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Search of human proteins with 33356547
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|33356547 minichromosome maintenance complex component 2
[Homo sapiens]
(904 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|33356547 minichromosome maintenance complex component 2 [Homo... 1793 0.0
gi|33469919 minichromosome maintenance complex component 4 [Homo... 342 7e-94
gi|33469917 minichromosome maintenance complex component 4 [Homo... 342 7e-94
gi|23510448 minichromosome maintenance complex component 5 [Homo... 323 4e-88
gi|7427519 minichromosome maintenance complex component 6 [Homo ... 322 1e-87
gi|33469968 minichromosome maintenance complex component 7 isofo... 317 2e-86
gi|6631095 minichromosome maintenance complex component 3 [Homo ... 316 5e-86
gi|19923727 minichromosome maintenance complex component 8 isofo... 307 3e-83
gi|33469922 minichromosome maintenance complex component 7 isofo... 303 6e-82
gi|33469924 minichromosome maintenance complex component 8 isofo... 301 1e-81
gi|23397546 minichromosome maintenance complex component 9 [Homo... 145 2e-34
gi|4505101 microtubule-associated protein 7 [Homo sapiens] 45 4e-04
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 43 0.001
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 43 0.002
gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithora... 40 0.008
gi|17975763 myelin transcription factor 1 [Homo sapiens] 40 0.008
gi|16262452 cingulin [Homo sapiens] 40 0.013
gi|155030232 proline, glutamic acid and leucine rich protein 1 [... 39 0.017
gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens] 39 0.017
gi|148746195 trichohyalin [Homo sapiens] 39 0.022
gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens] 39 0.022
gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens] 39 0.022
gi|13540523 nucleosomal binding protein 1 [Homo sapiens] 39 0.029
gi|239757964 PREDICTED: hypothetical protein [Homo sapiens] 39 0.029
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 39 0.029
gi|149999615 variable charge, X-linked 3B [Homo sapiens] 39 0.029
gi|7662238 apoptotic chromatin condensation inducer 1 [Homo sapi... 38 0.037
gi|17136078 VGF nerve growth factor inducible precursor [Homo sa... 38 0.037
gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens] 38 0.037
gi|6005757 chromatin-specific transcription elongation factor la... 38 0.049
>gi|33356547 minichromosome maintenance complex component 2 [Homo
sapiens]
Length = 904
Score = 1793 bits (4643), Expect = 0.0
Identities = 904/904 (100%), Positives = 904/904 (100%)
Query: 1 MAESSESFTMASSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESEGLLGTE 60
MAESSESFTMASSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESEGLLGTE
Sbjct: 1 MAESSESFTMASSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESEGLLGTE 60
Query: 61 GPLEEEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQR 120
GPLEEEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQR
Sbjct: 61 GPLEEEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQR 120
Query: 121 DREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEEMIESIENLEDLKGH 180
DREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEEMIESIENLEDLKGH
Sbjct: 121 DREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEEMIESIENLEDLKGH 180
Query: 181 SVREWVSMAGPRLEIHHRFKNFLRTHVDSHGHNVFKERISDMCKENRESLVVNYEDLAAR 240
SVREWVSMAGPRLEIHHRFKNFLRTHVDSHGHNVFKERISDMCKENRESLVVNYEDLAAR
Sbjct: 181 SVREWVSMAGPRLEIHHRFKNFLRTHVDSHGHNVFKERISDMCKENRESLVVNYEDLAAR 240
Query: 241 EHVLAYFLPEAPAELLQIFDEAALEVVLAMYPKYDRITNHIHVRISHLPLVEELRSLRQL 300
EHVLAYFLPEAPAELLQIFDEAALEVVLAMYPKYDRITNHIHVRISHLPLVEELRSLRQL
Sbjct: 241 EHVLAYFLPEAPAELLQIFDEAALEVVLAMYPKYDRITNHIHVRISHLPLVEELRSLRQL 300
Query: 301 HLNQLIRTSGVVTSCTGVLPQLSMVKYNCNKCNFVLGPFCQSQNQEVKPGSCPECQSAGP 360
HLNQLIRTSGVVTSCTGVLPQLSMVKYNCNKCNFVLGPFCQSQNQEVKPGSCPECQSAGP
Sbjct: 301 HLNQLIRTSGVVTSCTGVLPQLSMVKYNCNKCNFVLGPFCQSQNQEVKPGSCPECQSAGP 360
Query: 361 FEVNMEETIYQNYQRIRIQESPGKVAAGRLPRSKDAILLADLVDSCKPGDEIELTGIYHN 420
FEVNMEETIYQNYQRIRIQESPGKVAAGRLPRSKDAILLADLVDSCKPGDEIELTGIYHN
Sbjct: 361 FEVNMEETIYQNYQRIRIQESPGKVAAGRLPRSKDAILLADLVDSCKPGDEIELTGIYHN 420
Query: 421 NYDGSLNTANGFPVFATVILANHVAKKDNKVAVGELTDEDVKMITSLSKDQQIGEKIFAS 480
NYDGSLNTANGFPVFATVILANHVAKKDNKVAVGELTDEDVKMITSLSKDQQIGEKIFAS
Sbjct: 421 NYDGSLNTANGFPVFATVILANHVAKKDNKVAVGELTDEDVKMITSLSKDQQIGEKIFAS 480
Query: 481 IAPSIYGHEDIKRGLALALFGGEPKNPGGKHKVRGDINVLLCGDPGTAKSQFLKYIEKVS 540
IAPSIYGHEDIKRGLALALFGGEPKNPGGKHKVRGDINVLLCGDPGTAKSQFLKYIEKVS
Sbjct: 481 IAPSIYGHEDIKRGLALALFGGEPKNPGGKHKVRGDINVLLCGDPGTAKSQFLKYIEKVS 540
Query: 541 SRAIFTTGQGASAVGLTAYVQRHPVSREWTLEAGALVLADRGVCLIDEFDKMNDQDRTSI 600
SRAIFTTGQGASAVGLTAYVQRHPVSREWTLEAGALVLADRGVCLIDEFDKMNDQDRTSI
Sbjct: 541 SRAIFTTGQGASAVGLTAYVQRHPVSREWTLEAGALVLADRGVCLIDEFDKMNDQDRTSI 600
Query: 601 HEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSLTFSENVDLTEPIISRFDIL 660
HEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSLTFSENVDLTEPIISRFDIL
Sbjct: 601 HEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSLTFSENVDLTEPIISRFDIL 660
Query: 661 CVVRDTVDPVQDEMLARFVVGSHVRHHPSNKEEEGLANGSAAEPAMPNTYGVEPLPQEVL 720
CVVRDTVDPVQDEMLARFVVGSHVRHHPSNKEEEGLANGSAAEPAMPNTYGVEPLPQEVL
Sbjct: 661 CVVRDTVDPVQDEMLARFVVGSHVRHHPSNKEEEGLANGSAAEPAMPNTYGVEPLPQEVL 720
Query: 721 KKYIIYAKERVHPKLNQMDQDKVAKMYSDLRKESMATGSIPITVRHIESMIRMAEAHARI 780
KKYIIYAKERVHPKLNQMDQDKVAKMYSDLRKESMATGSIPITVRHIESMIRMAEAHARI
Sbjct: 721 KKYIIYAKERVHPKLNQMDQDKVAKMYSDLRKESMATGSIPITVRHIESMIRMAEAHARI 780
Query: 781 HLRDYVIEDDVNMAIRVMLESFIDTQKFSVMRSMRKTFARYLSFRRDNNELLLFILKQLV 840
HLRDYVIEDDVNMAIRVMLESFIDTQKFSVMRSMRKTFARYLSFRRDNNELLLFILKQLV
Sbjct: 781 HLRDYVIEDDVNMAIRVMLESFIDTQKFSVMRSMRKTFARYLSFRRDNNELLLFILKQLV 840
Query: 841 AEQVTYQRNRFGAQQDTIEVPEKDLVDKARQINIHNLSAFYDSELFRMNKFSHDLKRKMI 900
AEQVTYQRNRFGAQQDTIEVPEKDLVDKARQINIHNLSAFYDSELFRMNKFSHDLKRKMI
Sbjct: 841 AEQVTYQRNRFGAQQDTIEVPEKDLVDKARQINIHNLSAFYDSELFRMNKFSHDLKRKMI 900
Query: 901 LQQF 904
LQQF
Sbjct: 901 LQQF 904
>gi|33469919 minichromosome maintenance complex component 4 [Homo
sapiens]
Length = 863
Score = 342 bits (878), Expect = 7e-94
Identities = 256/826 (30%), Positives = 399/826 (48%), Gaps = 104/826 (12%)
Query: 2 AESSESFTMASSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESEGLLGTEG 61
A++ S SSP+QRRRG D S+ + +SPG DL +
Sbjct: 21 AQTPRSEDARSSPSQRRRGED------STSTGELQPMPTSPGVDL-------------QS 61
Query: 62 PLEEEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQRD 121
P ++ L + AIP LD + L + +RQR
Sbjct: 62 PAAQDV----LFSSPPQMHSSAIP-LDFDVSSPLTYGTPSSRVEGTPRSGVRGTPVRQRP 116
Query: 122 REAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEEMIESIENLEDLKGHS 181
LG ++GL D DG E+++ S ++L G
Sbjct: 117 -----DLGSAQKGLQVDLQS------------------DGAAAEDIVASEQSL----GQK 149
Query: 182 VREW---VSMAGPRLEIHHRFKNFLRTHVD---SHGHNV--------FKERISDMCKENR 227
+ W V++A + F+ FL+ +D NV + +R+ ++
Sbjct: 150 LVIWGTDVNVAACK----ENFQRFLQRFIDPLAKEEENVGIDITEPLYMQRLGEINVIGE 205
Query: 228 ESLVVNYEDLAAREHVLAYFLPEAPAELLQIFDEAALEVVLAMYPKYDRITNH-IHVRIS 286
L VN E + + + L L P E++ FD A E+ YP D I H I VR
Sbjct: 206 PFLNVNCEHIKSFDKNLYRQLISYPQEVIPTFDMAVNEIFFDRYP--DSILEHQIQVRPF 263
Query: 287 HLPLVEELRSLRQLHLNQLIRTSGVVTSCTGVLPQLSMVKYNCNKCNFVLGPFCQSQNQE 346
+ + +R+L ++QLI SG+V + ++P++ + C C + +
Sbjct: 264 NALKTKNMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCAHTTRVE-MDRGRI 322
Query: 347 VKPGSCPECQSAGPFEVNMEETIYQNYQRIRIQESPGKVAAGRLPRSKDAILLADLVDSC 406
+P C C + + +++ + Q I++QESP + AG+ P + DLVD
Sbjct: 323 AEPSVCGRCHTTHSMALIHNRSLFSDKQMIKLQESPEDMPAGQTPHTVILFAHNDLVDKV 382
Query: 407 KPGDEIELTGIYHN-NYDGSLNTANGFPVFATVILANHVAKKDNKVAVGE--------LT 457
+PGD + +TGIY + +N V+ T I H K D K G +
Sbjct: 383 QPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRKTDAKRLHGLDEEAEQKLFS 442
Query: 458 DEDVKMITSLSKDQQIGEKIFASIAPSIYGHEDIKRGLALALFGGEPKNPG--GKHKVRG 515
++ V+++ LS+ I E++ +++APSIY HEDIK+G+ L LFGG K+ G+ K R
Sbjct: 443 EKRVELLKELSRKPDIYERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRA 502
Query: 516 DINVLLCGDPGTAKSQFLKYIEKVSSRAIFTTGQGASAVGLTAYVQRHPVSREWTLEAGA 575
+IN+LLCGDPGT+KSQ L+Y+ + R +T+G+G+SAVGLTAYV + P +R+ L+ GA
Sbjct: 503 EINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGA 562
Query: 576 LVLADRGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGG 635
LVL+D G+C IDEFDKMN+ R+ +HE MEQQ++SI+KAGI+ L AR +V+AAANPI
Sbjct: 563 LVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIES 622
Query: 636 RYDPSLTFSENVDLTEPIISRFDILCVVRDTVDPVQDEMLARFVVGSHVRHHPSNKEEEG 695
+++P T EN+ L ++SRFD++ ++ D D D LA +V + + +E
Sbjct: 623 QWNPKKTTIENIQLPHTLLSRFDLIFLLLDPQDEAYDRRLAHHLVALYYQSEEQAEE--- 679
Query: 696 LANGSAAEPAMPNTYGVEPLPQEVLKKYIIYAKERVHPKLNQMDQDKVAKMYSDLRKESM 755
E L VLK YI YA + P+L++ + + Y D+RK
Sbjct: 680 -----------------ELLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVDMRKIGS 722
Query: 756 ATGSIPITVRHIESMIRMAEAHARIHLRDYVIEDDVNMAIRVMLES 801
+ G + R +ES+IR+AEAHA++ L + V DV A R+ E+
Sbjct: 723 SRGMVSAYPRQLESLIRLAEAHAKVRLSNKVEAIDVEEAKRLHREA 768
>gi|33469917 minichromosome maintenance complex component 4 [Homo
sapiens]
Length = 863
Score = 342 bits (878), Expect = 7e-94
Identities = 256/826 (30%), Positives = 399/826 (48%), Gaps = 104/826 (12%)
Query: 2 AESSESFTMASSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESEGLLGTEG 61
A++ S SSP+QRRRG D S+ + +SPG DL +
Sbjct: 21 AQTPRSEDARSSPSQRRRGED------STSTGELQPMPTSPGVDL-------------QS 61
Query: 62 PLEEEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQRD 121
P ++ L + AIP LD + L + +RQR
Sbjct: 62 PAAQDV----LFSSPPQMHSSAIP-LDFDVSSPLTYGTPSSRVEGTPRSGVRGTPVRQRP 116
Query: 122 REAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEEMIESIENLEDLKGHS 181
LG ++GL D DG E+++ S ++L G
Sbjct: 117 -----DLGSAQKGLQVDLQS------------------DGAAAEDIVASEQSL----GQK 149
Query: 182 VREW---VSMAGPRLEIHHRFKNFLRTHVD---SHGHNV--------FKERISDMCKENR 227
+ W V++A + F+ FL+ +D NV + +R+ ++
Sbjct: 150 LVIWGTDVNVAACK----ENFQRFLQRFIDPLAKEEENVGIDITEPLYMQRLGEINVIGE 205
Query: 228 ESLVVNYEDLAAREHVLAYFLPEAPAELLQIFDEAALEVVLAMYPKYDRITNH-IHVRIS 286
L VN E + + + L L P E++ FD A E+ YP D I H I VR
Sbjct: 206 PFLNVNCEHIKSFDKNLYRQLISYPQEVIPTFDMAVNEIFFDRYP--DSILEHQIQVRPF 263
Query: 287 HLPLVEELRSLRQLHLNQLIRTSGVVTSCTGVLPQLSMVKYNCNKCNFVLGPFCQSQNQE 346
+ + +R+L ++QLI SG+V + ++P++ + C C + +
Sbjct: 264 NALKTKNMRNLNPEDIDQLITISGMVIRTSQLIPEMQEAFFQCQVCAHTTRVE-MDRGRI 322
Query: 347 VKPGSCPECQSAGPFEVNMEETIYQNYQRIRIQESPGKVAAGRLPRSKDAILLADLVDSC 406
+P C C + + +++ + Q I++QESP + AG+ P + DLVD
Sbjct: 323 AEPSVCGRCHTTHSMALIHNRSLFSDKQMIKLQESPEDMPAGQTPHTVILFAHNDLVDKV 382
Query: 407 KPGDEIELTGIYHN-NYDGSLNTANGFPVFATVILANHVAKKDNKVAVGE--------LT 457
+PGD + +TGIY + +N V+ T I H K D K G +
Sbjct: 383 QPGDRVNVTGIYRAVPIRVNPRVSNVKSVYKTHIDVIHYRKTDAKRLHGLDEEAEQKLFS 442
Query: 458 DEDVKMITSLSKDQQIGEKIFASIAPSIYGHEDIKRGLALALFGGEPKNPG--GKHKVRG 515
++ V+++ LS+ I E++ +++APSIY HEDIK+G+ L LFGG K+ G+ K R
Sbjct: 443 EKRVELLKELSRKPDIYERLASALAPSIYEHEDIKKGILLQLFGGTRKDFSHTGRGKFRA 502
Query: 516 DINVLLCGDPGTAKSQFLKYIEKVSSRAIFTTGQGASAVGLTAYVQRHPVSREWTLEAGA 575
+IN+LLCGDPGT+KSQ L+Y+ + R +T+G+G+SAVGLTAYV + P +R+ L+ GA
Sbjct: 503 EINILLCGDPGTSKSQLLQYVYNLVPRGQYTSGKGSSAVGLTAYVMKDPETRQLVLQTGA 562
Query: 576 LVLADRGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGG 635
LVL+D G+C IDEFDKMN+ R+ +HE MEQQ++SI+KAGI+ L AR +V+AAANPI
Sbjct: 563 LVLSDNGICCIDEFDKMNESTRSVLHEVMEQQTLSIAKAGIICQLNARTSVLAAANPIES 622
Query: 636 RYDPSLTFSENVDLTEPIISRFDILCVVRDTVDPVQDEMLARFVVGSHVRHHPSNKEEEG 695
+++P T EN+ L ++SRFD++ ++ D D D LA +V + + +E
Sbjct: 623 QWNPKKTTIENIQLPHTLLSRFDLIFLLLDPQDEAYDRRLAHHLVALYYQSEEQAEE--- 679
Query: 696 LANGSAAEPAMPNTYGVEPLPQEVLKKYIIYAKERVHPKLNQMDQDKVAKMYSDLRKESM 755
E L VLK YI YA + P+L++ + + Y D+RK
Sbjct: 680 -----------------ELLDMAVLKDYIAYAHSTIMPRLSEEASQALIEAYVDMRKIGS 722
Query: 756 ATGSIPITVRHIESMIRMAEAHARIHLRDYVIEDDVNMAIRVMLES 801
+ G + R +ES+IR+AEAHA++ L + V DV A R+ E+
Sbjct: 723 SRGMVSAYPRQLESLIRLAEAHAKVRLSNKVEAIDVEEAKRLHREA 768
>gi|23510448 minichromosome maintenance complex component 5 [Homo
sapiens]
Length = 734
Score = 323 bits (828), Expect = 4e-88
Identities = 235/741 (31%), Positives = 373/741 (50%), Gaps = 74/741 (9%)
Query: 194 EIHHRFKNFLRTHVDSHGHNVFKERISDMCKENRES----LVVNYEDLAAREHVLAYFLP 249
++ RFK FLR + F + D K + + V EDLA+ + LA +L
Sbjct: 30 QLQRRFKEFLRQYRVGTDRTGFTFKYRDELKRHYNLGEYWIEVEMEDLASFDEDLADYLY 89
Query: 250 EAPAELLQIFDEAALEV---VLAMYPKYDRITNHIHVRISHLPLVEELRSLRQLHLNQLI 306
+ PAE LQ+ +EAA EV V P + + I V + +RSL+ ++ L+
Sbjct: 90 KQPAEHLQLLEEAAKEVADEVTRPRPSGEEVLQDIQVMLKSDASPSSIRSLKSDMMSHLV 149
Query: 307 RTSGVVTSCTGVLPQLSMVKYNCNKCNFVLGPFCQSQNQE--VKPGSC-------PECQS 357
+ G++ + + V + + + C C L E P C P+C
Sbjct: 150 KIPGIIIAASAVRAKATRISIQCRSCRNTLTNIAMRPGLEGYALPRKCNTDQAGRPKCP- 208
Query: 358 AGPFEVNMEETIYQNYQRIRIQESPGKVAAGRLPRSKDAILLADLVDSCKPGDEIELTGI 417
P+ + ++ ++Q +++QE P V G +PR L D PG+ + + GI
Sbjct: 209 LDPYFIMPDKCKCVDFQTLKLQELPDAVPHGEMPRHMQLYCDRYLCDKVVPGNRVTIMGI 268
Query: 418 YHNNYDGSLNTANGFPVFATVILANHV--------AKKDNKVAVGELTDEDVKMITSLSK 469
Y G L T+ G I ++++ + G ++ ++ + L+
Sbjct: 269 YSIKKFG-LTTSRGRDRVGVGIRSSYIRVLGIQVDTDGSGRSFAGAVSPQEEEEFRRLAA 327
Query: 470 DQQIGEKIFASIAPSIYGHEDIKRGLALALFGGEPKN-PGGKHKVRGDINVLLCGDPGTA 528
+ E I SIAPSI+G D+K+ +A LFGG K P G + RGDIN+L+ GDPGTA
Sbjct: 328 LPNVYEVISKSIAPSIFGGTDMKKAIACLLFGGSRKRLPDGLTR-RGDINLLMLGDPGTA 386
Query: 529 KSQFLKYIEKVSSRAIFTTGQGASAVGLTAYVQRHPVSREWTLEAGALVLADRGVCLIDE 588
KSQ LK++EK S ++T+G+G+SA GLTA V R P SR + +E GA+VLAD GV IDE
Sbjct: 387 KSQLLKFVEKCSPIGVYTSGKGSSAAGLTASVMRDPSSRNFIMEGGAMVLADGGVVCIDE 446
Query: 589 FDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSLTFSENVD 648
FDKM + DR +IHEAMEQQ+ISI+KAGI T+L +RC+V+AAAN + GR+D + +N+D
Sbjct: 447 FDKMREDDRVAIHEAMEQQTISIAKAGITTTLNSRCSVLAAANSVFGRWDET-KGEDNID 505
Query: 649 LTEPIISRFDILCVVRDTVDPVQDEMLARFVVGSHVRHHPSNKEEEGLANGSAAEPAMPN 708
I+SRFD++ +V+D + +D MLA+ V+ HV A+
Sbjct: 506 FMPTILSRFDMIFIVKDEHNEERDVMLAKHVITLHV-------------------SALTQ 546
Query: 709 TYGVE-PLPQEVLKKYIIYAKERVHPKLNQMDQDKVAKMYSDLR-------KESMATGSI 760
T VE + LKK+I Y + + P+L+ +K+ Y +R ++S SI
Sbjct: 547 TQAVEGEIDLAKLKKFIAYCRVKCGPRLSAEAAEKLKNRYIIMRSGARQHERDSDRRSSI 606
Query: 761 PITVRHIESMIRMAEAHARIHLRDYVIEDDVNMAIRVMLESFIDTQKFSVMRSMRKTFAR 820
PITVR +E+++R+AEA +++ L+ + E DV A+R+ S +D ++ T +
Sbjct: 607 PITVRQLEAIVRIAEALSKMKLQPFATEADVEEALRLFQVSTLDA-------ALSGTLSG 659
Query: 821 YLSF-RRDNNELLLFILKQLVAEQVTYQRNRFGAQQDTIEVPEKDLVDKARQINIHNLSA 879
F +++ E+L I KQL +R G+Q + + K + IH +
Sbjct: 660 VEGFTSQEDQEMLSRIEKQL------KRRFAIGSQVSEHSIIKDFTKQKYPEHAIHKVLQ 713
Query: 880 FYDSELFRMNKFSHDLKRKMI 900
+ R + H ++RK++
Sbjct: 714 L----MLRRGEIQHRMQRKVL 730
>gi|7427519 minichromosome maintenance complex component 6 [Homo
sapiens]
Length = 821
Score = 322 bits (824), Expect = 1e-87
Identities = 212/660 (32%), Positives = 343/660 (51%), Gaps = 87/660 (13%)
Query: 199 FKNFLRTHVDSHGHNVFKERISDMCKENRESLVVNYEDLAAREHVLAYFLPEA------- 251
F +FL S G + + ++ + R +LVV++ DL L+ + E
Sbjct: 30 FLDFLEEFQSSDGEIKYLQLAEELIRPERNTLVVSFVDLEQFNQQLSTTIQEEFYRVYPY 89
Query: 252 PAELLQIFDEAALEVVLAMYPKYDRITNHIHVRISHLPLVEELRSLRQLHLNQLIRTSGV 311
L+ F + E+ LA +V LP ++R L + L R SG
Sbjct: 90 LCRALKTFVKDRKEIPLA---------KDFYVAFQDLPTRHKIRELTSSRIGLLTRISGQ 140
Query: 312 VTSCTGVLPQLSMVKYNCNKCNFVLGPFCQSQNQEVKPGSC--PECQSAGPFEVNMEETI 369
V V P+L + C C V+ + Q + +P C P C + F ++ ++
Sbjct: 141 VVRTHPVHPELVSGTFLCLDCQTVIRDV-EQQFKYTQPNICRNPVCANRRRFLLDTNKSR 199
Query: 370 YQNYQRIRIQESPGKVAAGRLPRSKDAILLADLVDSCKPGDEIELTGIY----------- 418
+ ++Q++RIQE+ ++ G +PRS + IL A+ V+S + GD+ + TG
Sbjct: 200 FVDFQKVRIQETQAELPRGSIPRSLEVILRAEAVESAQAGDKCDFTGTLIVVPDVSKLST 259
Query: 419 ---HNNYDGSLNTANGFPV---------------FATVILANHVAKKDNKVAVGELTDED 460
+ ++ +G+ + V LA VA + + EL DE+
Sbjct: 260 PGARAETNSRVSGVDGYETEGIRGLRALGVRDLSYRLVFLACCVAPTNPRFGGKELRDEE 319
Query: 461 V--------------KMITSLSKDQQIGEKIFASIAPSIYGHEDIKRGLALALFGGEPKN 506
+ + +S+D+ + + S+ P+I+G++++KRG+ L LFGG PK
Sbjct: 320 QTAESIKNQMTVKEWEKVFEMSQDKNLYHNLCTSLFPTIHGNDEVKRGVLLMLFGGVPKT 379
Query: 507 PGGKHKVRGDINVLLCGDPGTAKSQFLKYIEKVSSRAIFTTGQGASAVGLTAYVQRHPVS 566
G +RGDINV + GDP TAKSQFLK++E+ S RA++T+G+ +SA GLTA V R S
Sbjct: 380 TGEGTSLRGDINVCIVGDPSTAKSQFLKHVEEFSPRAVYTSGKASSAAGLTAAVVRDEES 439
Query: 567 REWTLEAGALVLADRGVCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTV 626
E+ +EAGAL+LAD GVC IDEFDKM+ +D+ +IHEAMEQQ+ISI+KAG+ +L AR ++
Sbjct: 440 HEFVIEAGALMLADNGVCCIDEFDKMDVRDQVAIHEAMEQQTISITKAGVKATLNARTSI 499
Query: 627 IAAANPIGGRYDPSLTFSENVDLTEPIISRFDILCVVRDTVDPVQDEMLARFVVGSHVRH 686
+AAANPI G YD S + +N++L+ PI+SRFD+ ++ D + V D +AR +V H
Sbjct: 500 LAAANPISGHYDRSKSLKQNINLSAPIMSRFDLFFILVDECNEVTDYAIARRIVDLH--- 556
Query: 687 HPSNKEEEGLANGSAAEPAMPNTYGVEPLPQEVLKKYIIYAKERVHPKLNQMDQDKVAKM 746
S E ++ Y ++ +++Y+++A++ PK+++ +D + +
Sbjct: 557 -------------SRIEESIDRVYSLDD-----IRRYLLFARQ-FKPKISKESEDFIVEQ 597
Query: 747 YSDLRK---ESMATGSIPITVRHIESMIRMAEAHARIHLRDYVIEDDVNMAIRVMLESFI 803
Y LR+ + S ITVR +ESMIR++EA AR+H D V V A R++ +S I
Sbjct: 598 YKHLRQRDGSGVTKSSWRITVRQLESMIRLSEAMARMHCCDEVQPKHVKEAFRLLNKSII 657
>gi|33469968 minichromosome maintenance complex component 7 isoform
1 [Homo sapiens]
Length = 719
Score = 317 bits (813), Expect = 2e-86
Identities = 193/518 (37%), Positives = 299/518 (57%), Gaps = 42/518 (8%)
Query: 294 LRSLRQLHLNQLIRTSGVVTSCTGVLPQLSMVKYNCNKCNFVLGPFCQSQNQEVKPG-SC 352
+R +R + +L+ G+VT + V P++ + Y C++C + Q+ P C
Sbjct: 149 IREVRADSVGKLVTVRGIVTRVSEVKPKMVVATYTCDQCG--AETYQPIQSPTFMPLIMC 206
Query: 353 P--ECQ---SAGPFEVNMEETIYQNYQRIRIQESPGKVAAGRLPRSKDAILLADLVDSCK 407
P ECQ S G + + + +Q +++QE +V G +PRS ++ + +
Sbjct: 207 PSQECQTNRSGGRLYLQTRGSRFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIAQ 266
Query: 408 PGDEIELTGIYHNNYDGSLNTANGFPVFATVILANHVAK----KDNKVAVGELTDEDVKM 463
PGD + +TGI+ + T + A+ + K +D++ GELT E+++
Sbjct: 267 PGDHVSVTGIFLPILRTGFRQVVQGLLSETYLEAHRIVKMNKSEDDESGAGELTREELRQ 326
Query: 464 ITSLSKDQQIGEKIFASIAPSIYGHEDIKRGLALALFGGEPKNPGGKHKVRGDINVLLCG 523
I ++ EK+ ASIAP IYGHED+K+ L L L GG ++P G K+RG+IN+ L G
Sbjct: 327 IA----EEDFYEKLAASIAPEIYGHEDVKKALLLLLVGGVDQSPRGM-KIRGNINICLMG 381
Query: 524 DPGTAKSQFLKYIEKVSSRAIFTTGQGASAVGLTAYVQRHPVSREWTLEAGALVLADRGV 583
DPG AKSQ L YI++++ R+ +TTG+G+S VGLTA V R VS E TLE GALVLAD+GV
Sbjct: 382 DPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQGV 441
Query: 584 CLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSLTF 643
C IDEFDKM + DRT+IHE MEQQ+ISI+KAGI+T+L ARC+++AAANP GRY+P +
Sbjct: 442 CCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRSL 501
Query: 644 SENVDLTEPIISRFDILCVVRDTVDPVQDEMLARFV--VGSHVRHHPSNKEEEGLANGSA 701
+N+ L ++SRFD+L +++D D D LA+ + V H R PS
Sbjct: 502 EQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPSQ----------- 550
Query: 702 AEPAMPNTYGVEPLPQEVLKKYIIYAKERVHPKLNQMDQDKVAKMYSDLRKESMATGSIP 761
EPL +++++YI +E+ P + + D + Y ++R+E+ A+
Sbjct: 551 ----------FEPLDMKLMRRYIAMCREK-QPMVPESLADYITAAYVEMRREAWASKDAT 599
Query: 762 IT-VRHIESMIRMAEAHARIHLRDYVIEDDVNMAIRVM 798
T R + +++R++ A AR+ + D V ++DVN AIR+M
Sbjct: 600 YTSARTLLAILRLSTALARLRMVDVVEKEDVNEAIRLM 637
>gi|6631095 minichromosome maintenance complex component 3 [Homo
sapiens]
Length = 808
Score = 316 bits (810), Expect = 5e-86
Identities = 217/644 (33%), Positives = 339/644 (52%), Gaps = 42/644 (6%)
Query: 193 LEIHHRFKNFLRTHVDSHGHNVFKERISDMCKENRESLVVNYEDLAAREHVLAYFLPEAP 252
+E+ +++L D +++ ++ ++ +N+ L+VN DL + A L
Sbjct: 10 VELREAQRDYLDFLDDEEDQGIYQSKVRELISDNQYRLIVNVNDLRRKNEKRANRLLNNA 69
Query: 253 AELLQIFDEAALEVVLAMYPKYDRITNHIHVRISHLPLVEEL--RSLRQLHLNQLIRTSG 310
E L F A + V ++ Y + +V + + + R+L L+ ++ G
Sbjct: 70 FEELVAFQRALKDFVASIDATYAKQYEEFYVGLEGSFGSKHVSPRTLTSCFLSCVVCVEG 129
Query: 311 VVTSCTGVLPQLSMVKYNCNKCNFVLGPFCQSQNQEVK-PGSC---PECQSAGPFEVNME 366
+VT C+ V P++ + C + V P S + + P E
Sbjct: 130 IVTKCSLVRPKVVRSVHYCPATKKTIERRYSDLTTLVAFPSSSVYPTKDEENNPLETEYG 189
Query: 367 ETIYQNYQRIRIQESPGKVAAGRLPRSKDAILLADLVDSCKPGDEIELTGIYHNNYDGSL 426
++Y+++Q I IQE P K AG+LPRS D IL DLVD KPGD +++ G Y
Sbjct: 190 LSVYKDHQTITIQEMPEKAPAGQLPRSVDVILDDDLVDKAKPGDRVQVVGTYRCLPGKKG 249
Query: 427 NTANGFPVFATVILANHVAKKDNKVAVGELTDEDVKMITSLSK--DQQIGEKIFASIAPS 484
+G F TV++A +V K+ +K A + ED+ I SK + I +++ S+APS
Sbjct: 250 GYTSG--TFRTVLIACNV-KQMSKDAQPSFSAEDIAKIKKFSKTRSKDIFDQLAKSLAPS 306
Query: 485 IYGHEDIKRGLALALFGGEPKNPGGKHKVRGDINVLLCGDPGTAKSQFLKYIEKVSSRAI 544
I+GH+ +K+ + L GG ++ +RGDIN+LL GDP AKSQ L+Y+ + RAI
Sbjct: 307 IHGHDYVKKAILCLLLGGVERDLENGSHIRGDINILLIGDPSVAKSQLLRYVLCTAPRAI 366
Query: 545 FTTGQGASAVGLTAYVQRHPVSREWTLEAGALVLADRGVCLIDEFDKMNDQDRTSIHEAM 604
TTG+G+S VGLTA V + E LEAGA+VLADRGV IDEFDKM+D DRT+IHE M
Sbjct: 367 PTTGRGSSGVGLTAAVTTDQETGERRLEAGAMVLADRGVVCIDEFDKMSDMDRTAIHEVM 426
Query: 605 EQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSLTFSENVDLTEPIISRFDILCVVR 664
EQ ++I+KAGI L ARC+V+AAANP+ GRYD T EN+ L + ++SRFD+L ++
Sbjct: 427 EQGRVTIAKAGIHARLNARCSVLAAANPVYGRYDQYKTPMENIGLQDSLLSRFDLLFIML 486
Query: 665 DTVDPVQDEMLARFVVGSHVRHHPSNKEEEGLANGSAAEPAM---PN------------- 708
D +DP QD ++ V+ H P ++ + + GSA + PN
Sbjct: 487 DQMDPEQDREISDHVLRMHRYRAPGEQDGDAMPLGSAVDILATDDPNFSQEDQQDTQIYE 546
Query: 709 -----TYGVEPLPQEV-----LKKYIIYAKERVHPKLNQMDQDKVAKMYSDLR-KESMAT 757
+G + +++ +KKYI AK + P L Q +A+ YS LR ++SM++
Sbjct: 547 KHDNLLHGTKKKKEKMVSAAFMKKYIHVAK-IIKPVLTQESATYIAEEYSRLRSQDSMSS 605
Query: 758 GSI---PITVRHIESMIRMAEAHARIHLRDYVIEDDVNMAIRVM 798
+ P+T R +E++IR+A AHA+ + V D A+ ++
Sbjct: 606 DTARTSPVTARTLETLIRLATAHAKARMSKTVDLQDAEEAVELV 649
>gi|19923727 minichromosome maintenance complex component 8 isoform
1 [Homo sapiens]
Length = 840
Score = 307 bits (786), Expect = 3e-83
Identities = 227/757 (29%), Positives = 372/757 (49%), Gaps = 88/757 (11%)
Query: 125 GRGLGRMR---------RGLLYDSDEEDEERPARKRRQVERATEDGEE-------DEEMI 168
GRG GR R G E E RP + +R +E + + M
Sbjct: 7 GRGFGRGRFQSWKRGRGGGNFSGKWREREHRPDLSKTTGKRTSEQTPQFLLSTKTPQSMQ 66
Query: 169 ESIENLEDLKGHSV--REWVSMAGPRLEIHHRFKNFLRTHVDSHGHNVFKERISDMCKEN 226
+++ KG + E S + P +E F+ F H+D + K+ I E
Sbjct: 67 STLDRFIPYKGWKLYFSEVYSDSSPLIEKIQAFEKFFTRHIDLYD----KDEI-----ER 117
Query: 227 RESLVVNYEDLAAREHV------LAYFLPEAPAELLQIFDEAALEVVLAMYPKY------ 274
+ S++V++++L V +A L +AP + L A +V+ ++
Sbjct: 118 KGSILVDFKELTEGGEVTNLIPDIATELRDAPEKTLACMGLAIHQVLTKDLERHAAELQA 177
Query: 275 -DRITN---------HIHVRISHLPLVEELRSLRQLHLNQLIRTSGVVTSCTGVLPQLSM 324
+ ++N HIH R+ + + +L+++R + + I G V + + P +
Sbjct: 178 QEGLSNDGETMVNVPHIHARVYNYEPLTQLKNVRANYYGKYIALRGTVVRVSNIKPLCTK 237
Query: 325 VKYNCNKCNFVLGPFCQSQNQEVKPGSCPECQSAGPFEVNMEE---TIYQNYQRIRIQE- 380
+ + C C + F + P CP G + T+ ++Q I+IQE
Sbjct: 238 MAFLCAACGEIQS-FPLPDGKYSLPTKCPVPVCRGRSFTALRSSPLTVTMDWQSIKIQEL 296
Query: 381 -SPGKVAAGRLPRSKDAILLADLVDSCKPGDEIELTGIYH--NNYDGSLNTANGFPVFAT 437
S + AGR+PR+ + L+ DLVDSC PGD + +TGI N +GS N N +F
Sbjct: 297 MSDDQREAGRIPRTIECELVHDLVDSCVPGDTVTITGIVKVSNAEEGSRNK-NDKCMFLL 355
Query: 438 VILANHVAKKDNKVAVG-----------ELTDEDVKMITSLSKDQQIGEKIFASIAPSIY 486
I AN ++ + E + +D+ I + ++ + + I S+ P I+
Sbjct: 356 YIEANSISNSKGQKTKSSEDGCKHGMLMEFSLKDLYAIQEIQAEENLFKLIVNSLCPVIF 415
Query: 487 GHEDIKRGLALALFGGEPKNPGGKHKV--RGDINVLLCGDPGTAKSQFLKYIEKVSSRAI 544
GHE +K GLALALFGG K K+++ RGD ++L+ GDPG KSQ L+ V+ R +
Sbjct: 416 GHELVKAGLALALFGGSQKYADDKNRIPIRGDPHILVVGDPGLGKSQMLQAACNVAPRGV 475
Query: 545 FTTGQGASAVGLTAYVQRHPVSREWTLEAGALVLADRGVCLIDEFDKMNDQDRTSIHEAM 604
+ G + GLT + + S ++ LEAGALVL D+G+C IDEFDKM +Q + + EAM
Sbjct: 476 YVCGNTTTTSGLTVTLSKDSSSGDFALEAGALVLGDQGICGIDEFDKMGNQHQALL-EAM 534
Query: 605 EQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSLTFSENVDLTEPIISRFDILCVVR 664
EQQSIS++KAG+V SL AR ++IAAANP+GG Y+ + T SEN+ + ++SRFD++ ++
Sbjct: 535 EQQSISLAKAGVVCSLPARTSIIAAANPVGGHYNKAKTVSENLKMGSALLSRFDLVFILL 594
Query: 665 DTVDPVQDEMLARFVVG--------------SHVRHHPSNKEEEGLANGSAAEPAMPNTY 710
DT + D +L+ V+ + + SN + + +
Sbjct: 595 DTPNEHHDHLLSEHVIAIRAGKQRTISSATVARMNSQDSNTSVLEVVSEKPLSERLKVVP 654
Query: 711 G--VEPLPQEVLKKYIIYAKERVHPKLNQMDQDKVAKMYSDLRKESMATGSIPITVRHIE 768
G ++P+P ++L+KYI YA++ V+P+L+ + Y +LRK+S S PIT R +E
Sbjct: 655 GETIDPIPHQLLRKYIGYARQYVYPRLSTEAARVLQDFYLELRKQSQRLNSSPITTRQLE 714
Query: 769 SMIRMAEAHARIHLRDYVIEDDVNMAIRVMLESFIDT 805
S+IR+ EA AR+ LR+ ++D + +M S + T
Sbjct: 715 SLIRLTEARARLELREEATKEDAEDIVEIMKYSMLGT 751
>gi|33469922 minichromosome maintenance complex component 7 isoform
2 [Homo sapiens]
Length = 543
Score = 303 bits (775), Expect = 6e-82
Identities = 180/459 (39%), Positives = 272/459 (59%), Gaps = 39/459 (8%)
Query: 352 CP--ECQ---SAGPFEVNMEETIYQNYQRIRIQESPGKVAAGRLPRSKDAILLADLVDSC 406
CP ECQ S G + + + +Q +++QE +V G +PRS ++ +
Sbjct: 30 CPSQECQTNRSGGRLYLQTRGSRFIKFQEMKMQEHSDQVPVGNIPRSITVLVEGENTRIA 89
Query: 407 KPGDEIELTGIYHNNYDGSLNTANGFPVFATVILANHVAK----KDNKVAVGELTDEDVK 462
+PGD + +TGI+ + T + A+ + K +D++ GELT E+++
Sbjct: 90 QPGDHVSVTGIFLPILRTGFRQVVQGLLSETYLEAHRIVKMNKSEDDESGAGELTREELR 149
Query: 463 MITSLSKDQQIGEKIFASIAPSIYGHEDIKRGLALALFGGEPKNPGGKHKVRGDINVLLC 522
I ++ EK+ ASIAP IYGHED+K+ L L L GG ++P G K+RG+IN+ L
Sbjct: 150 QIA----EEDFYEKLAASIAPEIYGHEDVKKALLLLLVGGVDQSPRGM-KIRGNINICLM 204
Query: 523 GDPGTAKSQFLKYIEKVSSRAIFTTGQGASAVGLTAYVQRHPVSREWTLEAGALVLADRG 582
GDPG AKSQ L YI++++ R+ +TTG+G+S VGLTA V R VS E TLE GALVLAD+G
Sbjct: 205 GDPGVAKSQLLSYIDRLAPRSQYTTGRGSSGVGLTAAVLRDSVSGELTLEGGALVLADQG 264
Query: 583 VCLIDEFDKMNDQDRTSIHEAMEQQSISISKAGIVTSLQARCTVIAAANPIGGRYDPSLT 642
VC IDEFDKM + DRT+IHE MEQQ+ISI+KAGI+T+L ARC+++AAANP GRY+P +
Sbjct: 265 VCCIDEFDKMAEADRTAIHEVMEQQTISIAKAGILTTLNARCSILAAANPAYGRYNPRRS 324
Query: 643 FSENVDLTEPIISRFDILCVVRDTVDPVQDEMLARFV--VGSHVRHHPSNKEEEGLANGS 700
+N+ L ++SRFD+L +++D D D LA+ + V H R PS
Sbjct: 325 LEQNIQLPAALLSRFDLLWLIQDRPDRDNDLRLAQHITYVHQHSRQPPSQ---------- 374
Query: 701 AAEPAMPNTYGVEPLPQEVLKKYIIYAKERVHPKLNQMDQDKVAKMYSDLRKESMATGSI 760
EPL +++++YI +E+ P + + D + Y ++R+E+ A+
Sbjct: 375 -----------FEPLDMKLMRRYIAMCREK-QPMVPESLADYITAAYVEMRREAWASKDA 422
Query: 761 PIT-VRHIESMIRMAEAHARIHLRDYVIEDDVNMAIRVM 798
T R + +++R++ A AR+ + D V ++DVN AIR+M
Sbjct: 423 TYTSARTLLAILRLSTALARLRMVDVVEKEDVNEAIRLM 461
>gi|33469924 minichromosome maintenance complex component 8 isoform
2 [Homo sapiens]
Length = 824
Score = 301 bits (772), Expect = 1e-81
Identities = 222/751 (29%), Positives = 367/751 (48%), Gaps = 92/751 (12%)
Query: 125 GRGLGRMR---------RGLLYDSDEEDEERPARKRRQVERATEDGEE-------DEEMI 168
GRG GR R G E E RP + +R +E + + M
Sbjct: 7 GRGFGRGRFQSWKRGRGGGNFSGKWREREHRPDLSKTTGKRTSEQTPQFLLSTKTPQSMQ 66
Query: 169 ESIENLEDLKGHSV--REWVSMAGPRLEIHHRFKNFLRTHVDSHGHNVFKERISDMCKEN 226
+++ KG + E S + P +E F+ F H+D + K+ I E
Sbjct: 67 STLDRFIPYKGWKLYFSEVYSDSSPLIEKIQAFEKFFTRHIDLYD----KDEI-----ER 117
Query: 227 RESLVVNYEDLAAREHV------LAYFLPEAPAELLQIFDEAALEVVLAMYPKY------ 274
+ S++V++++L V +A L +AP + L A +V+ ++
Sbjct: 118 KGSILVDFKELTEGGEVTNLIPDIATELRDAPEKTLACMGLAIHQVLTKDLERHAAELQA 177
Query: 275 -DRITN---------HIHVRISHLPLVEELRSLRQLHLNQLIRTSGVVTSCTGVLPQLSM 324
+ ++N HIH R+ + + +L+++R + + I G V + + P +
Sbjct: 178 QEGLSNDGETMVNVPHIHARVYNYEPLTQLKNVRANYYGKYIALRGTVVRVSNIKPLCTK 237
Query: 325 VKYNCNKCNFVLGPFCQSQNQEVKPGSCPECQSAGPFEVNMEE---TIYQNYQRIRIQE- 380
+ + C C + F + P CP G + T+ ++Q I+IQE
Sbjct: 238 MAFLCAACGEIQS-FPLPDGKYSLPTKCPVPVCRGRSFTALRSSPLTVTMDWQSIKIQEL 296
Query: 381 -SPGKVAAGRLPRSKDAILLADLVDSCKPGDEIELTGIYHNNYDGSLNTANGFPVFATVI 439
S + AGR+PR+ + L+ DLVDSC PGD + +TGI + N+
Sbjct: 297 MSDDQREAGRIPRTIECELVHDLVDSCVPGDTVTITGIVKVSNAEEANS----------- 345
Query: 440 LANHVAKKDNKVAVG-------ELTDEDVKMITSLSKDQQIGEKIFASIAPSIYGHEDIK 492
++N +K G E + +D+ I + ++ + + I S+ P I+GHE +K
Sbjct: 346 ISNSKGQKTKSSEDGCKHGMLMEFSLKDLYAIQEIQAEENLFKLIVNSLCPVIFGHELVK 405
Query: 493 RGLALALFGGEPKNPGGKHKV--RGDINVLLCGDPGTAKSQFLKYIEKVSSRAIFTTGQG 550
GLALALFGG K K+++ RGD ++L+ GDPG KSQ L+ V+ R ++ G
Sbjct: 406 AGLALALFGGSQKYADDKNRIPIRGDPHILVVGDPGLGKSQMLQAACNVAPRGVYVCGNT 465
Query: 551 ASAVGLTAYVQRHPVSREWTLEAGALVLADRGVCLIDEFDKMNDQDRTSIHEAMEQQSIS 610
+ GLT + + S ++ LEAGALVL D+G+C IDEFDKM +Q + + EAMEQQSIS
Sbjct: 466 TTTSGLTVTLSKDSSSGDFALEAGALVLGDQGICGIDEFDKMGNQHQALL-EAMEQQSIS 524
Query: 611 ISKAGIVTSLQARCTVIAAANPIGGRYDPSLTFSENVDLTEPIISRFDILCVVRDTVDPV 670
++KAG+V SL AR ++IAAANP+GG Y+ + T SEN+ + ++SRFD++ ++ DT +
Sbjct: 525 LAKAGVVCSLPARTSIIAAANPVGGHYNKAKTVSENLKMGSALLSRFDLVFILLDTPNEH 584
Query: 671 QDEMLARFVVG--------------SHVRHHPSNKEEEGLANGSAAEPAMPNTYG--VEP 714
D +L+ V+ + + SN + + + G ++P
Sbjct: 585 HDHLLSEHVIAIRAGKQRTISSATVARMNSQDSNTSVLEVVSEKPLSERLKVVPGETIDP 644
Query: 715 LPQEVLKKYIIYAKERVHPKLNQMDQDKVAKMYSDLRKESMATGSIPITVRHIESMIRMA 774
+P ++L+KYI YA++ V+P+L+ + Y +LRK+S S PIT R +ES+IR+
Sbjct: 645 IPHQLLRKYIGYARQYVYPRLSTEAARVLQDFYLELRKQSQRLNSSPITTRQLESLIRLT 704
Query: 775 EAHARIHLRDYVIEDDVNMAIRVMLESFIDT 805
EA AR+ LR+ ++D + +M S + T
Sbjct: 705 EARARLELREEATKEDAEDIVEIMKYSMLGT 735
>gi|23397546 minichromosome maintenance complex component 9 [Homo
sapiens]
Length = 391
Score = 145 bits (366), Expect = 2e-34
Identities = 113/369 (30%), Positives = 183/369 (49%), Gaps = 37/369 (10%)
Query: 214 VFKERISDMCKENRESLVVNYEDLAAREHVLAYFLPEAPAELLQIFDEA----ALEVVLA 269
+ KER D +VVN L + + P+E+L IFD A AL ++ +
Sbjct: 28 ILKERDEDA----HYPVVVNAMTLFETNMEIGEYFNMFPSEVLTIFDSALRRSALTILQS 83
Query: 270 M-YPKYDRITNHIHVRISHLPLVEELRSLRQLHLNQLIRTSGVVTSCTGVLPQLSMVK-- 326
+ P+ + ++H RIS LP+ EL +R+ H+ + + G S TG + + S+VK
Sbjct: 84 LSQPEAVSMKQNLHARISGLPVCPEL--VRE-HIPKT-KDVGHFLSVTGTVIRTSLVKVL 139
Query: 327 -----YNCNKCN--FVLGPFCQSQNQEVKPGSCPECQSAGPFE------VNMEETIYQNY 373
Y CNKC FV+ + +P SCP +S + ++ T ++Y
Sbjct: 140 EFERDYMCNKCKHVFVIKADFEQYYTFCRPSSCPSLESCDSSKFTCLSGLSSSPTRCRDY 199
Query: 374 QRIRIQESPGKVAAGRLPRSKDAILLADLVDSCKPGDEIELTGIYHNNYDGSLNTANGFP 433
Q I+IQE +++ G +PRS IL DLVDSCK GD++ + GI +
Sbjct: 200 QEIKIQEQVQRLSVGSIPRSMKVILEDDLVDSCKSGDDLTIYGIVMQRWKPFQQDVR--- 256
Query: 434 VFATVILANHVAKKDNKVAVGELTDEDVKMITS-----LSKDQQIGEK-IFASIAPSIYG 487
++L + + +N+ + G + DE+V+ D G I AS+ P ++G
Sbjct: 257 CEVEIVLKANYIQVNNEQSSGIIMDEEVQKEFEDFWEYYKSDPFAGRNVILASLCPQVFG 316
Query: 488 HEDIKRGLALALFGGEPKNPGGKHKVRGDINVLLCGDPGTAKSQFLKYIEKVSSRAIFTT 547
+K +A+ L GG + +VRG+ ++LL GDPGT KSQFLKY K++ R++ TT
Sbjct: 317 MYLVKLAVAMVLAGGIQRTDATGTRVRGESHLLLVGDPGTGKSQFLKYAAKITPRSVLTT 376
Query: 548 GQGASAVGL 556
G G+++ G+
Sbjct: 377 GIGSTSAGI 385
>gi|4505101 microtubule-associated protein 7 [Homo sapiens]
Length = 749
Score = 44.7 bits (104), Expect = 4e-04
Identities = 47/175 (26%), Positives = 76/175 (43%), Gaps = 23/175 (13%)
Query: 11 ASSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESEGLLGTEGPLEEEEDGE 70
AS+PA + S+P + + ++ +S G P +E+ LL + L E+ +
Sbjct: 440 ASAPAPAPVPTPAMVSAPSSTVNASASVKTSAGTTDP---EEATRLLAEKRRLAREQREK 496
Query: 71 ELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQRDREAGRGLGR 130
E ER+ R EL+ + E LA EE T + E + R ++ RE L R
Sbjct: 497 E------ERERREQEELERQKREELA--QRVAEERTTRREEESRRLEAEQAREKEEQLQR 548
Query: 131 MRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEEMIESIENL-EDLKGHSVRE 184
+ EER R+R + ERA EE+ + E E + ++ + H RE
Sbjct: 549 -----------QAEERALREREEAERAQRQKEEEARVREEAERVRQEREKHFQRE 592
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 43.1 bits (100), Expect = 0.001
Identities = 38/118 (32%), Positives = 48/118 (40%), Gaps = 7/118 (5%)
Query: 50 EDESEGLLGTEGPLE-EEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTAS 108
E+E EG EG E EEE+GE G G E E + E EG D E E
Sbjct: 897 EEEGEGEGEEEGEGEGEEEEGE---GKGEEEGEEGEGEGEEEEGEGEGEDGEGEGEEEEG 953
Query: 109 QREAAERAMRQRDREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEE 166
+ E E E G G G G + +EE+ E + E E+GE +EE
Sbjct: 954 EWEGEEEEGEGEGEEEGEGEGEEGEG---EGEEEEGEGEGEEEEGEEEGEEEGEGEEE 1008
Score = 42.4 bits (98), Expect = 0.002
Identities = 35/117 (29%), Positives = 49/117 (41%), Gaps = 9/117 (7%)
Query: 50 EDESEGLLGTEGPLEEEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQ 109
E+E EG EG E E +GEE G+G E + E + E EG + + E +
Sbjct: 959 EEEGEG----EGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGE 1014
Query: 110 REAAERAMRQRDREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEE 166
E + + E G G G G +EE EER + R + EE+EE
Sbjct: 1015 EEEEGEVEGEVEGEEGEGEGEEEEG-----EEEGEEREKEGEGEENRRNREEEEEEE 1066
Score = 42.0 bits (97), Expect = 0.003
Identities = 37/122 (30%), Positives = 52/122 (42%), Gaps = 13/122 (10%)
Query: 50 EDESEGLLGTEGPLEE-----EEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDVEE 104
E+E EG EG EE EE+GEE G+G E + E + + EG ++E E
Sbjct: 905 EEEGEG----EGEEEEGEGKGEEEGEEGEGEGEEEE----GEGEGEDGEGEGEEEEGEWE 956
Query: 105 LTASQREAAERAMRQRDREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEED 164
+ E + + E G G G G +EE EE + E +GEE+
Sbjct: 957 GEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEE 1016
Query: 165 EE 166
EE
Sbjct: 1017 EE 1018
Score = 40.4 bits (93), Expect = 0.008
Identities = 38/121 (31%), Positives = 52/121 (42%), Gaps = 17/121 (14%)
Query: 50 EDESEGLLGTEGPLEEEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQ 109
E+E EG EG EEE +GEE G+G E + E + E EG +E+ EE +
Sbjct: 828 EEEEEG----EGE-EEEGEGEEEEGEGEEEEGEGKGEEEGEEGEG----EEEGEE---GE 875
Query: 110 REAAERAMRQRDREAGRGLGRMRRGLLYDSDE-----EDEERPARKRRQVERATEDGEED 164
E E E G G G G +E E+EE + + E +GEE+
Sbjct: 876 GEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEE 935
Query: 165 E 165
E
Sbjct: 936 E 936
Score = 38.1 bits (87), Expect = 0.037
Identities = 38/123 (30%), Positives = 52/123 (42%), Gaps = 6/123 (4%)
Query: 50 EDESEGLLGTEGPLEEEE---DGEEL-IGDGMERDYRAIPELDAYEAEGLALDDEDVEEL 105
E E EG EG EEEE +GEE G+G E + E + E EG ++E E
Sbjct: 882 EGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGEG 941
Query: 106 TASQREAAERAMR-QRDREAGRGLGRMR-RGLLYDSDEEDEERPARKRRQVERATEDGEE 163
+ E E + + E G G G G + + E EE + E E+GEE
Sbjct: 942 EDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEE 1001
Query: 164 DEE 166
+ E
Sbjct: 1002 EGE 1004
Score = 35.0 bits (79), Expect = 0.32
Identities = 53/198 (26%), Positives = 75/198 (37%), Gaps = 34/198 (17%)
Query: 22 DPLTSSPGRSSRRTDALTSSPGRDLPPFEDESEGLLGTEGPLEEEEDGEELIGDG-MERD 80
D S G++ +A GR E+ S G + EE E GE+ G G MER
Sbjct: 632 DKAEVSEGKAKSVGEAEDGPEGRGDGTCEEGSSGAEHWQD--EEREKGEKDKGRGEMERP 689
Query: 81 YRAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQRDREAG----RGLGRMRRGLL 136
EL AE D EE +RE + R ++ E G G G G
Sbjct: 690 GEGEKEL----AEKEEWKKRDGEEQEQKEREQGHQKERNQEMEEGGEEEHGEGEEEEG-- 743
Query: 137 YDSDEEDE------------------ERPARKRRQVERA--TEDGEEDEEMIESIENLED 176
D +EE+E E+ +R++ ERA E GEE+ + E E +
Sbjct: 744 -DREEEEEKEGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETE 802
Query: 177 LKGHSVREWVSMAGPRLE 194
+G E + G +E
Sbjct: 803 GRGEEKEEGGEVEGGEVE 820
Score = 35.0 bits (79), Expect = 0.32
Identities = 33/114 (28%), Positives = 52/114 (45%), Gaps = 21/114 (18%)
Query: 51 DESEGLLGTEGPLEEEEDGEELIGDGMERDYRAIP-ELDAYEAEGLALDDEDVEELTASQ 109
+E EG E E EE+GE G+G E + + E++ E EG ++E EE +
Sbjct: 991 EEEEGEEEGEEEGEGEEEGE---GEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEERE 1047
Query: 110 REAAERAMRQRDREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEE 163
+E E +R+RE +EE+EE ++ + E +DGEE
Sbjct: 1048 KE-GEGEENRRNRE----------------EEEEEEGKYQETGEEENERQDGEE 1084
Score = 34.7 bits (78), Expect = 0.41
Identities = 42/137 (30%), Positives = 55/137 (40%), Gaps = 19/137 (13%)
Query: 50 EDESEGLLGTEGPLEEEE---DGEELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELT 106
E E EG G EG EEEE +GEE G+G E + E + E EG + E E
Sbjct: 936 EGEGEGEDG-EGEGEEEEGEWEGEEEEGEG-EGEEEGEGEGEEGEGEGEEEEGEGEGEEE 993
Query: 107 ASQREAAERAMRQRDREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEE 166
+ E E E G G G EE+EE + E +GEE+E
Sbjct: 994 EGEEEGEEEG---EGEEEGEGEG-----------EEEEEGEVEGEVEGEEGEGEGEEEEG 1039
Query: 167 MIESIENLEDLKGHSVR 183
E E ++ +G R
Sbjct: 1040 EEEGEEREKEGEGEENR 1056
Score = 30.8 bits (68), Expect = 5.9
Identities = 29/120 (24%), Positives = 48/120 (40%), Gaps = 1/120 (0%)
Query: 66 EEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQRDREAG 125
EE+G++ G+ E + R + + E EG +++ E + E + + E G
Sbjct: 788 EEEGDQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEG 847
Query: 126 RGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGE-EDEEMIESIENLEDLKGHSVRE 184
G G + EE E + + E E+GE E EE E E+ +G E
Sbjct: 848 EGEEEEGEGKGEEEGEEGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEE 907
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 42.7 bits (99), Expect = 0.002
Identities = 41/128 (32%), Positives = 58/128 (45%), Gaps = 8/128 (6%)
Query: 50 EDESEGLLGTEGPLEEEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQ 109
+ E EG T+G EE ED E G G + + E+ A + E + E T SQ
Sbjct: 778 QPEGEGETETQGKGEECEDENEAEGKG-DNEGEDEGEIHAEDGEMKGNEGE-----TESQ 831
Query: 110 REAAERAMRQRDREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEEMIE 169
+AE ++ E G G G DS+EE+EE ++ + E E+ EE+EE E
Sbjct: 832 ELSAENHGEAKNDEKGVEDGGGSDG--GDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEE 889
Query: 170 SIENLEDL 177
N E L
Sbjct: 890 EKGNEEPL 897
>gi|90819233 myeloid/lymphoid or mixed-lineage leukemia (trithorax
homolog, Drosophila); translocated to, 4 isoform 2 [Homo
sapiens]
Length = 1651
Score = 40.4 bits (93), Expect = 0.008
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 98 DDEDVEELTASQREAAERAMRQRDREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERA 157
+D+DV+ + QR AER R +R + L MR+ D ++EE R+R++ ER
Sbjct: 1584 EDDDVDTMLIMQRLEAERRARDEERRRQQQLEEMRKREAEDRARQEEE---RRRQEEERT 1640
Query: 158 TEDGEE 163
D EE
Sbjct: 1641 KRDAEE 1646
>gi|17975763 myelin transcription factor 1 [Homo sapiens]
Length = 1121
Score = 40.4 bits (93), Expect = 0.008
Identities = 44/181 (24%), Positives = 71/181 (39%), Gaps = 8/181 (4%)
Query: 13 SPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESEGLLGTEGPLEEEEDGEEL 72
SP + G++P+ S+ S + L G + E +EE+
Sbjct: 135 SPVKSHFGSNPIGSATASSKGSYSSYQGIIATSLLNL-----GQIAEETLVEEDLGQAAK 189
Query: 73 IGDGMERDYRAIPELDAYEA--EGLALDDEDVEELTASQREAAERAMRQRDREAGRGLGR 130
G G+ + E A E +GL + ED EE+ E ++ Q +A
Sbjct: 190 PGPGIVHLLQEAAEGAASEEGEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESS 249
Query: 131 MRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEEMIESIENLEDLKGHSVREWVSMAG 190
++G+L +EEDEE + + E E+ EE+EE E E E+ + E A
Sbjct: 250 KQKGIL-SHEEEDEEEEEEEEEEEEDEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAA 308
Query: 191 P 191
P
Sbjct: 309 P 309
Score = 37.0 bits (84), Expect = 0.083
Identities = 32/141 (22%), Positives = 56/141 (39%), Gaps = 26/141 (18%)
Query: 58 GTEGPLEEEEDGEELIGDGMERDYRAIPEL-------DAYEAEGLALDDEDVEELTASQR 110
G +G + ED EE++ ER P+ ++ + +G+ +E+ EE
Sbjct: 210 GEKGLFIQPEDAEEVVEVTTERSQDLCPQSLEDAASEESSKQKGILSHEEEDEE------ 263
Query: 111 EAAERAMRQRDREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEEMIES 170
E E + D E + +EE+EE + + E E+ EE+EE
Sbjct: 264 EEEEEEEEEEDEEE-------------EEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAPD 310
Query: 171 IENLEDLKGHSVREWVSMAGP 191
+ ED S ++ + GP
Sbjct: 311 VIFQEDTSHTSAQKAPELRGP 331
>gi|16262452 cingulin [Homo sapiens]
Length = 1203
Score = 39.7 bits (91), Expect = 0.013
Identities = 46/155 (29%), Positives = 69/155 (44%), Gaps = 33/155 (21%)
Query: 56 LLGTEGPLEEEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQRE---- 111
+LG E L+E L+ G + R +L EAE L+ E L ASQ E
Sbjct: 739 ILGLEQQLKETRG---LVDGGEAVEARLRDKLQRLEAEKQQLE----EALNASQEEEGSL 791
Query: 112 -AAERAMRQRDREAGRGLGRM----------------RRGLLYDSDEEDEERPARKRRQV 154
AA+RA+ R EA RGL R+ +R +L E EE+ R V
Sbjct: 792 AAAKRALEARLEEAQRGLARLGQEQQTLNRALEEEGKQREVLRRGKAELEEQKRLLDRTV 851
Query: 155 ERATED----GEEDEEMIESIE-NLEDLKGHSVRE 184
+R ++ GE+ ++ ++ ++ LED K + RE
Sbjct: 852 DRLNKELEKIGEDSKQALQQLQAQLEDYKEKARRE 886
Score = 31.6 bits (70), Expect = 3.5
Identities = 41/173 (23%), Positives = 73/173 (42%), Gaps = 27/173 (15%)
Query: 56 LLGTEGPLEEEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDE-----------DVEE 104
LL T LEE +G++ + + + R + L E +A D+ D E+
Sbjct: 469 LLETRELLEEVLEGKQRVEEQLRLRERELTALKGALKEEVASRDQEVEHVRQQYQRDTEQ 528
Query: 105 LTASQREAA-ERAMRQRDREAGRGLGRMRRGLLYDSDEE-----------DEERPARKRR 152
L S ++A + A+ + +R+ L R + L ++ EE E+ A K+
Sbjct: 529 LRRSMQDATQDHAVLEAERQKMSALVRGLQRELEETSEETGHWQSMFQKNKEDLRATKQE 588
Query: 153 QVERATEDGEEDEEMIESIENLEDLKGHSVREWVSMAGPRLEIHHRFKNFLRT 205
++ E E +EE+ E IE L+ + + + AG ++ K LRT
Sbjct: 589 LLQLRMEKEEMEEELGEKIEVLQ----RELEQARASAGDTRQVEVLKKELLRT 637
>gi|155030232 proline, glutamic acid and leucine rich protein 1
[Homo sapiens]
Length = 1130
Score = 39.3 bits (90), Expect = 0.017
Identities = 44/169 (26%), Positives = 64/169 (37%), Gaps = 24/169 (14%)
Query: 11 ASSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGR-DLPPFEDESEGLLGTEGPLEEEEDG 69
AS P + + L ++PG PG LPP + EG G GP EED
Sbjct: 819 ASPPVPAKEEPEELPAAPGPLPPPPPPPPPVPGPVTLPPPQLVPEGTPGGGGPPALEED- 877
Query: 70 EELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQRDREAGRGLG 129
+I + E + E E ++ED EE + E E
Sbjct: 878 LTVININSSDEEEEEEEEEEEEEEEEEEEEEDFEEEEEDEEEYFEE-------------- 923
Query: 130 RMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEEMIESIENLEDLK 178
+ +EE+E + + E E+ EEDEE E +E +EDL+
Sbjct: 924 --------EEEEEEEFEEEFEEEEGELEEEEEEEDEEEEEELEEVEDLE 964
>gi|31377595 zinc finger CCCH-type containing 18 [Homo sapiens]
Length = 953
Score = 39.3 bits (90), Expect = 0.017
Identities = 40/121 (33%), Positives = 55/121 (45%), Gaps = 9/121 (7%)
Query: 59 TEGPLEEEEDG--EELIGDGMERDYRAIPELDAYEAEGLALDDEDVEE-LTASQREAAER 115
T P EEE D E+ D + ELD +E L D+E EE A Q + AE+
Sbjct: 93 TSSPCEEEGDEGEEDRTSDLRDEASSVTRELDEHE---LDYDEEVPEEPAPAVQEDEAEK 149
Query: 116 AMRQRDREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEEMIESIENLE 175
A + D E G G R S E E A K ++ E +DGE D+ I+ ++LE
Sbjct: 150 AGAEDDEEKGEGTPREEGKAGVQSVGEKESLEAAKEKKKE--DDDGEIDDGEIDD-DDLE 206
Query: 176 D 176
+
Sbjct: 207 E 207
Score = 32.0 bits (71), Expect = 2.7
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 11/113 (9%)
Query: 64 EEEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQRE------AAERAM 117
E+EE + L D + RD + +LD L+DE+ SQ E +RA
Sbjct: 15 EDEEQPQGLSDDDILRDSGSDQDLDGAGVRASDLEDEESAARGPSQEEEDNHSDEEDRAS 74
Query: 118 RQRDREAGRGLGRMRRG-----LLYDSDEEDEERPARKRRQVERATEDGEEDE 165
+ ++ + + RG + DE +E+R + R + T + +E E
Sbjct: 75 EPKSQDQDSEVNELSRGPTSSPCEEEGDEGEEDRTSDLRDEASSVTRELDEHE 127
Score = 32.0 bits (71), Expect = 2.7
Identities = 38/141 (26%), Positives = 50/141 (35%), Gaps = 30/141 (21%)
Query: 50 EDESEGLLGTEGPLEEEEDG----EELIGDGMERDYRAI-------PELDAYEAEGLALD 98
EDE GP +EEED E+ + +D + P E EG
Sbjct: 49 EDEESA---ARGPSQEEEDNHSDEEDRASEPKSQDQDSEVNELSRGPTSSPCEEEG---- 101
Query: 99 DEDVEELTASQREAAERAMRQRDREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERAT 158
DE E+ T+ R+ A R+ D D DEE E PA ++ E
Sbjct: 102 DEGEEDRTSDLRDEASSVTRELDEHE------------LDYDEEVPEEPAPAVQEDEAEK 149
Query: 159 EDGEEDEEMIESIENLEDLKG 179
E+DEE E E G
Sbjct: 150 AGAEDDEEKGEGTPREEGKAG 170
Score = 30.8 bits (68), Expect = 5.9
Identities = 18/53 (33%), Positives = 26/53 (49%)
Query: 114 ERAMRQRDREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEE 166
E R+R+RE R R RR + + E E R+RR+ E E + DE+
Sbjct: 411 ENRQRERERERERDRERERRQREREREREHERDKERQRRKEEWERERAKRDEK 463
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 38.9 bits (89), Expect = 0.022
Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 19/174 (10%)
Query: 63 LEEEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQRDR 122
L+EEE EEL + E+ R E E E L ++ E+L +RE R R+R
Sbjct: 906 LQEEE--EELQREEREKRRRQEQERQYREEEQL---QQEEEQLLREEREKRRRQERERQY 960
Query: 123 EAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEEMIESIENLEDLKGHSV 182
+ L + LL EE E+R ++R + R E+ +++EE + E+ +
Sbjct: 961 RKDKKLQQKEEQLL---GEEPEKRRRQEREKKYREEEELQQEEEQLLR----EEREKRRR 1013
Query: 183 REWVSMAGPRLEIHHRFKNFLRTHVDSHGHNVFKERISDMCKENRESLVVNYED 236
+EW + E+ + LR + K R+ + ++ RE + E+
Sbjct: 1014 QEWERQYRKKDELQQEEEQLLREERE-------KRRLQERERQYREEEELQQEE 1060
Score = 34.3 bits (77), Expect = 0.54
Identities = 38/154 (24%), Positives = 60/154 (38%), Gaps = 21/154 (13%)
Query: 44 RDLPPFEDESEGLLGTEGPLEEEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDE--- 100
R+ + E E LLG E ++ +ER YR EL E + L + E
Sbjct: 1051 REEEELQQEEEQLLGEERETRRRQE--------LERQYRKEEELQQEEEQLLREEPEKRR 1102
Query: 101 ------DVEELTASQREAAERAMRQRDREAGRGLGRMRRGLLYDSDEED----EERPARK 150
E Q+E + +R++ + L R R EE+ EE R+
Sbjct: 1103 RQERERQCREEEELQQEEEQLLREEREKRRRQELERQYREEEEVQQEEEQLLREEPEKRR 1162
Query: 151 RRQVERATEDGEEDEEMIESIENLEDLKGHSVRE 184
R+++ER + EE ++ E + E K RE
Sbjct: 1163 RQELERQYREEEELQQEEEQLLREEQEKRRQERE 1196
Score = 33.5 bits (75), Expect = 0.92
Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 64 EEEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQRDRE 123
E+EE ++L+ ER + + E L E+VE L Q E E+ +++ + E
Sbjct: 570 EQEERRDQLLKREEERRQQRLKREQEERLEQ-RLKREEVERL--EQEERREQRLKREEPE 626
Query: 124 AGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATED---GEEDEEMIE 169
RR L S+E++E R + RR+ + E EE+EE +E
Sbjct: 627 ------EERRQQLLKSEEQEERRQQQLRREQQERREQRLKREEEEERLE 669
Score = 32.7 bits (73), Expect = 1.6
Identities = 27/111 (24%), Positives = 49/111 (44%), Gaps = 16/111 (14%)
Query: 66 EEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDV--EELTASQREAAERAMRQRDRE 123
++ E+L+G+ E+ R E E E L ++E + EE +R+ ER R++D
Sbjct: 967 QQKEEQLLGEEPEKRRRQEREKKYREEEELQQEEEQLLREEREKRRRQEWERQYRKKDE- 1025
Query: 124 AGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEEMIESIENL 174
+EE R R++R+++ E+EE+ + E L
Sbjct: 1026 -------------LQQEEEQLLREEREKRRLQERERQYREEEELQQEEEQL 1063
Score = 31.6 bits (70), Expect = 3.5
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 17/168 (10%)
Query: 24 LTSSPGRSSRRTDALTSSPGRDLPPFEDESEGLLGTEGPLEEEEDGE--ELIGDGMERDY 81
L PG+ R+ R+L E++SE E + D E + ER+
Sbjct: 129 LEEEPGQRRRQK---RQEQERELAEGEEQSEKQERLEQRDRQRRDEELWRQRQEWQEREE 185
Query: 82 RAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQRDREAGRGLGRMRRGLLYDSDE 141
R E +G ++ EE +RE E +R++ RE + R R+ ++ +
Sbjct: 186 RRAEEEQLQSCKGHETEEFPDEE-QLRRRELLE--LRRKGREEKQQQRRERQDRVF---Q 239
Query: 142 EDEERPARKRRQVERATEDGEEDE------EMIESIENLEDLKGHSVR 183
E+EE+ RKR V R E+ ++E E+ E E L L+ +R
Sbjct: 240 EEEEKEWRKRETVLRKEEEKLQEEEPQRQRELQEEEEQLRKLERQELR 287
Score = 31.2 bits (69), Expect = 4.6
Identities = 24/92 (26%), Positives = 38/92 (41%), Gaps = 15/92 (16%)
Query: 81 YRAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQRDREAGRGLGRMRRGLLYDSD 140
Y A+ + + E A D L ++E +R RDR+ +
Sbjct: 86 YYALGQATGLDEEKRARCDGKESLLQDRRQEEDQRRFEPRDRQL---------------E 130
Query: 141 EEDEERPARKRRQVERATEDGEEDEEMIESIE 172
EE +R +KR++ ER +GEE E E +E
Sbjct: 131 EEPGQRRRQKRQEQERELAEGEEQSEKQERLE 162
Score = 31.2 bits (69), Expect = 4.6
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 109 QREAAERAMRQRDREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEEM 167
QR +A +R++ R R +R + +EE++E+ R+RR+ E+ + EE+E++
Sbjct: 782 QRLSARPPLREQRERQLRAEERQQREQRFLPEEEEKEQRRRQRREREKELQFLEEEEQL 840
Score = 30.8 bits (68), Expect = 5.9
Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 97 LDDEDVEELTASQREAAE-RAMRQRDREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVE 155
L ++ +L A +R+ E R + + + + R R R EE+E+ R+R Q
Sbjct: 790 LREQRERQLRAEERQQREQRFLPEEEEKEQRRRQRREREKELQFLEEEEQLQRRERAQQL 849
Query: 156 RATEDG-EEDEEMIESIENLEDLK 178
+ EDG +ED+E S E D K
Sbjct: 850 QEEEDGLQEDQERRRSQEQRRDQK 873
>gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]
Length = 1113
Score = 38.9 bits (89), Expect = 0.022
Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 9/116 (7%)
Query: 78 ERDYRAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQRDREAGRGLGRMRRGLLY 137
E + ++ L + GL+ + ++E +RE R+R+ + R R R
Sbjct: 205 ELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKE 264
Query: 138 DSDEEDEERPARKRRQVERATEDGEEDEEMIES---------IENLEDLKGHSVRE 184
E++ ER + R++ER E ++E++ + + L L+GH+ E
Sbjct: 265 REQEKEREREKERERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEE 320
>gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]
Length = 1217
Score = 38.9 bits (89), Expect = 0.022
Identities = 25/116 (21%), Positives = 50/116 (43%), Gaps = 9/116 (7%)
Query: 78 ERDYRAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQRDREAGRGLGRMRRGLLY 137
E + ++ L + GL+ + ++E +RE R+R+ + R R R
Sbjct: 309 ELSHSSLAALHSERMSGLSAERLQMDEELRREREREREREREREADREREKEREREREKE 368
Query: 138 DSDEEDEERPARKRRQVERATEDGEEDEEMIES---------IENLEDLKGHSVRE 184
E++ ER + R++ER E ++E++ + + L L+GH+ E
Sbjct: 369 REQEKEREREKERERELERQREQRAREKELLAAKALEPSFLPVAELHGLRGHATEE 424
>gi|13540523 nucleosomal binding protein 1 [Homo sapiens]
Length = 282
Score = 38.5 bits (88), Expect = 0.029
Identities = 39/184 (21%), Positives = 74/184 (40%), Gaps = 34/184 (18%)
Query: 14 PAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESEGLLGTEGPLEEE------- 66
P ++ G + P R S R A+ ++ P S + T+ + EE
Sbjct: 2 PKRKAAGQGDMRQEPKRRSARLSAMLVPVTPEVKPKRTSSSRKMKTKSDMMEENIDTSAQ 61
Query: 67 ---EDGEELIGDGMERDYRA--------IPELDAYEAEGLALDDEDVEELT---ASQREA 112
E +E + +E DY I E A E E + + +E++E+ T ++EA
Sbjct: 62 AVAETKQEAV---VEEDYNENAKNGEAKITEAPASEKEIVEVKEENIEDATEKGGEKKEA 118
Query: 113 AERAMRQRDREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEEMIESIE 172
++ + + + D+ +E+ A K + E+ EDG+ED+ E E
Sbjct: 119 VAAEVKNEEEDQKED----------EEDQNEEKGEAGKEDKDEKGEEDGKEDKNGNEKGE 168
Query: 173 NLED 176
+ ++
Sbjct: 169 DAKE 172
Score = 37.4 bits (85), Expect = 0.064
Identities = 35/130 (26%), Positives = 61/130 (46%), Gaps = 4/130 (3%)
Query: 50 EDESEGLLGTEGPLEE-EEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTAS 108
++E +G G E E+ EEDG+E +G E+ A + D + E + ED +E
Sbjct: 137 QNEEKGEAGKEDKDEKGEEDGKE-DKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGED 195
Query: 109 QREAAERAMRQ--RDREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEE 166
++E +R ++ E G+ G + G E+++ER K + E G+E E+
Sbjct: 196 EKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVKEDEKEREDGKEDEGGNEEEAGKEKED 255
Query: 167 MIESIENLED 176
+ E E E+
Sbjct: 256 LKEEEEGKEE 265
>gi|239757964 PREDICTED: hypothetical protein [Homo sapiens]
Length = 290
Score = 38.5 bits (88), Expect = 0.029
Identities = 30/106 (28%), Positives = 44/106 (41%), Gaps = 3/106 (2%)
Query: 63 LEEEEDGEELIGDGMERDYRAIPELDA---YEAEGLALDDEDVEELTASQREAAERAMRQ 119
+E + + E+ G ERD E D E E D D + T ++RE +Q
Sbjct: 121 IERDREREKQKGRERERDRGRERERDRDREKERERQTEKDRDGQRETETERERDREREKQ 180
Query: 120 RDREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDE 165
++RE R R R + D ER +++ Q ER E E E
Sbjct: 181 KERETERDRDRQRDTEKERERQTDRERDRQRKTQTERQRETDREGE 226
Score = 33.9 bits (76), Expect = 0.70
Identities = 24/77 (31%), Positives = 35/77 (45%), Gaps = 18/77 (23%)
Query: 109 QREAAERAMRQRDREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGEEDEEMI 168
+RE R RQRDR+ G+ E D ER ++ R+ ER E +E +E
Sbjct: 226 ERETDRRRERQRDRDRGK--------------ERDRERDRKEERKKERKKERKKERKEKK 271
Query: 169 ESIENLEDLKGHSVREW 185
+ + ED K R+W
Sbjct: 272 KEEKRREDKK----RKW 284
Score = 31.2 bits (69), Expect = 4.6
Identities = 32/125 (25%), Positives = 53/125 (42%), Gaps = 13/125 (10%)
Query: 51 DESEGLLGTE------GPLEEEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDED--- 101
D S G LG++ G + +D + GD +R+ + E E + D +
Sbjct: 48 DFSRGRLGSQESPRSWGLGQAHKDAD---GDDRQRERDRVREKTEKERDRDRKRDRERRR 104
Query: 102 VEELTASQREAAERAMRQRDREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDG 161
E+ T R+ ++ +RDRE + GR R E D +R + RQ E+ DG
Sbjct: 105 KEKETNRNRDREKQTEIERDREREKQKGRERERDRGRERERDRDREKERERQTEK-DRDG 163
Query: 162 EEDEE 166
+ + E
Sbjct: 164 QRETE 168
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 38.5 bits (88), Expect = 0.029
Identities = 45/182 (24%), Positives = 72/182 (39%), Gaps = 16/182 (8%)
Query: 20 GNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESEGLLGTEGPLEEEEDGEELIGDGMER 79
G + S G ++ + T D P D G E P E EE+ +E G+ E
Sbjct: 2022 GVEAQPKSEGEEAQEVEGETQKTEGDAQPESD------GVEAP-EAEEEAQEAEGEVQEA 2074
Query: 80 DYRAIPE---LDAYEAEGLALDDEDVEELTASQREAAERAMRQRDREAGRGLGRMRRGLL 136
+ A PE +DA EAEG A + + E ++ EA + + G +
Sbjct: 2075 EGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQPESEG--I 2132
Query: 137 YDSDEEDEERPARKRRQVERATEDGEEDEEMIESIENLE----DLKGHSVREWVSMAGPR 192
+ E E +P + + + A + + + E IE+ E E +L+G E A P
Sbjct: 2133 EAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQPELEGVEAPEAEGEAQPE 2192
Query: 193 LE 194
E
Sbjct: 2193 SE 2194
>gi|149999615 variable charge, X-linked 3B [Homo sapiens]
Length = 216
Score = 38.5 bits (88), Expect = 0.029
Identities = 41/152 (26%), Positives = 59/152 (38%), Gaps = 10/152 (6%)
Query: 26 SSPGRSSRRTDALTSSPGRDLPPFEDESEGLLGTEGPLEEEEDGEELIGDGMERDYRAIP 85
++PG S + + L P +LPP E SEG PL +E + EE + E +
Sbjct: 72 AAPGPSDQPSQEL---PQHELPPEEPVSEGT--QHDPLSQESELEEPLSQESEVEEPLSQ 126
Query: 86 ELDAYEAEGLALDDEDVEELTASQREAAERAMRQRDREAGRGLGRMRRGLLYDSDEEDEE 145
E E L E E SQ E + Q + E L + + S E + E
Sbjct: 127 ESQVEEP----LSQESEVEEPLSQESQVEEPLSQ-ESEVEEPLSQESQVEEPLSQESEME 181
Query: 146 RPARKRRQVERATEDGEEDEEMIESIENLEDL 177
P + QVE E EE + +E+L
Sbjct: 182 EPLSQESQVEEPLSQESEMEEPLSQESEMEEL 213
>gi|7662238 apoptotic chromatin condensation inducer 1 [Homo
sapiens]
Length = 1341
Score = 38.1 bits (87), Expect = 0.037
Identities = 46/169 (27%), Positives = 71/169 (42%), Gaps = 33/169 (19%)
Query: 12 SSPAQRRRGNDPLTSSPGRSSR-RTDALTSSPGRDLPPFEDESEGLLGTEGPLEEEEDGE 70
S PA+ + +P R+ R R D R+L E+E E EEEED E
Sbjct: 243 SQPAEEEEDQE----TPSRNLRVRAD-------RNLKTEEEEEE-------EEEEEEDDE 284
Query: 71 ELIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQRDREAGRGLGR 130
E GD + R P L ++ EG EE+ R E M +R + +
Sbjct: 285 EEEGDDEGQKSREAPILKEFKEEG--------EEIP---RVKPEEMMDERPKTRSQEQEV 333
Query: 131 MRRGLLYDSDEEDEERPARKRRQVE---RATEDGEEDEEMIESIENLED 176
+ RG + +E+ + R+Q E + T EE+E I+S + L++
Sbjct: 334 LERGGRFTRSQEEARKSHLARQQQEKEMKTTSPLEEEEREIKSSQGLKE 382
Score = 32.7 bits (73), Expect = 1.6
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 1/78 (1%)
Query: 103 EELTASQREAAERAMRQRDREAGRGLGRMRRGLLYDSDEEDEERPARKRR-QVERATEDG 161
EE S E + R+ R ++ G +EED+E P+R R + +R +
Sbjct: 211 EEKGDSDDEKPRKGERRSSRVRQARAAKLSEGSQPAEEEEDQETPSRNLRVRADRNLKTE 270
Query: 162 EEDEEMIESIENLEDLKG 179
EE+EE E E+ E+ +G
Sbjct: 271 EEEEEEEEEEEDDEEEEG 288
Score = 30.8 bits (68), Expect = 5.9
Identities = 32/124 (25%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 65 EEEDGEELIGDGMERDYRA-----IPELDAYEAEGLALDDEDVEELTASQREAAERAMRQ 119
+EE +L+ D + A +P D+ + A E +E ++E E ++
Sbjct: 1203 QEEPPAKLLDDLFRKTKAAPCIYWLPLTDSQIVQKEAERAERAKEREKRRKEQEEEEQKE 1262
Query: 120 RDREAGRGLGRM--RRGLLYDSDEEDEERPARKRRQVERATEDGEEDEEMIESIENLEDL 177
R++EA R R R S E D ER + R D E D E + D
Sbjct: 1263 REKEAERERNRQLEREKRREHSRERDRERERERERDRGDRDRDRERDRERGRE-RDRRDT 1321
Query: 178 KGHS 181
K HS
Sbjct: 1322 KRHS 1325
>gi|17136078 VGF nerve growth factor inducible precursor [Homo
sapiens]
Length = 615
Score = 38.1 bits (87), Expect = 0.037
Identities = 40/138 (28%), Positives = 57/138 (41%), Gaps = 30/138 (21%)
Query: 43 GRDLPPFEDESEGLLGTEGPLEEEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDEDV 102
GR L +E E E +E GEE +G+ E + A E +A EAE
Sbjct: 348 GRGLQEAAEERESAREEEEAEQERRGGEERVGE--EDEEAAEAEAEAEEAE--------- 396
Query: 103 EELTASQREAAERAMRQRDREAGRGLGRMRRGLLYDSDEEDEERPARKRRQVERATEDGE 162
R+ A + D EAG + EE P +R++ E E GE
Sbjct: 397 -----RARQNALLFAEEEDGEAGA-----------EDKRSQEETPGHRRKEAEGTEEGGE 440
Query: 163 E--DEEM-IESIENLEDL 177
E DEEM ++I++L +L
Sbjct: 441 EEDDEEMDPQTIDSLIEL 458
>gi|116008442 zinc finger CCCH-type containing 13 [Homo sapiens]
Length = 1564
Score = 38.1 bits (87), Expect = 0.037
Identities = 46/165 (27%), Positives = 61/165 (36%), Gaps = 14/165 (8%)
Query: 12 SSPAQRRRGNDPLTSSPGRSSRRTDALTSSPGRDLPPFEDESEGLLGTEGPLEEEEDGEE 71
SSP + + ND L R RR D + + E E E E E D E
Sbjct: 642 SSPIRHQGRNDELERDERREERRVDRVDDRRDERARERDRERERDRERERERERERDRER 701
Query: 72 LIGDGMERDYRAIPELDAYEAEGLALDDEDVEELTASQREAAERAMRQRDREAGRGLGRM 131
+ER+ RA E E D D + +RE R+RDRE R R
Sbjct: 702 EKERELERE-RAREREREREKERDRERDRDRDHDRERERE------RERDREKERERERE 754
Query: 132 RRGLLYDSDEEDEERPARKRRQVERATEDGEEDEEMIESIENLED 176
R E + ER + R+ ER E E ++ E + ED
Sbjct: 755 ER-------ERERERERERERERERERERARERDKERERQRDWED 792
>gi|6005757 chromatin-specific transcription elongation factor large
subunit [Homo sapiens]
Length = 1047
Score = 37.7 bits (86), Expect = 0.049
Identities = 30/120 (25%), Positives = 51/120 (42%), Gaps = 12/120 (10%)
Query: 43 GRDLPPFEDESEGLLGTEGPLEEEEDGEELIGDGMERDYRAIPELDAYEAEGLALDDE-- 100
G D + ESE T P E++ + EE + + DY + E Y E L ++E
Sbjct: 931 GSDAEEGDSESEIEDETFNPSEDDYEEEE---EDSDEDYSSEAEESDYSKESLGSEEESG 987
Query: 101 -DVEELTASQREAAERAMRQRDREAGRGLGRMRRGLLYDS------DEEDEERPARKRRQ 153
D +EL R+A + + + E R + R R+ ++ S P +K+R+
Sbjct: 988 KDWDELEEEARKADRESRYEEEEEQSRSMSRKRKASVHSSGRGSNRGSRHSSAPPKKKRK 1047
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.317 0.134 0.380
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 33,781,411
Number of Sequences: 37866
Number of extensions: 1594834
Number of successful extensions: 8926
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 222
Number of HSP's that attempted gapping in prelim test: 7684
Number of HSP's gapped (non-prelim): 1049
length of query: 904
length of database: 18,247,518
effective HSP length: 111
effective length of query: 793
effective length of database: 14,044,392
effective search space: 11137202856
effective search space used: 11137202856
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 67 (30.4 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.