAP--GKPASAATVKRKRKSRWGPEEDKVELPPAELVQRDVDASPSP 412
P++ P PAAP G P SA +K++ + E V PPA SPSP
Sbjct: 702 PSGLPSLPPPPAAPASGPPLSATQIKQEPAEEYETPESPV--PPAR--------SPSP 749
>gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]
Length = 951
Score = 39.7 bits (91), Expect = 0.009
Identities = 31/98 (31%), Positives = 44/98 (44%), Gaps = 5/98 (5%)
Query: 183 PEGAETRKVIEKLARFVAEGGPELEKVAMEDYKDNPAFAFLHDKNSREFLYYRKKVAEIR 242
P + + VI+KLA +VA G + E K++ F FL + Y KK ++
Sbjct: 451 PPPPDVQPVIDKLAEYVARNGLKFETSVRA--KNDQRFEFLQPWHQYNAYYEFKKQFFLQ 508
Query: 243 KEAQKSQAASQKVSPPEDEEVKNLAEKLARFIADGGPE 280
KE S Q VS PE+ + EK + DG PE
Sbjct: 509 KEGGDSM---QAVSAPEEAPTDSAPEKPSDAGEDGAPE 543
Score = 32.7 bits (73), Expect = 1.1
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 6/86 (6%)
Query: 255 VSPPEDEEVKNLAEKLARFIADGGPEVETIALQNNRENQAFSFLYEPNSQGYKYYRQKLE 314
+ PP D V+ + +KLA ++A G + ET N +Q F FL +P Q YY K +
Sbjct: 450 IPPPPD--VQPVIDKLAEYVARNGLKFETSVRAKN--DQRFEFL-QPWHQYNAYYEFKKQ 504
Query: 315 EF-RKAKASSTGSFTAPDPGLKRKSP 339
F +K S + +AP+ +P
Sbjct: 505 FFLQKEGGDSMQAVSAPEEAPTDSAP 530
>gi|163965366 nascent polypeptide-associated complex alpha subunit
isoform a [Homo sapiens]
Length = 2078
Score = 39.7 bits (91), Expect = 0.009
Identities = 28/95 (29%), Positives = 39/95 (41%), Gaps = 5/95 (5%)
Query: 318 KAKASSTGSFTAPDPGLKRKSPPEALSGSLPPATTCPASSTPAPTIIPAPAAPGKPASAA 377
K ++T S T P P K P A++ P T P TP P+++ P PA+ A
Sbjct: 847 KDSPATTHSPTPPSP--KGAPTPSAVTPLSPKGVTLPPKETPTPSVVNLPFPKEGPATPA 904
Query: 378 TVKRKRKSRWGPEEDKVELPPAELVQRDVDASPSP 412
+ S K PA + + ASPSP
Sbjct: 905 PKQAPALSMTSSSPKKARATPA---PKGIPASPSP 936
Score = 31.2 bits (69), Expect = 3.1
Identities = 28/112 (25%), Positives = 38/112 (33%), Gaps = 13/112 (11%)
Query: 328 TAPDP-GLKRKSPPEALSGSLPPATTCPA----------SSTPAPTIIPAPAAPGKPASA 376
T P P G SPP+ PPA T P+ P P + P+ G P
Sbjct: 1293 TPPSPKGGPATSPPKG--APTPPAATPPSPKGSPGTPPPKGAPTPPAVTPPSPKGTPTLP 1350
Query: 377 ATVKRKRKSRWGPEEDKVELPPAELVQRDVDASPSPLSVQDLKGLGYEKGKP 428
AT + P + PPA + +P S + + KG P
Sbjct: 1351 ATTPSSKGGPTTPSSKEGPTPPAATPSHKGGPAMTPPSPKRGPAIPSPKGDP 1402
Score = 31.2 bits (69), Expect = 3.1
Identities = 32/104 (30%), Positives = 36/104 (34%), Gaps = 16/104 (15%)
Query: 323 STGSFTAPDPGLKRKSPPEALSGSLPPATTCP------ASSTPAPTIIPAPAAPGKPASA 376
ST TAP RK P S + P CP S P T+ PAP P + S+
Sbjct: 1692 STPIITAPT----RKGPQTKKSSATSPPI-CPDPSAKNGSKGPLSTVAPAPLLPVQKDSS 1746
Query: 377 ATVKRKRKSR-----WGPEEDKVELPPAELVQRDVDASPSPLSV 415
T K K S P E K P V P SV
Sbjct: 1747 KTAKGKDASHSPKGPLAPPESKASTPLTAAAFEKVLPKPESASV 1790
>gi|38158015 mastermind-like 3 [Homo sapiens]
Length = 1133
Score = 38.9 bits (89), Expect = 0.015
Identities = 37/150 (24%), Positives = 59/150 (39%), Gaps = 12/150 (8%)
Query: 338 SPPEALSGSLPPATTCPASSTPAPTIIPAPAAPGKPASAATVKRKRKSRWGPEEDKVELP 397
SP S S PP +T +++T P++ PAAP +S A + + P
Sbjct: 373 SPQARPSSSGPPFSTV-STATSLPSVASTPAAPNPASSPANCAVQSPQTPNQAHTPGQAP 431
Query: 398 PAELVQRDVDASPSPLSVQDLKGLGYEKGKPVGLVGVTELSDAQKKQLKEQQEMQQMYDM 457
P +P+ ++V G G V V + +QLK+ QQ
Sbjct: 432 PRP--GNGYLLNPAAVTVA---------GSASGPVAVPSSDMSPAEQLKQMAAQQQQRAK 480
Query: 458 IMQHKRAMQDMQLLWEKAVQQHQHGYDSDE 487
+MQ K+ Q Q ++ QQ Q S++
Sbjct: 481 LMQQKQQQQQQQQQQQQQQQQQQQQQHSNQ 510
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.311 0.129 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,878,335
Number of Sequences: 37866
Number of extensions: 1556288
Number of successful extensions: 12760
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 101
Number of HSP's successfully gapped in prelim test: 522
Number of HSP's that attempted gapping in prelim test: 10451
Number of HSP's gapped (non-prelim): 2705
length of query: 645
length of database: 18,247,518
effective HSP length: 109
effective length of query: 536
effective length of database: 14,120,124
effective search space: 7568386464
effective search space used: 7568386464
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.