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Search of human proteins with 33457344
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33457344 component of oligomeric golgi complex 6 isoform 1
[Homo sapiens]
(657 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33457344 component of oligomeric golgi complex 6 isoform 1 [H... 1276 0.0
gi|223468630 component of oligomeric golgi complex 6 isoform 2 [... 1181 0.0
gi|55770834 centromere protein F [Homo sapiens] 47 7e-05
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 42 0.001
gi|31982906 cingulin-like 1 [Homo sapiens] 40 0.005
gi|81295809 pericentrin [Homo sapiens] 39 0.015
gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo... 38 0.026
gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo... 38 0.026
gi|21735548 centrosomal protein 2 [Homo sapiens] 37 0.044
gi|157785668 coiled-coil domain containing 39 [Homo sapiens] 37 0.044
gi|55770888 early endosome antigen 1, 162kD [Homo sapiens] 37 0.058
gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [... 37 0.058
gi|45446749 kinesin family member 5A [Homo sapiens] 36 0.098
gi|187607364 tuftelin 1 isoform 2 [Homo sapiens] 36 0.098
gi|9910596 tuftelin 1 isoform 1 [Homo sapiens] 36 0.098
gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo sap... 36 0.13
gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens] 36 0.13
gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens] 35 0.17
gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo... 35 0.22
gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo... 35 0.22
gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens] 35 0.22
gi|237858621 polyamine modulated factor 1 binding protein 1 isof... 35 0.22
gi|237858619 polyamine modulated factor 1 binding protein 1 isof... 35 0.22
gi|14249254 EF-hand calcium binding domain 4B isoform c [Homo sa... 35 0.22
gi|222418793 EF-hand calcium binding domain 4B isoform b [Homo s... 35 0.22
gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo s... 35 0.22
gi|19924131 RAD50 homolog isoform 2 [Homo sapiens] 35 0.29
gi|19924129 RAD50 homolog isoform 1 [Homo sapiens] 35 0.29
gi|90819229 cutaneous T-cell lymphoma-associated antigen 1 isofo... 35 0.29
gi|239747109 PREDICTED: hypothetical protein XP_002344496 [Homo ... 35 0.29
>gi|33457344 component of oligomeric golgi complex 6 isoform 1 [Homo
sapiens]
Length = 657
Score = 1276 bits (3301), Expect = 0.0
Identities = 657/657 (100%), Positives = 657/657 (100%)
Query: 1 MAEGSGEVVAVSATGAANGLNNGAGGTSATTCNPLSRKLHKILETRLDNDKEMLEALKAL 60
MAEGSGEVVAVSATGAANGLNNGAGGTSATTCNPLSRKLHKILETRLDNDKEMLEALKAL
Sbjct: 1 MAEGSGEVVAVSATGAANGLNNGAGGTSATTCNPLSRKLHKILETRLDNDKEMLEALKAL 60
Query: 61 STFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEELESISEDVQAMSNCCQDMTS 120
STFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEELESISEDVQAMSNCCQDMTS
Sbjct: 61 STFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEELESISEDVQAMSNCCQDMTS 120
Query: 121 RLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLSKFQLTSDEMSLLRGTREGPITE 180
RLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLSKFQLTSDEMSLLRGTREGPITE
Sbjct: 121 RLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLSKFQLTSDEMSLLRGTREGPITE 180
Query: 181 DFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQMALLQETAYERLYRWAQSECRTLTQE 240
DFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQMALLQETAYERLYRWAQSECRTLTQE
Sbjct: 181 DFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQMALLQETAYERLYRWAQSECRTLTQE 240
Query: 241 SCDVSPVLTQAMEALQDRPVLYKYTLDEFGTARRSTVVRGFIDALTRGGPGGTPRPIEMH 300
SCDVSPVLTQAMEALQDRPVLYKYTLDEFGTARRSTVVRGFIDALTRGGPGGTPRPIEMH
Sbjct: 241 SCDVSPVLTQAMEALQDRPVLYKYTLDEFGTARRSTVVRGFIDALTRGGPGGTPRPIEMH 300
Query: 301 SHDPLRYVGDMLAWLHQATASEKEHLEALLKHVTTQGVEENIQEVVGHITEGVCRPLKVR 360
SHDPLRYVGDMLAWLHQATASEKEHLEALLKHVTTQGVEENIQEVVGHITEGVCRPLKVR
Sbjct: 301 SHDPLRYVGDMLAWLHQATASEKEHLEALLKHVTTQGVEENIQEVVGHITEGVCRPLKVR 360
Query: 361 IEQVIVAEPGAVLLYKISNLLKFYHHTISGIVGNSATALLTTIEEMHLLSKKIFFNSLSL 420
IEQVIVAEPGAVLLYKISNLLKFYHHTISGIVGNSATALLTTIEEMHLLSKKIFFNSLSL
Sbjct: 361 IEQVIVAEPGAVLLYKISNLLKFYHHTISGIVGNSATALLTTIEEMHLLSKKIFFNSLSL 420
Query: 421 HASKLMDKVELPPPDLGPSSALNQTLMLLREVLASHDSSVVPLDARQADFVQVLSCVLDP 480
HASKLMDKVELPPPDLGPSSALNQTLMLLREVLASHDSSVVPLDARQADFVQVLSCVLDP
Sbjct: 421 HASKLMDKVELPPPDLGPSSALNQTLMLLREVLASHDSSVVPLDARQADFVQVLSCVLDP 480
Query: 481 LLQMCTVSASNLGTADMATFMVNSLYMMKTTLALFEFTDRRLEMLQFQIEAHLDTLINEQ 540
LLQMCTVSASNLGTADMATFMVNSLYMMKTTLALFEFTDRRLEMLQFQIEAHLDTLINEQ
Sbjct: 481 LLQMCTVSASNLGTADMATFMVNSLYMMKTTLALFEFTDRRLEMLQFQIEAHLDTLINEQ 540
Query: 541 ASYVLTRVGLSYIYNTVQQHKPEQGSLANMPNLDSVTLKAAMVQFDRYLSAPDNLLIPQL 600
ASYVLTRVGLSYIYNTVQQHKPEQGSLANMPNLDSVTLKAAMVQFDRYLSAPDNLLIPQL
Sbjct: 541 ASYVLTRVGLSYIYNTVQQHKPEQGSLANMPNLDSVTLKAAMVQFDRYLSAPDNLLIPQL 600
Query: 601 NFLLSATVKEQIVKQSTELVCRAYGEVYAAVMNPINEYKDPENILHRSPQQVQTLLS 657
NFLLSATVKEQIVKQSTELVCRAYGEVYAAVMNPINEYKDPENILHRSPQQVQTLLS
Sbjct: 601 NFLLSATVKEQIVKQSTELVCRAYGEVYAAVMNPINEYKDPENILHRSPQQVQTLLS 657
>gi|223468630 component of oligomeric golgi complex 6 isoform 2
[Homo sapiens]
Length = 615
Score = 1181 bits (3055), Expect = 0.0
Identities = 609/609 (100%), Positives = 609/609 (100%)
Query: 1 MAEGSGEVVAVSATGAANGLNNGAGGTSATTCNPLSRKLHKILETRLDNDKEMLEALKAL 60
MAEGSGEVVAVSATGAANGLNNGAGGTSATTCNPLSRKLHKILETRLDNDKEMLEALKAL
Sbjct: 1 MAEGSGEVVAVSATGAANGLNNGAGGTSATTCNPLSRKLHKILETRLDNDKEMLEALKAL 60
Query: 61 STFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEELESISEDVQAMSNCCQDMTS 120
STFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEELESISEDVQAMSNCCQDMTS
Sbjct: 61 STFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEELESISEDVQAMSNCCQDMTS 120
Query: 121 RLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLSKFQLTSDEMSLLRGTREGPITE 180
RLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLSKFQLTSDEMSLLRGTREGPITE
Sbjct: 121 RLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLSKFQLTSDEMSLLRGTREGPITE 180
Query: 181 DFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQMALLQETAYERLYRWAQSECRTLTQE 240
DFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQMALLQETAYERLYRWAQSECRTLTQE
Sbjct: 181 DFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQMALLQETAYERLYRWAQSECRTLTQE 240
Query: 241 SCDVSPVLTQAMEALQDRPVLYKYTLDEFGTARRSTVVRGFIDALTRGGPGGTPRPIEMH 300
SCDVSPVLTQAMEALQDRPVLYKYTLDEFGTARRSTVVRGFIDALTRGGPGGTPRPIEMH
Sbjct: 241 SCDVSPVLTQAMEALQDRPVLYKYTLDEFGTARRSTVVRGFIDALTRGGPGGTPRPIEMH 300
Query: 301 SHDPLRYVGDMLAWLHQATASEKEHLEALLKHVTTQGVEENIQEVVGHITEGVCRPLKVR 360
SHDPLRYVGDMLAWLHQATASEKEHLEALLKHVTTQGVEENIQEVVGHITEGVCRPLKVR
Sbjct: 301 SHDPLRYVGDMLAWLHQATASEKEHLEALLKHVTTQGVEENIQEVVGHITEGVCRPLKVR 360
Query: 361 IEQVIVAEPGAVLLYKISNLLKFYHHTISGIVGNSATALLTTIEEMHLLSKKIFFNSLSL 420
IEQVIVAEPGAVLLYKISNLLKFYHHTISGIVGNSATALLTTIEEMHLLSKKIFFNSLSL
Sbjct: 361 IEQVIVAEPGAVLLYKISNLLKFYHHTISGIVGNSATALLTTIEEMHLLSKKIFFNSLSL 420
Query: 421 HASKLMDKVELPPPDLGPSSALNQTLMLLREVLASHDSSVVPLDARQADFVQVLSCVLDP 480
HASKLMDKVELPPPDLGPSSALNQTLMLLREVLASHDSSVVPLDARQADFVQVLSCVLDP
Sbjct: 421 HASKLMDKVELPPPDLGPSSALNQTLMLLREVLASHDSSVVPLDARQADFVQVLSCVLDP 480
Query: 481 LLQMCTVSASNLGTADMATFMVNSLYMMKTTLALFEFTDRRLEMLQFQIEAHLDTLINEQ 540
LLQMCTVSASNLGTADMATFMVNSLYMMKTTLALFEFTDRRLEMLQFQIEAHLDTLINEQ
Sbjct: 481 LLQMCTVSASNLGTADMATFMVNSLYMMKTTLALFEFTDRRLEMLQFQIEAHLDTLINEQ 540
Query: 541 ASYVLTRVGLSYIYNTVQQHKPEQGSLANMPNLDSVTLKAAMVQFDRYLSAPDNLLIPQL 600
ASYVLTRVGLSYIYNTVQQHKPEQGSLANMPNLDSVTLKAAMVQFDRYLSAPDNLLIPQL
Sbjct: 541 ASYVLTRVGLSYIYNTVQQHKPEQGSLANMPNLDSVTLKAAMVQFDRYLSAPDNLLIPQL 600
Query: 601 NFLLSATVK 609
NFLLSATVK
Sbjct: 601 NFLLSATVK 609
>gi|55770834 centromere protein F [Homo sapiens]
Length = 3114
Score = 46.6 bits (109), Expect = 7e-05
Identities = 52/242 (21%), Positives = 108/242 (44%), Gaps = 12/242 (4%)
Query: 36 SRKLHKILETRLDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFK 95
S K IL+ R+D+ + LE+ K +++ ++ ++G+IE + + S
Sbjct: 821 SPKNSAILQNRVDSLEFSLESQKQMNSD-LQKQCEELVQIKGEIEENLMKAEQMHQSFVA 879
Query: 96 EVKEELESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADA 155
E + + + ED A N + S L+ +++ Q L K Q+E Q+L+ + +
Sbjct: 880 ETSQRISKLQEDTSAHQNVVAETLSALENKEKELQLLNDKVETEQAEIQELKKSNHLLED 939
Query: 156 FLSKFQLTSDEMSLLRGTREGPIT------EDFFKALGRVKQIH---NDVKVLLRTNQQT 206
L + QL S+ +SL + I+ E+ + G +K+I+ N K+ L ++
Sbjct: 940 SLKELQLLSETLSLEKKEMSSIISLNKREIEELTQENGTLKEINASLNQEKMNLIQKSES 999
Query: 207 AGLEIMEQMALLQETAYERLYRWAQSECRTLTQESCDVSPVLTQAMEALQDRPVLYKYTL 266
I E+ + E + + Y+ + +E+ + L+Q +A Q++ + L
Sbjct: 1000 FANYIDEREKSISELSDQ--YKQEKLILLQRCEETGNAYEDLSQKYKAAQEKNSKLECLL 1057
Query: 267 DE 268
+E
Sbjct: 1058 NE 1059
Score = 37.4 bits (85), Expect = 0.044
Identities = 51/240 (21%), Positives = 107/240 (44%), Gaps = 14/240 (5%)
Query: 101 LESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLSKF 160
L+ + Q + N ++ RLQ +++ + + K +LQ + +K ++ + L+K
Sbjct: 280 LDQLKAQNQELRNKINELELRLQGHEKEMKGQVNKFQELQLQLEKAKVELIEKEKVLNKC 339
Query: 161 QLTSDEMSLLRGTREGPITEDFFKALG-RVKQIHNDVKVLLRTNQQTAGLEIMEQMALLQ 219
+ DE L+R T + + AL ++K++ D+ R N ++A + +++ +
Sbjct: 340 R---DE--LVRTTAQYDQASTKYTALEQKLKKLTEDLSCQ-RQNAESARCSLEQKIKEKE 393
Query: 220 ETAYERLYRWAQSECRTLTQESCDVSPVLTQAMEALQDRPVLYKYTLDEFGTARR--STV 277
+ E L R Q +TL QE + LTQ ++ ++ + + LD+ + ++
Sbjct: 394 KEFQEELSR-QQRSFQTLDQECIQMKARLTQELQQAKNMHNVLQAELDKLTSVKQQLENN 452
Query: 278 VRGFIDALTRGGPGGTPRPIE----MHSHDPLRYVGDMLAWLHQATASEKEHLEALLKHV 333
+ F L R I+ S + ++ ++L + A E HLEA LK++
Sbjct: 453 LEEFKQKLCRAEQAFQASQIKENELRRSMEEMKKENNLLKSHSEQKAREVCHLEAELKNI 512
Score = 36.2 bits (82), Expect = 0.098
Identities = 35/147 (23%), Positives = 73/147 (49%), Gaps = 18/147 (12%)
Query: 65 VENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEELESISEDVQAMSNCCQDMTSRLQA 124
++ L + ++L + E+ + I EE + + ++ +L+ ++E V A+ C D +
Sbjct: 2229 LDKLLSSFKSLLEEKEQAEIQIKEESKTAVEMLQNQLKELNEAVAAL---CGD--QEIMK 2283
Query: 125 AKEQTQD-LIVKTTKLQSESQKLEIRAQVADAFLSKFQLTSDEMSLLRGTREGPITEDFF 183
A EQ+ D I + +L++ +KL R + + ++ +L+ +E D
Sbjct: 2284 ATEQSLDPPIEEEHQLRNSIEKLRARLEADE---------KKQLCVLQQLKESEHHADLL 2334
Query: 184 KALGRVKQIHNDVKVLLRTNQQTAGLE 210
K GRV+ + ++++ RTNQ+ A LE
Sbjct: 2335 K--GRVENLERELEI-ARTNQEHAALE 2358
Score = 31.2 bits (69), Expect = 3.2
Identities = 32/144 (22%), Positives = 63/144 (43%), Gaps = 11/144 (7%)
Query: 31 TCNPLSRKLHKILETRLDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEF 90
T N R LH ++E R + +L +K L + ++ + IE +
Sbjct: 1779 TSNENLRLLH-VIEDRDRKVESLLNEMKELDSKLHLQEVQLMTKIEACIELEK------- 1830
Query: 91 VSIFKEVKEELESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRA 150
I E+K+E +SE ++ S Q++ R++ ++ DL + K E + A
Sbjct: 1831 --IVGELKKENSDLSEKLEYFSCDHQELLQRVETSEGLNSDLEMHADKSSREDIGDNV-A 1887
Query: 151 QVADAFLSKFQLTSDEMSLLRGTR 174
+V D++ +F +E+S +R +
Sbjct: 1888 KVNDSWKERFLDVENELSRIRSEK 1911
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 42.4 bits (98), Expect = 0.001
Identities = 34/143 (23%), Positives = 62/143 (43%), Gaps = 5/143 (3%)
Query: 66 ENSLRTRRNLRGDIERKSLAINEEF---VSIFKEVKEELESISEDVQAMSNCCQDMTSRL 122
EN L L+ + + L + E+ + E +E ++ Q + C D+ +R+
Sbjct: 865 ENRLTEMETLQSQLMAEKLQLQEQLQAETELCAEAEELRARLTAKKQELEEICHDLEARV 924
Query: 123 QAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLSKFQL--TSDEMSLLRGTREGPITE 180
+ +E+ Q L + K+Q Q+LE + + ++ K QL + E L + E I E
Sbjct: 925 EEEEERCQHLQAEKKKMQQNIQELEEQLEEEESARQKLQLEKVTTEAKLKKLEEEQIILE 984
Query: 181 DFFKALGRVKQIHNDVKVLLRTN 203
D L + K++ D TN
Sbjct: 985 DQNCKLAKEKKLLEDRIAEFTTN 1007
Score = 31.2 bits (69), Expect = 3.2
Identities = 24/86 (27%), Positives = 42/86 (48%), Gaps = 8/86 (9%)
Query: 89 EFVSIFKEVKEELESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKL-- 146
EF + E +E+ +S+++ D+ RL+ ++Q Q+L KL+ +S L
Sbjct: 1003 EFTTNLTEEEEKSKSLAKLKNKHEAMITDLEERLRREEKQRQELEKTRRKLEGDSTDLSD 1062
Query: 147 ---EIRAQVADAFLSKFQLTSDEMSL 169
E++AQ+A+ K QL E L
Sbjct: 1063 QIAELQAQIAEL---KMQLAKKEEEL 1085
>gi|31982906 cingulin-like 1 [Homo sapiens]
Length = 1302
Score = 40.4 bits (93), Expect = 0.005
Identities = 44/212 (20%), Positives = 95/212 (44%), Gaps = 23/212 (10%)
Query: 51 KEMLEALKALSTFFV-----ENSLRTRRN----LRGDIERKSLAINEEFVSIFKEVKEEL 101
+E+L+A + L + E+ LR R L+G ++ + + ++E + ++ EL
Sbjct: 730 EELLQAKQDLQDLLIAKEEQEDLLRKRERELTALKGALKEEVSSHDQEMDKLKEQYDAEL 789
Query: 102 ESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLSKFQ 161
+++ E V+ + + + SR +++ ++ LQ E++KL+ R++ + +++ Q
Sbjct: 790 QALRESVEEATKNVEVLASRSNTSEQDQAGTEMRVKLLQEENEKLQGRSEELERRVAQLQ 849
Query: 162 LTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQMALLQET 221
++ L+G E E K G ++Q+ + L+ ++ E+ A+
Sbjct: 850 RQIED---LKGD-EAKAKETLKKYEGEIRQLE---EALVHARKE-------EKEAVSARR 895
Query: 222 AYERLYRWAQSECRTLTQESCDVSPVLTQAME 253
A E AQ TQE +S L + E
Sbjct: 896 ALENELEAAQGNLSQTTQEQKQLSEKLKEESE 927
>gi|81295809 pericentrin [Homo sapiens]
Length = 3336
Score = 38.9 bits (89), Expect = 0.015
Identities = 36/161 (22%), Positives = 72/161 (44%), Gaps = 13/161 (8%)
Query: 40 HKILETRLDND-KEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVK 98
HK+ + L + KE +E LK + + L+ L+ D+E+ + E+ K
Sbjct: 677 HKVQLSLLQTELKEEIELLK-IENRNLYGKLQHETRLKDDLEKVKHNLIEDHQKELNNAK 735
Query: 99 EELESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLS 158
++ E + ++ Q + M LQ E+ L++ + ++ES+K I ++
Sbjct: 736 QKTELMKQEFQRKETDWKVMKEELQREAEEKLTLMLLELREKAESEKQTI--------IN 787
Query: 159 KFQLTSDEMSLLRGTREGPITE---DFFKALGRVKQIHNDV 196
KF+L EM L+ + I + + GR++Q+ D+
Sbjct: 788 KFELREAEMRQLQDQQAAQILDLERSLTEQQGRLQQLEQDL 828
>gi|153791586 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 38.1 bits (87), Expect = 0.026
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 41 KILETRLDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKE---V 97
K L+ RLD +++ ALK + R R L G++E + E + K V
Sbjct: 1797 KDLQLRLDEAEQL--ALKGGKKQIQKLEARVRE-LEGEVESEQKRNAEAVKGLRKHERRV 1853
Query: 98 KEELESISEDVQAMSNCCQDMTSRLQA-----------AKEQTQDLIVKTTKLQSESQKL 146
KE ED + + QD+ +LQA A+EQ+ + K KLQ E ++
Sbjct: 1854 KELTYQTEEDRKNILRL-QDLVDKLQAKVKSYKRQAEEAEEQSNTNLAKFRKLQHELEEA 1912
Query: 147 EIRAQVADAFLSKFQLTSDEM 167
E RA +A++ ++K ++ S E+
Sbjct: 1913 EERADIAESQVNKLRVKSREV 1933
>gi|153792663 myosin, heavy chain 2, skeletal muscle, adult [Homo
sapiens]
Length = 1941
Score = 38.1 bits (87), Expect = 0.026
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 41 KILETRLDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKE---V 97
K L+ RLD +++ ALK + R R L G++E + E + K V
Sbjct: 1797 KDLQLRLDEAEQL--ALKGGKKQIQKLEARVRE-LEGEVESEQKRNAEAVKGLRKHERRV 1853
Query: 98 KEELESISEDVQAMSNCCQDMTSRLQA-----------AKEQTQDLIVKTTKLQSESQKL 146
KE ED + + QD+ +LQA A+EQ+ + K KLQ E ++
Sbjct: 1854 KELTYQTEEDRKNILRL-QDLVDKLQAKVKSYKRQAEEAEEQSNTNLAKFRKLQHELEEA 1912
Query: 147 EIRAQVADAFLSKFQLTSDEM 167
E RA +A++ ++K ++ S E+
Sbjct: 1913 EERADIAESQVNKLRVKSREV 1933
>gi|21735548 centrosomal protein 2 [Homo sapiens]
Length = 2442
Score = 37.4 bits (85), Expect = 0.044
Identities = 49/222 (22%), Positives = 97/222 (43%), Gaps = 20/222 (9%)
Query: 43 LETRLDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEELE 102
L++ + + + +A KAL+ V + L RR D+ R+ LA +E V++ ++ ++ E
Sbjct: 371 LDSSIFSQFDYQDADKALT--LVRSVLTRRRQAVQDL-RQQLAGCQEAVNLLQQQHDQWE 427
Query: 103 SISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKL-----EIRAQ--VADA 155
E+ +A+ Q +T QT DL + L E + L E+R Q V +
Sbjct: 428 ---EEGKALRQRLQKLTGERDTLAGQTVDLQGEVDSLSKERELLQKAREELRQQLEVLEQ 484
Query: 156 FLSKFQLTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQM 215
+ + + E+ L + +G E + +++H V+ R + GLE +
Sbjct: 485 EAWRLRRVNVELQLQGDSAQGQKEE-------QQEELHLAVRERERLQEMLMGLEAKQSE 537
Query: 216 ALLQETAYERLYRWAQSECRTLTQESCDVSPVLTQAMEALQD 257
+L + + E L QE +V+ L +A +++ +
Sbjct: 538 SLSELITLREALESSHLEGELLRQEQTEVTAALARAEQSIAE 579
>gi|157785668 coiled-coil domain containing 39 [Homo sapiens]
Length = 941
Score = 37.4 bits (85), Expect = 0.044
Identities = 31/151 (20%), Positives = 72/151 (47%), Gaps = 22/151 (14%)
Query: 75 LRGDIERKSLAINEEFVSIFKEVKEELESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIV 134
L+ +E + A++E++ ++++E + ED+Q+M N + KE+ +
Sbjct: 725 LKIQLEEQKRAVDEKYRYKQRQIRE----LQEDIQSMENTLDVIEHLANNVKEKLSEKQA 780
Query: 135 KTTKLQSESQKLEIRAQVADAFLSKFQLTSDEMSLLRGTREGPITEDFFKALGRVKQIH- 193
+ +L E+++ + + + +K + E+ LL+ T++ + E K L +KQ H
Sbjct: 781 YSFQLSKETEEQKPKLERVTKQCAKL---TKEIRLLKDTKDETMEEQDIK-LREMKQFHK 836
Query: 194 -------------NDVKVLLRTNQQTAGLEI 211
+++++L+T Q +GLE+
Sbjct: 837 VIDEMLVDIIEENTEIRIILQTYFQQSGLEL 867
Score = 33.5 bits (75), Expect = 0.64
Identities = 40/175 (22%), Positives = 77/175 (44%), Gaps = 10/175 (5%)
Query: 86 INEEFVSIFKEVKEELESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSE--- 142
I+ E + K+ + +E + + + NC ++ Q +E+ + K L+SE
Sbjct: 216 IHNERQELIKQWENTIEQMQKRDGDIDNCALELARIKQETREKENLVKEKIKFLESEIGN 275
Query: 143 SQKLEIRAQVADAFLSKFQLTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLRT 202
+ + E R VAD L K + + R +G + D KA V + +D++ LR
Sbjct: 276 NTEFEKRISVADRKLLKCRTAYQDHETSRIQLKGEL--DSLKA--TVNRTSSDLEA-LRK 330
Query: 203 NQQTAGLEIMEQMALLQETAYERLYRWAQSECRTLTQESCDVSPVLTQAMEALQD 257
N +I E+ A LQ+T Q++ + +T+++ V T + L++
Sbjct: 331 NISKIKKDIHEETARLQKTKNHN--EIIQTKLKEITEKTMSVEEKATNLEDMLKE 383
Score = 32.0 bits (71), Expect = 1.9
Identities = 39/227 (17%), Positives = 93/227 (40%), Gaps = 24/227 (10%)
Query: 41 KILETRLDNDKEMLEALKALSTFFV------ENSLRTRRNLRGDIERKSLAINEEFVSIF 94
K LE+ + N+ E + + + ++ +R L+G+++ +N
Sbjct: 267 KFLESEIGNNTEFEKRISVADRKLLKCRTAYQDHETSRIQLKGELDSLKATVNR------ 320
Query: 95 KEVKEELESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVAD 154
+LE++ +++ + + T+RLQ K + + K ++ ++ +E +A +
Sbjct: 321 --TSSDLEALRKNISKIKKDIHEETARLQKTKNHNEIIQTKLKEITEKTMSVEEKATNLE 378
Query: 155 AFLSKFQLTSDE----MSLLRGT---REGPITEDFFKALGRVKQIHNDVKVLLRTNQQTA 207
L + + E ++L++G + + + K + +I L N Q
Sbjct: 379 DMLKEEEKDVKEVDVQLNLIKGVLFKKAQELQTETMKEKAVLSEIEGTRSSLKHLNHQLQ 438
Query: 208 GLEIMEQMALLQETAYERLYRWAQSECRTLTQESCDVSPVLTQAMEA 254
L+ + QE Y + + Q E R +++ +++ QA+EA
Sbjct: 439 KLDF--ETLKQQEIMYSQDFHIQQVE-RRMSRLKGEINSEEKQALEA 482
>gi|55770888 early endosome antigen 1, 162kD [Homo sapiens]
Length = 1411
Score = 37.0 bits (84), Expect = 0.058
Identities = 53/223 (23%), Positives = 99/223 (44%), Gaps = 31/223 (13%)
Query: 30 TTCNPLSRKLHKI------LETRLDNDKEML---EALKALSTFFVENSLRTRRNLRGDIE 80
T+ N L+ +L++ L+ ++ E+L EA K ++N L T +N D +
Sbjct: 621 TSVNELNSQLNESKEKVSQLDIQIKAKTELLLSAEAAKTAQRADLQNHLDTAQNALQDKQ 680
Query: 81 RKSLAINEEFVSIFKEVKEELESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQ 140
++ ++ +L+ ++ +Q C + S L+ KE+ L KT +L+
Sbjct: 681 QE-----------LNKITTQLDQVTAKLQDKQEHCSQLESHLKEYKEKYLSLEQKTEELE 729
Query: 141 SESQKLEIRAQVADAFLSKFQLTSD--EMSLLRGTREGPITEDFFKALGRVKQIHNDVKV 198
+ +KLE A + SK Q D + L E TE K L K+I + ++
Sbjct: 730 GQIKKLE--ADSLEVKASKEQALQDLQQQRQLNTDLELRATE-LSKQLEMEKEIVSSTRL 786
Query: 199 LLRTNQQTAGLEIMEQMALLQETAYERLYRWAQSECRTLTQES 241
L+ +++ LE ++Q QE + L + + TL+QE+
Sbjct: 787 DLQ--KKSEALESIKQKLTKQEEEKQIL----KQDFETLSQET 823
Score = 34.3 bits (77), Expect = 0.37
Identities = 43/239 (17%), Positives = 101/239 (42%), Gaps = 36/239 (15%)
Query: 31 TCNPLSRKLHKILETRLDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEF 90
TC L +L +E L KE+ + SL + ++ + ++ E+
Sbjct: 893 TCKELKHQLQVQMENTLKEQKEL------------KKSLEKEKEASHQLKLELNSMQEQL 940
Query: 91 V---SIFKEVKEELESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLE 147
+ + K+ ++E + + ++ + + +++A + + + +++ T+L+++ Q+
Sbjct: 941 IQAQNTLKQNEKEEQQLQGNINELKQSSEQKKKQIEALQGELKIAVLQKTELENKLQQQL 1000
Query: 148 IRAQVADAFLSKFQLTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLRTNQQTA 207
+A + +++S+L+ E +++ FK L + LL T Q
Sbjct: 1001 TQA------AQELAAEKEKISVLQNNYEK--SQETFKQL--QSDFYGRESELLATRQDLK 1050
Query: 208 GLEIMEQMALLQETA---------YERLYRWAQSECRTLTQESCDVSPVLTQAMEALQD 257
+E E+++L QE +L + ++ TL Q+S L + +ALQD
Sbjct: 1051 SVE--EKLSLAQEDLISNRNQIGNQNKLIQELKTAKATLEQDSAKKEQQLQERCKALQD 1107
>gi|153945790 myosin, heavy chain 8, skeletal muscle, perinatal [Homo
sapiens]
Length = 1937
Score = 37.0 bits (84), Expect = 0.058
Identities = 40/141 (28%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 41 KILETRLDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKE---V 97
K L+ RLD +++ ALK + R R L G++E + E + K V
Sbjct: 1794 KDLQHRLDEAEQL--ALKGGKKQIQKLEARVRE-LEGEVENEQKRNAEAVKGLRKHERRV 1850
Query: 98 KEELESISEDVQAMSNCCQDMTSRLQA-----------AKEQTQDLIVKTTKLQSESQKL 146
KE ED + + QD+ +LQA A+EQ+ + K KLQ E ++
Sbjct: 1851 KELTYQTEEDRKNVLRL-QDLVDKLQAKVKSYKRQAEEAEEQSNANLSKFRKLQHELEEA 1909
Query: 147 EIRAQVADAFLSKFQLTSDEM 167
E RA +A++ ++K ++ S E+
Sbjct: 1910 EERADIAESQVNKLRVKSREV 1930
Score = 30.4 bits (67), Expect = 5.4
Identities = 20/80 (25%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 92 SIFKEVKEELESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQ 151
++++E ++LE++ + + + D+T ++ +Q +L + K Q E +K EI+A
Sbjct: 1489 NVYEESLDQLETLRRENKNLQQEISDLTEQIAEGGKQIHEL--EKIKKQVEQEKCEIQAA 1546
Query: 152 VADAFLSKFQLTSDEMSLLR 171
+ +A S L +E +LR
Sbjct: 1547 LEEAEAS---LEHEEGKILR 1563
>gi|45446749 kinesin family member 5A [Homo sapiens]
Length = 1032
Score = 36.2 bits (82), Expect = 0.098
Identities = 40/194 (20%), Positives = 85/194 (43%), Gaps = 21/194 (10%)
Query: 37 RKLHKILETRLDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAI------NEEF 90
R+L+K L+ + D + + ++ L ++ + RGD E+ + N+
Sbjct: 422 RRLYKQLDDKDDEINQQSQLIEKLKQQMLDQE-ELLVSTRGDNEKVQRELSHLQSENDAA 480
Query: 91 VSIFKEVKEELESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLE--- 147
KEV + LE ++ + S ++ + + Q ++ + L+SE Q+L+
Sbjct: 481 KDEVKEVLQALEELAVNYDQKSQEVEEKSQQNQLLVDELSQKVATMLSLESELQRLQEVS 540
Query: 148 --IRAQVADAFLSKFQLTSDEMSLLRGTRE--------GPITEDFFKALGRVKQIHNDVK 197
R ++A+ L+ E S++ G E G I E+F A + +I ++VK
Sbjct: 541 GHQRKRIAEV-LNGLMKDLSEFSVIVGNGEIKLPVEISGAIEEEFTVARLYISKIKSEVK 599
Query: 198 VLLRTNQQTAGLEI 211
+++ +Q L++
Sbjct: 600 SVVKRCRQLENLQV 613
>gi|187607364 tuftelin 1 isoform 2 [Homo sapiens]
Length = 365
Score = 36.2 bits (82), Expect = 0.098
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 24/148 (16%)
Query: 55 EALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEELES--------ISE 106
EA L + S + RNL + R+ + + E + F + L S I+E
Sbjct: 83 EARNCLQKLREDISSKLDRNLGDSLHRQEIQVVLEKPNGFSQSPTALYSSPPEVDTCINE 142
Query: 107 DVQAMSNCCQDMTSRLQAAKEQTQD----LIVKTTKLQSES-------QKLEIRAQVADA 155
DV+++ QD+ ++LQ AK Q Q V ++ Q E+ Q+ E R + +A
Sbjct: 143 DVESLRKTVQDLLAKLQEAKRQHQSDCVAFEVTLSRYQREAEQSNVALQREEDRVEQKEA 202
Query: 156 FLSKFQ-----LTSDEMSLLRGTREGPI 178
+ + Q + ++ +LL REG +
Sbjct: 203 EVGELQRRLLGMETEHQALLAKVREGEV 230
>gi|9910596 tuftelin 1 isoform 1 [Homo sapiens]
Length = 390
Score = 36.2 bits (82), Expect = 0.098
Identities = 37/148 (25%), Positives = 65/148 (43%), Gaps = 24/148 (16%)
Query: 55 EALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEELES--------ISE 106
EA L + S + RNL + R+ + + E + F + L S I+E
Sbjct: 108 EARNCLQKLREDISSKLDRNLGDSLHRQEIQVVLEKPNGFSQSPTALYSSPPEVDTCINE 167
Query: 107 DVQAMSNCCQDMTSRLQAAKEQTQD----LIVKTTKLQSES-------QKLEIRAQVADA 155
DV+++ QD+ ++LQ AK Q Q V ++ Q E+ Q+ E R + +A
Sbjct: 168 DVESLRKTVQDLLAKLQEAKRQHQSDCVAFEVTLSRYQREAEQSNVALQREEDRVEQKEA 227
Query: 156 FLSKFQ-----LTSDEMSLLRGTREGPI 178
+ + Q + ++ +LL REG +
Sbjct: 228 EVGELQRRLLGMETEHQALLAKVREGEV 255
>gi|38045898 RAB6-interacting protein 2 isoform epsilon [Homo
sapiens]
Length = 1116
Score = 35.8 bits (81), Expect = 0.13
Identities = 37/222 (16%), Positives = 96/222 (43%), Gaps = 27/222 (12%)
Query: 48 DNDKEMLEALKALSTFF------VENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKE-- 99
+ + + +E ++ S F ++ L ++ ++++K+ + E + +E+
Sbjct: 420 EEEMKQMEVYRSHSKFMKNKVEQLKEELSSKEAQWEELKKKAAGLQAEIGQVKQELSRKD 479
Query: 100 -ELESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLS 158
EL ++ ++ ++N D ++ KE + LQ+E L +R + + L+
Sbjct: 480 TELLALQTKLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLN 539
Query: 159 KFQLTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQMALL 218
K +M+ +GT+ G I +D+K +L ++ + + +++ L
Sbjct: 540 KKTKQIQDMAEEKGTQAGEI---------------HDLKDMLDVKERKVNV-LQKKIENL 583
Query: 219 QETAYERLYRWA--QSECRTLTQESCDVSPVLTQAMEALQDR 258
QE ++ + + + ++L ++ + LT EAL ++
Sbjct: 584 QEQLRDKEKQMSSLKERVKSLQADTTNTDTALTTLEEALAEK 625
Score = 30.4 bits (67), Expect = 5.4
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 27/178 (15%)
Query: 33 NPLSRKLHKILETRLDNDKEMLEALKALSTFFVENS--LRTRRNLRGDIERKSLAINEEF 90
N S++L L + D +E+ EAL+ E L + R + E++ EE
Sbjct: 822 NDSSQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQV----EEL 877
Query: 91 VSIFKEVKEELESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQK--LEI 148
+ ++VK+ELES M ++L + ++ + T L++E +K E+
Sbjct: 878 LMAMEKVKQELES--------------MKAKLSSTQQSLAEKETHLTNLRAERRKHLEEV 923
Query: 149 RAQVADAFLSKFQLTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLRTNQQT 206
+A L+ ++LL + T++ AL R K +++ + QQT
Sbjct: 924 LEMKQEALLAAISEKDANIALLELSSSKKKTQEEVAALKREKD-----RLVQQLKQQT 976
>gi|36031016 CTCL tumor antigen L14-2 [Homo sapiens]
Length = 898
Score = 35.8 bits (81), Expect = 0.13
Identities = 17/77 (22%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 98 KEELESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIV-------KTTKLQSESQKLEIRA 150
K+E+E++ E+V+++++ D+ ++ ++++ +L++ K +LQSES L+ +
Sbjct: 554 KQEIENLKEEVESLNSLINDLQKDIEGSRKRESELLLFTERLTSKNAQLQSESNSLQSQF 613
Query: 151 QVADAFLSKFQLTSDEM 167
S+ Q ++M
Sbjct: 614 DKVSCSESQLQSQCEQM 630
>gi|31563507 GRIP and coiled-coil domain-containing 2 [Homo sapiens]
Length = 1684
Score = 35.4 bits (80), Expect = 0.17
Identities = 48/217 (22%), Positives = 100/217 (46%), Gaps = 26/217 (11%)
Query: 32 CNPLSRKLHKILETRLDNDKEMLEALKALSTFFVE-NSLRTRRNLRGDIERKSLAINEEF 90
C K++KI + KE+ + K T E SLR+ ++ R + E +
Sbjct: 960 CKEKEEKINKIKLVAVKAKKELDSSRKETQTVKEELESLRSEKDQLSASMRDLIQGAESY 1019
Query: 91 VSIFKEVKEELESISEDVQAMSNC---CQDMTSRLQAAKEQ-------TQDLIVKTTKLQ 140
++ E +++ E + + + +N +D+T +L+ + Q +DL+ + LQ
Sbjct: 1020 KNLLLEYEKQSEQLDVEKERANNFEHRIEDLTRQLRNSTLQCETINSDNEDLLARIETLQ 1079
Query: 141 SESQKLEIR---AQVADAFLSKFQLTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVK 197
S ++ LE++ Q A A + K +L ++++ + +E T + + L Q+ + K
Sbjct: 1080 SNAKLLEVQILEVQRAKAMVDK-ELEAEKLQKEQKIKEHATTVNELEEL--QVQLQKEKK 1136
Query: 198 VLLRTNQQTAGLEIMEQMAL------LQETAYERLYR 228
L +T Q+ LE++++ A ++ YERL +
Sbjct: 1137 QLQKTMQE---LELVKKDAQQTTLMNMEIADYERLMK 1170
Score = 30.4 bits (67), Expect = 5.4
Identities = 45/202 (22%), Positives = 85/202 (42%), Gaps = 21/202 (10%)
Query: 50 DKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEELESISEDVQ 109
DKE LEA K E ++ ++E + + +E + K + +ELE + +D Q
Sbjct: 1100 DKE-LEAEKLQK----EQKIKEHATTVNELEELQVQLQKEKKQLQKTM-QELELVKKDAQ 1153
Query: 110 AMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLSKFQLTSDEMSL 169
+ ++ + KE Q L K K++ Q+++I+ Q + + ++TS + S+
Sbjct: 1154 QTTLMNMEIADYERLMKELNQKLTNKNNKIEDLEQEIKIQKQKQETL--QEEITSLQSSV 1211
Query: 170 L----RGTREGPITEDFFKALGRVKQIHNDVKVL-------LRTNQQTAGLEIMEQMALL 218
+ T+ + K L KQ D +L L +QQ + ++ +
Sbjct: 1212 QQYEEKNTKIKQLLVKTKKELADSKQAETDHLILQASLKGELEASQQQVEVYKIQLAEIT 1271
Query: 219 QE--TAYERLYRWAQSECRTLT 238
E +E L A+ RTL+
Sbjct: 1272 SEKHKIHEHLKTSAEQHQRTLS 1293
>gi|134304846 Rb1-inducible coiled coil protein 1 isoform 2 [Homo
sapiens]
Length = 1591
Score = 35.0 bits (79), Expect = 0.22
Identities = 49/227 (21%), Positives = 91/227 (40%), Gaps = 32/227 (14%)
Query: 37 RKLHKILETRLDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKE 96
+KLH + +L + L++L+ +E++L+ R +EF + +
Sbjct: 963 KKLHVENDEKLQLLRAELQSLEQSHLKELEDTLQVRHI-------------QEFEKVMTD 1009
Query: 97 VKEELESISEDVQAMSNCCQDMTSRLQAAKE-QTQDLIVKTTKLQSESQKLEIRAQVADA 155
+ LE + ++ Q + N Q+ + + KE Q Q+L +K + L KLE+ + +A
Sbjct: 1010 HRVSLEELKKENQQIINQIQESHAEIIQEKEKQLQELKLKVSDLSDTRCKLEVELALKEA 1069
Query: 156 FLSKFQLTSDE---------MSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLRTNQQT 206
+ ++ +E SLL E TE L + Q +N+ N Q
Sbjct: 1070 ETDEIKILLEESRAQQKETLKSLLEQETENLRTE--ISKLNQKIQDNNE-------NYQV 1120
Query: 207 AGLEIMEQMALLQETAYERLYRWAQSECRTLTQESCDVSPVLTQAME 253
E+ M + ++ L + E L E V+ + QA E
Sbjct: 1121 GLAELRTLMTIEKDQCISELISRHEEESNILKAELNKVTSLHNQAFE 1167
>gi|134304842 Rb1-inducible coiled coil protein 1 isoform 1 [Homo
sapiens]
Length = 1594
Score = 35.0 bits (79), Expect = 0.22
Identities = 49/227 (21%), Positives = 91/227 (40%), Gaps = 32/227 (14%)
Query: 37 RKLHKILETRLDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKE 96
+KLH + +L + L++L+ +E++L+ R +EF + +
Sbjct: 963 KKLHVENDEKLQLLRAELQSLEQSHLKELEDTLQVRHI-------------QEFEKVMTD 1009
Query: 97 VKEELESISEDVQAMSNCCQDMTSRLQAAKE-QTQDLIVKTTKLQSESQKLEIRAQVADA 155
+ LE + ++ Q + N Q+ + + KE Q Q+L +K + L KLE+ + +A
Sbjct: 1010 HRVSLEELKKENQQIINQIQESHAEIIQEKEKQLQELKLKVSDLSDTRCKLEVELALKEA 1069
Query: 156 FLSKFQLTSDE---------MSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLRTNQQT 206
+ ++ +E SLL E TE L + Q +N+ N Q
Sbjct: 1070 ETDEIKILLEESRAQQKETLKSLLEQETENLRTE--ISKLNQKIQDNNE-------NYQV 1120
Query: 207 AGLEIMEQMALLQETAYERLYRWAQSECRTLTQESCDVSPVLTQAME 253
E+ M + ++ L + E L E V+ + QA E
Sbjct: 1121 GLAELRTLMTIEKDQCISELISRHEEESNILKAELNKVTSLHNQAFE 1167
>gi|38045896 RAB6-interacting protein 2 isoform delta [Homo sapiens]
Length = 1088
Score = 35.0 bits (79), Expect = 0.22
Identities = 40/214 (18%), Positives = 92/214 (42%), Gaps = 19/214 (8%)
Query: 47 LDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEELESISE 106
L+ + +ML++ ALST E ++ R + I + + ++ EL ++
Sbjct: 401 LEEEIQMLKSNGALSTEEREEEMKQMEVYRSHSKFMKNKIGQVKQELSRK-DTELLALQT 459
Query: 107 DVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLSKFQLTSDE 166
++ ++N D ++ KE + LQ+E L +R + + L+K +
Sbjct: 460 KLETLTNQFSDSKQHIEVLKESLTAKEQRAAILQTEVDALRLRLEEKETMLNKKTKQIQD 519
Query: 167 MSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQMALLQETAYERL 226
M+ +GT+ G I +D+K +L ++ + + +++ LQE ++
Sbjct: 520 MAEEKGTQAGEI---------------HDLKDMLDVKERKVNV-LQKKIENLQEQLRDKE 563
Query: 227 YRWA--QSECRTLTQESCDVSPVLTQAMEALQDR 258
+ + + ++L ++ + LT EAL ++
Sbjct: 564 KQMSSLKERVKSLQADTTNTDTALTTLEEALAEK 597
Score = 30.4 bits (67), Expect = 5.4
Identities = 40/178 (22%), Positives = 75/178 (42%), Gaps = 27/178 (15%)
Query: 33 NPLSRKLHKILETRLDNDKEMLEALKALSTFFVENS--LRTRRNLRGDIERKSLAINEEF 90
N S++L L + D +E+ EAL+ E L + R + E++ EE
Sbjct: 794 NDSSQQLQDSLRKKDDRIEELEEALRESVQITAEREMVLAQEESARTNAEKQV----EEL 849
Query: 91 VSIFKEVKEELESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQK--LEI 148
+ ++VK+ELES M ++L + ++ + T L++E +K E+
Sbjct: 850 LMAMEKVKQELES--------------MKAKLSSTQQSLAEKETHLTNLRAERRKHLEEV 895
Query: 149 RAQVADAFLSKFQLTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLRTNQQT 206
+A L+ ++LL + T++ AL R K +++ + QQT
Sbjct: 896 LEMKQEALLAAISEKDANIALLELSSSKKKTQEEVAALKREKD-----RLVQQLKQQT 948
>gi|237858621 polyamine modulated factor 1 binding protein 1 isoform
b [Homo sapiens]
Length = 882
Score = 35.0 bits (79), Expect = 0.22
Identities = 59/261 (22%), Positives = 104/261 (39%), Gaps = 46/261 (17%)
Query: 52 EMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEELE---SISEDV 108
E+ EAL+ L ENS + +R L+ + + + +N+ I + +E+ + ED+
Sbjct: 410 ELSEALRKL-----ENSDKEKRQLQKTVAEQDMKMNDMLDRIKHQHREQGSIKCKLEEDL 464
Query: 109 QAMSNCCQDMTSRLQAAKEQ-----------TQDLIVKTTKLQSESQKLEIRAQVADAFL 157
Q + +D +L+ +KE Q+ K L+ S+KLE + A L
Sbjct: 465 QEATKLLEDKREQLKKSKEHEKLMEGELEALRQEFKKKDKTLKENSRKLEEENENLRAEL 524
Query: 158 SKFQLTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQMAL 217
T E SL + + +D K + K+ L + Q + ++
Sbjct: 525 QCCS-TQLESSLNKYNTSQQVIQDLNKEIALQKE-------SLMSLQAQLDKALQKEKHY 576
Query: 218 LQET----AYERLYR----------WAQSECRTLTQESCDVSPVLTQAME---ALQDRPV 260
LQ T AY+ L R A + +T E+ + LTQ E L++ +
Sbjct: 577 LQTTITKEAYDALSRKSAACQDDLTQALEKLNHVTSETKSLQQSLTQTQEKKAQLEEEII 636
Query: 261 LYKYTLDEFGTARRSTVVRGF 281
Y+ + + T R +RGF
Sbjct: 637 AYEERMKKLNTELRK--LRGF 655
Score = 34.3 bits (77), Expect = 0.37
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 27/204 (13%)
Query: 41 KILETRLDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEE 100
K+LE + + K+ E K + E L LR + ++K + E ++++EE
Sbjct: 469 KLLEDKREQLKKSKEHEKLM-----EGELEA---LRQEFKKKDKTLKENS----RKLEEE 516
Query: 101 LESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLS-- 158
E++ ++Q S + ++ +++ QDL K LQ ES + ++AQ+ A
Sbjct: 517 NENLRAELQCCSTQLESSLNKYNTSQQVIQDL-NKEIALQKES-LMSLQAQLDKALQKEK 574
Query: 159 ---KFQLTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQM 215
+ +T + L + +D +AL ++ + ++ K L ++ QT E+
Sbjct: 575 HYLQTTITKEAYDAL-SRKSAACQDDLTQALEKLNHVTSETKSLQQSLTQT-----QEKK 628
Query: 216 ALLQE--TAYERLYRWAQSECRTL 237
A L+E AYE + +E R L
Sbjct: 629 AQLEEEIIAYEERMKKLNTELRKL 652
Score = 31.2 bits (69), Expect = 3.2
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 20/108 (18%)
Query: 88 EEFVSIFKEVKEELESISEDVQAMSNCCQDMTSRLQAAKEQT--------QDLIVKTTKL 139
EE+ ++ K+++ ELE++SE + + + L +E+T +D+ + +L
Sbjct: 178 EEYQNLVKDLRVELEAVSEQKRNIMKDMMKLELDLHGLREETSAHIERKDKDITILQCRL 237
Query: 140 Q------SESQKLEIR----AQVADAFLSKFQ--LTSDEMSLLRGTRE 175
Q +E+QKL ++ Q D L + + LT + SLL+ +E
Sbjct: 238 QELQLEFTETQKLTLKKDKFLQEKDEMLQELEKKLTQVQNSLLKKEKE 285
>gi|237858619 polyamine modulated factor 1 binding protein 1 isoform
a [Homo sapiens]
Length = 1007
Score = 35.0 bits (79), Expect = 0.22
Identities = 59/261 (22%), Positives = 104/261 (39%), Gaps = 46/261 (17%)
Query: 52 EMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEELE---SISEDV 108
E+ EAL+ L ENS + +R L+ + + + +N+ I + +E+ + ED+
Sbjct: 555 ELSEALRKL-----ENSDKEKRQLQKTVAEQDMKMNDMLDRIKHQHREQGSIKCKLEEDL 609
Query: 109 QAMSNCCQDMTSRLQAAKEQ-----------TQDLIVKTTKLQSESQKLEIRAQVADAFL 157
Q + +D +L+ +KE Q+ K L+ S+KLE + A L
Sbjct: 610 QEATKLLEDKREQLKKSKEHEKLMEGELEALRQEFKKKDKTLKENSRKLEEENENLRAEL 669
Query: 158 SKFQLTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQMAL 217
T E SL + + +D K + K+ L + Q + ++
Sbjct: 670 QCCS-TQLESSLNKYNTSQQVIQDLNKEIALQKE-------SLMSLQAQLDKALQKEKHY 721
Query: 218 LQET----AYERLYR----------WAQSECRTLTQESCDVSPVLTQAME---ALQDRPV 260
LQ T AY+ L R A + +T E+ + LTQ E L++ +
Sbjct: 722 LQTTITKEAYDALSRKSAACQDDLTQALEKLNHVTSETKSLQQSLTQTQEKKAQLEEEII 781
Query: 261 LYKYTLDEFGTARRSTVVRGF 281
Y+ + + T R +RGF
Sbjct: 782 AYEERMKKLNTELRK--LRGF 800
Score = 34.3 bits (77), Expect = 0.37
Identities = 47/204 (23%), Positives = 91/204 (44%), Gaps = 27/204 (13%)
Query: 41 KILETRLDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEE 100
K+LE + + K+ E K + E L LR + ++K + E ++++EE
Sbjct: 614 KLLEDKREQLKKSKEHEKLM-----EGELEA---LRQEFKKKDKTLKENS----RKLEEE 661
Query: 101 LESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLS-- 158
E++ ++Q S + ++ +++ QDL K LQ ES + ++AQ+ A
Sbjct: 662 NENLRAELQCCSTQLESSLNKYNTSQQVIQDL-NKEIALQKES-LMSLQAQLDKALQKEK 719
Query: 159 ---KFQLTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVKVLLRTNQQTAGLEIMEQM 215
+ +T + L + +D +AL ++ + ++ K L ++ QT E+
Sbjct: 720 HYLQTTITKEAYDAL-SRKSAACQDDLTQALEKLNHVTSETKSLQQSLTQT-----QEKK 773
Query: 216 ALLQE--TAYERLYRWAQSECRTL 237
A L+E AYE + +E R L
Sbjct: 774 AQLEEEIIAYEERMKKLNTELRKL 797
Score = 31.2 bits (69), Expect = 3.2
Identities = 27/108 (25%), Positives = 53/108 (49%), Gaps = 20/108 (18%)
Query: 88 EEFVSIFKEVKEELESISEDVQAMSNCCQDMTSRLQAAKEQT--------QDLIVKTTKL 139
EE+ ++ K+++ ELE++SE + + + L +E+T +D+ + +L
Sbjct: 323 EEYQNLVKDLRVELEAVSEQKRNIMKDMMKLELDLHGLREETSAHIERKDKDITILQCRL 382
Query: 140 Q------SESQKLEIR----AQVADAFLSKFQ--LTSDEMSLLRGTRE 175
Q +E+QKL ++ Q D L + + LT + SLL+ +E
Sbjct: 383 QELQLEFTETQKLTLKKDKFLQEKDEMLQELEKKLTQVQNSLLKKEKE 430
>gi|14249254 EF-hand calcium binding domain 4B isoform c [Homo
sapiens]
Length = 395
Score = 35.0 bits (79), Expect = 0.22
Identities = 21/102 (20%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 72 RRNLRGDIERKSLAINEEFVSIFKEVKEELESISE-----DVQAMSNCCQDMTSRLQAAK 126
+ L ++RK A +EE +++E++++++S E D + Q++ +L +
Sbjct: 215 KNELECALKRKIAAYDEEIQHLYEEMEQQIKSEKEQFLLKDTERFQARSQELEQKLLCKE 274
Query: 127 EQTQDLIVKTTKLQSESQKLEIRAQVADAFLSKFQLTSDEMS 168
++ + L K +L+ + L A +K +LT+ E++
Sbjct: 275 QELEQLTQKQKRLEGQCTALHHDKHETKAENTKLKLTNQELA 316
>gi|222418793 EF-hand calcium binding domain 4B isoform b [Homo
sapiens]
Length = 462
Score = 35.0 bits (79), Expect = 0.22
Identities = 21/102 (20%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 72 RRNLRGDIERKSLAINEEFVSIFKEVKEELESISE-----DVQAMSNCCQDMTSRLQAAK 126
+ L ++RK A +EE +++E++++++S E D + Q++ +L +
Sbjct: 215 KNELECALKRKIAAYDEEIQHLYEEMEQQIKSEKEQFLLKDTERFQARSQELEQKLLCKE 274
Query: 127 EQTQDLIVKTTKLQSESQKLEIRAQVADAFLSKFQLTSDEMS 168
++ + L K +L+ + L A +K +LT+ E++
Sbjct: 275 QELEQLTQKQKRLEGQCTALHHDKHETKAENTKLKLTNQELA 316
>gi|222418791 EF-hand calcium binding domain 4B isoform a [Homo
sapiens]
Length = 731
Score = 35.0 bits (79), Expect = 0.22
Identities = 21/102 (20%), Positives = 50/102 (49%), Gaps = 5/102 (4%)
Query: 72 RRNLRGDIERKSLAINEEFVSIFKEVKEELESISE-----DVQAMSNCCQDMTSRLQAAK 126
+ L ++RK A +EE +++E++++++S E D + Q++ +L +
Sbjct: 215 KNELECALKRKIAAYDEEIQHLYEEMEQQIKSEKEQFLLKDTERFQARSQELEQKLLCKE 274
Query: 127 EQTQDLIVKTTKLQSESQKLEIRAQVADAFLSKFQLTSDEMS 168
++ + L K +L+ + L A +K +LT+ E++
Sbjct: 275 QELEQLTQKQKRLEGQCTALHHDKHETKAENTKLKLTNQELA 316
>gi|19924131 RAD50 homolog isoform 2 [Homo sapiens]
Length = 1173
Score = 34.7 bits (78), Expect = 0.29
Identities = 29/157 (18%), Positives = 62/157 (39%)
Query: 41 KILETRLDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEE 100
K +E ++ L+ + T N + + + D + +N + + +E +
Sbjct: 664 KDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQH 723
Query: 101 LESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLSKF 160
L+S + ++++ R Q +EQT +L + L E + + + + L KF
Sbjct: 724 LKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYREIKDAKEQVSPLETTLEKF 783
Query: 161 QLTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVK 197
Q +E+ + T + +VK IH +K
Sbjct: 784 QQEKEELINKKNTSNKIAQDKLNDIKEKVKNIHGYMK 820
>gi|19924129 RAD50 homolog isoform 1 [Homo sapiens]
Length = 1312
Score = 34.7 bits (78), Expect = 0.29
Identities = 29/157 (18%), Positives = 62/157 (39%)
Query: 41 KILETRLDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINEEFVSIFKEVKEE 100
K +E ++ L+ + T N + + + D + +N + + +E +
Sbjct: 803 KDVERKIAQQAAKLQGIDLDRTVQQVNQEKQEKQHKLDTVSSKIELNRKLIQDQQEQIQH 862
Query: 101 LESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQVADAFLSKF 160
L+S + ++++ R Q +EQT +L + L E + + + + L KF
Sbjct: 863 LKSTTNELKSEKLQISTNLQRRQQLEEQTVELSTEVQSLYREIKDAKEQVSPLETTLEKF 922
Query: 161 QLTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVK 197
Q +E+ + T + +VK IH +K
Sbjct: 923 QQEKEELINKKNTSNKIAQDKLNDIKEKVKNIHGYMK 959
>gi|90819229 cutaneous T-cell lymphoma-associated antigen 1 isoform
1 [Homo sapiens]
Length = 745
Score = 34.7 bits (78), Expect = 0.29
Identities = 38/166 (22%), Positives = 72/166 (43%), Gaps = 13/166 (7%)
Query: 41 KILE--TRLDNDKEMLEALKALSTFFVENSLRTRRNLRGDIERKSLAINE---EFVSIFK 95
K+LE + + + E E +L E ++L E+ + +E E + + K
Sbjct: 61 KLLEKFSLVQKEYEGYEVESSLKNASFEKEATEAQSLEATCEKLNRFNSELVHEILCLEK 120
Query: 96 EVKEELESISEDVQAM---SNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQV 152
E+KEE SE + M S Q + ++ K Q + + + Q+ ++LEI ++
Sbjct: 121 ELKEEKSKHSEQNELMADISKRIQSLEDESKSLKSQVAEAKMTFKRFQANEERLEI--EI 178
Query: 153 ADAFLSKFQLTSDEMSLLRGTREGPITEDFFKALGRVKQIHNDVKV 198
DA+ +L + LL +E + ++ L + K+ D KV
Sbjct: 179 QDAWKENSELQESQKQLL---QEAEVWKEQVSELIKQKRTFEDSKV 221
>gi|239747109 PREDICTED: hypothetical protein XP_002344496 [Homo
sapiens]
Length = 146
Score = 34.7 bits (78), Expect = 0.29
Identities = 24/121 (19%), Positives = 64/121 (52%), Gaps = 9/121 (7%)
Query: 93 IFKEVKEELESISEDVQAMSNCCQDMTSRLQAAKEQTQDLIVKTTKLQSESQKLEIRAQV 152
+ K++K++ + + + +A+S+ C +++ Q +++ ++ K+Q E +KLE ++
Sbjct: 30 LIKKLKQKFDDLMAEEEAVSSKCVNLSKDNQVIQQE----LLSMKKVQQECEKLEENQKM 85
Query: 153 ADAFLSKFQLTSDEMSLLRGTR----EGPITEDFFKALGRVKQIHNDVKVLLRTNQQTAG 208
+ + + T E S++ ++ + + E +A+ ++K+IH V L ++N G
Sbjct: 86 LEEEILNLK-THMENSMVELSKLQEYKSELDERAMQAVEKLKEIHLQVTCLNQSNDSHYG 144
Query: 209 L 209
+
Sbjct: 145 V 145
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.131 0.362
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 21,744,210
Number of Sequences: 37866
Number of extensions: 884066
Number of successful extensions: 3636
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 32
Number of HSP's successfully gapped in prelim test: 159
Number of HSP's that attempted gapping in prelim test: 3324
Number of HSP's gapped (non-prelim): 476
length of query: 657
length of database: 18,247,518
effective HSP length: 109
effective length of query: 548
effective length of database: 14,120,124
effective search space: 7737827952
effective search space used: 7737827952
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.