Search of human proteins with 33469137

Search of human proteins with 33469137

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|33469137 solute carrier family 35, member E2 [Homo sapiens]
         (266 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|33469137 solute carrier family 35, member E2 [Homo sapiens]        531   e-151
gi|160707905 similar to solute carrier family 35, member E2 [Hom...   388   e-108
gi|47827222 solute carrier family 35, member E4 [Homo sapiens]         42   4e-04
gi|223671915 GDP-fucose transporter 1 isoform a [Homo sapiens]         40   0.002
gi|223671919 GDP-fucose transporter 1 isoform b [Homo sapiens]         40   0.002
gi|223671917 GDP-fucose transporter 1 isoform b [Homo sapiens]         40   0.002
gi|164607128 solute carrier family 35, member E1 [Homo sapiens]        36   0.031
gi|13540547 solute carrier family 2 member 10 [Homo sapiens]           31   0.98 
gi|169217659 PREDICTED: similar to ectonucleotide pyrophosphatas...    31   1.3  
gi|169167316 PREDICTED: similar to ectonucleotide pyrophosphatas...    31   1.3  
gi|62988322 TSPY-like 1 [Homo sapiens]                                 30   1.7  
gi|62632750 ATPase, class VI, type 11B [Homo sapiens]                  30   2.2  
gi|13540590 family with sequence similarity 117, member A [Homo ...    30   2.9  
gi|187828564 BEN domain containing 5 [Homo sapiens]                    30   2.9  
gi|197927233 transmembrane protein 20 isoform 1 [Homo sapiens]         30   2.9  
gi|23397492 transmembrane protein 20 isoform 2 [Homo sapiens]          30   2.9  
gi|187761334 hypothetical protein LOC57828 [Homo sapiens]              29   3.7  
gi|226495417 coiled-coil domain containing 102A [Homo sapiens]         29   3.7  
gi|4557329 fas ligand [Homo sapiens]                                   29   3.7  
gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]       29   4.9  
gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]            28   6.4  
gi|116686120 periaxin isoform 2 [Homo sapiens]                         28   6.4  
gi|224593756 hypothetical protein LOC164127 [Homo sapiens]             28   8.3  
gi|73858561 proline/serine-rich coiled-coil 1 isoform a [Homo sa...    28   8.3  
gi|73858559 proline/serine-rich coiled-coil 1 isoform c [Homo sa...    28   8.3  
gi|14249168 proline/serine-rich coiled-coil 1 isoform a [Homo sa...    28   8.3  
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ...    28   8.3  
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ...    28   8.3  
gi|31795544 origin recognition complex, subunit 1 [Homo sapiens]       28   8.3  

>gi|33469137 solute carrier family 35, member E2 [Homo sapiens]
          Length = 266

 Score =  531 bits (1368), Expect = e-151
 Identities = 266/266 (100%), Positives = 266/266 (100%)

Query: 1   MSSSVKTPALEELVPGSEEKPKGRSPLSWGSLFGHRSEKIVFAKSDGGTDENVLTVTITE 60
           MSSSVKTPALEELVPGSEEKPKGRSPLSWGSLFGHRSEKIVFAKSDGGTDENVLTVTITE
Sbjct: 1   MSSSVKTPALEELVPGSEEKPKGRSPLSWGSLFGHRSEKIVFAKSDGGTDENVLTVTITE 60

Query: 61  TTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGC 120
           TTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGC
Sbjct: 61  TTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGC 120

Query: 121 VKTLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAP 180
           VKTLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAP
Sbjct: 121 VKTLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAP 180

Query: 181 IFTVIMSRMILGEYTGRPSDREEREELQLQPGRGAAASDRRSPVPPSERHGVRPHGENLP 240
           IFTVIMSRMILGEYTGRPSDREEREELQLQPGRGAAASDRRSPVPPSERHGVRPHGENLP
Sbjct: 181 IFTVIMSRMILGEYTGRPSDREEREELQLQPGRGAAASDRRSPVPPSERHGVRPHGENLP 240

Query: 241 GDFQVPQALHRVALSMALPCPMLPAS 266
           GDFQVPQALHRVALSMALPCPMLPAS
Sbjct: 241 GDFQVPQALHRVALSMALPCPMLPAS 266


>gi|160707905 similar to solute carrier family 35, member E2 [Homo
           sapiens]
          Length = 405

 Score =  388 bits (997), Expect = e-108
 Identities = 196/196 (100%), Positives = 196/196 (100%)

Query: 1   MSSSVKTPALEELVPGSEEKPKGRSPLSWGSLFGHRSEKIVFAKSDGGTDENVLTVTITE 60
           MSSSVKTPALEELVPGSEEKPKGRSPLSWGSLFGHRSEKIVFAKSDGGTDENVLTVTITE
Sbjct: 1   MSSSVKTPALEELVPGSEEKPKGRSPLSWGSLFGHRSEKIVFAKSDGGTDENVLTVTITE 60

Query: 61  TTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGC 120
           TTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGC
Sbjct: 61  TTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGC 120

Query: 121 VKTLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAP 180
           VKTLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAP
Sbjct: 121 VKTLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAP 180

Query: 181 IFTVIMSRMILGEYTG 196
           IFTVIMSRMILGEYTG
Sbjct: 181 IFTVIMSRMILGEYTG 196


>gi|47827222 solute carrier family 35, member E4 [Homo sapiens]
          Length = 350

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 31/121 (25%), Positives = 54/121 (44%), Gaps = 12/121 (9%)

Query: 73  SRALLYLTLWFFFSFCTLFLNKYILSLLG-GEPSMLGAVQMLSTTVIGCVKTLVPCCLYQ 131
           +R  +   +W         LNK+I ++ G G P +L A+ ML    + C           
Sbjct: 47  ARVAMAALVWLLAGASMSSLNKWIFTVHGFGRPLLLSALHML-VAALAC----------H 95

Query: 132 HKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMIL 191
             AR   P      +L + L    ++  G V L+ V +  A+ V ++ P+FT+ +S ++L
Sbjct: 96  RGARRPMPGGTRCRVLLLSLTFGTSMACGNVGLRAVPLDLAQLVTTTTPLFTLALSALLL 155

Query: 192 G 192
           G
Sbjct: 156 G 156


>gi|223671915 GDP-fucose transporter 1 isoform a [Homo sapiens]
          Length = 364

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 15/129 (11%)

Query: 77  LYLTLWFFFSFCTLFLNKYIL---SLLGGEPSMLGAVQMLSTTVIGC--VKTLVPCCLYQ 131
           L ++L++  S   +FLNKY+L   SL    P  +   Q L TT++ C  +  L  CC   
Sbjct: 43  LVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLL-CKGLSALAACC--- 98

Query: 132 HKARLSYPPNFLMTMLFVGLMRFATVVLGLVS-----LKNVAVSFAETVKSSAPIFTVIM 186
               + +P   L   +   ++  + V +G+++     LK V V+F    +S   +F V++
Sbjct: 99  -PGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLL 157

Query: 187 SRMILGEYT 195
           S ++L + T
Sbjct: 158 SYLLLKQTT 166


>gi|223671919 GDP-fucose transporter 1 isoform b [Homo sapiens]
          Length = 351

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 15/129 (11%)

Query: 77  LYLTLWFFFSFCTLFLNKYIL---SLLGGEPSMLGAVQMLSTTVIGC--VKTLVPCCLYQ 131
           L ++L++  S   +FLNKY+L   SL    P  +   Q L TT++ C  +  L  CC   
Sbjct: 30  LVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLL-CKGLSALAACC--- 85

Query: 132 HKARLSYPPNFLMTMLFVGLMRFATVVLGLVS-----LKNVAVSFAETVKSSAPIFTVIM 186
               + +P   L   +   ++  + V +G+++     LK V V+F    +S   +F V++
Sbjct: 86  -PGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLL 144

Query: 187 SRMILGEYT 195
           S ++L + T
Sbjct: 145 SYLLLKQTT 153


>gi|223671917 GDP-fucose transporter 1 isoform b [Homo sapiens]
          Length = 351

 Score = 40.4 bits (93), Expect = 0.002
 Identities = 35/129 (27%), Positives = 63/129 (48%), Gaps = 15/129 (11%)

Query: 77  LYLTLWFFFSFCTLFLNKYIL---SLLGGEPSMLGAVQMLSTTVIGC--VKTLVPCCLYQ 131
           L ++L++  S   +FLNKY+L   SL    P  +   Q L TT++ C  +  L  CC   
Sbjct: 30  LVVSLYWVTSISMVFLNKYLLDSPSLRLDTPIFVTFYQCLVTTLL-CKGLSALAACC--- 85

Query: 132 HKARLSYPPNFLMTMLFVGLMRFATVVLGLVS-----LKNVAVSFAETVKSSAPIFTVIM 186
               + +P   L   +   ++  + V +G+++     LK V V+F    +S   +F V++
Sbjct: 86  -PGAVDFPSLRLDLRVARSVLPLSVVFIGMITFNNLCLKYVGVAFYNVGRSLTTVFNVLL 144

Query: 187 SRMILGEYT 195
           S ++L + T
Sbjct: 145 SYLLLKQTT 153


>gi|164607128 solute carrier family 35, member E1 [Homo sapiens]
          Length = 410

 Score = 36.2 bits (82), Expect = 0.031
 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 139 PPNFLMT-MLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGE 193
           PP F    +L +   ++   V   VS+  V VS+A TVK++ PI+ V++SR+I+ E
Sbjct: 104 PPRFYPRYVLPLAFGKYFASVSAHVSIWKVPVSYAHTVKATMPIWVVLLSRIIMKE 159


>gi|13540547 solute carrier family 2 member 10 [Homo sapiens]
          Length = 541

 Score = 31.2 bits (69), Expect = 0.98
 Identities = 26/71 (36%), Positives = 35/71 (49%), Gaps = 7/71 (9%)

Query: 195 TGRPSDREEREELQLQPGRGAAASDRRSPVPPSERHGVRPHGENLPGDFQVPQALHRVAL 254
           TG P D    ++  L P       D+R P+  + +   +PH  +  GD   P A  R+AL
Sbjct: 339 TGLPGDSGLLQDSSLPP-IPRTNEDQREPILSTAKK-TKPHPRS--GD---PSAPPRLAL 391

Query: 255 SMALPCPMLPA 265
           S ALP P LPA
Sbjct: 392 SSALPGPPLPA 402


>gi|169217659 PREDICTED: similar to ectonucleotide
           pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
          Length = 542

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 12/33 (36%), Positives = 21/33 (63%)

Query: 222 SPVPPSERHGVRPHGENLPGDFQVPQALHRVAL 254
           +P P SE HG+ P   + P   ++P++ HR+A+
Sbjct: 268 APGPASEDHGLAPGPSSNPPQLRLPESAHRLAV 300


>gi|169167316 PREDICTED: similar to ectonucleotide
           pyrophosphatase/phosphodiesterase 5 [Homo sapiens]
          Length = 542

 Score = 30.8 bits (68), Expect = 1.3
 Identities = 12/33 (36%), Positives = 21/33 (63%)

Query: 222 SPVPPSERHGVRPHGENLPGDFQVPQALHRVAL 254
           +P P SE HG+ P   + P   ++P++ HR+A+
Sbjct: 268 APGPASEDHGLAPGPSSNPPQLRLPESAHRLAV 300


>gi|62988322 TSPY-like 1 [Homo sapiens]
          Length = 437

 Score = 30.4 bits (67), Expect = 1.7
 Identities = 20/70 (28%), Positives = 34/70 (48%), Gaps = 6/70 (8%)

Query: 169 VSFAETVKSSAPIFT--VIMSRMILGEYTG----RPSDREEREELQLQPGRGAAASDRRS 222
           +S  + VK + P+ T  +I+S  +  +       R  D+ E  ++  +PG G + +    
Sbjct: 1   MSGLDGVKRTTPLQTHSIIISDQVPSDQDAHQYLRLRDQSEATQVMAEPGEGGSETVALP 60

Query: 223 PVPPSERHGV 232
           P PPSE  GV
Sbjct: 61  PPPPSEEGGV 70


>gi|62632750 ATPase, class VI, type 11B [Homo sapiens]
          Length = 1177

 Score = 30.0 bits (66), Expect = 2.2
 Identities = 18/79 (22%), Positives = 39/79 (49%), Gaps = 2/79 (2%)

Query: 53   VLTVTITETTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQM 112
            V+ +T+T    +E+    W +  + + ++ F+F F +LF    +   LG +      +Q+
Sbjct: 1008 VMVITVTVKMALETHFWTWINHLVTWGSIIFYFVF-SLFYGGILWPFLGSQNMYFVFIQL 1066

Query: 113  LST-TVIGCVKTLVPCCLY 130
            LS+ +    +  +V  CL+
Sbjct: 1067 LSSGSAWFAIILMVVTCLF 1085


>gi|13540590 family with sequence similarity 117, member A [Homo
           sapiens]
          Length = 453

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 5/59 (8%)

Query: 211 PGRGAAASDRRSPVPP----SERHGVRPHGENLPGDFQVP-QALHRVALSMALPCPMLP 264
           PGRG A   RR   PP    S R G++P    +P   Q P Q       + ++PC + P
Sbjct: 16  PGRGGAGGLRRGCSPPAPAGSPRAGLQPLRATIPFQLQQPHQRRDGGGRAASVPCSVAP 74


>gi|187828564 BEN domain containing 5 [Homo sapiens]
          Length = 421

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 14/44 (31%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 11 EELVPGSEEKPKGRSPLSWGSLFGHRSEKIVFAKSDGGTDENVL 54
          EEL  G E  P  R+P  WG+L  H+++ +  A+     + +V+
Sbjct: 45 EELGAGPESPP--RAPRDWGALLLHKAQILALAEDKSDLENSVM 86


>gi|197927233 transmembrane protein 20 isoform 1 [Homo sapiens]
          Length = 365

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 23/111 (20%), Positives = 53/111 (47%), Gaps = 10/111 (9%)

Query: 83  FFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGCVKTLVPCCLYQHKARLSYPPNF 142
           F FS  +LF+ K            + AV++ +   +  +  ++PC +Y+ K     P   
Sbjct: 80  FLFSVGSLFVKKV---------QDVHAVEISAFRCVFQMLVVIPCLIYR-KTGFIGPKGQ 129

Query: 143 LMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGE 193
            + ++  G++    ++L   + + ++++ A  +  S+P+FT I + + L E
Sbjct: 130 RIFLILRGVLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKE 180


>gi|23397492 transmembrane protein 20 isoform 2 [Homo sapiens]
          Length = 364

 Score = 29.6 bits (65), Expect = 2.9
 Identities = 23/111 (20%), Positives = 53/111 (47%), Gaps = 10/111 (9%)

Query: 83  FFFSFCTLFLNKYILSLLGGEPSMLGAVQMLSTTVIGCVKTLVPCCLYQHKARLSYPPNF 142
           F FS  +LF+ K            + AV++ +   +  +  ++PC +Y+ K     P   
Sbjct: 79  FLFSVGSLFVKKV---------QDVHAVEISAFRCVFQMLVVIPCLIYR-KTGFIGPKGQ 128

Query: 143 LMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGE 193
            + ++  G++    ++L   + + ++++ A  +  S+P+FT I + + L E
Sbjct: 129 RIFLILRGVLGSTAMMLIYYAYQTMSLADATVITFSSPVFTSIFAWICLKE 179


>gi|187761334 hypothetical protein LOC57828 [Homo sapiens]
          Length = 1159

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 34/141 (24%), Positives = 55/141 (39%), Gaps = 19/141 (13%)

Query: 55  TVTITETTVIESDLGVWSSRALLYLTLWFFFSFCTLFLNKYILSLLGGEPSMLGAVQMLS 114
           T TI +T   ES L +  ++ + Y T     ++ TL+                G+   + 
Sbjct: 294 TATIYDTIATESTLFIRQNQLVYYFT----GTYTTLYERNR------------GSGSWIR 337

Query: 115 TTVIGCVKTLVPCCLYQHKARLSYPPNFLMTMLFVGLMRFATVVLGLVSLKNVAVSFAET 174
                C+K L P  +Y H     Y    L T    G + F T+  G VS + +   ++  
Sbjct: 338 VLASECIKKLCP--VYFHSNGSEYIMA-LTTGKHEGYVHFGTIRDGQVSFEMLPRQWSVC 394

Query: 175 VKSSAPIFTVIMSRMILGEYT 195
            +      ++I S  I GEYT
Sbjct: 395 EQIGVTTCSIIWSEYIAGEYT 415


>gi|226495417 coiled-coil domain containing 102A [Homo sapiens]
          Length = 550

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 18/53 (33%), Positives = 24/53 (45%)

Query: 204 REELQLQPGRGAAASDRRSPVPPSERHGVRPHGENLPGDFQVPQALHRVALSM 256
           RE  +L+  RG A   R  P P +ER  VR  G   P   Q  + +  +  SM
Sbjct: 155 RELARLRGARGVADQTRDGPEPEAEREPVRDVGSERPPGSQELELVESLLKSM 207


>gi|4557329 fas ligand [Homo sapiens]
          Length = 281

 Score = 29.3 bits (64), Expect = 3.7
 Identities = 21/90 (23%), Positives = 42/90 (46%), Gaps = 4/90 (4%)

Query: 143 LMTMLFVGLMRFATVVLGLVSLKNVAVSFAETVKSSAPIFTVIMSRMILGEYTGRPSDRE 202
           L+ M F+ L+    + LG+  L ++    AE  +S++ + T       L +  G PS   
Sbjct: 83  LLVMFFMVLVALVGLGLGMFQLFHLQKELAELRESTSQMHTA----SSLEKQIGHPSPPP 138

Query: 203 EREELQLQPGRGAAASDRRSPVPPSERHGV 232
           E++EL+        ++ R  P+   + +G+
Sbjct: 139 EKKELRKVAHLTGKSNSRSMPLEWEDTYGI 168


>gi|61676188 HECT, UBA and WWE domain containing 1 [Homo sapiens]
          Length = 4374

 Score = 28.9 bits (63), Expect = 4.9
 Identities = 15/40 (37%), Positives = 20/40 (50%)

Query: 198  PSDREEREELQLQPGRGAAASDRRSPVPPSERHGVRPHGE 237
            P+  E  +ELQ   G G +++    PV P E    RP GE
Sbjct: 2778 PALGEVPQELQSPAGEGGSSTQLLMPVEPEELGPTRPSGE 2817


>gi|239753839 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 257

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 12/19 (63%), Positives = 14/19 (73%)

Query: 211 PGRGAAASDRRSPVPPSER 229
           PGRG AA+ RRSP P + R
Sbjct: 108 PGRGRAAATRRSPAPGTAR 126


>gi|116686120 periaxin isoform 2 [Homo sapiens]
          Length = 1461

 Score = 28.5 bits (62), Expect = 6.4
 Identities = 19/53 (35%), Positives = 24/53 (45%), Gaps = 4/53 (7%)

Query: 172  AETVKSSAPIFTVIMSRMILGEYTGRPSDREEREELQLQPGRGAAASDRRSPV 224
            A++ K   P      S M+ GE +  P + EE EE     G G  AS RR  V
Sbjct: 1326 AKSPKLRLPRVGFSQSEMVTGEGSPSPEEEEEEEE----EGSGEGASGRRGRV 1374


>gi|224593756 hypothetical protein LOC164127 [Homo sapiens]
          Length = 623

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 188 RMILGEYTGRPSDREEREELQLQPGRGAAASDRRSPVPPSE-RHGVRPHGENLPGDFQVP 246
           R++L +   +  ++E+R+ LQ    RG     +R  VPP E R   +P  +  P   ++ 
Sbjct: 303 RLLLRQSQEQWQEKEQRKTLQSPEQRGLRRDSQRKNVPPGESRWKEQPEDQESPRQEKLE 362

Query: 247 QA 248
           +A
Sbjct: 363 KA 364


>gi|73858561 proline/serine-rich coiled-coil 1 isoform a [Homo
           sapiens]
          Length = 333

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 5/49 (10%)

Query: 197 RPSDREEREELQLQPGRGAAASDRRS-----PVPPSERHGVRPHGENLP 240
           RP+ R       + PGRGA   D  S     P P +  H VR  G  +P
Sbjct: 255 RPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVP 303


>gi|73858559 proline/serine-rich coiled-coil 1 isoform c [Homo
           sapiens]
          Length = 363

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 5/49 (10%)

Query: 197 RPSDREEREELQLQPGRGAAASDRRS-----PVPPSERHGVRPHGENLP 240
           RP+ R       + PGRGA   D  S     P P +  H VR  G  +P
Sbjct: 285 RPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVP 333


>gi|14249168 proline/serine-rich coiled-coil 1 isoform a [Homo
           sapiens]
          Length = 333

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 17/49 (34%), Positives = 21/49 (42%), Gaps = 5/49 (10%)

Query: 197 RPSDREEREELQLQPGRGAAASDRRS-----PVPPSERHGVRPHGENLP 240
           RP+ R       + PGRGA   D  S     P P +  H VR  G  +P
Sbjct: 255 RPASRMPLTSRSVPPGRGALPPDSLSTRKGLPRPSTAGHRVRESGHKVP 303


>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
           sapiens]
          Length = 459

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 195 TGRPSDREEREELQLQPGRGAAASDRRSPVP 225
           T  P+    R+  QLQPGRG +   RR+ +P
Sbjct: 52  TLEPTPLLRRKAAQLQPGRGKSCGARRAALP 82


>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
           sapiens]
          Length = 459

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 195 TGRPSDREEREELQLQPGRGAAASDRRSPVP 225
           T  P+    R+  QLQPGRG +   RR+ +P
Sbjct: 52  TLEPTPLLRRKAAQLQPGRGKSCGARRAALP 82


>gi|31795544 origin recognition complex, subunit 1 [Homo sapiens]
          Length = 861

 Score = 28.1 bits (61), Expect = 8.3
 Identities = 18/75 (24%), Positives = 31/75 (41%)

Query: 165 KNVAVSFAETVKSSAPIFTVIMSRMILGEYTGRPSDREEREELQLQPGRGAAASDRRSPV 224
           +N A S    ++  + + T+   R  L       SD+EE+E L       +++ +  +  
Sbjct: 369 QNEATSTPHRIRRKSSVLTMNRIRQQLRFLGNSKSDQEEKEILPAAEISDSSSDEEEAST 428

Query: 225 PPSERHGVRPHGENL 239
           PP  R   R    NL
Sbjct: 429 PPLPRRAPRTVSRNL 443


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.135    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,765,736
Number of Sequences: 37866
Number of extensions: 501501
Number of successful extensions: 1638
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 1623
Number of HSP's gapped (non-prelim): 30
length of query: 266
length of database: 18,247,518
effective HSP length: 100
effective length of query: 166
effective length of database: 14,460,918
effective search space: 2400512388
effective search space used: 2400512388
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.